Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002931.01.T01 | XP_013442140.1 | 99.248 | 798 | 5 | 1 | 1 | 798 | 1 | 797 | 0 | 1642 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002931.01.T01 | Q9FL59 | 80.94 | 787 | 149 | 1 | 12 | 798 | 9 | 794 | 0 | 1375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002931.01.T01 | A0A072TRG9 | 99.248 | 798 | 5 | 1 | 1 | 798 | 1 | 797 | 0.0 | 1642 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180002931.01 | MsG0180002936.01 | PPI |
| MsG0180002931.01 | MsG0180002936.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002931.01.T01 | MTR_0291s0010 | 99.248 | 798 | 5 | 1 | 1 | 798 | 1 | 797 | 0.0 | 1642 |
| MsG0180002931.01.T01 | MTR_3g027150 | 71.252 | 807 | 223 | 4 | 1 | 798 | 16 | 822 | 0.0 | 1249 |
| MsG0180002931.01.T01 | MTR_4g023460 | 71.824 | 795 | 220 | 3 | 6 | 798 | 350 | 1142 | 0.0 | 1241 |
| MsG0180002931.01.T01 | MTR_7g092770 | 67.509 | 791 | 239 | 6 | 9 | 798 | 2 | 775 | 0.0 | 1152 |
| MsG0180002931.01.T01 | MTR_0305s0020 | 67.257 | 791 | 240 | 8 | 9 | 798 | 2 | 774 | 0.0 | 1122 |
| MsG0180002931.01.T01 | MTR_4g066150 | 65.355 | 788 | 251 | 6 | 11 | 798 | 5 | 770 | 0.0 | 1080 |
| MsG0180002931.01.T01 | MTR_5g010390 | 62.389 | 787 | 279 | 6 | 15 | 798 | 235 | 1007 | 0.0 | 1058 |
| MsG0180002931.01.T01 | MTR_4g033215 | 59.745 | 785 | 299 | 4 | 15 | 798 | 276 | 1044 | 0.0 | 991 |
| MsG0180002931.01.T01 | MTR_8g031270 | 57.034 | 789 | 316 | 8 | 15 | 798 | 233 | 1003 | 0.0 | 955 |
| MsG0180002931.01.T01 | MTR_7g076900 | 57.215 | 797 | 310 | 9 | 15 | 798 | 235 | 1013 | 0.0 | 939 |
| MsG0180002931.01.T01 | MTR_4g057675 | 50.816 | 797 | 362 | 10 | 9 | 798 | 10 | 783 | 0.0 | 778 |
| MsG0180002931.01.T01 | MTR_4g107850 | 50.914 | 766 | 329 | 15 | 50 | 798 | 303 | 1038 | 0.0 | 757 |
| MsG0180002931.01.T01 | MTR_6g027540 | 49.153 | 767 | 341 | 14 | 50 | 798 | 274 | 1009 | 0.0 | 743 |
| MsG0180002931.01.T01 | MTR_4g071870 | 48.808 | 797 | 344 | 12 | 9 | 798 | 10 | 749 | 0.0 | 739 |
| MsG0180002931.01.T01 | MTR_6g028050 | 47.513 | 764 | 367 | 12 | 48 | 798 | 284 | 1026 | 0.0 | 718 |
| MsG0180002931.01.T01 | MTR_1g015540 | 43.550 | 783 | 407 | 13 | 26 | 792 | 4 | 767 | 0.0 | 635 |
| MsG0180002931.01.T01 | MTR_5g096980 | 40.445 | 764 | 420 | 15 | 47 | 798 | 23 | 763 | 0.0 | 561 |
| MsG0180002931.01.T01 | MTR_4g023250 | 65.385 | 130 | 43 | 1 | 668 | 797 | 1 | 128 | 8.93e-53 | 179 |
| MsG0180002931.01.T01 | MTR_4g023230 | 46.721 | 122 | 50 | 1 | 585 | 706 | 49 | 155 | 1.89e-31 | 120 |
| MsG0180002931.01.T01 | MTR_4g023390 | 47.115 | 104 | 33 | 1 | 671 | 774 | 16 | 97 | 1.96e-26 | 104 |
| MsG0180002931.01.T01 | MTR_4g023240 | 73.333 | 60 | 16 | 0 | 519 | 578 | 10 | 69 | 2.91e-23 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002931.01.T01 | AT5G06850 | 80.940 | 787 | 149 | 1 | 12 | 798 | 9 | 794 | 0.0 | 1375 |
| MsG0180002931.01.T01 | AT5G48060 | 71.429 | 791 | 211 | 6 | 12 | 798 | 257 | 1036 | 0.0 | 1207 |
| MsG0180002931.01.T01 | AT3G57880 | 67.383 | 791 | 238 | 9 | 9 | 798 | 2 | 773 | 0.0 | 1129 |
| MsG0180002931.01.T01 | AT3G57880 | 67.383 | 791 | 238 | 9 | 9 | 798 | 2 | 773 | 0.0 | 1129 |
| MsG0180002931.01.T01 | AT3G57880 | 67.383 | 791 | 238 | 9 | 9 | 798 | 2 | 773 | 0.0 | 1129 |
| MsG0180002931.01.T01 | AT3G57880 | 67.383 | 791 | 238 | 9 | 9 | 798 | 2 | 773 | 0.0 | 1129 |
| MsG0180002931.01.T01 | AT5G12970 | 65.613 | 791 | 248 | 7 | 9 | 798 | 2 | 769 | 0.0 | 1103 |
| MsG0180002931.01.T01 | AT1G51570 | 65.025 | 792 | 258 | 8 | 9 | 798 | 2 | 776 | 0.0 | 1100 |
| MsG0180002931.01.T01 | AT4G11610 | 61.845 | 802 | 279 | 8 | 1 | 798 | 233 | 1011 | 0.0 | 1053 |
| MsG0180002931.01.T01 | AT4G11610 | 61.845 | 802 | 279 | 8 | 1 | 798 | 229 | 1007 | 0.0 | 1053 |
| MsG0180002931.01.T01 | AT4G11610 | 61.845 | 802 | 279 | 8 | 1 | 798 | 96 | 874 | 0.0 | 1052 |
| MsG0180002931.01.T01 | AT1G22610 | 58.198 | 799 | 319 | 5 | 1 | 798 | 245 | 1029 | 0.0 | 993 |
| MsG0180002931.01.T01 | AT4G00700 | 56.767 | 761 | 317 | 7 | 43 | 798 | 253 | 1006 | 0.0 | 909 |
| MsG0180002931.01.T01 | AT4G00700 | 56.767 | 761 | 317 | 7 | 43 | 798 | 253 | 1006 | 0.0 | 909 |
| MsG0180002931.01.T01 | AT1G04150 | 54.064 | 812 | 325 | 14 | 5 | 798 | 231 | 1012 | 0.0 | 877 |
| MsG0180002931.01.T01 | AT3G61300 | 53.141 | 796 | 327 | 16 | 10 | 798 | 216 | 972 | 0.0 | 872 |
| MsG0180002931.01.T01 | AT4G20080 | 53.887 | 759 | 329 | 9 | 44 | 798 | 33 | 774 | 0.0 | 858 |
| MsG0180002931.01.T01 | AT1G74720 | 50.127 | 786 | 351 | 13 | 36 | 798 | 314 | 1081 | 0.0 | 765 |
| MsG0180002931.01.T01 | AT3G03680 | 49.483 | 774 | 336 | 15 | 50 | 798 | 274 | 1017 | 0.0 | 752 |
| MsG0180002931.01.T01 | AT5G17980 | 47.507 | 762 | 363 | 14 | 48 | 798 | 314 | 1049 | 0.0 | 718 |
| MsG0180002931.01.T01 | AT3G61720 | 37.272 | 821 | 452 | 19 | 12 | 798 | 4 | 795 | 1.46e-165 | 499 |
| MsG0180002931.01.T01 | AT5G03435 | 37.657 | 794 | 427 | 24 | 12 | 793 | 4 | 741 | 4.83e-157 | 476 |
| MsG0180002931.01.T01 | AT5G03435 | 40.304 | 593 | 308 | 16 | 12 | 598 | 4 | 556 | 5.74e-129 | 396 |
| MsG0180002931.01.T01 | AT5G44760 | 44.068 | 413 | 172 | 12 | 15 | 421 | 5 | 364 | 1.86e-100 | 319 |
| MsG0180002931.01.T01 | AT5G44760 | 35.766 | 137 | 39 | 1 | 564 | 700 | 364 | 451 | 2.12e-17 | 86.7 |
| MsG0180002931.01.T01 | AT1G03370 | 31.707 | 123 | 80 | 3 | 59 | 180 | 3 | 122 | 4.39e-11 | 67.0 |
| MsG0180002931.01.T01 | AT1G03370 | 31.707 | 123 | 80 | 3 | 59 | 180 | 3 | 122 | 5.86e-11 | 67.0 |
Find 145 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCGAAACTTTGGTATTTA+AGG | 0.059181 | 1:+53320805 | MsG0180002931.01.T01:CDS |
| GCTCACATAATTTACCTTTA+TGG | 0.084008 | 1:+53321728 | MsG0180002931.01.T01:CDS |
| TCAGATTCAGCTTCAGTTAA+AGG | 0.151763 | 1:+53320744 | MsG0180002931.01.T01:CDS |
| ACATGTTTCTCATTGGAATA+TGG | 0.237452 | 1:+53322104 | MsG0180002931.01.T01:CDS |
| GTGTATTGTTCATTCCATTT+TGG | 0.239153 | 1:-53321452 | None:intergenic |
| AAGATTGTTATTTCTGTTGC+TGG | 0.245800 | 1:+53322433 | MsG0180002931.01.T01:CDS |
| TTACTTGTTCTAAAACCTTC+TGG | 0.249201 | 1:+53321650 | MsG0180002931.01.T01:CDS |
| TGGATTTGGTGGCAATTCTT+TGG | 0.274389 | 1:-53320355 | None:intergenic |
| TATCACATCTTGTGCCTTAG+AGG | 0.279796 | 1:-53322233 | None:intergenic |
| GCGAAAACTTGCTTCCATTC+GGG | 0.282351 | 1:-53320462 | None:intergenic |
| CACCTTAGAGTTTGTCTTGA+AGG | 0.286543 | 1:+53321203 | MsG0180002931.01.T01:CDS |
| ATTGTTGGTAGGATCAATTC+TGG | 0.294073 | 1:-53322073 | None:intergenic |
| TCCGAAACTTTGGTATTTAA+GGG | 0.315843 | 1:+53320806 | MsG0180002931.01.T01:CDS |
| CCTTGCACAGTCATAACTTT+TGG | 0.316380 | 1:+53321491 | MsG0180002931.01.T01:CDS |
| GGCTTCAAGCTTTGCTTAGT+TGG | 0.317783 | 1:+53322335 | MsG0180002931.01.T01:CDS |
| ACCCTTAAATACCAAAGTTT+CGG | 0.329185 | 1:-53320807 | None:intergenic |
| ACAGAAATAACAATCTTAAA+AGG | 0.330313 | 1:-53322427 | None:intergenic |
| CCACATTGGATTCGGCGTTT+TGG | 0.333074 | 1:-53320940 | None:intergenic |
| GGGTAATATCTATGAGTAAA+TGG | 0.335854 | 1:+53321972 | MsG0180002931.01.T01:CDS |
| AGCTTGTAATCATCTGTGTT+TGG | 0.339723 | 1:-53320189 | None:intergenic |
| ACGCTTCCTGTGACTGGATT+TGG | 0.340820 | 1:-53320369 | None:intergenic |
| GCTTATTGTGTAGCAAAATA+TGG | 0.350897 | 1:+53321386 | MsG0180002931.01.T01:CDS |
| GAAGAGCAGAACCACCTCTT+AGG | 0.360465 | 1:+53321852 | MsG0180002931.01.T01:CDS |
| AACTCTTCATCTAGTTCATC+TGG | 0.366933 | 1:-53322196 | None:intergenic |
| GGCTTAGGCATCCAAAGTTT+AGG | 0.369172 | 1:+53322464 | MsG0180002931.01.T01:CDS |
| TCGTTTATCAACTTTAGAAA+TGG | 0.370382 | 1:+53321601 | MsG0180002931.01.T01:CDS |
| GTTGGAGAACAAGGCGAGTC+CGG | 0.373824 | 1:+53321019 | MsG0180002931.01.T01:CDS |
| CCAACTTTCACTTCAACATA+AGG | 0.378608 | 1:-53320396 | None:intergenic |
| CGCGAAAACTTGCTTCCATT+CGG | 0.379563 | 1:-53320463 | None:intergenic |
| TTTCTCTACATGTTTCTCAT+TGG | 0.383690 | 1:+53322097 | MsG0180002931.01.T01:CDS |
| TGGTACAACGTTGAAAGATT+TGG | 0.387221 | 1:+53321125 | MsG0180002931.01.T01:CDS |
| TGCGGCGCCAAAGGACTATC+TGG | 0.389015 | 1:-53320612 | None:intergenic |
| CTATCTGGTGGAACTCTTGT+TGG | 0.399768 | 1:-53320597 | None:intergenic |
| CACCTTCAAGACAAACTCTA+AGG | 0.399784 | 1:-53321205 | None:intergenic |
| GTAGCTAGAGATGATTATAT+TGG | 0.404183 | 1:+53320546 | MsG0180002931.01.T01:CDS |
| CAACTTTGGAAGCAACCAAT+TGG | 0.407270 | 1:+53321287 | MsG0180002931.01.T01:CDS |
| GATAGGCTTAGGAGTGTTGC+TGG | 0.407272 | 1:+53322268 | MsG0180002931.01.T01:CDS |
| TAGCAAAATATGGTATGAAA+TGG | 0.410325 | 1:+53321396 | MsG0180002931.01.T01:CDS |
| GGAGGACAACGAGGCGGAAC+CGG | 0.416161 | 1:+53320252 | MsG0180002931.01.T01:CDS |
| TCTTCGTTCCACATTGGATT+CGG | 0.417173 | 1:-53320948 | None:intergenic |
| CCAATTGGGATTCTTGAAGT+TGG | 0.419056 | 1:+53321302 | MsG0180002931.01.T01:CDS |
| GGCAACTTGCTCCTAAACTT+TGG | 0.423193 | 1:-53322475 | None:intergenic |
| GTGAAGTTATGTTAGCGGTT+TGG | 0.426325 | 1:+53320679 | MsG0180002931.01.T01:CDS |
| ACCAAGACACCCTCCACATA+TGG | 0.428256 | 1:+53322141 | MsG0180002931.01.T01:CDS |
| TCTAATTGATTCACAGTGAA+TGG | 0.428751 | 1:-53321785 | None:intergenic |
| TGATAAGAATGAGGTATGAT+AGG | 0.433867 | 1:+53322251 | MsG0180002931.01.T01:CDS |
| TTGATGTGGATTCACATATA+TGG | 0.435933 | 1:+53321897 | MsG0180002931.01.T01:CDS |
| GGATCTACGCTTCCTGTGAC+TGG | 0.438103 | 1:-53320375 | None:intergenic |
| AAGAAATTGCTTGGCACAGA+AGG | 0.441455 | 1:-53322496 | None:intergenic |
| AGCAAAATATGGTATGAAAT+GGG | 0.446499 | 1:+53321397 | MsG0180002931.01.T01:CDS |
| GGCGTTCTCGAAGGTGATAA+AGG | 0.447020 | 1:+53321152 | MsG0180002931.01.T01:CDS |
| AACGTTGAAAGATTTGGTTT+TGG | 0.449052 | 1:+53321131 | MsG0180002931.01.T01:CDS |
| AGATTGTTATTTCTGTTGCT+GGG | 0.455606 | 1:+53322434 | MsG0180002931.01.T01:CDS |
| TTTATGTTAATCCGAAACTT+TGG | 0.456350 | 1:+53320796 | MsG0180002931.01.T01:CDS |
| TTGGAGAACAAGGCGAGTCC+GGG | 0.462296 | 1:+53321020 | MsG0180002931.01.T01:CDS |
| TCCATATGTGGAGGGTGTCT+TGG | 0.467356 | 1:-53322142 | None:intergenic |
| GAAGTAAAGGGTGTCCATAA+AGG | 0.467642 | 1:-53321742 | None:intergenic |
| GCCACAACTTCGTCTTTCCC+CGG | 0.471487 | 1:-53321038 | None:intergenic |
| TTGTACCACCGCGAATGCAC+CGG | 0.472389 | 1:-53321110 | None:intergenic |
| TTCTTCAAGAGGTTGCCATC+TGG | 0.472554 | 1:+53322514 | MsG0180002931.01.T01:CDS |
| GACAATTGTCATTTAGGTGG+TGG | 0.473245 | 1:+53321521 | MsG0180002931.01.T01:CDS |
| AACTTTGGAAGCAACCAATT+GGG | 0.474089 | 1:+53321288 | MsG0180002931.01.T01:CDS |
| GAATGAGGTATGATAGGCTT+AGG | 0.474201 | 1:+53322257 | MsG0180002931.01.T01:CDS |
| ATCATCGCCCGGTGCATTCG+CGG | 0.476775 | 1:+53321102 | MsG0180002931.01.T01:CDS |
| CCAACTTCAAGAATCCCAAT+TGG | 0.478146 | 1:-53321302 | None:intergenic |
| ACATCTTGTGCCTTAGAGGT+TGG | 0.479165 | 1:-53322229 | None:intergenic |
| GGACTTTCACCAATGAAAAC+AGG | 0.481943 | 1:+53321341 | MsG0180002931.01.T01:CDS |
| TTCCAAAGTTGTCTAGCAGT+TGG | 0.485379 | 1:-53321275 | None:intergenic |
| TCTTTCGCTGTAAAGCCAAC+CGG | 0.488325 | 1:-53320271 | None:intergenic |
| AGTTCCACCAGATAGTCCTT+TGG | 0.489398 | 1:+53320605 | MsG0180002931.01.T01:CDS |
| ATGAACTTAAATTCTCAAGT+AGG | 0.491390 | 1:+53321177 | MsG0180002931.01.T01:CDS |
| TGAACTAGTATTGTTGTCAC+TGG | 0.493829 | 1:-53322022 | None:intergenic |
| CGAAAACTTGCTTCCATTCG+GGG | 0.493876 | 1:-53320461 | None:intergenic |
| GAATCTGAATGCCATGCCTC+AGG | 0.494847 | 1:-53320729 | None:intergenic |
| CCTTATGTTGAAGTGAAAGT+TGG | 0.496099 | 1:+53320396 | MsG0180002931.01.T01:CDS |
| AACCTCTTGAAGAAATTGCT+TGG | 0.498226 | 1:-53322505 | None:intergenic |
| GACCAACTGCTAGACAACTT+TGG | 0.501805 | 1:+53321273 | MsG0180002931.01.T01:CDS |
| TCAACAACTTCTTTCCTAAG+AGG | 0.501997 | 1:-53321866 | None:intergenic |
| CTGCTACAATGTTCATAGCT+TGG | 0.502811 | 1:-53321820 | None:intergenic |
| TGCCAAGCAATTTCTTCAAG+AGG | 0.504743 | 1:+53322503 | MsG0180002931.01.T01:CDS |
| CTCGAATTTGTTCAACGGCA+AGG | 0.512907 | 1:-53321069 | None:intergenic |
| AAGAGGTGAAGTTATGTTAG+CGG | 0.521890 | 1:+53320674 | MsG0180002931.01.T01:CDS |
| TGTACCACCGCGAATGCACC+GGG | 0.530409 | 1:-53321109 | None:intergenic |
| AGTTATGTTAGCGGTTTGGA+TGG | 0.531133 | 1:+53320683 | MsG0180002931.01.T01:CDS |
| AGTTTACAATATTAGATCAA+AGG | 0.534131 | 1:+53320773 | MsG0180002931.01.T01:CDS |
| AAAGACACAAAGCCAGAGCT+AGG | 0.537262 | 1:+53320213 | MsG0180002931.01.T01:CDS |
| CGTTGAACAAATTCGAGACT+CGG | 0.538730 | 1:+53321075 | MsG0180002931.01.T01:CDS |
| CTATACCATTGCGGCGCCAA+AGG | 0.540068 | 1:-53320621 | None:intergenic |
| CGTGCTGACGTTGGAGAACA+AGG | 0.541103 | 1:+53321010 | MsG0180002931.01.T01:CDS |
| AGAAAACCTCGTGCTGACGT+TGG | 0.541212 | 1:+53321001 | MsG0180002931.01.T01:CDS |
| TCAGCTTCAGTTAAAGGTGA+AGG | 0.543385 | 1:+53320750 | MsG0180002931.01.T01:CDS |
| TGTATCACTTATATACATTG+TGG | 0.546946 | 1:-53321249 | None:intergenic |
| GCGCCGCAATGGTATAGACT+AGG | 0.547237 | 1:+53320627 | MsG0180002931.01.T01:CDS |
| CGCCGCAATGGTATAGACTA+GGG | 0.547437 | 1:+53320628 | MsG0180002931.01.T01:CDS |
| GTTATGTTAGCGGTTTGGAT+GGG | 0.554019 | 1:+53320684 | MsG0180002931.01.T01:CDS |
| ACAAGATCTTCGTTCCACAT+TGG | 0.557915 | 1:-53320954 | None:intergenic |
| AGAAGAAAACAAACCCCGAA+TGG | 0.558086 | 1:+53320448 | MsG0180002931.01.T01:CDS |
| CTTCCTGTGACTGGATTTGG+TGG | 0.560390 | 1:-53320366 | None:intergenic |
| ATAGTCCTTTGGCGCCGCAA+TGG | 0.565983 | 1:+53320616 | MsG0180002931.01.T01:CDS |
| TTTGACAATTGTCATTTAGG+TGG | 0.567553 | 1:+53321518 | MsG0180002931.01.T01:CDS |
| GACTCGGATGGATCATCGCC+CGG | 0.570812 | 1:+53321091 | MsG0180002931.01.T01:CDS |
| ACAACTTCTTTCCTAAGAGG+TGG | 0.571006 | 1:-53321863 | None:intergenic |
| CCAAAAGTTATGACTGTGCA+AGG | 0.572940 | 1:-53321491 | None:intergenic |
| TTGCCACCAAATCCAGTCAC+AGG | 0.577826 | 1:+53320363 | MsG0180002931.01.T01:CDS |
| CACAAGATGTGATAAGAATG+AGG | 0.578190 | 1:+53322242 | MsG0180002931.01.T01:CDS |
| ATATCTATGAGTAAATGGCT+TGG | 0.584041 | 1:+53321977 | MsG0180002931.01.T01:CDS |
| GTGAAAGTTGGCAACTACAA+AGG | 0.587577 | 1:+53320408 | MsG0180002931.01.T01:CDS |
| GAACAAATTCGAGACTCGGA+TGG | 0.591471 | 1:+53321079 | MsG0180002931.01.T01:CDS |
| CTTCTGTCTTGTAACTGCTG+TGG | 0.594601 | 1:+53322390 | MsG0180002931.01.T01:CDS |
| CTTTGACAACGCGAACATAG+AGG | 0.595677 | 1:-53320332 | None:intergenic |
| AAAGGTGAAACAAGAACAAG+AGG | 0.601357 | 1:+53320657 | MsG0180002931.01.T01:CDS |
| ATGAAGCGTTTCCTGAGGCA+TGG | 0.601952 | 1:+53320718 | MsG0180002931.01.T01:CDS |
| TGTTGAATACATGCTTGATG+TGG | 0.606283 | 1:+53321883 | MsG0180002931.01.T01:CDS |
| TATAGACTAGGGAATTTGAA+AGG | 0.609327 | 1:+53320639 | MsG0180002931.01.T01:CDS |
| CCAAAACGCCGAATCCAATG+TGG | 0.614361 | 1:+53320940 | MsG0180002931.01.T01:CDS |
| AAAGGAGAAGATACAATCAT+CGG | 0.615131 | 1:+53320491 | MsG0180002931.01.T01:CDS |
| TGTTCTCCAACGTCAGCACG+AGG | 0.616133 | 1:-53321007 | None:intergenic |
| TCACCAATGAAAACAGGCAA+TGG | 0.618152 | 1:+53321347 | MsG0180002931.01.T01:CDS |
| CGAGTCTCGAATTTGTTCAA+CGG | 0.618223 | 1:-53321074 | None:intergenic |
| GGCTTGGTGAGGTACAAAAG+TGG | 0.626019 | 1:+53321993 | MsG0180002931.01.T01:CDS |
| GACAACGAGGCGGAACCGGT+TGG | 0.626600 | 1:+53320256 | MsG0180002931.01.T01:CDS |
| AGCTGATGAAGCGTTTCCTG+AGG | 0.631444 | 1:+53320713 | MsG0180002931.01.T01:CDS |
| AACATTGTAGCAGTGAGGCT+AGG | 0.632784 | 1:+53321830 | MsG0180002931.01.T01:CDS |
| GGTGGAAATTCTCAACAAAG+TGG | 0.639010 | 1:+53321539 | MsG0180002931.01.T01:CDS |
| TGGAGAACAAGGCGAGTCCG+GGG | 0.639479 | 1:+53321021 | MsG0180002931.01.T01:CDS |
| AACGAGCACTTACGACCTTG+TGG | 0.643546 | 1:+53320296 | MsG0180002931.01.T01:CDS |
| AGCATGCTATCAGCACCAGA+TGG | 0.646226 | 1:-53322529 | None:intergenic |
| TCCGGGGAAAGACGAAGTTG+TGG | 0.646466 | 1:+53321037 | MsG0180002931.01.T01:CDS |
| ATATTGCAACACAAGGTGAG+AGG | 0.647800 | 1:+53322314 | MsG0180002931.01.T01:CDS |
| ATCGCCCGGTGCATTCGCGG+TGG | 0.657134 | 1:+53321105 | MsG0180002931.01.T01:CDS |
| TATGAGTAAATGGCTTGGTG+AGG | 0.658552 | 1:+53321982 | MsG0180002931.01.T01:CDS |
| GGAAGAATACAAACTGTGGT+TGG | 0.659627 | 1:+53322289 | MsG0180002931.01.T01:CDS |
| GTTGGAATATTGAGTGCACA+AGG | 0.667797 | 1:+53321320 | MsG0180002931.01.T01:CDS |
| TTCCCTAGTCTATACCATTG+CGG | 0.674872 | 1:-53320630 | None:intergenic |
| AATGGAATGAACAATACACA+TGG | 0.675943 | 1:+53321456 | MsG0180002931.01.T01:CDS |
| CCGCCTCGTTGTCCTCCATG+TGG | 0.680531 | 1:-53320246 | None:intergenic |
| GGCGCCAAAGGACTATCTGG+TGG | 0.683541 | 1:-53320609 | None:intergenic |
| ATGGAATGAACAATACACAT+GGG | 0.694697 | 1:+53321457 | MsG0180002931.01.T01:CDS |
| TGGCCACATGGAGGACAACG+AGG | 0.696057 | 1:+53320243 | MsG0180002931.01.T01:CDS |
| ATTTGTACGAGACAAAGAGA+TGG | 0.696951 | 1:+53320524 | MsG0180002931.01.T01:CDS |
| CCACATGGAGGACAACGAGG+CGG | 0.699639 | 1:+53320246 | MsG0180002931.01.T01:CDS |
| CTATGAACATTGTAGCAGTG+AGG | 0.715518 | 1:+53321825 | MsG0180002931.01.T01:CDS |
| GGTAGAACATCTGTTCCACA+AGG | 0.716804 | 1:-53320311 | None:intergenic |
| GTTGGTGATATTGCAACACA+AGG | 0.736881 | 1:+53322307 | MsG0180002931.01.T01:CDS |
| TGCTGGAAGAATACAAACTG+TGG | 0.747236 | 1:+53322285 | MsG0180002931.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTAATGATGCAAAAAT+TGG | + | Chr1:53321566-53321585 | MsG0180002931.01.T01:CDS | 20.0% |
| !! | ACAGAAATAACAATCTTAAA+AGG | - | Chr1:53322430-53322449 | None:intergenic | 20.0% |
| !! | AGTTTACAATATTAGATCAA+AGG | + | Chr1:53320773-53320792 | MsG0180002931.01.T01:CDS | 20.0% |
| !! | ATATGGATACAAAAATTTCA+TGG | + | Chr1:53322158-53322177 | MsG0180002931.01.T01:CDS | 20.0% |
| !! | TATGGATACAAAAATTTCAT+GGG | + | Chr1:53322159-53322178 | MsG0180002931.01.T01:CDS | 20.0% |
| !!! | AATTTTTGCATCATTAGTTT+TGG | - | Chr1:53321567-53321586 | None:intergenic | 20.0% |
| ! | AACATGTAGAGAAAAATTGT+TGG | - | Chr1:53322091-53322110 | None:intergenic | 25.0% |
| ! | AGCAAAATATGGTATGAAAT+GGG | + | Chr1:53321397-53321416 | MsG0180002931.01.T01:CDS | 25.0% |
| ! | ATGAACTTAAATTCTCAAGT+AGG | + | Chr1:53321177-53321196 | MsG0180002931.01.T01:CDS | 25.0% |
| ! | TAGCAAAATATGGTATGAAA+TGG | + | Chr1:53321396-53321415 | MsG0180002931.01.T01:CDS | 25.0% |
| ! | TGTATCACTTATATACATTG+TGG | - | Chr1:53321252-53321271 | None:intergenic | 25.0% |
| ! | TTTATGTTAATCCGAAACTT+TGG | + | Chr1:53320796-53320815 | MsG0180002931.01.T01:CDS | 25.0% |
| !! | GAAATTTTTGTATCCATATG+TGG | - | Chr1:53322157-53322176 | None:intergenic | 25.0% |
| !! | TCATTGGAATATGGAATTTT+AGG | + | Chr1:53322113-53322132 | MsG0180002931.01.T01:CDS | 25.0% |
| !! | TCGTTTATCAACTTTAGAAA+TGG | + | Chr1:53321601-53321620 | MsG0180002931.01.T01:CDS | 25.0% |
| !!! | AATGCATTTTTGGAAGTAAA+GGG | - | Chr1:53321757-53321776 | None:intergenic | 25.0% |
| !!! | AATTGTATCACTTTTTTCAG+GGG | + | Chr1:53321952-53321971 | MsG0180002931.01.T01:CDS | 25.0% |
| !!! | AGAATTGTATCACTTTTTTC+AGG | + | Chr1:53321950-53321969 | MsG0180002931.01.T01:CDS | 25.0% |
| !!! | GAATTGTATCACTTTTTTCA+GGG | + | Chr1:53321951-53321970 | MsG0180002931.01.T01:CDS | 25.0% |
| !!! | GTTTTTGACAATTGTCATTT+AGG | + | Chr1:53321515-53321534 | MsG0180002931.01.T01:CDS | 25.0% |
| !!! | TAATGCATTTTTGGAAGTAA+AGG | - | Chr1:53321758-53321777 | None:intergenic | 25.0% |
| AAAGGAGAAGATACAATCAT+CGG | + | Chr1:53320491-53320510 | MsG0180002931.01.T01:CDS | 30.0% | |
| AATGGAATGAACAATACACA+TGG | + | Chr1:53321456-53321475 | MsG0180002931.01.T01:CDS | 30.0% | |
| ACAAACAAAAATGTTGCTCT+TGG | - | Chr1:53322367-53322386 | None:intergenic | 30.0% | |
| ACATGTTTCTCATTGGAATA+TGG | + | Chr1:53322104-53322123 | MsG0180002931.01.T01:CDS | 30.0% | |
| ACCCTTAAATACCAAAGTTT+CGG | - | Chr1:53320810-53320829 | None:intergenic | 30.0% | |
| ACCTTCTGGATTGAAAAAAA+TGG | + | Chr1:53321664-53321683 | MsG0180002931.01.T01:CDS | 30.0% | |
| ATATCTATGAGTAAATGGCT+TGG | + | Chr1:53321977-53321996 | MsG0180002931.01.T01:CDS | 30.0% | |
| ATCCGAAACTTTGGTATTTA+AGG | + | Chr1:53320805-53320824 | MsG0180002931.01.T01:CDS | 30.0% | |
| ATGGAATGAACAATACACAT+GGG | + | Chr1:53321457-53321476 | MsG0180002931.01.T01:CDS | 30.0% | |
| CCTTCTGGATTGAAAAAAAT+GGG | + | Chr1:53321665-53321684 | MsG0180002931.01.T01:CDS | 30.0% | |
| GCTCACATAATTTACCTTTA+TGG | + | Chr1:53321728-53321747 | MsG0180002931.01.T01:CDS | 30.0% | |
| GCTTATTGTGTAGCAAAATA+TGG | + | Chr1:53321386-53321405 | MsG0180002931.01.T01:CDS | 30.0% | |
| GGGTAATATCTATGAGTAAA+TGG | + | Chr1:53321972-53321991 | MsG0180002931.01.T01:CDS | 30.0% | |
| GTAGCTAGAGATGATTATAT+TGG | + | Chr1:53320546-53320565 | MsG0180002931.01.T01:CDS | 30.0% | |
| TATAGACTAGGGAATTTGAA+AGG | + | Chr1:53320639-53320658 | MsG0180002931.01.T01:CDS | 30.0% | |
| TCCGAAACTTTGGTATTTAA+GGG | + | Chr1:53320806-53320825 | MsG0180002931.01.T01:CDS | 30.0% | |
| TGATAAGAATGAGGTATGAT+AGG | + | Chr1:53322251-53322270 | MsG0180002931.01.T01:CDS | 30.0% | |
| TGTAGAGAAAAATTGTTGGT+AGG | - | Chr1:53322087-53322106 | None:intergenic | 30.0% | |
| TTGATGTGGATTCACATATA+TGG | + | Chr1:53321897-53321916 | MsG0180002931.01.T01:CDS | 30.0% | |
| TTTCTCTACATGTTTCTCAT+TGG | + | Chr1:53322097-53322116 | MsG0180002931.01.T01:CDS | 30.0% | |
| ! | ATTTTTGTATCCATATGTGG+AGG | - | Chr1:53322154-53322173 | None:intergenic | 30.0% |
| ! | GTGTATTGTTCATTCCATTT+TGG | - | Chr1:53321455-53321474 | None:intergenic | 30.0% |
| ! | GTTTTTGTAAAAGCTCAAGT+TGG | + | Chr1:53320885-53320904 | MsG0180002931.01.T01:CDS | 30.0% |
| ! | TCTAATTGATTCACAGTGAA+TGG | - | Chr1:53321788-53321807 | None:intergenic | 30.0% |
| ! | TGAGCTTTTACAAAAACTTG+TGG | - | Chr1:53320882-53320901 | None:intergenic | 30.0% |
| ! | TTTGACAATTGTCATTTAGG+TGG | + | Chr1:53321518-53321537 | MsG0180002931.01.T01:CDS | 30.0% |
| ! | TTTTTGTATCCATATGTGGA+GGG | - | Chr1:53322153-53322172 | None:intergenic | 30.0% |
| !! | AACGTTGAAAGATTTGGTTT+TGG | + | Chr1:53321131-53321150 | MsG0180002931.01.T01:CDS | 30.0% |
| !! | AAGATTGTTATTTCTGTTGC+TGG | + | Chr1:53322433-53322452 | MsG0180002931.01.T01:CDS | 30.0% |
| !! | AGATTGTTATTTCTGTTGCT+GGG | + | Chr1:53322434-53322453 | MsG0180002931.01.T01:CDS | 30.0% |
| !! | CTGAGAGTTTTAATCCAAAA+TGG | + | Chr1:53321438-53321457 | MsG0180002931.01.T01:CDS | 30.0% |
| !! | TTACTTGTTCTAAAACCTTC+TGG | + | Chr1:53321650-53321669 | MsG0180002931.01.T01:CDS | 30.0% |
| !!! | GAAGGTTTTAGAACAAGTAA+TGG | - | Chr1:53321650-53321669 | None:intergenic | 30.0% |
| AAAGGTGAAACAAGAACAAG+AGG | + | Chr1:53320657-53320676 | MsG0180002931.01.T01:CDS | 35.0% | |
| AACCTCTTGAAGAAATTGCT+TGG | - | Chr1:53322508-53322527 | None:intergenic | 35.0% | |
| AAGAGGTGAAGTTATGTTAG+CGG | + | Chr1:53320674-53320693 | MsG0180002931.01.T01:CDS | 35.0% | |
| AGCTTGTAATCATCTGTGTT+TGG | - | Chr1:53320192-53320211 | None:intergenic | 35.0% | |
| ATTTGTACGAGACAAAGAGA+TGG | + | Chr1:53320524-53320543 | MsG0180002931.01.T01:CDS | 35.0% | |
| CACAAGATGTGATAAGAATG+AGG | + | Chr1:53322242-53322261 | MsG0180002931.01.T01:CDS | 35.0% | |
| CCAACTTTCACTTCAACATA+AGG | - | Chr1:53320399-53320418 | None:intergenic | 35.0% | |
| CCTTATGTTGAAGTGAAAGT+TGG | + | Chr1:53320396-53320415 | MsG0180002931.01.T01:CDS | 35.0% | |
| TCAACAACTTCTTTCCTAAG+AGG | - | Chr1:53321869-53321888 | None:intergenic | 35.0% | |
| TCAGATTCAGCTTCAGTTAA+AGG | + | Chr1:53320744-53320763 | MsG0180002931.01.T01:CDS | 35.0% | |
| TGAACTAGTATTGTTGTCAC+TGG | - | Chr1:53322025-53322044 | None:intergenic | 35.0% | |
| TGGTACAACGTTGAAAGATT+TGG | + | Chr1:53321125-53321144 | MsG0180002931.01.T01:CDS | 35.0% | |
| TGTTGAATACATGCTTGATG+TGG | + | Chr1:53321883-53321902 | MsG0180002931.01.T01:CDS | 35.0% | |
| TTACAAAAACTTGTGGTGGT+TGG | - | Chr1:53320875-53320894 | None:intergenic | 35.0% | |
| ! | AACTCTTCATCTAGTTCATC+TGG | - | Chr1:53322199-53322218 | None:intergenic | 35.0% |
| ! | AACTTTGGAAGCAACCAATT+GGG | + | Chr1:53321288-53321307 | MsG0180002931.01.T01:CDS | 35.0% |
| ! | ATTGTTGGTAGGATCAATTC+TGG | - | Chr1:53322076-53322095 | None:intergenic | 35.0% |
| ! | GCTTTTACAAAAACTTGTGG+TGG | - | Chr1:53320879-53320898 | None:intergenic | 35.0% |
| ! | GGATGCAAGTAATGCATTTT+TGG | - | Chr1:53321767-53321786 | None:intergenic | 35.0% |
| ! | TGATACTTTTCCAACCTCTA+AGG | + | Chr1:53322219-53322238 | MsG0180002931.01.T01:CDS | 35.0% |
| ! | TTACCATTGCCTGTTTTCAT+TGG | - | Chr1:53321353-53321372 | None:intergenic | 35.0% |
| !!! | CCCATTTTTTTCAATCCAGA+AGG | - | Chr1:53321668-53321687 | None:intergenic | 35.0% |
| AAGAAATTGCTTGGCACAGA+AGG | - | Chr1:53322499-53322518 | None:intergenic | 40.0% | |
| ACAACTTCTTTCCTAAGAGG+TGG | - | Chr1:53321866-53321885 | None:intergenic | 40.0% | |
| ACAAGATCTTCGTTCCACAT+TGG | - | Chr1:53320957-53320976 | None:intergenic | 40.0% | |
| AGAAGAAAACAAACCCCGAA+TGG | + | Chr1:53320448-53320467 | MsG0180002931.01.T01:CDS | 40.0% | |
| ATATTGCAACACAAGGTGAG+AGG | + | Chr1:53322314-53322333 | MsG0180002931.01.T01:CDS | 40.0% | |
| CACCTTAGAGTTTGTCTTGA+AGG | + | Chr1:53321203-53321222 | MsG0180002931.01.T01:CDS | 40.0% | |
| CACCTTCAAGACAAACTCTA+AGG | - | Chr1:53321208-53321227 | None:intergenic | 40.0% | |
| CCAAAAGTTATGACTGTGCA+AGG | - | Chr1:53321494-53321513 | None:intergenic | 40.0% | |
| CCAACTTCAAGAATCCCAAT+TGG | - | Chr1:53321305-53321324 | None:intergenic | 40.0% | |
| CCAATTGGGATTCTTGAAGT+TGG | + | Chr1:53321302-53321321 | MsG0180002931.01.T01:CDS | 40.0% | |
| CGTTGAACAAATTCGAGACT+CGG | + | Chr1:53321075-53321094 | MsG0180002931.01.T01:CDS | 40.0% | |
| CTATGAACATTGTAGCAGTG+AGG | + | Chr1:53321825-53321844 | MsG0180002931.01.T01:CDS | 40.0% | |
| CTGCTACAATGTTCATAGCT+TGG | - | Chr1:53321823-53321842 | None:intergenic | 40.0% | |
| GAATGAGGTATGATAGGCTT+AGG | + | Chr1:53322257-53322276 | MsG0180002931.01.T01:CDS | 40.0% | |
| GGAAGAATACAAACTGTGGT+TGG | + | Chr1:53322289-53322308 | MsG0180002931.01.T01:CDS | 40.0% | |
| GGACTTTCACCAATGAAAAC+AGG | + | Chr1:53321341-53321360 | MsG0180002931.01.T01:CDS | 40.0% | |
| GGTGGAAATTCTCAACAAAG+TGG | + | Chr1:53321539-53321558 | MsG0180002931.01.T01:CDS | 40.0% | |
| GTGAAAGTTGGCAACTACAA+AGG | + | Chr1:53320408-53320427 | MsG0180002931.01.T01:CDS | 40.0% | |
| GTGAAGTTATGTTAGCGGTT+TGG | + | Chr1:53320679-53320698 | MsG0180002931.01.T01:CDS | 40.0% | |
| GTTGGAATATTGAGTGCACA+AGG | + | Chr1:53321320-53321339 | MsG0180002931.01.T01:CDS | 40.0% | |
| TATCACATCTTGTGCCTTAG+AGG | - | Chr1:53322236-53322255 | None:intergenic | 40.0% | |
| TCACCAATGAAAACAGGCAA+TGG | + | Chr1:53321347-53321366 | MsG0180002931.01.T01:CDS | 40.0% | |
| TCAGCTTCAGTTAAAGGTGA+AGG | + | Chr1:53320750-53320769 | MsG0180002931.01.T01:CDS | 40.0% | |
| TCTTCGTTCCACATTGGATT+CGG | - | Chr1:53320951-53320970 | None:intergenic | 40.0% | |
| TGCCAAGCAATTTCTTCAAG+AGG | + | Chr1:53322503-53322522 | MsG0180002931.01.T01:CDS | 40.0% | |
| TGCTGGAAGAATACAAACTG+TGG | + | Chr1:53322285-53322304 | MsG0180002931.01.T01:CDS | 40.0% | |
| TTCCAAAGTTGTCTAGCAGT+TGG | - | Chr1:53321278-53321297 | None:intergenic | 40.0% | |
| TTCCCTAGTCTATACCATTG+CGG | - | Chr1:53320633-53320652 | None:intergenic | 40.0% | |
| ! | AGTTATGTTAGCGGTTTGGA+TGG | + | Chr1:53320683-53320702 | MsG0180002931.01.T01:CDS | 40.0% |
| ! | CAACTTTGGAAGCAACCAAT+TGG | + | Chr1:53321287-53321306 | MsG0180002931.01.T01:CDS | 40.0% |
| ! | CCTTGCACAGTCATAACTTT+TGG | + | Chr1:53321491-53321510 | MsG0180002931.01.T01:CDS | 40.0% |
| ! | CGAGTCTCGAATTTGTTCAA+CGG | - | Chr1:53321077-53321096 | None:intergenic | 40.0% |
| ! | GACAATTGTCATTTAGGTGG+TGG | + | Chr1:53321521-53321540 | MsG0180002931.01.T01:CDS | 40.0% |
| ! | GTTATGTTAGCGGTTTGGAT+GGG | + | Chr1:53320684-53320703 | MsG0180002931.01.T01:CDS | 40.0% |
| ! | TTTCTGTTGCTGGGATTTTC+TGG | + | Chr1:53322443-53322462 | MsG0180002931.01.T01:CDS | 40.0% |
| !! | GAAGTAAAGGGTGTCCATAA+AGG | - | Chr1:53321745-53321764 | None:intergenic | 40.0% |
| !! | GTTGGTGATATTGCAACACA+AGG | + | Chr1:53322307-53322326 | MsG0180002931.01.T01:CDS | 40.0% |
| !! | TATGAGTAAATGGCTTGGTG+AGG | + | Chr1:53321982-53322001 | MsG0180002931.01.T01:CDS | 40.0% |
| !! | TGGATTTGGTGGCAATTCTT+TGG | - | Chr1:53320358-53320377 | None:intergenic | 40.0% |
| AAAGACACAAAGCCAGAGCT+AGG | + | Chr1:53320213-53320232 | MsG0180002931.01.T01:CDS | 45.0% | |
| AACATTGTAGCAGTGAGGCT+AGG | + | Chr1:53321830-53321849 | MsG0180002931.01.T01:CDS | 45.0% | |
| ACATCTTGTGCCTTAGAGGT+TGG | - | Chr1:53322232-53322251 | None:intergenic | 45.0% | |
| AGCCAGAGCTAGGAGAAAAA+TGG | + | Chr1:53320223-53320242 | MsG0180002931.01.T01:CDS | 45.0% | |
| AGTTCCACCAGATAGTCCTT+TGG | + | Chr1:53320605-53320624 | MsG0180002931.01.T01:CDS | 45.0% | |
| CTAGGAGAAAAATGGCCACA+TGG | + | Chr1:53320231-53320250 | MsG0180002931.01.T01:CDS | 45.0% | |
| CTATCTGGTGGAACTCTTGT+TGG | - | Chr1:53320600-53320619 | None:intergenic | 45.0% | |
| CTTCTGTCTTGTAACTGCTG+TGG | + | Chr1:53322390-53322409 | MsG0180002931.01.T01:CDS | 45.0% | |
| CTTTGACAACGCGAACATAG+AGG | - | Chr1:53320335-53320354 | None:intergenic | 45.0% | |
| GAACAAATTCGAGACTCGGA+TGG | + | Chr1:53321079-53321098 | MsG0180002931.01.T01:CDS | 45.0% | |
| GACCAACTGCTAGACAACTT+TGG | + | Chr1:53321273-53321292 | MsG0180002931.01.T01:CDS | 45.0% | |
| GGCTTAGGCATCCAAAGTTT+AGG | + | Chr1:53322464-53322483 | MsG0180002931.01.T01:CDS | 45.0% | |
| GGCTTCAAGCTTTGCTTAGT+TGG | + | Chr1:53322335-53322354 | MsG0180002931.01.T01:CDS | 45.0% | |
| GGTAGAACATCTGTTCCACA+AGG | - | Chr1:53320314-53320333 | None:intergenic | 45.0% | |
| TCTTTCGCTGTAAAGCCAAC+CGG | - | Chr1:53320274-53320293 | None:intergenic | 45.0% | |
| TTCTTCAAGAGGTTGCCATC+TGG | + | Chr1:53322514-53322533 | MsG0180002931.01.T01:CDS | 45.0% | |
| ! | AGCACGAGGTTTTCTTCGAA+CGG | - | Chr1:53320996-53321015 | None:intergenic | 45.0% |
| ! | CGAAAACTTGCTTCCATTCG+GGG | - | Chr1:53320464-53320483 | None:intergenic | 45.0% |
| ! | CGCGAAAACTTGCTTCCATT+CGG | - | Chr1:53320466-53320485 | None:intergenic | 45.0% |
| ! | CTCGAATTTGTTCAACGGCA+AGG | - | Chr1:53321072-53321091 | None:intergenic | 45.0% |
| ! | GCAAGTTTTCGCGTTCTCAA+AGG | + | Chr1:53320473-53320492 | MsG0180002931.01.T01:CDS | 45.0% |
| ! | GCGAAAACTTGCTTCCATTC+GGG | - | Chr1:53320465-53320484 | None:intergenic | 45.0% |
| ! | GGCAACTTGCTCCTAAACTT+TGG | - | Chr1:53322478-53322497 | None:intergenic | 45.0% |
| !! | ATTGGATTCGGCGTTTTGGT+CGG | - | Chr1:53320939-53320958 | None:intergenic | 45.0% |
| !!! | GGTGGTTGGCTTTTATCATG+TGG | - | Chr1:53320861-53320880 | None:intergenic | 45.0% |
| !!! | TTGCTGGGATTTTCTGGCTT+AGG | + | Chr1:53322449-53322468 | MsG0180002931.01.T01:CDS | 45.0% |
| !!! | TTTGGTTTTGGCGTTCTCGA+AGG | + | Chr1:53321143-53321162 | MsG0180002931.01.T01:CDS | 45.0% |
| AACGAGCACTTACGACCTTG+TGG | + | Chr1:53320296-53320315 | MsG0180002931.01.T01:CDS | 50.0% | |
| ACCAAGACACCCTCCACATA+TGG | + | Chr1:53322141-53322160 | MsG0180002931.01.T01:CDS | 50.0% | |
| ACGCTTCCTGTGACTGGATT+TGG | - | Chr1:53320372-53320391 | None:intergenic | 50.0% | |
| AGCATGCTATCAGCACCAGA+TGG | - | Chr1:53322532-53322551 | None:intergenic | 50.0% | |
| CCAAAACGCCGAATCCAATG+TGG | + | Chr1:53320940-53320959 | MsG0180002931.01.T01:CDS | 50.0% | |
| CGCCGCAATGGTATAGACTA+GGG | + | Chr1:53320628-53320647 | MsG0180002931.01.T01:CDS | 50.0% | |
| CTTCCTGTGACTGGATTTGG+TGG | - | Chr1:53320369-53320388 | None:intergenic | 50.0% | |
| GAAGAGCAGAACCACCTCTT+AGG | + | Chr1:53321852-53321871 | MsG0180002931.01.T01:CDS | 50.0% | |
| GAATCTGAATGCCATGCCTC+AGG | - | Chr1:53320732-53320751 | None:intergenic | 50.0% | |
| GGAGAAAAATGGCCACATGG+AGG | + | Chr1:53320234-53320253 | MsG0180002931.01.T01:CDS | 50.0% | |
| GGCGTTCTCGAAGGTGATAA+AGG | + | Chr1:53321152-53321171 | MsG0180002931.01.T01:CDS | 50.0% | |
| TTGCCACCAAATCCAGTCAC+AGG | + | Chr1:53320363-53320382 | MsG0180002931.01.T01:CDS | 50.0% | |
| ! | AGAAAACCTCGTGCTGACGT+TGG | + | Chr1:53321001-53321020 | MsG0180002931.01.T01:CDS | 50.0% |
| ! | AGCTGATGAAGCGTTTCCTG+AGG | + | Chr1:53320713-53320732 | MsG0180002931.01.T01:CDS | 50.0% |
| ! | ATGAAGCGTTTCCTGAGGCA+TGG | + | Chr1:53320718-53320737 | MsG0180002931.01.T01:CDS | 50.0% |
| ! | CCACATTGGATTCGGCGTTT+TGG | - | Chr1:53320943-53320962 | None:intergenic | 50.0% |
| !! | GATAGGCTTAGGAGTGTTGC+TGG | + | Chr1:53322268-53322287 | MsG0180002931.01.T01:CDS | 50.0% |
| !! | GGCTTGGTGAGGTACAAAAG+TGG | + | Chr1:53321993-53322012 | MsG0180002931.01.T01:CDS | 50.0% |
| !! | TCCATATGTGGAGGGTGTCT+TGG | - | Chr1:53322145-53322164 | None:intergenic | 50.0% |
| !!! | GGCCATTTTTCTCCTAGCTC+TGG | - | Chr1:53320228-53320247 | None:intergenic | 50.0% |
| !!! | GTGTTTGGCTTTTGAGCTGC+AGG | - | Chr1:53320177-53320196 | None:intergenic | 50.0% |
| ATAGTCCTTTGGCGCCGCAA+TGG | + | Chr1:53320616-53320635 | MsG0180002931.01.T01:CDS | 55.0% | |
| CTATACCATTGCGGCGCCAA+AGG | - | Chr1:53320624-53320643 | None:intergenic | 55.0% | |
| GCCACAACTTCGTCTTTCCC+CGG | - | Chr1:53321041-53321060 | None:intergenic | 55.0% | |
| GCGCCGCAATGGTATAGACT+AGG | + | Chr1:53320627-53320646 | MsG0180002931.01.T01:CDS | 55.0% | |
| GGATCTACGCTTCCTGTGAC+TGG | - | Chr1:53320378-53320397 | None:intergenic | 55.0% | |
| GTTGGAGAACAAGGCGAGTC+CGG | + | Chr1:53321019-53321038 | MsG0180002931.01.T01:CDS | 55.0% | |
| TCCGGGGAAAGACGAAGTTG+TGG | + | Chr1:53321037-53321056 | MsG0180002931.01.T01:CDS | 55.0% | |
| TGTTCTCCAACGTCAGCACG+AGG | - | Chr1:53321010-53321029 | None:intergenic | 55.0% | |
| TTGGAGAACAAGGCGAGTCC+GGG | + | Chr1:53321020-53321039 | MsG0180002931.01.T01:CDS | 55.0% | |
| TTGTACCACCGCGAATGCAC+CGG | - | Chr1:53321113-53321132 | None:intergenic | 55.0% | |
| ! | CGTGCTGACGTTGGAGAACA+AGG | + | Chr1:53321010-53321029 | MsG0180002931.01.T01:CDS | 55.0% |
| ATCATCGCCCGGTGCATTCG+CGG | + | Chr1:53321102-53321121 | MsG0180002931.01.T01:CDS | 60.0% | |
| CCACATGGAGGACAACGAGG+CGG | + | Chr1:53320246-53320265 | MsG0180002931.01.T01:CDS | 60.0% | |
| GACTCGGATGGATCATCGCC+CGG | + | Chr1:53321091-53321110 | MsG0180002931.01.T01:CDS | 60.0% | |
| GGCGCCAAAGGACTATCTGG+TGG | - | Chr1:53320612-53320631 | None:intergenic | 60.0% | |
| TGCGGCGCCAAAGGACTATC+TGG | - | Chr1:53320615-53320634 | None:intergenic | 60.0% | |
| TGGAGAACAAGGCGAGTCCG+GGG | + | Chr1:53321021-53321040 | MsG0180002931.01.T01:CDS | 60.0% | |
| TGGCCACATGGAGGACAACG+AGG | + | Chr1:53320243-53320262 | MsG0180002931.01.T01:CDS | 60.0% | |
| TGTACCACCGCGAATGCACC+GGG | - | Chr1:53321112-53321131 | None:intergenic | 60.0% | |
| CCGCCTCGTTGTCCTCCATG+TGG | - | Chr1:53320249-53320268 | None:intergenic | 65.0% | |
| GACAACGAGGCGGAACCGGT+TGG | + | Chr1:53320256-53320275 | MsG0180002931.01.T01:CDS | 65.0% | |
| GGAGGACAACGAGGCGGAAC+CGG | + | Chr1:53320252-53320271 | MsG0180002931.01.T01:CDS | 65.0% | |
| ATCGCCCGGTGCATTCGCGG+TGG | + | Chr1:53321105-53321124 | MsG0180002931.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 53320159 | 53322555 | 53320159 | ID=MsG0180002931.01;Name=MsG0180002931.01 |
| Chr1 | mRNA | 53320159 | 53322555 | 53320159 | ID=MsG0180002931.01.T01;Parent=MsG0180002931.01;Name=MsG0180002931.01.T01;_AED=0.12;_eAED=0.12;_QI=0|-1|0|1|-1|1|1|0|798 |
| Chr1 | exon | 53320159 | 53322555 | 53320159 | ID=MsG0180002931.01.T01:exon:47625;Parent=MsG0180002931.01.T01 |
| Chr1 | CDS | 53320159 | 53322555 | 53320159 | ID=MsG0180002931.01.T01:cds;Parent=MsG0180002931.01.T01 |
| Gene Sequence |
| Protein sequence |
