AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002483.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002483.01.T01 MTR_1g050340 94.069 607 8 3 1 604 1 582 0.0 1155
MsG0180002483.01.T01 MTR_1g050340 93.914 608 8 4 1 604 1 583 0.0 1151
MsG0180002483.01.T01 MTR_7g058460 60.591 609 204 11 2 607 8 583 0.0 652
MsG0180002483.01.T01 MTR_7g058440 58.717 608 208 10 2 607 8 574 0.0 619
MsG0180002483.01.T01 MTR_4g113080 32.761 641 323 20 12 623 35 596 2.09e-69 240
MsG0180002483.01.T01 MTR_3g107910 52.511 219 84 5 394 601 482 691 3.99e-54 199
MsG0180002483.01.T01 MTR_3g107910 77.778 81 18 0 1 81 1 81 5.12e-37 148
MsG0180002483.01.T01 MTR_3g107910 52.511 219 84 5 394 601 489 698 4.13e-54 199
MsG0180002483.01.T01 MTR_3g107910 77.778 81 18 0 1 81 1 81 5.27e-37 148
MsG0180002483.01.T01 MTR_1g011610 77.778 81 18 0 1 81 1 81 5.72e-37 148
MsG0180002483.01.T01 MTR_1g011610 37.302 252 103 16 144 365 171 397 1.58e-19 93.6
MsG0180002483.01.T01 MTR_1g011610 77.778 81 18 0 1 81 1 81 7.15e-37 147
MsG0180002483.01.T01 MTR_1g011610 37.302 252 103 16 144 365 171 397 1.69e-19 93.6
MsG0180002483.01.T01 MTR_2g014020 49.600 125 58 2 483 603 197 320 1.37e-31 127
MsG0180002483.01.T01 MTR_2g014020 50.407 123 56 2 483 601 197 318 1.06e-30 127
MsG0180002483.01.T01 MTR_4g088670 45.652 92 43 2 518 602 11 102 5.87e-14 73.6
MsG0180002483.01.T01 MTR_4g088665 43.529 85 47 1 518 602 89 172 7.85e-13 70.9
MsG0180002483.01.T01 MTR_4g088620 46.970 66 35 0 537 602 36 101 9.70e-12 67.0
MsG0180002483.01.T01 MTR_4g088625 46.575 73 39 0 530 602 22 94 1.20e-11 66.6
MsG0180002483.01.T01 MTR_4g088640 44.186 86 47 1 517 602 94 178 3.51e-11 65.9
MsG0180002483.01.T02 MTR_1g050340 94.069 607 8 3 1 604 1 582 0.0 1155
MsG0180002483.01.T02 MTR_1g050340 93.914 608 8 4 1 604 1 583 0.0 1151
MsG0180002483.01.T02 MTR_7g058460 60.591 609 204 11 2 607 8 583 0.0 652
MsG0180002483.01.T02 MTR_7g058440 58.717 608 208 10 2 607 8 574 0.0 619
MsG0180002483.01.T02 MTR_4g113080 32.761 641 323 20 12 623 35 596 2.09e-69 240
MsG0180002483.01.T02 MTR_3g107910 52.511 219 84 5 394 601 482 691 3.99e-54 199
MsG0180002483.01.T02 MTR_3g107910 77.778 81 18 0 1 81 1 81 5.12e-37 148
MsG0180002483.01.T02 MTR_3g107910 52.511 219 84 5 394 601 489 698 4.13e-54 199
MsG0180002483.01.T02 MTR_3g107910 77.778 81 18 0 1 81 1 81 5.27e-37 148
MsG0180002483.01.T02 MTR_1g011610 77.778 81 18 0 1 81 1 81 5.72e-37 148
MsG0180002483.01.T02 MTR_1g011610 37.302 252 103 16 144 365 171 397 1.58e-19 93.6
MsG0180002483.01.T02 MTR_1g011610 77.778 81 18 0 1 81 1 81 7.15e-37 147
MsG0180002483.01.T02 MTR_1g011610 37.302 252 103 16 144 365 171 397 1.69e-19 93.6
MsG0180002483.01.T02 MTR_2g014020 49.600 125 58 2 483 603 197 320 1.37e-31 127
MsG0180002483.01.T02 MTR_2g014020 50.407 123 56 2 483 601 197 318 1.06e-30 127
MsG0180002483.01.T02 MTR_4g088670 45.652 92 43 2 518 602 11 102 5.87e-14 73.6
MsG0180002483.01.T02 MTR_4g088665 43.529 85 47 1 518 602 89 172 7.85e-13 70.9
MsG0180002483.01.T02 MTR_4g088620 46.970 66 35 0 537 602 36 101 9.70e-12 67.0
MsG0180002483.01.T02 MTR_4g088625 46.575 73 39 0 530 602 22 94 1.20e-11 66.6
MsG0180002483.01.T02 MTR_4g088640 44.186 86 47 1 517 602 94 178 3.51e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002483.01.T01 AT2G32700 71.359 618 142 11 1 612 1 589 0.0 789
MsG0180002483.01.T01 AT2G32700 71.129 620 142 12 1 612 1 591 0.0 784
MsG0180002483.01.T01 AT2G32700 71.129 620 142 12 1 612 1 591 0.0 784
MsG0180002483.01.T01 AT2G32700 71.129 620 142 12 1 612 1 591 0.0 784
MsG0180002483.01.T01 AT2G32700 71.129 620 142 12 1 612 1 591 0.0 784
MsG0180002483.01.T01 AT2G32700 71.129 620 142 12 1 612 1 591 0.0 784
MsG0180002483.01.T01 AT2G32700 69.014 639 142 13 1 612 1 610 0.0 773
MsG0180002483.01.T01 AT4G32551 52.941 238 100 5 394 628 521 749 2.03e-63 226
MsG0180002483.01.T01 AT4G32551 79.012 81 17 0 1 81 1 81 1.10e-37 150
MsG0180002483.01.T01 AT4G32551 35.096 208 98 10 132 316 186 379 4.13e-13 73.2
MsG0180002483.01.T01 AT4G32551 52.941 238 100 5 394 628 559 787 2.65e-63 226
MsG0180002483.01.T01 AT4G32551 79.012 81 17 0 1 81 1 81 1.26e-37 150
MsG0180002483.01.T01 AT4G32551 32.627 236 106 11 131 316 185 417 1.04e-11 68.9
MsG0180002483.01.T02 AT2G32700 71.359 618 142 11 1 612 1 589 0.0 789
MsG0180002483.01.T02 AT2G32700 71.129 620 142 12 1 612 1 591 0.0 784
MsG0180002483.01.T02 AT2G32700 71.129 620 142 12 1 612 1 591 0.0 784
MsG0180002483.01.T02 AT2G32700 71.129 620 142 12 1 612 1 591 0.0 784
MsG0180002483.01.T02 AT2G32700 71.129 620 142 12 1 612 1 591 0.0 784
MsG0180002483.01.T02 AT2G32700 71.129 620 142 12 1 612 1 591 0.0 784
MsG0180002483.01.T02 AT2G32700 69.014 639 142 13 1 612 1 610 0.0 773
MsG0180002483.01.T02 AT4G32551 52.941 238 100 5 394 628 521 749 2.03e-63 226
MsG0180002483.01.T02 AT4G32551 79.012 81 17 0 1 81 1 81 1.10e-37 150
MsG0180002483.01.T02 AT4G32551 35.096 208 98 10 132 316 186 379 4.13e-13 73.2
MsG0180002483.01.T02 AT4G32551 52.941 238 100 5 394 628 559 787 2.65e-63 226
MsG0180002483.01.T02 AT4G32551 79.012 81 17 0 1 81 1 81 1.26e-37 150
MsG0180002483.01.T02 AT4G32551 32.627 236 106 11 131 316 185 417 1.04e-11 68.9

Find 3 sgRNAs with CRISPR-Local

Find 738 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTATGGCGCAGAGTAAT+TGG 0.185140 1:-38974814 MsG0180002483.01.T02:exon
TTGAACTGAAAACGAAACTA+TGG 0.330004 1:-38974828 MsG0180002483.01.T02:exon
AACTATGGCGCAGAGTAATT+GGG 0.449762 1:-38974813 MsG0180002483.01.T02:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATAATAATAATAAAA+AGG + Chr1:38972161-38972180 None:intergenic 0.0%
!! AATATTATTGTATAACTAAA+CGG + Chr1:38965017-38965036 None:intergenic 10.0%
!! ATTAATCAATACAATAAATA+GGG - Chr1:38972022-38972041 MsG0180002483.01.T02:intron 10.0%
!! GTTTATTATATTATATTATG+TGG - Chr1:38971940-38971959 MsG0180002483.01.T02:intron 10.0%
!! TTATTATATTATATTATGTG+GGG - Chr1:38971942-38971961 MsG0180002483.01.T02:intron 10.0%
!!! AAAAAATGCATATTTTTTTA+TGG + Chr1:38972846-38972865 None:intergenic 10.0%
!!! AAATTTTTTCATGATTTAAA+TGG - Chr1:38966832-38966851 MsG0180002483.01.T02:intron 10.0%
!!! AATTTGTTAATTTGTTAATT+GGG - Chr1:38968238-38968257 MsG0180002483.01.T02:intron 10.0%
!!! TATTTTAGTATTTTTTTCAA+CGG - Chr1:38968443-38968462 MsG0180002483.01.T02:CDS 10.0%
!! AAAAATACGAATAAAATTCA+AGG + Chr1:38968337-38968356 None:intergenic 15.0%
!! ACATAAGAATAGTAATAATA+AGG + Chr1:38964981-38965000 None:intergenic 15.0%
!! ACTTTATATTTATGTAAAAC+AGG - Chr1:38966168-38966187 MsG0180002483.01.T02:intron 15.0%
!! ATAAGCTTATAAAAATGATA+TGG + Chr1:38969207-38969226 None:intergenic 15.0%
!! ATCTGTTTATAAGTTTAAAT+TGG + Chr1:38974814-38974833 None:intergenic 15.0%
!! ATTATTACTATTCTTATGTT+TGG - Chr1:38964982-38965001 MsG0180002483.01.T02:intron 15.0%
!! CATAAGAATAGTAATAATAA+GGG + Chr1:38964980-38964999 None:intergenic 15.0%
!! GATTAATCAATACAATAAAT+AGG - Chr1:38972021-38972040 MsG0180002483.01.T02:intron 15.0%
!! TAATATTGATACATTAAGTA+TGG - Chr1:38974061-38974080 MsG0180002483.01.T02:CDS 15.0%
!! TACATTTATTTATGTTACAA+AGG - Chr1:38974172-38974191 MsG0180002483.01.T02:CDS 15.0%
!! TAGAAAATGCAAAAATAAAA+AGG + Chr1:38971053-38971072 None:intergenic 15.0%
!! TGTTTACATATATGATTATT+TGG - Chr1:38965062-38965081 MsG0180002483.01.T02:intron 15.0%
!! TTCAAAGTACAAAAAATATT+GGG - Chr1:38969894-38969913 MsG0180002483.01.T02:intron 15.0%
!! TTTATAAGTTTAAATTGGTA+TGG + Chr1:38974809-38974828 None:intergenic 15.0%
!!! AGAATTGAATCAATTTTAAA+GGG - Chr1:38974025-38974044 MsG0180002483.01.T02:intron 15.0%
!!! CATTTGTTTTTAATATGATT+AGG - Chr1:38972976-38972995 MsG0180002483.01.T02:intron 15.0%
!!! GAATTTGTTAATTTGTTAAT+TGG - Chr1:38968237-38968256 MsG0180002483.01.T02:intron 15.0%
!!! GTTTTACATAAATATAAAGT+GGG + Chr1:38966168-38966187 None:intergenic 15.0%
!!! TAAAACTTTTAAAAGTAACA+TGG - Chr1:38974517-38974536 MsG0180002483.01.T02:intron 15.0%
!!! TAAAAGTTTTAACAAAACTA+GGG + Chr1:38974508-38974527 None:intergenic 15.0%
!!! TAGAATTGAATCAATTTTAA+AGG - Chr1:38974024-38974043 MsG0180002483.01.T02:intron 15.0%
!!! TATAATCTTTTACCATTTTT+CGG - Chr1:38965768-38965787 MsG0180002483.01.T02:intron 15.0%
!!! TATTTGAAGTTGAATATATT+TGG + Chr1:38965746-38965765 None:intergenic 15.0%
!!! TATTTTTCTTTTACTGTTTT+GGG - Chr1:38966212-38966231 MsG0180002483.01.T02:intron 15.0%
!!! TGTGACTTTTATTTTAAATT+AGG - Chr1:38968388-38968407 MsG0180002483.01.T02:CDS 15.0%
!!! TGTTTTACATAAATATAAAG+TGG + Chr1:38966169-38966188 None:intergenic 15.0%
!!! TTAAAAGTTTTAACAAAACT+AGG + Chr1:38974509-38974528 None:intergenic 15.0%
!!! TTATTTTTCTTTTACTGTTT+TGG - Chr1:38966211-38966230 MsG0180002483.01.T02:intron 15.0%
!!! TTTTACATAAATATAAAGTG+GGG + Chr1:38966167-38966186 None:intergenic 15.0%
!! AAATGAAAGTGACAAATTTA+CGG + Chr1:38974837-38974856 None:intergenic 20.0%
!! AAATTATAGGGTTTCTAATT+TGG + Chr1:38969468-38969487 None:intergenic 20.0%
!! AAGATTCAGCTAAAAATATA+GGG + Chr1:38971459-38971478 None:intergenic 20.0%
!! AATTATAGGGTTTCTAATTT+GGG + Chr1:38969467-38969486 None:intergenic 20.0%
!! ATGTAAAGTAGTAAGATATT+TGG - Chr1:38970219-38970238 MsG0180002483.01.T02:intron 20.0%
!! ATGTATATTTGAACATGATT+TGG - Chr1:38970768-38970787 MsG0180002483.01.T02:intron 20.0%
!! ATTCTATCAATCTAGTAAAA+AGG + Chr1:38973659-38973678 None:intergenic 20.0%
!! ATTGTTAGACAATAGAATAA+AGG + Chr1:38974198-38974217 None:intergenic 20.0%
!! CATGTTACATATTATTTCAA+TGG + Chr1:38972725-38972744 None:intergenic 20.0%
!! CGTAAATAACAAAAATCTAT+AGG + Chr1:38971705-38971724 None:intergenic 20.0%
!! GTAATATCAATTATCATATC+AGG + Chr1:38972521-38972540 None:intergenic 20.0%
!! GTTCAAAGTACAAAAAATAT+TGG - Chr1:38969893-38969912 MsG0180002483.01.T02:intron 20.0%
!! TAAGATTCAGCTAAAAATAT+AGG + Chr1:38971460-38971479 None:intergenic 20.0%
!! TAATTTACCACATATTTGAA+CGG - Chr1:38970939-38970958 MsG0180002483.01.T02:intron 20.0%
!! TAGTTAATCCTCAATTAATA+GGG - Chr1:38971996-38972015 MsG0180002483.01.T02:intron 20.0%
!! TATATTGTCTATATATGAGA+GGG - Chr1:38973863-38973882 MsG0180002483.01.T02:intron 20.0%
!! TATTAAATATATTAGTGCAG+TGG - Chr1:38968479-38968498 MsG0180002483.01.T02:CDS 20.0%
!! TATTATAGAATAACCGAAAA+AGG - Chr1:38971148-38971167 MsG0180002483.01.T02:intron 20.0%
!! TCAAAGTACAAAAAATATTG+GGG - Chr1:38969895-38969914 MsG0180002483.01.T02:intron 20.0%
!! TGTAAAGTAGTAAGATATTT+GGG - Chr1:38970220-38970239 MsG0180002483.01.T02:intron 20.0%
!! TTAACACCATCAAATAATAT+TGG - Chr1:38974472-38974491 MsG0180002483.01.T02:CDS 20.0%
!! TTGATTCTTAATATTAACAG+AGG + Chr1:38973238-38973257 None:intergenic 20.0%
!! TTTACATAAATATAAAGTGG+GGG + Chr1:38966166-38966185 None:intergenic 20.0%
!! TTTATGATTATATCTTCCAT+TGG + Chr1:38972650-38972669 None:intergenic 20.0%
!!! AGCTTTCTTTTATCATTTTT+AGG - Chr1:38970159-38970178 MsG0180002483.01.T02:intron 20.0%
!!! AGGTTTAATATTTTTTAGAC+AGG + Chr1:38974297-38974316 None:intergenic 20.0%
!!! AGTGTTTGTTATAAGTAAAA+TGG + Chr1:38970326-38970345 None:intergenic 20.0%
!!! ATAATGATGAAGATTTTGAA+GGG - Chr1:38973547-38973566 MsG0180002483.01.T02:intron 20.0%
!!! ATATTTTTAGCTGAATCTTA+TGG - Chr1:38971460-38971479 MsG0180002483.01.T02:intron 20.0%
!!! ATATTTTTTTTGTGAACTGA+AGG - Chr1:38965417-38965436 MsG0180002483.01.T02:intron 20.0%
!!! ATCTTTGATTTAGAATTCAT+TGG + Chr1:38972125-38972144 None:intergenic 20.0%
!!! ATGATTTGTTGATTTCAAAA+GGG + Chr1:38965698-38965717 None:intergenic 20.0%
!!! CAAATTCAATTTTTTTCCAA+TGG - Chr1:38972631-38972650 MsG0180002483.01.T02:intron 20.0%
!!! CTAAATCAAAGATCTAAAAT+TGG - Chr1:38972132-38972151 MsG0180002483.01.T02:intron 20.0%
!!! GAATTGAATCAATTTTAAAG+GGG - Chr1:38974026-38974045 MsG0180002483.01.T02:intron 20.0%
!!! GATTATTTGATGAAATTTTG+TGG + Chr1:38966314-38966333 None:intergenic 20.0%
!!! TCTTTAATTTACTGATTTAG+AGG - Chr1:38971874-38971893 MsG0180002483.01.T02:intron 20.0%
!!! TTGGGAATTTTGAAATTATA+GGG + Chr1:38969480-38969499 None:intergenic 20.0%
!!! TTTGGGAATTTTGAAATTAT+AGG + Chr1:38969481-38969500 None:intergenic 20.0%
! AAATCTAAATAGAACGTAGT+CGG + Chr1:38966970-38966989 None:intergenic 25.0%
! AAGTGATCTATCAAAAAAAC+TGG + Chr1:38968926-38968945 None:intergenic 25.0%
! AATAGGATAGGATTAGAAAT+AGG + Chr1:38972455-38972474 None:intergenic 25.0%
! AATAGTATAGTATATTACCC+AGG + Chr1:38965721-38965740 None:intergenic 25.0%
! ACTCATATAATCTTGAAACT+AGG - Chr1:38972564-38972583 MsG0180002483.01.T02:intron 25.0%
! AGAATGAAAAAAGAATGAGA+AGG - Chr1:38970186-38970205 MsG0180002483.01.T02:intron 25.0%
! AGTATATTATTCAGTGTACT+AGG - Chr1:38970272-38970291 MsG0180002483.01.T02:intron 25.0%
! AGTTGAAGAAAGGAAATTAT+AGG + Chr1:38973709-38973728 None:intergenic 25.0%
! ATATTTGGGTAAATTGTTCT+GGG - Chr1:38970234-38970253 MsG0180002483.01.T02:intron 25.0%
! ATCAATACAATAAATAGGGA+AGG - Chr1:38972026-38972045 MsG0180002483.01.T02:intron 25.0%
! ATCAATCTAGTAAAAAGGAA+AGG + Chr1:38973654-38973673 None:intergenic 25.0%
! ATTATAGGGTTTCTAATTTG+GGG + Chr1:38969466-38969485 None:intergenic 25.0%
! CAACTAACTAACTAACAAAA+GGG - Chr1:38967747-38967766 MsG0180002483.01.T02:intron 25.0%
! CATCAAATAATCATCTTTCT+AGG - Chr1:38966322-38966341 MsG0180002483.01.T02:intron 25.0%
! CGATTTAATTCTGTATTCAT+CGG - Chr1:38974668-38974687 MsG0180002483.01.T02:CDS 25.0%
! CTAGCTCAACTTTATAAAAT+CGG + Chr1:38967706-38967725 None:intergenic 25.0%
! CTAGTTAATCCTCAATTAAT+AGG - Chr1:38971995-38972014 MsG0180002483.01.T02:intron 25.0%
! CTATTAATTGAGGATTAACT+AGG + Chr1:38971997-38972016 None:intergenic 25.0%
! CTCATATATAGACAATATAC+CGG + Chr1:38973862-38973881 None:intergenic 25.0%
! CTGTCATAAATTAGTTAAGA+CGG - Chr1:38973078-38973097 MsG0180002483.01.T02:CDS 25.0%
! CTTCAAAATCTTCATCATTA+TGG + Chr1:38973548-38973567 None:intergenic 25.0%
! GATAACTTCATGTAATCAAT+TGG + Chr1:38973592-38973611 None:intergenic 25.0%
! GATGATTAACGAATATAACA+AGG - Chr1:38970633-38970652 MsG0180002483.01.T02:intron 25.0%
! GATTCAGAAATTTGTGATTT+GGG + Chr1:38969498-38969517 None:intergenic 25.0%
! GTATATTGTCTATATATGAG+AGG - Chr1:38973862-38973881 MsG0180002483.01.T02:intron 25.0%
! GTATATTTGAACAAAAGTAG+TGG - Chr1:38970708-38970727 MsG0180002483.01.T02:intron 25.0%
! GTGTAGTGTTTATATAACTT+GGG - Chr1:38967359-38967378 MsG0180002483.01.T02:intron 25.0%
! GTTAATGCAATTCAAATACA+TGG - Chr1:38970594-38970613 MsG0180002483.01.T02:intron 25.0%
! TAATAGATTGGATTTATCTG+AGG + Chr1:38974317-38974336 None:intergenic 25.0%
! TAATCAAGAATATATTCCAC+AGG - Chr1:38974583-38974602 MsG0180002483.01.T02:intron 25.0%
! TACATTAAGTATGGTAAAGA+AGG - Chr1:38974070-38974089 MsG0180002483.01.T02:CDS 25.0%
! TAGAAAAGCAAAAAGTGAAT+AGG + Chr1:38972472-38972491 None:intergenic 25.0%
! TCCACTTCAAAATAATAGAT+TGG + Chr1:38974329-38974348 None:intergenic 25.0%
! TCTGAAAGTTTGAATGAATT+TGG - Chr1:38966135-38966154 MsG0180002483.01.T02:intron 25.0%
! TGAACTTTGAGTAATGTTTA+AGG - Chr1:38968420-38968439 MsG0180002483.01.T02:CDS 25.0%
! TGAAGTTAATTGTGTTAAGT+GGG + Chr1:38970678-38970697 None:intergenic 25.0%
! TGATTCAGAAATTTGTGATT+TGG + Chr1:38969499-38969518 None:intergenic 25.0%
! TGGGTAATATACTATACTAT+TGG - Chr1:38965720-38965739 MsG0180002483.01.T02:intron 25.0%
! TGTGTAATGTTTATAAAGCT+TGG - Chr1:38967661-38967680 MsG0180002483.01.T02:intron 25.0%
! TGTGTAGTGTTTATATAACT+TGG - Chr1:38967358-38967377 MsG0180002483.01.T02:intron 25.0%
! TTAATCTTCCCTATTAATTG+AGG + Chr1:38972007-38972026 None:intergenic 25.0%
! TTCAGTCTTAGTATAACTAT+TGG + Chr1:38971915-38971934 None:intergenic 25.0%
! TTGAAGTTAATTGTGTTAAG+TGG + Chr1:38970679-38970698 None:intergenic 25.0%
!! AGCAGAATATAAGATCTTTT+AGG + Chr1:38974422-38974441 None:intergenic 25.0%
!! ATATTTGAACATGATTTGGA+TGG - Chr1:38970772-38970791 MsG0180002483.01.T02:intron 25.0%
!! ATTGATTCAATTCTATGACA+TGG + Chr1:38974019-38974038 None:intergenic 25.0%
!! CATAATGATGAAGATTTTGA+AGG - Chr1:38973546-38973565 MsG0180002483.01.T02:intron 25.0%
!! GATCTGGTTTAAATCAATTA+GGG - Chr1:38966476-38966495 MsG0180002483.01.T02:intron 25.0%
!! GCAGAATATAAGATCTTTTA+GGG + Chr1:38974421-38974440 None:intergenic 25.0%
!! GTGTAATTTTATTAAGTCCA+GGG - Chr1:38969923-38969942 MsG0180002483.01.T02:intron 25.0%
!! TCTCAGTACTCTATATTTTA+AGG - Chr1:38965935-38965954 MsG0180002483.01.T02:intron 25.0%
!! TGATCTGGTTTAAATCAATT+AGG - Chr1:38966475-38966494 MsG0180002483.01.T02:intron 25.0%
!! TGTAATTTTATTAAGTCCAG+GGG - Chr1:38969924-38969943 MsG0180002483.01.T02:intron 25.0%
!!! AAAATATAGAGTACTGAGAA+AGG + Chr1:38965934-38965953 None:intergenic 25.0%
!!! AACTTTTAAAAGTAACATGG+TGG - Chr1:38974520-38974539 MsG0180002483.01.T02:intron 25.0%
!!! AGGAAATCTTTTAGTTTATG+AGG - Chr1:38973895-38973914 MsG0180002483.01.T02:CDS 25.0%
!!! AGTTAGTTGGTCTTAAAATT+TGG + Chr1:38967736-38967755 None:intergenic 25.0%
!!! ATTGATTCTTGTTTTTTGCT+AGG - Chr1:38965034-38965053 MsG0180002483.01.T02:intron 25.0%
!!! ATTGTTGTTTTGAATGTTGT+AGG + Chr1:38969030-38969049 None:intergenic 25.0%
!!! CTTGATTATTTAAGAGCATT+AGG + Chr1:38974571-38974590 None:intergenic 25.0%
!!! CTTTGGTAATTTTTCTTTTG+TGG - Chr1:38970034-38970053 MsG0180002483.01.T02:intron 25.0%
!!! CTTTTCTAATCCTTAGTTTT+TGG - Chr1:38972484-38972503 MsG0180002483.01.T02:intron 25.0%
!!! GATGATTTGTTGATTTCAAA+AGG + Chr1:38965699-38965718 None:intergenic 25.0%
!!! GTTAGTTGGTCTTAAAATTT+GGG + Chr1:38967735-38967754 None:intergenic 25.0%
!!! TATAACAAACACTTTAGAGT+TGG - Chr1:38970333-38970352 MsG0180002483.01.T02:intron 25.0%
!!! TATGAAGTATTTTGACTACA+AGG + Chr1:38968632-38968651 None:intergenic 25.0%
!!! TCCAATCTATTATTTTGAAG+TGG - Chr1:38974325-38974344 MsG0180002483.01.T02:CDS 25.0%
!!! TTGTTAATTTGTTAATTGGG+AGG - Chr1:38968241-38968260 MsG0180002483.01.T02:intron 25.0%
!!! TTTGTTACTTTAAGCTTTAG+AGG - Chr1:38968295-38968314 MsG0180002483.01.T02:intron 25.0%
AAAAACCTTTACACTTTGCA+AGG + Chr1:38964704-38964723 None:intergenic 30.0%
AAAAACTGGTTGCAACTAAA+AGG + Chr1:38968912-38968931 None:intergenic 30.0%
AAAGAACAACCTAATGACAA+GGG + Chr1:38974917-38974936 None:intergenic 30.0%
AAAGTATGTTTCGACATTGT+AGG + Chr1:38970018-38970037 None:intergenic 30.0%
AAATTCGACTACAATTCAGA+TGG - Chr1:38970572-38970591 MsG0180002483.01.T02:intron 30.0%
AACCAGATCAGATATATTGA+TGG + Chr1:38966465-38966484 None:intergenic 30.0%
AACCATCAATATATCTGATC+TGG - Chr1:38966460-38966479 MsG0180002483.01.T02:intron 30.0%
AAGATGCTATATTGTCAAGA+AGG - Chr1:38973447-38973466 MsG0180002483.01.T02:intron 30.0%
AAGATGTAATACACACTCTA+GGG - Chr1:38967067-38967086 MsG0180002483.01.T02:intron 30.0%
AAGCAAAAAGTGAATAGGAT+AGG + Chr1:38972467-38972486 None:intergenic 30.0%
AAGCTACAAGAAAAATAGTG+CGG - Chr1:38969638-38969657 MsG0180002483.01.T02:intron 30.0%
AAGTATGTTTCGACATTGTA+GGG + Chr1:38970017-38970036 None:intergenic 30.0%
AATCTAAATAGAACGTAGTC+GGG + Chr1:38966969-38966988 None:intergenic 30.0%
AATGCAATCTACTTCATCTA+AGG - Chr1:38966748-38966767 MsG0180002483.01.T02:intron 30.0%
ACCTATGTTTGTTCAATCAA+TGG - Chr1:38972604-38972623 MsG0180002483.01.T02:intron 30.0%
AGAACAAAACTCACAGTTAA+AGG + Chr1:38966417-38966436 None:intergenic 30.0%
AGAATAACCGAAAAAGGAAA+GGG - Chr1:38971154-38971173 MsG0180002483.01.T02:intron 30.0%
AGACAATGATAAGACTGATA+TGG + Chr1:38972320-38972339 None:intergenic 30.0%
AGGATAGCCATCTTATAATT+TGG + Chr1:38967433-38967452 None:intergenic 30.0%
AGGTGCAAAAAATAAATTCC+AGG - Chr1:38969868-38969887 MsG0180002483.01.T02:intron 30.0%
AGTGTTAGAAAGATTGTCTT+GGG - Chr1:38969842-38969861 MsG0180002483.01.T02:intron 30.0%
ATGTATTGTGTGACAGTATA+TGG + Chr1:38973177-38973196 None:intergenic 30.0%
ATGTGGTAAATTACGTTTAG+TGG + Chr1:38970932-38970951 None:intergenic 30.0%
CACAATTAACTTCAATTCTC+AGG - Chr1:38970684-38970703 MsG0180002483.01.T02:intron 30.0%
CCAACTAACTAACTAACAAA+AGG - Chr1:38967746-38967765 MsG0180002483.01.T02:intron 30.0%
CCTATATCAGGATTAAATCA+GGG - Chr1:38966363-38966382 MsG0180002483.01.T02:intron 30.0%
CTAAGTCATTTATGACAGAA+GGG - Chr1:38965109-38965128 MsG0180002483.01.T02:intron 30.0%
CTTTGAATCTACTTTGGTAA+GGG + Chr1:38974388-38974407 None:intergenic 30.0%
GAAATAACTGCCATGTAAAT+GGG - Chr1:38973745-38973764 MsG0180002483.01.T02:CDS 30.0%
GAATGTACGTTTATATAAGC+AGG - Chr1:38971966-38971985 MsG0180002483.01.T02:intron 30.0%
GATATTGCTATACTGACATA+CGG + Chr1:38969173-38969192 None:intergenic 30.0%
GATATTTGGGTAAATTGTTC+TGG - Chr1:38970233-38970252 MsG0180002483.01.T02:intron 30.0%
GATGGTTAACGAATATAACA+AGG + Chr1:38970902-38970921 None:intergenic 30.0%
GGATAGCCATCTTATAATTT+GGG + Chr1:38967432-38967451 None:intergenic 30.0%
GGTGCAAAAAATAAATTCCA+GGG - Chr1:38969869-38969888 MsG0180002483.01.T02:intron 30.0%
GTAGAATTTGCATCTTTGAA+AGG + Chr1:38968952-38968971 None:intergenic 30.0%
GTATATGATTCCATCTTAAC+AGG - Chr1:38973011-38973030 MsG0180002483.01.T02:CDS 30.0%
GTGCAAAAAATAAATTCCAG+GGG - Chr1:38969870-38969889 MsG0180002483.01.T02:intron 30.0%
GTGTTCAAAAACTATTCAGT+AGG + Chr1:38972543-38972562 None:intergenic 30.0%
TAAACTGACAACAATTTGGA+TGG + Chr1:38970971-38970990 None:intergenic 30.0%
TAATTCCTTGCAAAGTGTAA+AGG - Chr1:38964696-38964715 MsG0180002483.01.T02:CDS 30.0%
TAATTCTCTTCTCCTATATC+AGG - Chr1:38966351-38966370 MsG0180002483.01.T02:intron 30.0%
TACAAAAAATATTGGGGTAC+TGG - Chr1:38969901-38969920 MsG0180002483.01.T02:intron 30.0%
TACAAAAATGACCCTTCAAA+CGG + Chr1:38968051-38968070 None:intergenic 30.0%
TACAATGTCGAAACATACTT+TGG - Chr1:38970017-38970036 MsG0180002483.01.T02:intron 30.0%
TAGAATAACCGAAAAAGGAA+AGG - Chr1:38971153-38971172 MsG0180002483.01.T02:intron 30.0%
TATAGAACTAACTTCACTGA+AGG + Chr1:38971757-38971776 None:intergenic 30.0%
TCCTATATCAGGATTAAATC+AGG - Chr1:38966362-38966381 MsG0180002483.01.T02:intron 30.0%
TGAAATAACTGCCATGTAAA+TGG - Chr1:38973744-38973763 MsG0180002483.01.T02:CDS 30.0%
TGAAATCAACAAATCATCCT+GGG - Chr1:38965701-38965720 MsG0180002483.01.T02:intron 30.0%
TGAGCTCAATTGAATTGAAT+TGG + Chr1:38964845-38964864 None:intergenic 30.0%
TGATTGCTAACTTCAAAAGT+CGG - Chr1:38968863-38968882 MsG0180002483.01.T02:intron 30.0%
TGCAAAAAATAAATTCCAGG+GGG - Chr1:38969871-38969890 MsG0180002483.01.T02:intron 30.0%
TTAATTGAGGATTAACTAGG+AGG + Chr1:38971994-38972013 None:intergenic 30.0%
TTACACTTTGCAAGGAATTA+GGG + Chr1:38964696-38964715 None:intergenic 30.0%
TTACTCCCATGTGTAAAATA+CGG - Chr1:38968006-38968025 MsG0180002483.01.T02:intron 30.0%
TTAGATGAAGTAGATTGCAT+TGG + Chr1:38966749-38966768 None:intergenic 30.0%
TTATAGGGTTTCTAATTTGG+GGG + Chr1:38969465-38969484 None:intergenic 30.0%
TTCAAATATACATGATGCTG+AGG + Chr1:38970761-38970780 None:intergenic 30.0%
TTCACTTAAAACCGTTTGAA+GGG - Chr1:38968037-38968056 MsG0180002483.01.T02:intron 30.0%
TTCTATGACATGGCAAAATA+AGG + Chr1:38974009-38974028 None:intergenic 30.0%
TTCTGTGAAAATATAACCCA+TGG + Chr1:38966913-38966932 None:intergenic 30.0%
TTGAAATCAACAAATCATCC+TGG - Chr1:38965700-38965719 MsG0180002483.01.T02:intron 30.0%
TTGAACTGAAAACGAAACTA+TGG - Chr1:38964909-38964928 MsG0180002483.01.T02:intron 30.0%
TTGAATGTTGTAGGAGTTTA+TGG + Chr1:38969021-38969040 None:intergenic 30.0%
TTGACCAACTTATTATCTGA+AGG + Chr1:38967025-38967044 None:intergenic 30.0%
TTTACACTTTGCAAGGAATT+AGG + Chr1:38964697-38964716 None:intergenic 30.0%
! ATCTTTTTGCAAGCATTTTG+TGG - Chr1:38973481-38973500 MsG0180002483.01.T02:intron 30.0%
! CCTTTTGTTAGTTAGTTAGT+TGG + Chr1:38967749-38967768 None:intergenic 30.0%
! CGATTTTATAAAGTTGAGCT+AGG - Chr1:38967704-38967723 MsG0180002483.01.T02:intron 30.0%
! CTGTTCTGAATCACAAATTT+CGG - Chr1:38969523-38969542 MsG0180002483.01.T02:intron 30.0%
! GAGTTTTTAACGCATAGAAA+AGG - Chr1:38973053-38973072 MsG0180002483.01.T02:CDS 30.0%
! GGTGTAATTTTATTAAGTCC+AGG - Chr1:38969922-38969941 MsG0180002483.01.T02:intron 30.0%
! GTAATTTTATTAAGTCCAGG+GGG - Chr1:38969925-38969944 MsG0180002483.01.T02:intron 30.0%
! GTGGAACTTTTATAAAACAG+AGG - Chr1:38974539-38974558 MsG0180002483.01.T02:intron 30.0%
! GTTATTTACGTTGACTGTAT+AGG - Chr1:38971715-38971734 MsG0180002483.01.T02:intron 30.0%
! TAAAGGTTTTTCTTCCTGAT+CGG - Chr1:38964713-38964732 MsG0180002483.01.T02:CDS 30.0%
! TCCATTGATTGAACAAACAT+AGG + Chr1:38972608-38972627 None:intergenic 30.0%
! TGAACTTGATAATACTCTGA+TGG - Chr1:38966809-38966828 MsG0180002483.01.T02:intron 30.0%
! TTGATGATTTATGGTACTGA+AGG - Chr1:38971327-38971346 MsG0180002483.01.T02:intron 30.0%
!! AAGATTTTGAAGGGAAAAAG+AGG - Chr1:38973556-38973575 MsG0180002483.01.T02:intron 30.0%
!! ATTTTGTAACTTGCATTACC+CGG - Chr1:38971400-38971419 MsG0180002483.01.T02:intron 30.0%
!! CTGCATGTTCATTTTTCATA+AGG - Chr1:38966238-38966257 MsG0180002483.01.T02:intron 30.0%
!! GTCAACATCTGTTTACTTTT+TGG + Chr1:38967829-38967848 None:intergenic 30.0%
!! TAGACAGGATTCTTTTGATT+TGG + Chr1:38974282-38974301 None:intergenic 30.0%
!! TCTCTTTTAACTGTTAGTGT+TGG - Chr1:38975095-38975114 MsG0180002483.01.T02:five_prime_UTR 30.0%
!! TGTGTTCAAAAAGGTTGATA+AGG + Chr1:38968716-38968735 None:intergenic 30.0%
!! TTCTAATCCTTAGTTTTTGG+TGG - Chr1:38972487-38972506 MsG0180002483.01.T02:intron 30.0%
!! TTTCGTTTTTACCTTGGATT+TGG + Chr1:38974365-38974384 None:intergenic 30.0%
!!! ATTTTGTTTTAGTTGCAGGA+TGG - Chr1:38971521-38971540 MsG0180002483.01.T02:intron 30.0%
!!! GTTCATTTTGTTTTAGTTGC+AGG - Chr1:38971517-38971536 MsG0180002483.01.T02:intron 30.0%
!!! TTCAAACGGTTTTAAGTGAA+GGG + Chr1:38968037-38968056 None:intergenic 30.0%
AAACTGGAGTGAATGATTCA+TGG - Chr1:38974774-38974793 MsG0180002483.01.T02:intron 35.0%
AAATGCAGGTTAGAACTACT+GGG - Chr1:38966093-38966112 MsG0180002483.01.T02:intron 35.0%
AACCAACAGAAACACATACA+GGG + Chr1:38965882-38965901 None:intergenic 35.0%
AACTGGAGTGAATGATTCAT+GGG - Chr1:38974775-38974794 MsG0180002483.01.T02:intron 35.0%
AAGTACCTCTAAATATGCTG+CGG + Chr1:38965350-38965369 None:intergenic 35.0%
ACAAAATACAATTCCCGATC+AGG + Chr1:38964730-38964749 None:intergenic 35.0%
ACAACTAACCTCAAAACAGA+TGG + Chr1:38964809-38964828 None:intergenic 35.0%
ACACCAGATTGAATAAGGAT+AGG + Chr1:38972401-38972420 None:intergenic 35.0%
ACAGTATATGGTACCAAAGA+AGG + Chr1:38973165-38973184 None:intergenic 35.0%
ACATGAAGTTATCGTACTGT+GGG - Chr1:38973599-38973618 MsG0180002483.01.T02:intron 35.0%
ACCAAACACCAGATTGAATA+AGG + Chr1:38972406-38972425 None:intergenic 35.0%
ACCAAAGTAGATTCAAAGGA+AGG - Chr1:38974390-38974409 MsG0180002483.01.T02:CDS 35.0%
ACCATAAATCATCAAACCCT+TGG + Chr1:38971322-38971341 None:intergenic 35.0%
AGCAAGGAGGAATAAATAGA+AGG + Chr1:38967139-38967158 None:intergenic 35.0%
AGCTACAAGAAAAATAGTGC+GGG - Chr1:38969639-38969658 MsG0180002483.01.T02:intron 35.0%
AGGATTGAATTTCCAACAGT+TGG + Chr1:38967213-38967232 None:intergenic 35.0%
AGTTAATTGTGTTAAGTGGG+CGG + Chr1:38970675-38970694 None:intergenic 35.0%
AGTTCTATACGCAAAAGCAA+TGG - Chr1:38971768-38971787 MsG0180002483.01.T02:intron 35.0%
ATAATAACAGTGTGTTCCTC+TGG + Chr1:38974972-38974991 None:intergenic 35.0%
ATAGACAATATACCGGATAC+CGG + Chr1:38973855-38973874 None:intergenic 35.0%
ATCAAAAGCGAAGTCAACAT+GGG - Chr1:38965995-38966014 MsG0180002483.01.T02:intron 35.0%
ATCATTGTCTGCTCCTATTA+CGG - Chr1:38972330-38972349 MsG0180002483.01.T02:intron 35.0%
ATGATGTCTCTGTATCCATA+GGG + Chr1:38965648-38965667 None:intergenic 35.0%
ATGCCTTTACAGGTAAAAAC+CGG - Chr1:38973833-38973852 MsG0180002483.01.T02:intron 35.0%
ATGGATCAAAACACTGCATT+GGG + Chr1:38964790-38964809 None:intergenic 35.0%
ATTAAAGCGAAACGAAGAGT+AGG + Chr1:38965374-38965393 None:intergenic 35.0%
ATTAACTCTCTCCATATCAC+AGG + Chr1:38967792-38967811 None:intergenic 35.0%
ATTACACAGACCATATCTCT+AGG + Chr1:38967649-38967668 None:intergenic 35.0%
ATTATCAAGTTCATGCACCA+TGG + Chr1:38966802-38966821 None:intergenic 35.0%
ATTCTGTATTCATCGGATGT+TGG - Chr1:38974675-38974694 MsG0180002483.01.T02:CDS 35.0%
ATTGGCAATTCACAAGTGTA+TGG - Chr1:38966629-38966648 MsG0180002483.01.T02:intron 35.0%
ATTTCCTGTACCAGTACTAT+TGG + Chr1:38971199-38971218 None:intergenic 35.0%
CAAAGAACAACCTAATGACA+AGG + Chr1:38974918-38974937 None:intergenic 35.0%
CAAGGAGGAATAAATAGAAG+GGG + Chr1:38967137-38967156 None:intergenic 35.0%
CACAAAATCATTCAATGCTC+AGG + Chr1:38966884-38966903 None:intergenic 35.0%
CACAATCTTCATAGCAGAAA+AGG - Chr1:38968807-38968826 MsG0180002483.01.T02:intron 35.0%
CAGATTGAATAAGGATAGGA+TGG + Chr1:38972397-38972416 None:intergenic 35.0%
CAGCTAAACTGACAACAATT+TGG + Chr1:38970975-38970994 None:intergenic 35.0%
CATCATTATGGATTTAGCCT+AGG + Chr1:38973536-38973555 None:intergenic 35.0%
CATCCTATCCTTATTCAATC+TGG - Chr1:38972395-38972414 MsG0180002483.01.T02:intron 35.0%
CATGCCTTCAGATAATAAGT+TGG - Chr1:38967018-38967037 MsG0180002483.01.T02:intron 35.0%
CATGCTACAGATTCTTCAAA+AGG - Chr1:38971659-38971678 MsG0180002483.01.T02:intron 35.0%
CATGTTCTGCTATCATCATT+TGG - Chr1:38972741-38972760 MsG0180002483.01.T02:intron 35.0%
CCAAAGTAGATTCAAAGGAA+GGG - Chr1:38974391-38974410 MsG0180002483.01.T02:CDS 35.0%
CCCTGATTTAATCCTGATAT+AGG + Chr1:38966366-38966385 None:intergenic 35.0%
CCTTACCAAAGTAGATTCAA+AGG - Chr1:38974386-38974405 MsG0180002483.01.T02:CDS 35.0%
CCTTTGAATCTACTTTGGTA+AGG + Chr1:38974389-38974408 None:intergenic 35.0%
CGAAATTTGTGATTCAGAAC+AGG + Chr1:38969525-38969544 None:intergenic 35.0%
CGTGGTTAATTATGTTCAGT+GGG - Chr1:38970855-38970874 MsG0180002483.01.T02:intron 35.0%
CTAAATGCTATCACTACAGA+AGG - Chr1:38965553-38965572 MsG0180002483.01.T02:intron 35.0%
CTAACTAACTAACCAACTGT+TGG - Chr1:38967198-38967217 MsG0180002483.01.T02:intron 35.0%
CTAAGTCAACCTTACAAAAC+CGG + Chr1:38967403-38967422 None:intergenic 35.0%
CTGCAAAAATGTATGAGGAT+CGG - Chr1:38965608-38965627 MsG0180002483.01.T02:intron 35.0%
CTGTATCCATGCTTCAAAAA+TGG + Chr1:38973954-38973973 None:intergenic 35.0%
CTGTGGATCCTTCAATTTAT+GGG - Chr1:38966038-38966057 MsG0180002483.01.T02:intron 35.0%
CTTCACTTAAAACCGTTTGA+AGG - Chr1:38968036-38968055 MsG0180002483.01.T02:intron 35.0%
CTTTACCAACTTCGATTACT+TGG - Chr1:38973768-38973787 MsG0180002483.01.T02:intron 35.0%
GAACAGATTGCGTAATCAAA+TGG + Chr1:38968785-38968804 None:intergenic 35.0%
GAAGATGTAATACACACTCT+AGG - Chr1:38967066-38967085 MsG0180002483.01.T02:intron 35.0%
GAGTGACTTTAGTTGAAGAA+AGG + Chr1:38973719-38973738 None:intergenic 35.0%
GAGTGTTAGAAAGATTGTCT+TGG - Chr1:38969841-38969860 MsG0180002483.01.T02:intron 35.0%
GATGAAAAACTCTAACCCTA+TGG - Chr1:38965630-38965649 MsG0180002483.01.T02:intron 35.0%
GCAAGGAGGAATAAATAGAA+GGG + Chr1:38967138-38967157 None:intergenic 35.0%
GCTAAGTCATTTATGACAGA+AGG - Chr1:38965108-38965127 MsG0180002483.01.T02:intron 35.0%
GGATACTAGAAGTAAACTTC+TGG + Chr1:38974737-38974756 None:intergenic 35.0%
GGGTAGAAGTTAAGATTAGT+GGG + Chr1:38967117-38967136 None:intergenic 35.0%
GGTGAAAGAATAGTCAAGTA+GGG + Chr1:38966948-38966967 None:intergenic 35.0%
GTACATGCACAAGGAAATAT+TGG - Chr1:38966611-38966630 MsG0180002483.01.T02:intron 35.0%
GTATGAATAGATGGAGTTGA+CGG + Chr1:38971246-38971265 None:intergenic 35.0%
GTCGAACCCAAATTATAAGA+TGG - Chr1:38967423-38967442 MsG0180002483.01.T02:intron 35.0%
GTGAAAGAATAGTCAAGTAG+GGG + Chr1:38966947-38966966 None:intergenic 35.0%
GTGAGGCCAATATTATTTGA+TGG + Chr1:38974481-38974500 None:intergenic 35.0%
GTGGTTAATTATGTTCAGTG+GGG - Chr1:38970856-38970875 MsG0180002483.01.T02:intron 35.0%
GTGTAAGAAAATCACGCAAA+TGG + Chr1:38971104-38971123 None:intergenic 35.0%
GTTAGGAGTCAAGAATGTTA+GGG + Chr1:38967175-38967194 None:intergenic 35.0%
GTTCAGAAAAACACTTGACT+TGG + Chr1:38973384-38973403 None:intergenic 35.0%
GTTTACTTCTAGTATCCGTA+TGG - Chr1:38974740-38974759 MsG0180002483.01.T02:intron 35.0%
TAAGATTAGTGGGAGAGATT+GGG + Chr1:38967107-38967126 None:intergenic 35.0%
TACATGAAGTTATCGTACTG+TGG - Chr1:38973598-38973617 MsG0180002483.01.T02:intron 35.0%
TACTCCCATGTGTAAAATAC+GGG - Chr1:38968007-38968026 MsG0180002483.01.T02:intron 35.0%
TATCAAAAGCGAAGTCAACA+TGG - Chr1:38965994-38966013 MsG0180002483.01.T02:intron 35.0%
TATGAGGATTGTGCAGAAAT+AGG - Chr1:38973911-38973930 MsG0180002483.01.T02:CDS 35.0%
TCAATCCAAGTAATCGAAGT+TGG + Chr1:38973776-38973795 None:intergenic 35.0%
TCATTTCTCTCACAAGATGA+TGG - Chr1:38971590-38971609 MsG0180002483.01.T02:intron 35.0%
TCCTTATTCAATCTGGTGTT+TGG - Chr1:38972402-38972421 MsG0180002483.01.T02:intron 35.0%
TCGTGGTTAATTATGTTCAG+TGG - Chr1:38970854-38970873 MsG0180002483.01.T02:intron 35.0%
TCTAGCATCTAAAAGTGGTT+GGG + Chr1:38965671-38965690 None:intergenic 35.0%
TCTGTAGTGATAGCATTTAG+AGG + Chr1:38965553-38965572 None:intergenic 35.0%
TGAGAGAGATGTGTTCAAAA+AGG + Chr1:38968725-38968744 None:intergenic 35.0%
TGCTAAACCACCAAAAACTA+AGG + Chr1:38972497-38972516 None:intergenic 35.0%
TGGAAATTCAATCCTCATTG+CGG - Chr1:38967218-38967237 MsG0180002483.01.T02:intron 35.0%
TGTTATAATCCCGTATACAC+AGG + Chr1:38975136-38975155 None:intergenic 35.0%
TTAAAGCGAAACGAAGAGTA+GGG + Chr1:38965373-38965392 None:intergenic 35.0%
TTAAGATTAGTGGGAGAGAT+TGG + Chr1:38967108-38967127 None:intergenic 35.0%
TTAATTATGTTCAGTGGGGA+TGG - Chr1:38970860-38970879 MsG0180002483.01.T02:intron 35.0%
TTAGTTAAGACGGTAGAACA+CGG - Chr1:38973088-38973107 MsG0180002483.01.T02:CDS 35.0%
TTATCCTATCCCTTGTCATT+AGG - Chr1:38974905-38974924 MsG0180002483.01.T02:intron 35.0%
TTCACAAGTGTATGGAGATA+TGG - Chr1:38966637-38966656 MsG0180002483.01.T02:intron 35.0%
TTCATTGTGTTAGGTGTGAA+GGG - Chr1:38967604-38967623 MsG0180002483.01.T02:intron 35.0%
TTCTAGCATCTAAAAGTGGT+TGG + Chr1:38965672-38965691 None:intergenic 35.0%
TTCTAGTATCCGTATGGTAT+GGG - Chr1:38974746-38974765 MsG0180002483.01.T02:intron 35.0%
TTGACGGTTGAGAATTAGAA+GGG + Chr1:38971230-38971249 None:intergenic 35.0%
TTTGCAATACATGCCTTTAC+AGG - Chr1:38973823-38973842 MsG0180002483.01.T02:intron 35.0%
TTTGGCTGCAAAAATGTATG+AGG - Chr1:38965603-38965622 MsG0180002483.01.T02:intron 35.0%
! AAAGGTTTTTCTTCCTGATC+GGG - Chr1:38964714-38964733 MsG0180002483.01.T02:CDS 35.0%
! AATTACGTTTAGTGGATGAC+TGG + Chr1:38970924-38970943 None:intergenic 35.0%
! ACTTATTTGGGACGTTGAAA+CGG - Chr1:38971624-38971643 MsG0180002483.01.T02:intron 35.0%
! ATATGAGAGGGATGTTTTCT+AGG - Chr1:38973875-38973894 MsG0180002483.01.T02:intron 35.0%
! ATGATTTTGTGGATGATCCA+TGG - Chr1:38966893-38966912 MsG0180002483.01.T02:intron 35.0%
! CAATCCCGTATTTTACACAT+GGG + Chr1:38968014-38968033 None:intergenic 35.0%
! CAGTTGGTTAGTTAGTTAGA+TGG + Chr1:38967197-38967216 None:intergenic 35.0%
! CATCTCTAAATTTTCCTCCT+CGG - Chr1:38965966-38965985 MsG0180002483.01.T02:intron 35.0%
! CTTGTCATTAGGTTGTTCTT+TGG - Chr1:38974916-38974935 MsG0180002483.01.T02:intron 35.0%
! GGTTAGTTAGTTAGATGGTT+AGG + Chr1:38967192-38967211 None:intergenic 35.0%
! GTGATGGAAAGGACTTATTT+GGG - Chr1:38971612-38971631 MsG0180002483.01.T02:intron 35.0%
! TATGATTAGGTTGTACTGCT+TGG - Chr1:38972989-38973008 MsG0180002483.01.T02:intron 35.0%
! TCCAAGGGTTTGATGATTTA+TGG - Chr1:38971318-38971337 MsG0180002483.01.T02:intron 35.0%
! TGATTTTGTGGATGATCCAT+GGG - Chr1:38966894-38966913 MsG0180002483.01.T02:intron 35.0%
! TGTTAACTGAGAGTACGAAT+CGG - Chr1:38964597-38964616 MsG0180002483.01.T02:CDS 35.0%
!! AAAATCGGCTTGTAAAGTGA+AGG + Chr1:38967691-38967710 None:intergenic 35.0%
!! ACCACTTTTAGATGCTAGAA+TGG - Chr1:38965672-38965691 MsG0180002483.01.T02:intron 35.0%
!! ATACAAGTTGATTTACCAGC+TGG + Chr1:38971380-38971399 None:intergenic 35.0%
!! GAAACTGATTTGCACTTTGA+AGG + Chr1:38966550-38966569 None:intergenic 35.0%
!! GTTGATTCTTTTGTTCTCCT+AGG - Chr1:38973516-38973535 MsG0180002483.01.T02:intron 35.0%
!! GTTGGTCTTAAAATTTGGGT+TGG + Chr1:38967731-38967750 None:intergenic 35.0%
!! GTTTTGATCCATCTGTTTTG+AGG - Chr1:38964798-38964817 MsG0180002483.01.T02:CDS 35.0%
!! TAAGGGTTTCGTTTTTACCT+TGG + Chr1:38974371-38974390 None:intergenic 35.0%
!! TATAGAGTACTGAGAAAGGA+AGG + Chr1:38965930-38965949 None:intergenic 35.0%
!! TATTCACCGATTTCAGAAGA+TGG + Chr1:38968686-38968705 None:intergenic 35.0%
!! TTAGGTTGTTCTTTGGAACA+TGG - Chr1:38974923-38974942 MsG0180002483.01.T02:intron 35.0%
!! TTGGAACATTTTGGAGATGT+TGG - Chr1:38971545-38971564 MsG0180002483.01.T02:intron 35.0%
!! TTTTGTAACTTGCATTACCC+GGG - Chr1:38971401-38971420 MsG0180002483.01.T02:intron 35.0%
!!! ACATGACCATTTTTGAAGCA+TGG - Chr1:38973945-38973964 MsG0180002483.01.T02:intron 35.0%
!!! ATACCGGTTTTTACCTGTAA+AGG + Chr1:38973839-38973858 None:intergenic 35.0%
!!! ATCTGTTTTGAGGTTAGTTG+TGG - Chr1:38964808-38964827 MsG0180002483.01.T02:CDS 35.0%
!!! CTGAGCATTGAATGATTTTG+TGG - Chr1:38966882-38966901 MsG0180002483.01.T02:intron 35.0%
!!! CTTCAAACGGTTTTAAGTGA+AGG + Chr1:38968038-38968057 None:intergenic 35.0%
!!! TGTGTCGTTTTGACACAAAA+TGG - Chr1:38970542-38970561 MsG0180002483.01.T02:intron 35.0%
AAACTATGGCGCAGAGTAAT+TGG - Chr1:38964923-38964942 MsG0180002483.01.T02:intron 40.0%
AACAAAACTAGGGAGTAGTG+AGG + Chr1:38974498-38974517 None:intergenic 40.0%
AACTATGGCGCAGAGTAATT+GGG - Chr1:38964924-38964943 MsG0180002483.01.T02:intron 40.0%
AATGTTGCTGGTGTATCCAA+GGG - Chr1:38971303-38971322 MsG0180002483.01.T02:intron 40.0%
AATTGAAGGATCCACAGGTA+AGG + Chr1:38966035-38966054 None:intergenic 40.0%
AATTTCGGAGAAAGCCAGAA+AGG - Chr1:38969538-38969557 MsG0180002483.01.T02:intron 40.0%
ACAACCTAATGACAAGGGAT+AGG + Chr1:38974912-38974931 None:intergenic 40.0%
ACAGAGGCTATATGACTATG+TGG + Chr1:38973222-38973241 None:intergenic 40.0%
ACCAACAGAAACACATACAG+GGG + Chr1:38965881-38965900 None:intergenic 40.0%
ACCATATCTCTAGGCAATGT+GGG + Chr1:38967640-38967659 None:intergenic 40.0%
ACTCCATCTATTCATACTCC+TGG - Chr1:38971249-38971268 MsG0180002483.01.T02:intron 40.0%
ACTCTTACGCATATCAGAGA+TGG - Chr1:38968972-38968991 MsG0180002483.01.T02:intron 40.0%
ACTGAAGGAAAAGCCTGAAA+TGG + Chr1:38971742-38971761 None:intergenic 40.0%
ACTGGTACAGGAAATACACT+TGG - Chr1:38971204-38971223 MsG0180002483.01.T02:intron 40.0%
AGAAAGATTGTCTTGGGTCA+AGG - Chr1:38969848-38969867 MsG0180002483.01.T02:intron 40.0%
AGATCTCAGGGAATGAAGAA+AGG - Chr1:38969748-38969767 MsG0180002483.01.T02:intron 40.0%
AGGTTAGAACTACTGGGAAA+AGG - Chr1:38966099-38966118 MsG0180002483.01.T02:intron 40.0%
AGTCAACCAATTGCAAACGA+TGG - Chr1:38966710-38966729 MsG0180002483.01.T02:intron 40.0%
ATCAAAACACTGCATTGGGA+TGG + Chr1:38964786-38964805 None:intergenic 40.0%
ATCACTACAGAAGGAATGCT+AGG - Chr1:38965562-38965581 MsG0180002483.01.T02:intron 40.0%
ATCTCGTGTCTATCCTTCTT+TGG - Chr1:38973149-38973168 MsG0180002483.01.T02:CDS 40.0%
ATGGATCCTCAACGATTAAG+AGG - Chr1:38966656-38966675 MsG0180002483.01.T02:intron 40.0%
ATGTGATGCAATAAGCAAGG+AGG + Chr1:38967152-38967171 None:intergenic 40.0%
ATTGACCCATCGTTTGCAAT+TGG + Chr1:38966719-38966738 None:intergenic 40.0%
ATTGCAAACGATGGGTCAAT+AGG - Chr1:38966719-38966738 MsG0180002483.01.T02:intron 40.0%
ATTTAGAGGAGGAGTTCCAA+TGG + Chr1:38965539-38965558 None:intergenic 40.0%
CAAAGGATCATGTTGTTGCT+GGG + Chr1:38970473-38970492 None:intergenic 40.0%
CAAATGCAGGTTAGAACTAC+TGG - Chr1:38966092-38966111 MsG0180002483.01.T02:intron 40.0%
CAAATGCCTTCTATAGTGAC+AGG + Chr1:38972962-38972981 None:intergenic 40.0%
CAACCAACAGAAACACATAC+AGG + Chr1:38965883-38965902 None:intergenic 40.0%
CACTTATTCTGTCATGCGTT+TGG + Chr1:38972934-38972953 None:intergenic 40.0%
CAGATTGCGTAATCAAATGG+CGG + Chr1:38968782-38968801 None:intergenic 40.0%
CATCTGACTGTTTAGGCAAA+AGG + Chr1:38965794-38965813 None:intergenic 40.0%
CCATAAATTGAAGGATCCAC+AGG + Chr1:38966040-38966059 None:intergenic 40.0%
CCCTTCCTTTGAATCTACTT+TGG + Chr1:38974394-38974413 None:intergenic 40.0%
CCTGTGGATCCTTCAATTTA+TGG - Chr1:38966037-38966056 MsG0180002483.01.T02:intron 40.0%
CCTTGTCTTTCCTGTGTATA+CGG - Chr1:38975123-38975142 MsG0180002483.01.T02:five_prime_UTR 40.0%
CGATGAAGAAGTTGTGTTTG+CGG + Chr1:38968124-38968143 None:intergenic 40.0%
CTAAACAGTCAGATGGTTCA+AGG - Chr1:38965799-38965818 MsG0180002483.01.T02:intron 40.0%
CTTCACACCTAACACAATGA+AGG + Chr1:38967605-38967624 None:intergenic 40.0%
CTTCATTGTGTTAGGTGTGA+AGG - Chr1:38967603-38967622 MsG0180002483.01.T02:intron 40.0%
CTTCGTTTGATACAACTGTG+CGG - Chr1:38975036-38975055 MsG0180002483.01.T02:five_prime_UTR 40.0%
CTTCTAGTATCCGTATGGTA+TGG - Chr1:38974745-38974764 MsG0180002483.01.T02:intron 40.0%
CTTGAACCATCTGACTGTTT+AGG + Chr1:38965801-38965820 None:intergenic 40.0%
CTTGTCTTTCCTGTGTATAC+GGG - Chr1:38975124-38975143 MsG0180002483.01.T02:five_prime_UTR 40.0%
CTTTCAAACACTGTCATGTG+AGG + Chr1:38964642-38964661 None:intergenic 40.0%
GAAGAGAGGAGAACAAAGAT+GGG + Chr1:38968203-38968222 None:intergenic 40.0%
GAATATATTCCACAGGTAGC+TGG - Chr1:38974590-38974609 MsG0180002483.01.T02:intron 40.0%
GATCCTTCAATTTATGGGCA+GGG - Chr1:38966043-38966062 MsG0180002483.01.T02:intron 40.0%
GATGATGTCTCTGTATCCAT+AGG + Chr1:38965649-38965668 None:intergenic 40.0%
GATGGATCAAAACACTGCAT+TGG + Chr1:38964791-38964810 None:intergenic 40.0%
GATTCCATCTTAACAGGCAT+GGG - Chr1:38973017-38973036 MsG0180002483.01.T02:CDS 40.0%
GCCATTCTAGCATCTAAAAG+TGG + Chr1:38965676-38965695 None:intergenic 40.0%
GCTAATCCTCTTAATCGTTG+AGG + Chr1:38966665-38966684 None:intergenic 40.0%
GCTATCCTAGATCTGTTGTA+GGG - Chr1:38967445-38967464 MsG0180002483.01.T02:intron 40.0%
GGGGTAGAAGTTAAGATTAG+TGG + Chr1:38967118-38967137 None:intergenic 40.0%
GGGTGAAAGAATAGTCAAGT+AGG + Chr1:38966949-38966968 None:intergenic 40.0%
GGTTAGGAGTCAAGAATGTT+AGG + Chr1:38967176-38967195 None:intergenic 40.0%
GTAGTGATAGCATTTAGAGG+AGG + Chr1:38965550-38965569 None:intergenic 40.0%
GTCAACCAATTGCAAACGAT+GGG - Chr1:38966711-38966730 MsG0180002483.01.T02:intron 40.0%
GTCATTTATGACAGAAGGGA+AGG - Chr1:38965113-38965132 MsG0180002483.01.T02:intron 40.0%
GTCTATCCTGTCACTATAGA+AGG - Chr1:38972953-38972972 MsG0180002483.01.T02:intron 40.0%
GTGAGTGAGTGAATGACATT+TGG - Chr1:38965162-38965181 MsG0180002483.01.T02:intron 40.0%
GTTAACGCCGTTCAAATATG+TGG + Chr1:38970949-38970968 None:intergenic 40.0%
GTTGACGGTTGAGAATTAGA+AGG + Chr1:38971231-38971250 None:intergenic 40.0%
TAAACAGATGTTGACAGCTC+TGG - Chr1:38967834-38967853 MsG0180002483.01.T02:intron 40.0%
TAACAAAAGGGCTATCTGAG+AGG - Chr1:38967759-38967778 MsG0180002483.01.T02:intron 40.0%
TAATGCCGCAGCATATTTAG+AGG - Chr1:38965342-38965361 MsG0180002483.01.T02:intron 40.0%
TACACAGGAAAGACAAGGAA+AGG + Chr1:38975121-38975140 None:intergenic 40.0%
TACAGGTAAAAACCGGTATC+CGG - Chr1:38973840-38973859 MsG0180002483.01.T02:intron 40.0%
TATGGTATGGGGAGAAAAAC+TGG - Chr1:38974758-38974777 MsG0180002483.01.T02:intron 40.0%
TATTCAGTGTACTAGGCTAG+TGG - Chr1:38970279-38970298 MsG0180002483.01.T02:intron 40.0%
TCACTACAGAAGGAATGCTA+GGG - Chr1:38965563-38965582 MsG0180002483.01.T02:intron 40.0%
TCAGGATTAAATCAGGGAGT+TGG - Chr1:38966369-38966388 MsG0180002483.01.T02:intron 40.0%
TCATTGTGTTAGGTGTGAAG+GGG - Chr1:38967605-38967624 MsG0180002483.01.T02:intron 40.0%
TCCAACTCCTTCATTGTGTT+GGG - Chr1:38967291-38967310 MsG0180002483.01.T02:intron 40.0%
TCCTTATCATGTGCACCAAT+CGG + Chr1:38972357-38972376 None:intergenic 40.0%
TCGAACACCTTCATTGTGTT+AGG - Chr1:38967595-38967614 MsG0180002483.01.T02:intron 40.0%
TCTAGTATCCGTATGGTATG+GGG - Chr1:38974747-38974766 MsG0180002483.01.T02:intron 40.0%
TCTATTCATACTCCTGGTGA+TGG - Chr1:38971255-38971274 MsG0180002483.01.T02:intron 40.0%
TGAAGAATCTGTAGCATGCT+CGG + Chr1:38971657-38971676 None:intergenic 40.0%
TGAAGAGAGGAGAACAAAGA+TGG + Chr1:38968204-38968223 None:intergenic 40.0%
TGACTGTATAGGTCCATTTC+AGG - Chr1:38971726-38971745 MsG0180002483.01.T02:intron 40.0%
TGAGCAGAAAACCAAATCCA+AGG - Chr1:38974351-38974370 MsG0180002483.01.T02:CDS 40.0%
TGATTCCATCTTAACAGGCA+TGG - Chr1:38973016-38973035 MsG0180002483.01.T02:CDS 40.0%
TGCAATCAAGAGATGAAGAG+AGG + Chr1:38968217-38968236 None:intergenic 40.0%
TGGAGATTCTGCCTTAATTG+TGG - Chr1:38967522-38967541 MsG0180002483.01.T02:intron 40.0%
TTAGGCAAAAGGCCGAAAAA+TGG + Chr1:38965783-38965802 None:intergenic 40.0%
TTCGTACTCTCAGTTAACAG+AGG + Chr1:38964596-38964615 None:intergenic 40.0%
TTTACCCATGCCTGTTAAGA+TGG + Chr1:38973024-38973043 None:intergenic 40.0%
TTTAGAGGAGGAGTTCCAAT+GGG + Chr1:38965538-38965557 None:intergenic 40.0%
! AAGTCTGGAATCACAAATGC+AGG - Chr1:38966079-38966098 MsG0180002483.01.T02:intron 40.0%
! ACTCGAAAGATTAAGTTGCC+GGG - Chr1:38973261-38973280 MsG0180002483.01.T02:intron 40.0%
! AGCTGTTGTTGTTGTTGTTG+TGG + Chr1:38966581-38966600 None:intergenic 40.0%
! ATGTAGGCCCTTTCCTTTTT+CGG + Chr1:38971164-38971183 None:intergenic 40.0%
! ATTTATGGTACTGAAGGAGC+AGG - Chr1:38971333-38971352 MsG0180002483.01.T02:intron 40.0%
! CACTCGAAAGATTAAGTTGC+CGG - Chr1:38973260-38973279 MsG0180002483.01.T02:intron 40.0%
! CTTTTGCCTAAACAGTCAGA+TGG - Chr1:38965792-38965811 MsG0180002483.01.T02:intron 40.0%
! GCAATCCCGTATTTTACACA+TGG + Chr1:38968015-38968034 None:intergenic 40.0%
! GCTGTCATTTCTCTTCAGAT+GGG - Chr1:38971802-38971821 MsG0180002483.01.T02:intron 40.0%
! GTTGGTAAAGCCCATTTACA+TGG + Chr1:38973758-38973777 None:intergenic 40.0%
! GTTTTTCTCCCCATACCATA+CGG + Chr1:38974758-38974777 None:intergenic 40.0%
! TCACCAGGAGTATGAATAGA+TGG + Chr1:38971255-38971274 None:intergenic 40.0%
! TGATTTGCACTTTGAAGGAG+AGG + Chr1:38966545-38966564 None:intergenic 40.0%
! TGCTGTCATTTCTCTTCAGA+TGG - Chr1:38971801-38971820 MsG0180002483.01.T02:intron 40.0%
! TGGCTCCTTAGATGATAATG+TGG - Chr1:38971565-38971584 MsG0180002483.01.T02:intron 40.0%
! TTATCTGAAGGCATGTTGAG+AGG + Chr1:38967013-38967032 None:intergenic 40.0%
! TTTTTGTACTTTGAACCCCC+TGG + Chr1:38969889-38969908 None:intergenic 40.0%
!! ACAAGATGATGGTGATGGAA+AGG - Chr1:38971601-38971620 MsG0180002483.01.T02:intron 40.0%
!! CGATTAAGAGGATTAGCTAG+AGG - Chr1:38966668-38966687 MsG0180002483.01.T02:intron 40.0%
!! CGGTTTTGTAAGGTTGACTT+AGG - Chr1:38967401-38967420 MsG0180002483.01.T02:intron 40.0%
!! GCTTTAGAGGCTTAAAGTGT+TGG - Chr1:38968308-38968327 MsG0180002483.01.T02:intron 40.0%
!! GGGTAAATTGTTCTGGGTTT+TGG - Chr1:38970240-38970259 MsG0180002483.01.T02:intron 40.0%
!! GGTGATGGAAAGGACTTATT+TGG - Chr1:38971611-38971630 MsG0180002483.01.T02:intron 40.0%
!! TAACACAATGAAGGTGTTCG+AGG + Chr1:38967596-38967615 None:intergenic 40.0%
!! TTAAGAGGATTAGCTAGAGG+AGG - Chr1:38966671-38966690 MsG0180002483.01.T02:intron 40.0%
!! TTGATTTACCAGCTGGTTTG+TGG + Chr1:38971373-38971392 None:intergenic 40.0%
AAGGTTTCTCCTGATCCAGT+AGG - Chr1:38965132-38965151 MsG0180002483.01.T02:intron 45.0%
AATCCTGGTCTAATGCCAAG+AGG + Chr1:38970100-38970119 None:intergenic 45.0%
AATGCAGCAATTGATGCTCC+TGG - Chr1:38965247-38965266 MsG0180002483.01.T02:intron 45.0%
ACACCTGAAAATCGTGCGTA+AGG - Chr1:38970821-38970840 MsG0180002483.01.T02:intron 45.0%
ACATTGTAGGGACCATTTGG+TGG + Chr1:38970005-38970024 None:intergenic 45.0%
ACCAGTTGCTGTGAATGCAA+AGG + Chr1:38970490-38970509 None:intergenic 45.0%
ACCCAACACAATGAAGGAGT+TGG + Chr1:38967295-38967314 None:intergenic 45.0%
ACTACACATGCCATGTCTCT+AGG + Chr1:38967346-38967365 None:intergenic 45.0%
AGAAAGCCAGAAAGGTAGTG+TGG - Chr1:38969546-38969565 MsG0180002483.01.T02:intron 45.0%
AGCAGAAAAGGCTCGTTCAA+CGG - Chr1:38968819-38968838 MsG0180002483.01.T02:intron 45.0%
AGGATAGACACGAGATACTC+AGG + Chr1:38973145-38973164 None:intergenic 45.0%
AGTGTACTAGGCTAGTGGTA+CGG - Chr1:38970284-38970303 MsG0180002483.01.T02:intron 45.0%
ATCATGTTGTTGCTGGGAGA+TGG + Chr1:38970467-38970486 None:intergenic 45.0%
CAACACAATGAAGGAGTTGG+AGG + Chr1:38967292-38967311 None:intergenic 45.0%
CAAGAAGACAGCAGACCAAA+TGG + Chr1:38974100-38974119 None:intergenic 45.0%
CACTCGAAAAGAAAACCACC+AGG + Chr1:38965268-38965287 None:intergenic 45.0%
CAGAAAGGTAGTGTGGAAGA+AGG - Chr1:38969553-38969572 MsG0180002483.01.T02:intron 45.0%
CAGACCAAATTCAACTCAGC+TGG - Chr1:38975007-38975026 MsG0180002483.01.T02:five_prime_UTR 45.0%
CAGTGTTTGACAATGAGGGT+AGG + Chr1:38970060-38970079 None:intergenic 45.0%
CCAAGCTCAGATGCAAAGAA+GGG - Chr1:38965498-38965517 MsG0180002483.01.T02:intron 45.0%
CCGTATACACAGGAAAGACA+AGG + Chr1:38975126-38975145 None:intergenic 45.0%
CCTTATCATGTGCACCAATC+GGG + Chr1:38972356-38972375 None:intergenic 45.0%
CGTAAGGACATTCAAAGTCG+TGG - Chr1:38970837-38970856 MsG0180002483.01.T02:intron 45.0%
CTCCAACTCCTTCATTGTGT+TGG - Chr1:38967290-38967309 MsG0180002483.01.T02:intron 45.0%
CTTCACACCCAACACAATGA+AGG + Chr1:38967301-38967320 None:intergenic 45.0%
CTTCATTGTGTTGGGTGTGA+AGG - Chr1:38967299-38967318 MsG0180002483.01.T02:intron 45.0%
CTTCTTCCACACTACCTTTC+TGG + Chr1:38969555-38969574 None:intergenic 45.0%
GAACTTGAGCTCCAAAACCT+GGG + Chr1:38966517-38966536 None:intergenic 45.0%
GAATGTTGCTGGTGTATCCA+AGG - Chr1:38971302-38971321 MsG0180002483.01.T02:intron 45.0%
GACCATATCTCTAGGCAATG+TGG + Chr1:38967641-38967660 None:intergenic 45.0%
GAGGTAGAAGACCTGTGATA+TGG - Chr1:38967778-38967797 MsG0180002483.01.T02:intron 45.0%
GATCCTAATCATCCTCCCAT+TGG - Chr1:38965520-38965539 MsG0180002483.01.T02:intron 45.0%
GATGAGATGAGAAGAGGAGA+TGG + Chr1:38968163-38968182 None:intergenic 45.0%
GCAAAGGATCATGTTGTTGC+TGG + Chr1:38970474-38970493 None:intergenic 45.0%
GGAGATGATGAGATGAGAAG+AGG + Chr1:38968169-38968188 None:intergenic 45.0%
GGAGCAGTGTTTGACAATGA+GGG + Chr1:38970064-38970083 None:intergenic 45.0%
GGATAGACACGAGATACTCA+GGG + Chr1:38973144-38973163 None:intergenic 45.0%
GGATCCTTCAATTTATGGGC+AGG - Chr1:38966042-38966061 MsG0180002483.01.T02:intron 45.0%
GGATTAAATCAGGGAGTTGG+TGG - Chr1:38966372-38966391 MsG0180002483.01.T02:intron 45.0%
GGCTATCCTAGATCTGTTGT+AGG - Chr1:38967444-38967463 MsG0180002483.01.T02:intron 45.0%
GGGAAATTATTAGCCAGTGC+TGG - Chr1:38971822-38971841 MsG0180002483.01.T02:intron 45.0%
GGGATGTGATGCAATAAGCA+AGG + Chr1:38967155-38967174 None:intergenic 45.0%
GGTAAAGAAGGACAGCCATT+TGG - Chr1:38974082-38974101 MsG0180002483.01.T02:CDS 45.0%
GGTGCACATGATAAGGAGAT+AGG - Chr1:38972360-38972379 MsG0180002483.01.T02:intron 45.0%
GTAGAGAGAAGGTTAGAGAG+AGG - Chr1:38969790-38969809 MsG0180002483.01.T02:intron 45.0%
GTCATGTGAGGAGGAGAATT+CGG + Chr1:38964630-38964649 None:intergenic 45.0%
GTGGTCTCACATTGAAAGGA+TGG - Chr1:38966391-38966410 MsG0180002483.01.T02:intron 45.0%
GTGTGTAGTCAGTAGAGAGA+AGG - Chr1:38969779-38969798 MsG0180002483.01.T02:intron 45.0%
GTTCCAATGGGAGGATGATT+AGG + Chr1:38965526-38965545 None:intergenic 45.0%
TCAAACACTGTCATGTGAGG+AGG + Chr1:38964639-38964658 None:intergenic 45.0%
TCATGTGAGGAGGAGAATTC+GGG + Chr1:38964629-38964648 None:intergenic 45.0%
TCCCACATTGCCTAGAGATA+TGG - Chr1:38967636-38967655 MsG0180002483.01.T02:intron 45.0%
TCCTTTGCATTCACAGCAAC+TGG - Chr1:38970486-38970505 MsG0180002483.01.T02:intron 45.0%
TCGACATTGTAGGGACCATT+TGG + Chr1:38970008-38970027 None:intergenic 45.0%
TCTCAGATTGCCTAGAGACA+TGG - Chr1:38967333-38967352 MsG0180002483.01.T02:intron 45.0%
TCTTGGCATTAGACCAGGAT+TGG - Chr1:38970099-38970118 MsG0180002483.01.T02:intron 45.0%
TGAACTTGAGCTCCAAAACC+TGG + Chr1:38966518-38966537 None:intergenic 45.0%
TGATACAACTGTGCGGCTTT+GGG - Chr1:38975043-38975062 MsG0180002483.01.T02:five_prime_UTR 45.0%
TGGAGCAGTGTTTGACAATG+AGG + Chr1:38970065-38970084 None:intergenic 45.0%
TGTGTTTGCGGCTGTGTATT+TGG + Chr1:38968112-38968131 None:intergenic 45.0%
TTGATACAACTGTGCGGCTT+TGG - Chr1:38975042-38975061 MsG0180002483.01.T02:five_prime_UTR 45.0%
TTTAGTCAGTGCACCTTGTC+TGG - Chr1:38966776-38966795 MsG0180002483.01.T02:intron 45.0%
TTTCGCTTTAATGCAGCTGC+TGG - Chr1:38965382-38965401 MsG0180002483.01.T02:intron 45.0%
TTTCTCCAAACTCTTCGCCT+TGG + Chr1:38967932-38967951 None:intergenic 45.0%
! AAGATTAAGTTGCCGGGTCA+AGG - Chr1:38973267-38973286 MsG0180002483.01.T02:intron 45.0%
! ACACGAGATACTCAGGGTTT+TGG + Chr1:38973138-38973157 None:intergenic 45.0%
! ACCCCTGTATGTGTTTCTGT+TGG - Chr1:38965877-38965896 MsG0180002483.01.T02:intron 45.0%
! ACGTTTAGTGGATGACTGGA+TGG + Chr1:38970920-38970939 None:intergenic 45.0%
! CAAAGATGGGTTCTGCAATC+AGG + Chr1:38968190-38968209 None:intergenic 45.0%
! CATTTTTGCAGCCAAAGCAG+TGG + Chr1:38965599-38965618 None:intergenic 45.0%
! CGGATGTTGGCATGTTTTTC+TGG - Chr1:38974688-38974707 MsG0180002483.01.T02:intron 45.0%
! CTCTAAGAGTATAGTGCACC+CGG + Chr1:38971422-38971441 None:intergenic 45.0%
! CTCTCACAAGATGATGGTGA+TGG - Chr1:38971596-38971615 MsG0180002483.01.T02:intron 45.0%
! GAACAAATTCGCCCAGGTTT+TGG - Chr1:38966503-38966522 MsG0180002483.01.T02:intron 45.0%
! GACAGCTCTGGTCTCAATAA+CGG - Chr1:38967846-38967865 MsG0180002483.01.T02:intron 45.0%
! GCGTCGTGTCTTACTGTTTT+TGG + Chr1:38967903-38967922 None:intergenic 45.0%
! GTTGCCAGCTGAGTTGAATT+TGG + Chr1:38975014-38975033 None:intergenic 45.0%
! TCTAAATTTTCCTCCTCGGC+AGG - Chr1:38965970-38965989 MsG0180002483.01.T02:intron 45.0%
! TCTAAGAGTATAGTGCACCC+GGG + Chr1:38971421-38971440 None:intergenic 45.0%
! TGTCCTTACGCACGATTTTC+AGG + Chr1:38970827-38970846 None:intergenic 45.0%
!! AAAACCGGCTTGTAAGGTGA+GGG + Chr1:38967388-38967407 None:intergenic 45.0%
!! CAGGATGGCTTGGAACATTT+TGG - Chr1:38971536-38971555 MsG0180002483.01.T02:intron 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + Chr1:38967394-38967413 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - Chr1:38967391-38967410 MsG0180002483.01.T02:intron 45.0%
!! CTGGTGGTTTTCTTTTCGAG+TGG - Chr1:38965266-38965285 MsG0180002483.01.T02:intron 45.0%
!! CTGGTGTTTGGTGCATCAAT+AGG - Chr1:38972414-38972433 MsG0180002483.01.T02:intron 45.0%
!! GAGATGGATTGTTGCATCTG+TGG + Chr1:38970451-38970470 None:intergenic 45.0%
!! GAGGTGCCATCTTCTGAAAT+CGG - Chr1:38968677-38968696 MsG0180002483.01.T02:intron 45.0%
!! GGCTGTGTATTTGGTTCTGA+TGG + Chr1:38968103-38968122 None:intergenic 45.0%
!! GTTGGTGGTCTCACATTGAA+AGG - Chr1:38966387-38966406 MsG0180002483.01.T02:intron 45.0%
!! TCTGGGACATTTTTATCGCG+AGG - Chr1:38965299-38965318 MsG0180002483.01.T02:intron 45.0%
!!! GTGGTTTTCTTTTCGAGTGG+TGG - Chr1:38965269-38965288 MsG0180002483.01.T02:intron 45.0%
!!! GTTTTAGTTGCAGGATGGCT+TGG - Chr1:38971526-38971545 MsG0180002483.01.T02:intron 45.0%
!! TTTATTATATTATATTATGT+GGG - Chr1:38971941-38971960 MsG0180002483.01.T02:intron 5.0%
AAGAACTAGCCAGCTACCTG+TGG + Chr1:38974602-38974621 None:intergenic 50.0%
AATCTGTAGCATGCTCGGCA+GGG + Chr1:38971652-38971671 None:intergenic 50.0%
AATGCCAAGAGGAGGGCAAA+CGG + Chr1:38970089-38970108 None:intergenic 50.0%
AATGCCGCAATTAGGCAGCT+AGG + Chr1:38967554-38967573 None:intergenic 50.0%
ACAACAACAGCTCCTTGCTC+AGG - Chr1:38966589-38966608 MsG0180002483.01.T02:intron 50.0%
ACACTCCAAGGCGAAGAGTT+TGG - Chr1:38967924-38967943 MsG0180002483.01.T02:CDS 50.0%
ACCCAAATGCCGCAATTAGG+CGG + Chr1:38967255-38967274 None:intergenic 50.0%
ACTCACTCACCTACTGGATC+AGG + Chr1:38965144-38965163 None:intergenic 50.0%
AGCAGCTTTGCAGCAAATGC+AGG - Chr1:38965840-38965859 MsG0180002483.01.T02:intron 50.0%
AGCTGCCTAATTGCGGCATT+TGG - Chr1:38967554-38967573 MsG0180002483.01.T02:intron 50.0%
AGGAAAGGGCCTACATCTTC+AGG - Chr1:38971168-38971187 MsG0180002483.01.T02:intron 50.0%
AGGTAGTGTGGAAGAAGGCA+CGG - Chr1:38969558-38969577 MsG0180002483.01.T02:intron 50.0%
ATCTCAAGGCAGCAGATCTC+AGG - Chr1:38969735-38969754 MsG0180002483.01.T02:intron 50.0%
ATGCCGCAATTAGGCAGCTA+GGG + Chr1:38967553-38967572 None:intergenic 50.0%
CAAAGAGGAAAGGAGATGCG+CGG - Chr1:38969669-38969688 MsG0180002483.01.T02:intron 50.0%
CACTGCATTGGGATGGATCA+TGG + Chr1:38964779-38964798 None:intergenic 50.0%
CATGCAGAGATCCTTACCTG+TGG - Chr1:38966021-38966040 MsG0180002483.01.T02:intron 50.0%
CCCGATTGGTGCACATGATA+AGG - Chr1:38972353-38972372 MsG0180002483.01.T02:intron 50.0%
CCCTTCTTTGCATCTGAGCT+TGG + Chr1:38965501-38965520 None:intergenic 50.0%
CCTCCCTGCCCATAAATTGA+AGG + Chr1:38966049-38966068 None:intergenic 50.0%
CCTTCAATTTATGGGCAGGG+AGG - Chr1:38966046-38966065 MsG0180002483.01.T02:intron 50.0%
CGGAGCTACATAGTAGTGAG+GGG + Chr1:38969962-38969981 None:intergenic 50.0%
CTCTACAATTGCTCCCTACG+AGG - Chr1:38968658-38968677 MsG0180002483.01.T02:intron 50.0%
CTGGTCTAATGCCAAGAGGA+GGG + Chr1:38970096-38970115 None:intergenic 50.0%
CTTCTTGTCATGTCCAGCAC+TGG + Chr1:38971838-38971857 None:intergenic 50.0%
CTTGCTCAGGTACATGCACA+AGG - Chr1:38966602-38966621 MsG0180002483.01.T02:intron 50.0%
CTTGTGCATGTACCTGAGCA+AGG + Chr1:38966604-38966623 None:intergenic 50.0%
GAACACAGCATGACCAATCC+TGG + Chr1:38970115-38970134 None:intergenic 50.0%
GAGCGAAGCGGGTATTAAGT+GGG - Chr1:38967977-38967996 MsG0180002483.01.T02:CDS 50.0%
GCAACCCAAATGCCGCAATT+AGG + Chr1:38967258-38967277 None:intergenic 50.0%
GCAATCTACTGCCACTGCTT+TGG - Chr1:38965585-38965604 MsG0180002483.01.T02:intron 50.0%
GCATTGGGATGGATCATGGA+TGG + Chr1:38964775-38964794 None:intergenic 50.0%
GCCAAGCTCAGATGCAAAGA+AGG - Chr1:38965497-38965516 MsG0180002483.01.T02:intron 50.0%
GCGGAGCTACATAGTAGTGA+GGG + Chr1:38969963-38969982 None:intergenic 50.0%
GCTGCCTAATTGCGGCATTT+GGG - Chr1:38967555-38967574 MsG0180002483.01.T02:intron 50.0%
GGAAGCCCTACAACAGATCT+AGG + Chr1:38967453-38967472 None:intergenic 50.0%
GGAGCTACATAGTAGTGAGG+GGG + Chr1:38969961-38969980 None:intergenic 50.0%
GGAGGATTGCAGTCAAAGTC+TGG - Chr1:38966064-38966083 MsG0180002483.01.T02:intron 50.0%
GGAGTTGGAGGATGCAATGA+AGG + Chr1:38967280-38967299 None:intergenic 50.0%
GGCAACTTGCAGAATGTTGC+TGG - Chr1:38971291-38971310 MsG0180002483.01.T02:intron 50.0%
GGCATAGAACAAATTCGCCC+AGG - Chr1:38966497-38966516 MsG0180002483.01.T02:intron 50.0%
GGCGAAGAGTTTGGAGAAAG+CGG - Chr1:38967933-38967952 MsG0180002483.01.T02:CDS 50.0%
GGGAGAGAGACAAAGAGGAA+AGG - Chr1:38969659-38969678 MsG0180002483.01.T02:intron 50.0%
GTCTCAATAACGGCCACTAC+AGG - Chr1:38967856-38967875 MsG0180002483.01.T02:intron 50.0%
GTTCTGCTATGTAGCAGCAG+AGG - Chr1:38972670-38972689 MsG0180002483.01.T02:intron 50.0%
TCACTCACTCACTCACCTAC+TGG + Chr1:38965150-38965169 None:intergenic 50.0%
TCAGAAGATGGCACCTCGTA+GGG + Chr1:38968674-38968693 None:intergenic 50.0%
TCAGGAGCTGCCAATAGTAC+TGG - Chr1:38971186-38971205 MsG0180002483.01.T02:intron 50.0%
TCTCAAGGCAGCAGATCTCA+GGG - Chr1:38969736-38969755 MsG0180002483.01.T02:intron 50.0%
TGCATCTTCCACAAACCAGC+TGG - Chr1:38971362-38971381 MsG0180002483.01.T02:intron 50.0%
TGGGATGGATCATGGATGGA+TGG + Chr1:38964771-38964790 None:intergenic 50.0%
TTCAGAAGATGGCACCTCGT+AGG + Chr1:38968675-38968694 None:intergenic 50.0%
TTGGAGAAAGCGGCTGAAGT+GGG - Chr1:38967943-38967962 MsG0180002483.01.T02:CDS 50.0%
TTGGCAGCTCCTGAAGATGT+AGG + Chr1:38971180-38971199 None:intergenic 50.0%
TTGTGTTAGGTGTGAAGGGG+TGG - Chr1:38967608-38967627 MsG0180002483.01.T02:intron 50.0%
TTGTGTTGGGTGTGAAGGTG+TGG - Chr1:38967304-38967323 MsG0180002483.01.T02:intron 50.0%
TTTGGAGAAAGCGGCTGAAG+TGG - Chr1:38967942-38967961 MsG0180002483.01.T02:CDS 50.0%
! CAGTGCTGGACATGACAAGA+AGG - Chr1:38971836-38971855 MsG0180002483.01.T02:intron 50.0%
! CGAGTGGTGGTCTGTTTTCT+GGG - Chr1:38965282-38965301 MsG0180002483.01.T02:intron 50.0%
! CTTTTGATATCCTGCCGAGG+AGG + Chr1:38965983-38966002 None:intergenic 50.0%
! GCATTCACAGCAACTGGTTC+AGG - Chr1:38970492-38970511 MsG0180002483.01.T02:intron 50.0%
! TATGGTACTGAAGGAGCAGG+CGG - Chr1:38971336-38971355 MsG0180002483.01.T02:intron 50.0%
! TCAACGGTTGCTGTTGCAAC+AGG - Chr1:38968835-38968854 MsG0180002483.01.T02:intron 50.0%
! TCGAGTGGTGGTCTGTTTTC+TGG - Chr1:38965281-38965300 MsG0180002483.01.T02:intron 50.0%
! TTATTGGCCTGAGCTTGAGG+AGG - Chr1:38967494-38967513 MsG0180002483.01.T02:intron 50.0%
! TTTTCCGACGGCAGATCTCA+AGG - Chr1:38969721-38969740 MsG0180002483.01.T02:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + Chr1:38967389-38967408 None:intergenic 50.0%
!! GCTGCCAATAGTACTGGTAC+AGG - Chr1:38971192-38971211 MsG0180002483.01.T02:intron 50.0%
!! TCCTGGTGATGGAGTTGCTA+TGG - Chr1:38971266-38971285 MsG0180002483.01.T02:intron 50.0%
!! TCGCTTTTGATATCCTGCCG+AGG + Chr1:38965986-38966005 None:intergenic 50.0%
!! TGGTGATGGAGTTGCTATGG+CGG - Chr1:38971269-38971288 MsG0180002483.01.T02:intron 50.0%
AAGTATGAACCCCCTGGTCC+AGG + Chr1:38968517-38968536 None:intergenic 55.0%
AATGCCGCAATTAGGCGGCT+AGG + Chr1:38967250-38967269 None:intergenic 55.0%
ACCATCCGTCAACCTTGACC+CGG + Chr1:38973282-38973301 None:intergenic 55.0%
AGACACGACGCAACACTCCA+AGG - Chr1:38967912-38967931 MsG0180002483.01.T02:CDS 55.0%
AGAGGAGGAGTTCCAATGGG+AGG + Chr1:38965535-38965554 None:intergenic 55.0%
AGCCGCCTAATTGCGGCATT+TGG - Chr1:38967250-38967269 MsG0180002483.01.T02:intron 55.0%
AGGCCAATAAGCCTGAAGCG+TGG + Chr1:38967484-38967503 None:intergenic 55.0%
AGTGCGGGAGAGAGACAAAG+AGG - Chr1:38969654-38969673 MsG0180002483.01.T02:intron 55.0%
AGTTGCCGGGTCAAGGTTGA+CGG - Chr1:38973274-38973293 MsG0180002483.01.T02:intron 55.0%
ATGCCAAGAGGAGGGCAAAC+GGG + Chr1:38970088-38970107 None:intergenic 55.0%
ATGCCGCAATTAGGCGGCTA+GGG + Chr1:38967249-38967268 None:intergenic 55.0%
ATTAGTGCAGTGGCGTTGCC+AGG - Chr1:38968489-38968508 MsG0180002483.01.T02:CDS 55.0%
CCTCCTCTTGGCATTAGACC+AGG - Chr1:38970094-38970113 MsG0180002483.01.T02:intron 55.0%
CCTGGTCTAATGCCAAGAGG+AGG + Chr1:38970097-38970116 None:intergenic 55.0%
CGTCCACGCTTCAGGCTTAT+TGG - Chr1:38967478-38967497 MsG0180002483.01.T02:intron 55.0%
CTAGGGGCGGACCACAATTA+AGG + Chr1:38967536-38967555 None:intergenic 55.0%
GAATCTGTAGCATGCTCGGC+AGG + Chr1:38971653-38971672 None:intergenic 55.0%
GCAACCCTCACCTTACAAGC+CGG - Chr1:38967381-38967400 MsG0180002483.01.T02:intron 55.0%
GCAGCAATTGATGCTCCTGG+TGG - Chr1:38965250-38965269 MsG0180002483.01.T02:intron 55.0%
GCCATAGCAACTCCATCACC+AGG + Chr1:38971270-38971289 None:intergenic 55.0%
GCCGCCTAATTGCGGCATTT+GGG - Chr1:38967251-38967270 MsG0180002483.01.T02:intron 55.0%
GGAGCGAAGCGGGTATTAAG+TGG - Chr1:38967976-38967995 MsG0180002483.01.T02:CDS 55.0%
GGCGGAGCTACATAGTAGTG+AGG + Chr1:38969964-38969983 None:intergenic 55.0%
GGTGTTCGAGGTTGCAACGA+TGG + Chr1:38967584-38967603 None:intergenic 55.0%
GTGGCGCGGACACTAATACA+GGG + Chr1:38969986-38970005 None:intergenic 55.0%
GTTCGCAAGTATGAACCCCC+TGG + Chr1:38968523-38968542 None:intergenic 55.0%
TCATGCACCATGGCCAGACA+AGG + Chr1:38966792-38966811 None:intergenic 55.0%
TGCACCAATCGGGCCGTAAT+AGG + Chr1:38972346-38972365 None:intergenic 55.0%
TGCCGCAATTAGGCAGCTAG+GGG + Chr1:38967552-38967571 None:intergenic 55.0%
TGCTCCTATTACGGCCCGAT+TGG - Chr1:38972339-38972358 MsG0180002483.01.T02:intron 55.0%
TGGCGCGGACACTAATACAG+GGG + Chr1:38969985-38970004 None:intergenic 55.0%
TTAGTGTCCGCGCCACCAAA+TGG - Chr1:38969990-38970009 MsG0180002483.01.T02:intron 55.0%
TTCCCCTAGCCGCCTAATTG+CGG - Chr1:38967243-38967262 MsG0180002483.01.T02:intron 55.0%
! GCGGTCTGTTAGCTTAGTGG+TGG - Chr1:38969688-38969707 MsG0180002483.01.T02:intron 55.0%
! GGCTTATTGGCCTGAGCTTG+AGG - Chr1:38967491-38967510 MsG0180002483.01.T02:intron 55.0%
! GTTAGCTTAGTGGTGGTGCG+CGG - Chr1:38969695-38969714 MsG0180002483.01.T02:intron 55.0%
! TGCGCGGTCTGTTAGCTTAG+TGG - Chr1:38969685-38969704 MsG0180002483.01.T02:intron 55.0%
! TGGAAGAAGGCACGGTCTGT+TGG - Chr1:38969566-38969585 MsG0180002483.01.T02:intron 55.0%
!! GGTGATGGAGTTGCTATGGC+GGG - Chr1:38971270-38971289 MsG0180002483.01.T02:intron 55.0%
AGCCTGAAGCGTGGACGATG+CGG + Chr1:38967475-38967494 None:intergenic 60.0%
CACCACACCTCCTCAAGCTC+AGG + Chr1:38967504-38967523 None:intergenic 60.0%
CAGTGCACCTTGTCTGGCCA+TGG - Chr1:38966782-38966801 MsG0180002483.01.T02:intron 60.0%
CGCAATTAGGCAGCTAGGGG+CGG + Chr1:38967549-38967568 None:intergenic 60.0%
CGCCCCTAGCTGCCTAATTG+CGG - Chr1:38967547-38967566 MsG0180002483.01.T02:intron 60.0%
CGCGGACACTAATACAGGGG+CGG + Chr1:38969982-38970001 None:intergenic 60.0%
GAAAACGCAGAGCACGCCAG+AGG - Chr1:38974953-38974972 MsG0180002483.01.T02:five_prime_UTR 60.0%
GCTAGGGGAAGACCGCAATG+AGG + Chr1:38967233-38967252 None:intergenic 60.0%
GCTGCCTTGAGATCTGCCGT+CGG + Chr1:38969728-38969747 None:intergenic 60.0%
GGTGGCGCGGACACTAATAC+AGG + Chr1:38969987-38970006 None:intergenic 60.0%
GTTGCCAGGAACCTGGACCA+GGG - Chr1:38968503-38968522 MsG0180002483.01.T02:CDS 60.0%
TGCCGCAATTAGGCGGCTAG+GGG + Chr1:38967248-38967267 None:intergenic 60.0%
TTGCCAGGAACCTGGACCAG+GGG - Chr1:38968504-38968523 MsG0180002483.01.T02:CDS 60.0%
! CTGAGCTTGAGGAGGTGTGG+TGG - Chr1:38967502-38967521 MsG0180002483.01.T02:intron 60.0%
!! GTAGGGACCATTTGGTGGCG+CGG + Chr1:38970000-38970019 None:intergenic 60.0%
!! GTCTGTTGGTAGTGCGCGTG+CGG - Chr1:38969580-38969599 MsG0180002483.01.T02:intron 60.0%
AACCCCCTGGTCCAGGTTCC+TGG + Chr1:38968510-38968529 None:intergenic 65.0%
CAGTGGCGTTGCCAGGAACC+TGG - Chr1:38968496-38968515 MsG0180002483.01.T02:CDS 65.0%
CCAAGAGGAGGGCAAACGGG+TGG + Chr1:38970085-38970104 None:intergenic 65.0%
CCACCCGTTTGCCCTCCTCT+TGG - Chr1:38970082-38970101 MsG0180002483.01.T02:intron 65.0%
CGCCACGATAGCGCCTGTAG+TGG + Chr1:38967872-38967891 None:intergenic 65.0%
CGCGATTGGTGGAGCGAAGC+GGG - Chr1:38967966-38967985 MsG0180002483.01.T02:CDS 65.0%
CGTTGCCAGGAACCTGGACC+AGG - Chr1:38968502-38968521 MsG0180002483.01.T02:CDS 65.0%
CTACAGGCGCTATCGTGGCG+CGG - Chr1:38967872-38967891 MsG0180002483.01.T02:intron 65.0%
GCCGGGTCAAGGTTGACGGA+TGG - Chr1:38973278-38973297 MsG0180002483.01.T02:intron 65.0%
GCCTGAAGCGTGGACGATGC+GGG + Chr1:38967474-38967493 None:intergenic 65.0%
GCGCGATTGGTGGAGCGAAG+CGG - Chr1:38967965-38967984 MsG0180002483.01.T02:CDS 65.0%
GCTGAAGTGGGCGCGATTGG+TGG - Chr1:38967955-38967974 MsG0180002483.01.T02:CDS 65.0%
GGCCACTACAGGCGCTATCG+TGG - Chr1:38967867-38967886 MsG0180002483.01.T02:intron 65.0%
GGCCTGAGCTTGAGGAGGTG+TGG - Chr1:38967499-38967518 MsG0180002483.01.T02:intron 65.0%
GGGGGTTCAACTGAACCCCC+TGG + Chr1:38969943-38969962 None:intergenic 65.0%
TCCCGCATCGTCCACGCTTC+AGG - Chr1:38967470-38967489 MsG0180002483.01.T02:intron 65.0%
TGCCAGGAACCTGGACCAGG+GGG - Chr1:38968505-38968524 MsG0180002483.01.T02:CDS 65.0%
! AGCTTAGTGGTGGTGCGCGG+TGG - Chr1:38969698-38969717 MsG0180002483.01.T02:intron 65.0%
! GGTGCGCGGTGGTTTTCCGA+CGG - Chr1:38969709-38969728 MsG0180002483.01.T02:intron 65.0%
!! GTTGGTAGTGCGCGTGCGGT+GGG - Chr1:38969584-38969603 MsG0180002483.01.T02:intron 65.0%
!! TGTTGGTAGTGCGCGTGCGG+TGG - Chr1:38969583-38969602 MsG0180002483.01.T02:intron 65.0%
GCGGCTGAAGTGGGCGCGAT+TGG - Chr1:38967952-38967971 MsG0180002483.01.T02:CDS 70.0%
GGCGCTATCGTGGCGCGGAG+CGG - Chr1:38967877-38967896 MsG0180002483.01.T02:intron 75.0%
GGTAGTGCGCGTGCGGTGGG+CGG - Chr1:38969587-38969606 MsG0180002483.01.T02:intron 75.0%
! AGTGCGCGTGCGGTGGGCGG+TGG - Chr1:38969590-38969609 MsG0180002483.01.T02:intron 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 38964590 38975169 38964590 ID=MsG0180002483.01;Name=MsG0180002483.01
Chr1 mRNA 38964590 38975169 38964590 ID=MsG0180002483.01.T01;Parent=MsG0180002483.01;Name=MsG0180002483.01.T01;_AED=0.49;_eAED=0.49;_QI=267|1|0.84|1|0.83|0.76|13|0|634
Chr1 exon 38974800 38974868 38974800 ID=MsG0180002483.01.T01:exon:12459;Parent=MsG0180002483.01.T01
Chr1 five_prime_UTR 38974940 38975169 38974940 ID=MsG0180002483.01.T01:five_prime_utr;Parent=MsG0180002483.01.T01
Chr1 five_prime_UTR 38974832 38974868 38974832 ID=MsG0180002483.01.T01:five_prime_utr;Parent=MsG0180002483.01.T01
Chr1 CDS 38974800 38974831 38974800 ID=MsG0180002483.01.T01:cds;Parent=MsG0180002483.01.T01
Chr1 CDS 38974606 38974703 38974606 ID=MsG0180002483.01.T01:cds;Parent=MsG0180002483.01.T01
Chr1 CDS 38974037 38974505 38974037 ID=MsG0180002483.01.T01:cds;Parent=MsG0180002483.01.T01
Chr1 CDS 38973877 38973952 38973877 ID=MsG0180002483.01.T01:cds;Parent=MsG0180002483.01.T01
Chr1 CDS 38973659 38973767 38973659 ID=MsG0180002483.01.T01:cds;Parent=MsG0180002483.01.T01
Chr1 CDS 38973337 38973386 38973337 ID=MsG0180002483.01.T01:cds;Parent=MsG0180002483.01.T01
Chr1 CDS 38972990 38973262 38972990 ID=MsG0180002483.01.T01:cds;Parent=MsG0180002483.01.T01
Chr1 CDS 38969246 38969320 38969246 ID=MsG0180002483.01.T01:cds;Parent=MsG0180002483.01.T01
Chr1 CDS 38968376 38968603 38968376 ID=MsG0180002483.01.T01:cds;Parent=MsG0180002483.01.T01
Chr1 CDS 38968079 38968220 38968079 ID=MsG0180002483.01.T01:cds;Parent=MsG0180002483.01.T01
Chr1 CDS 38967902 38968011 38967902 ID=MsG0180002483.01.T01:cds;Parent=MsG0180002483.01.T01
Chr1 CDS 38964590 38964832 38964590 ID=MsG0180002483.01.T01:cds;Parent=MsG0180002483.01.T01
Chr1 mRNA 38964590 38975169 38964590 ID=MsG0180002483.01.T02;Parent=MsG0180002483.01;Name=MsG0180002483.01.T02;_AED=0.49;_eAED=0.49;_QI=255|1|0.84|1|0.83|0.76|13|0|634
Chr1 exon 38974800 38974856 38974800 ID=MsG0180002483.01.T02:exon:12471;Parent=MsG0180002483.01.T02
Chr1 five_prime_UTR 38974940 38975169 38974940 ID=MsG0180002483.01.T02:five_prime_utr;Parent=MsG0180002483.01.T02
Chr1 five_prime_UTR 38974832 38974856 38974832 ID=MsG0180002483.01.T02:five_prime_utr;Parent=MsG0180002483.01.T02
Chr1 CDS 38974800 38974831 38974800 ID=MsG0180002483.01.T02:cds;Parent=MsG0180002483.01.T02
Chr1 CDS 38974606 38974703 38974606 ID=MsG0180002483.01.T02:cds;Parent=MsG0180002483.01.T02
Chr1 CDS 38974037 38974505 38974037 ID=MsG0180002483.01.T02:cds;Parent=MsG0180002483.01.T02
Chr1 CDS 38973877 38973952 38973877 ID=MsG0180002483.01.T02:cds;Parent=MsG0180002483.01.T02
Chr1 CDS 38973659 38973767 38973659 ID=MsG0180002483.01.T02:cds;Parent=MsG0180002483.01.T02
Chr1 CDS 38973337 38973386 38973337 ID=MsG0180002483.01.T02:cds;Parent=MsG0180002483.01.T02
Chr1 CDS 38972990 38973262 38972990 ID=MsG0180002483.01.T02:cds;Parent=MsG0180002483.01.T02
Chr1 CDS 38969246 38969320 38969246 ID=MsG0180002483.01.T02:cds;Parent=MsG0180002483.01.T02
Chr1 CDS 38968376 38968603 38968376 ID=MsG0180002483.01.T02:cds;Parent=MsG0180002483.01.T02
Chr1 CDS 38968079 38968220 38968079 ID=MsG0180002483.01.T02:cds;Parent=MsG0180002483.01.T02
Chr1 CDS 38967902 38968011 38967902 ID=MsG0180002483.01.T02:cds;Parent=MsG0180002483.01.T02
Chr1 CDS 38964590 38964832 38964590 ID=MsG0180002483.01.T02:cds;Parent=MsG0180002483.01.T02
Gene Sequence

>MsG0180002483.01.T01

ATGGCGCAGAGTAATTGGGAAGCAGATAAGATGCTTGATGTTTACATATATGATTATTTGGTTAAGAAAAAGTTGCACAATACTGCTAAGTCATTTATGACAGAAGGGAAGGTTTCTCCTGATCCAGTAGCAATTGATGCTCCTGGTGGTTTTCTTTTCGAGTGGTGGTCTGTTTTCTGGGACATTTTTATCGCGAGGACAAATGAGAAACATTCTGATAATGCCGCAGCATATTTAGAGGTACTTCCCTACTCTTCGTTTCGCTTTAATGCAGCTGCTGGATACAAAATTTTATATTTTTTTTGTGAACTGAAGGCTCAACAGCTTAAAGCGAAAGAACAACAATTGCAAATGCAACAGTTGCAATTAATGCGCCAAGCTCAGATGCAAAGAAGGGATCCTAATCATCCTCCCATTGGAACTCCTCCTCTAAATGCTATCACTACAGAAGGAATGCTAGGGCAATCTACTGCCACTGCTTTGGCTGCAAAAATGTATGAGGATCGGATGAAAAACTCTAACCCTATGGATACAGAGACATCATCCCAACCACTTTTAGATGCTAGAATGGCCCTTTTGAAATCAACAAATCATCCTGGTCAGATGGTTCAAGGAAATTCAGTAAGTGTGACAGCAGCTTTGCAGCAAATGCAGGCTCGAACTCAGCAAACCCCTGATATCAAAAGCGAAGTCAACATGGGAAACATGCAGAGATCCTTACCTGTGGATCCTTCAATTTATGGGCAGGGAGGATTGCAGTCAAAGTCTGGAATCACAAATGCAGGATTAAATCAGGGAGTTGGTGGTCTCACATTGAAAGGATGGCCTTTAACTGGCATAGAACAAATTCGCCCAGGTTTTGGAGCTCAAGTTCAAAAGCCTCTCCTTCAAAGTGCAAATCAGTTTCAGCTTTTGCCACAACAACAACAACAACAGCTCCTTGCTCAGGTACATGCACAAGGAAATATTGGCAATTCACAAGTGTATGGAGATATGGATCCTCAACGATTAAGAGGATTAGCTAGAGGAGGTTTGAATGTGAAAGACAGTCAACCAATTGCAAACGATGGGTCAATAGGTTCTCCAATGCAATCTACTTCATCTAAGATCAACATGCCACAGATGCAACAATCCATCTCCCAGCAACAACATGATCCTTTGCATTCACAGCAACTGGTTCAGAATAACCGAAAAAGGAAAGGGCCTACATCTTCAGGAGCTGCCAATAGTACTGGTACAGGAAATACACTTGGCCCTTCTAATTCTCAACCGTCAACTCCATCTATTCATACTCCTGGTGATGGAGTTGCTATGGCGGGCAACTTGCAGAATGTTGCTGGTGTATCCAAGGGTTTGATGATTTATGGTACTGAAGGAGCAGGCGGTCTTGCATCTTCCACAAACCAGCTGGATGGCTTGGAACATTTTGGAGATGTTGGCTCCTTAGATGATAATGTGGAATCATTTCTCTCACAAGATGATGGTGATGGAAAGGACTTATTTGGGACGTTGAAACGGAACCCTGCCGAGCATGCTACAGATTCTTCAAAAGGCTTTTCCTTCAGTGAAGTTAGTTCTATACGCAAAAGCAATGGAAAAGTTGTTTGCTGTCATTTCTCTTCAGATGGGAAATTATTAGCCAGTGCTGGACATGACAAGAAGGTTGTTCTTTGGAACATGGAGACACTGAAAACGCAGAGCACGCCAGAGGAACACACTGTTATTATTACTGACGTTCGCTTCAGACCAAATTCAACTCAGCTGGCAACATCTTCGTTTGATACAACTGTGCGGCTTTGGGATGCTGCTGATGTAATTTTTTATTTTAATTCTCTTTTAACTGTTAGTGTTGGCCTTTCCTTGTCTTTCCTGTGTATACGGGATTATAACATGCTTTCGTTCTAA

>MsG0180002483.01.T02

ATGGCGCAGAGTAATTGGGAAGCAGATAAGATGCTTGATGTTTACATATATGATTATTTGGTTAAGAAAAAGTTGCACAATACTGCTAAGTCATTTATGACAGAAGGGAAGGTTTCTCCTGATCCAGTAGCAATTGATGCTCCTGGTGGTTTTCTTTTCGAGTGGTGGTCTGTTTTCTGGGACATTTTTATCGCGAGGACAAATGAGAAACATTCTGATAATGCCGCAGCATATTTAGAGGTACTTCCCTACTCTTCGTTTCGCTTTAATGCAGCTGCTGGATACAAAATTTTATATTTTTTTTGTGAACTGAAGGCTCAACAGCTTAAAGCGAAAGAACAACAATTGCAAATGCAACAGTTGCAATTAATGCGCCAAGCTCAGATGCAAAGAAGGGATCCTAATCATCCTCCCATTGGAACTCCTCCTCTAAATGCTATCACTACAGAAGGAATGCTAGGGCAATCTACTGCCACTGCTTTGGCTGCAAAAATGTATGAGGATCGGATGAAAAACTCTAACCCTATGGATACAGAGACATCATCCCAACCACTTTTAGATGCTAGAATGGCCCTTTTGAAATCAACAAATCATCCTGGTCAGATGGTTCAAGGAAATTCAGTAAGTGTGACAGCAGCTTTGCAGCAAATGCAGGCTCGAACTCAGCAAACCCCTGATATCAAAAGCGAAGTCAACATGGGAAACATGCAGAGATCCTTACCTGTGGATCCTTCAATTTATGGGCAGGGAGGATTGCAGTCAAAGTCTGGAATCACAAATGCAGGATTAAATCAGGGAGTTGGTGGTCTCACATTGAAAGGATGGCCTTTAACTGGCATAGAACAAATTCGCCCAGGTTTTGGAGCTCAAGTTCAAAAGCCTCTCCTTCAAAGTGCAAATCAGTTTCAGCTTTTGCCACAACAACAACAACAACAGCTCCTTGCTCAGGTACATGCACAAGGAAATATTGGCAATTCACAAGTGTATGGAGATATGGATCCTCAACGATTAAGAGGATTAGCTAGAGGAGGTTTGAATGTGAAAGACAGTCAACCAATTGCAAACGATGGGTCAATAGGTTCTCCAATGCAATCTACTTCATCTAAGATCAACATGCCACAGATGCAACAATCCATCTCCCAGCAACAACATGATCCTTTGCATTCACAGCAACTGGTTCAGAATAACCGAAAAAGGAAAGGGCCTACATCTTCAGGAGCTGCCAATAGTACTGGTACAGGAAATACACTTGGCCCTTCTAATTCTCAACCGTCAACTCCATCTATTCATACTCCTGGTGATGGAGTTGCTATGGCGGGCAACTTGCAGAATGTTGCTGGTGTATCCAAGGGTTTGATGATTTATGGTACTGAAGGAGCAGGCGGTCTTGCATCTTCCACAAACCAGCTGGATGGCTTGGAACATTTTGGAGATGTTGGCTCCTTAGATGATAATGTGGAATCATTTCTCTCACAAGATGATGGTGATGGAAAGGACTTATTTGGGACGTTGAAACGGAACCCTGCCGAGCATGCTACAGATTCTTCAAAAGGCTTTTCCTTCAGTGAAGTTAGTTCTATACGCAAAAGCAATGGAAAAGTTGTTTGCTGTCATTTCTCTTCAGATGGGAAATTATTAGCCAGTGCTGGACATGACAAGAAGGTTGTTCTTTGGAACATGGAGACACTGAAAACGCAGAGCACGCCAGAGGAACACACTGTTATTATTACTGACGTTCGCTTCAGACCAAATTCAACTCAGCTGGCAACATCTTCGTTTGATACAACTGTGCGGCTTTGGGATGCTGCTGATGTAATTTTTTATTTTAATTCTCTTTTAACTGTTAGTGTTGGCCTTTCCTTGTCTTTCCTGTGTATACGGGATTATAACATGCTTTCGTTCTAA
Protein sequence

>MsG0180002483.01.T01

MAQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSDNAAAYLEVLPYSSFRFNAAAGYKILYFFCELKAQQLKAKEQQLQMQQLQLMRQAQMQRRDPNHPPIGTPPLNAITTEGMLGQSTATALAAKMYEDRMKNSNPMDTETSSQPLLDARMALLKSTNHPGQMVQGNSVSVTAALQQMQARTQQTPDIKSEVNMGNMQRSLPVDPSIYGQGGLQSKSGITNAGLNQGVGGLTLKGWPLTGIEQIRPGFGAQVQKPLLQSANQFQLLPQQQQQQLLAQVHAQGNIGNSQVYGDMDPQRLRGLARGGLNVKDSQPIANDGSIGSPMQSTSSKINMPQMQQSISQQQHDPLHSQQLVQNNRKRKGPTSSGAANSTGTGNTLGPSNSQPSTPSIHTPGDGVAMAGNLQNVAGVSKGLMIYGTEGAGGLASSTNQLDGLEHFGDVGSLDDNVESFLSQDDGDGKDLFGTLKRNPAEHATDSSKGFSFSEVSSIRKSNGKVVCCHFSSDGKLLASAGHDKKVVLWNMETLKTQSTPEEHTVIITDVRFRPNSTQLATSSFDTTVRLWDAADVIFYFNSLLTVSVGLSLSFLCIRDYNMLSF*

>MsG0180002483.01.T02

MAQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSDNAAAYLEVLPYSSFRFNAAAGYKILYFFCELKAQQLKAKEQQLQMQQLQLMRQAQMQRRDPNHPPIGTPPLNAITTEGMLGQSTATALAAKMYEDRMKNSNPMDTETSSQPLLDARMALLKSTNHPGQMVQGNSVSVTAALQQMQARTQQTPDIKSEVNMGNMQRSLPVDPSIYGQGGLQSKSGITNAGLNQGVGGLTLKGWPLTGIEQIRPGFGAQVQKPLLQSANQFQLLPQQQQQQLLAQVHAQGNIGNSQVYGDMDPQRLRGLARGGLNVKDSQPIANDGSIGSPMQSTSSKINMPQMQQSISQQQHDPLHSQQLVQNNRKRKGPTSSGAANSTGTGNTLGPSNSQPSTPSIHTPGDGVAMAGNLQNVAGVSKGLMIYGTEGAGGLASSTNQLDGLEHFGDVGSLDDNVESFLSQDDGDGKDLFGTLKRNPAEHATDSSKGFSFSEVSSIRKSNGKVVCCHFSSDGKLLASAGHDKKVVLWNMETLKTQSTPEEHTVIITDVRFRPNSTQLATSSFDTTVRLWDAADVIFYFNSLLTVSVGLSLSFLCIRDYNMLSF*