AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003771.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003771.01.T01 MTR_1g069420 93.929 593 27 3 1 592 1 585 0.0 1120
MsG0180003771.01.T01 MTR_4g030960 80.907 529 93 4 1 524 1 526 0.0 841
MsG0180003771.01.T01 MTR_3g006320 60.357 560 187 13 1 550 1 535 0.0 615
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003771.01.T01 AT1G71360 42.308 598 310 9 23 605 19 596 8.50e-150 445
MsG0180003771.01.T01 AT1G71360 43.216 597 306 10 23 605 45 622 5.69e-149 444
MsG0180003771.01.T01 AT1G22882 45.234 577 242 11 75 605 112 660 1.20e-145 436
MsG0180003771.01.T01 AT4G23950 41.809 409 215 6 196 602 170 557 3.78e-95 303
MsG0180003771.01.T01 AT4G23950 41.707 410 215 7 196 602 170 558 2.13e-93 298

Find 135 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTCATTCTCTTCAGCTTA+TGG 0.145583 1:-68037044 MsG0180003771.01.T01:CDS
TTTAGGTATCTTACCCATTT+TGG 0.166001 1:+68035854 None:intergenic
GGCACCTTTCCCTTCTTTAT+TGG 0.187268 1:+68036132 None:intergenic
AGACCTAAATTTAATTGTTT+TGG 0.201241 1:-68035462 MsG0180003771.01.T01:CDS
CCGGGAGAAGCAGGTTTCTT+TGG 0.240817 1:-68033174 MsG0180003771.01.T01:CDS
AACTACATGCTCCTCTTTAT+TGG 0.244993 1:+68036375 None:intergenic
TTTCAGCTGGATTATCAAAT+TGG 0.258814 1:-68036609 MsG0180003771.01.T01:CDS
GCTCCAAAACAATTAAATTT+AGG 0.263875 1:+68035459 None:intergenic
TTGTTCTTAAAGAGCCAAAA+TGG 0.265261 1:-68035868 MsG0180003771.01.T01:CDS
TTTGTGTGGGTAGCTCTTCC+TGG 0.271181 1:-68033019 MsG0180003771.01.T01:CDS
GGCTTTGAAGATTCAACTTT+AGG 0.274884 1:+68035837 None:intergenic
TTTATTGGAACCTAAAACTT+TGG 0.279402 1:+68036147 None:intergenic
ATCCCTGCTTAAGATATTAG+AGG 0.285746 1:+68036111 None:intergenic
TGCTTTGTTACGGCTATCTT+TGG 0.291860 1:-68033102 MsG0180003771.01.T01:CDS
TTTGAAAATATTGACATATC+TGG 0.300686 1:+68035415 None:intergenic
ACTCATTCTCTTCAGCTTAT+GGG 0.310092 1:-68037043 MsG0180003771.01.T01:CDS
GATTTCAAAGTCTTTCAAAT+TGG 0.322234 1:+68035973 None:intergenic
GTTACGGCTATCTTTGGATA+TGG 0.325038 1:-68033096 MsG0180003771.01.T01:CDS
TATTGACATATCTGGAGTTT+AGG 0.333964 1:+68035423 None:intergenic
CAACCAGTTGGCAGGATGCC+TGG 0.353646 1:-68035527 MsG0180003771.01.T01:CDS
ATGCTGGTGATCTCAATTCT+TGG 0.382007 1:-68035186 MsG0180003771.01.T01:CDS
TTTCATTGATTGCTTTGTTA+CGG 0.388387 1:-68033112 MsG0180003771.01.T01:CDS
ACTGTTTGCCGTTTCATGAT+TGG 0.392357 1:+68035580 None:intergenic
ACGTAAAGCTCGCATGGAAT+TGG 0.396219 1:-68037160 MsG0180003771.01.T01:CDS
GAACTTTCCAACAGATGCTT+GGG 0.398646 1:-68035939 MsG0180003771.01.T01:CDS
AACGTTACCCCTCCCTCGTT+AGG 0.398823 1:+68037243 None:intergenic
ACTTAGTGTGCAATAAAATT+CGG 0.412768 1:+68035805 None:intergenic
TGGAAGTGTAATACATAGAT+TGG 0.414499 1:-68036215 MsG0180003771.01.T01:CDS
TGAACTTTCCAACAGATGCT+TGG 0.423228 1:-68035940 MsG0180003771.01.T01:CDS
ACTTTGGGCAGAGGAAGAAA+TGG 0.424463 1:+68037110 None:intergenic
GGTGGAGGTGCTGAGGCTAT+TGG 0.424475 1:-68036481 MsG0180003771.01.T01:CDS
GTCTCAAGTTTCTTTGCAGT+TGG 0.424631 1:-68035161 MsG0180003771.01.T01:CDS
CAAGACAATCTATTTGCATC+TGG 0.428687 1:-68035722 MsG0180003771.01.T01:CDS
GGTTGACGGATTTCTTCAAC+TGG 0.428942 1:+68035545 None:intergenic
AACCAGTTGGCAGGATGCCT+GGG 0.431096 1:-68035526 MsG0180003771.01.T01:CDS
CGGATTTCTTCAACTGGAGC+AGG 0.434396 1:+68035551 None:intergenic
TTGAATCTTCAAAGCCACTA+TGG 0.437657 1:-68035830 MsG0180003771.01.T01:CDS
GCTGAGGCTATTGGTTTAGT+TGG 0.437987 1:-68036472 MsG0180003771.01.T01:CDS
CCAAAGAAACCTGCTTCTCC+CGG 0.438181 1:+68033174 None:intergenic
TTGAAAGACTTTGAAATCCA+TGG 0.438972 1:-68035968 MsG0180003771.01.T01:CDS
CTTTGGGCAGAGGAAGAAAT+GGG 0.450705 1:+68037111 None:intergenic
GAAGCTTTATTATACTCTAA+AGG 0.451944 1:-68036502 MsG0180003771.01.T01:CDS
CAATTATGCTTCGGCATCAA+AGG 0.453952 1:-68036173 MsG0180003771.01.T01:CDS
GGTCCGAGGTTGAAAAGGTC+CGG 0.457513 1:-68033193 MsG0180003771.01.T01:CDS
TTGAGCATGCCTCACATTTG+AGG 0.457552 1:+68035895 None:intergenic
GTGCCTCTAATATCTTAAGC+AGG 0.467275 1:-68036114 MsG0180003771.01.T01:CDS
GCCGTTTCATGATTGGAAGA+AGG 0.469531 1:+68035587 None:intergenic
ACCTCAAAACAGCATTGTCC+TGG 0.471683 1:+68035128 None:intergenic
TAATAAAGAACATACTGATT+CGG 0.472142 1:-68036398 MsG0180003771.01.T01:CDS
TCCCCAGGCATCCTGCCAAC+TGG 0.474677 1:+68035524 None:intergenic
TGAAAAGGTCCGGGAGAAGC+AGG 0.475416 1:-68033183 MsG0180003771.01.T01:CDS
CCGTTTCATGATTGGAAGAA+GGG 0.475600 1:+68035588 None:intergenic
ATCAGTTCTAAAGTTAAGTC+AGG 0.481166 1:-68036250 MsG0180003771.01.T01:CDS
ACTCTCAGCAGGATCGGGAT+GGG 0.483817 1:+68035667 None:intergenic
ACGTTACCCCTCCCTCGTTA+GGG 0.484289 1:+68037244 None:intergenic
TTATCTCGGGCTGTGCCTCT+CGG 0.487582 1:-68036298 MsG0180003771.01.T01:CDS
GGATCTGAAGAGCTTTCAGC+TGG 0.490377 1:-68036622 MsG0180003771.01.T01:CDS
TGTTCACTCTCAGCAGGATC+GGG 0.492452 1:+68035662 None:intergenic
TAAGAATCTCATTGACCAGC+AGG 0.494809 1:-68035333 MsG0180003771.01.T01:CDS
AAGTCAGGCACTGATCAATC+TGG 0.498645 1:-68036235 MsG0180003771.01.T01:CDS
CACTCTCAGCAGGATCGGGA+TGG 0.499067 1:+68035666 None:intergenic
AAAATCTGATCTCTTATCTC+GGG 0.500552 1:-68036311 MsG0180003771.01.T01:CDS
CCCTTCTTCCAATCATGAAA+CGG 0.500904 1:-68035588 MsG0180003771.01.T01:CDS
TGTTCTTAAAGAGCCAAAAT+GGG 0.502493 1:-68035867 MsG0180003771.01.T01:CDS
GTTCTTCAGAAGATTAAAGA+AGG 0.507702 1:-68035359 MsG0180003771.01.T01:CDS
ATTCAGGTCCGAGGTTGAAA+AGG 0.511149 1:-68033198 MsG0180003771.01.T01:intron
GCAGGTTTCTTTGGAAAACA+AGG 0.518116 1:-68033165 MsG0180003771.01.T01:CDS
TTGATAGAACAGTTGACTCC+AGG 0.519777 1:-68033046 MsG0180003771.01.T01:CDS
AGTGGTGTTTATGCGCTACT+TGG 0.521605 1:-68036427 MsG0180003771.01.T01:CDS
AAATCCGTCAACCAGTTGGC+AGG 0.521805 1:-68035535 MsG0180003771.01.T01:CDS
TACTGATTCGGCCAATAAAG+AGG 0.522006 1:-68036386 MsG0180003771.01.T01:CDS
CTCTCAGCAGGATCGGGATG+GGG 0.523175 1:+68035668 None:intergenic
TTGGAAAGTTCAGACTTCCA+TGG 0.523368 1:+68035951 None:intergenic
TGCAGAATACAATTATGCTT+CGG 0.524753 1:-68036182 MsG0180003771.01.T01:CDS
GCATCCTGCCAACTGGTTGA+CGG 0.530318 1:+68035531 None:intergenic
GAAGAAGGGATATCTGAAGC+AGG 0.532449 1:+68035602 None:intergenic
GTCTTGATGAGTTCAAGAGC+AGG 0.532869 1:-68036276 MsG0180003771.01.T01:CDS
TGAACATGTTCACTCTCAGC+AGG 0.537283 1:+68035656 None:intergenic
AGGAAAACCCAAGCATCTGT+TGG 0.540357 1:+68035932 None:intergenic
ATGTTCACTCTCAGCAGGAT+CGG 0.540435 1:+68035661 None:intergenic
TAATTGTATTCTGCACCTCC+AGG 0.543624 1:+68036190 None:intergenic
GTCCGAGGTTGAAAAGGTCC+GGG 0.545030 1:-68033192 MsG0180003771.01.T01:CDS
AATAAAATTCGGAACCATAG+TGG 0.546010 1:+68035816 None:intergenic
AATTGGAATCAAGTTAACTA+CGG 0.547342 1:-68036592 MsG0180003771.01.T01:CDS
AATTATGCTTCGGCATCAAA+GGG 0.548259 1:-68036172 MsG0180003771.01.T01:CDS
GCAGTTGGATCATATACTCC+AGG 0.548439 1:-68035146 MsG0180003771.01.T01:CDS
GGTGTTTATGCGCTACTTGG+TGG 0.549516 1:-68036424 MsG0180003771.01.T01:CDS
TTATTATACTCTAAAGGTGG+AGG 0.555825 1:-68036496 MsG0180003771.01.T01:CDS
CTCTAAAGGTGGAGGTGCTG+AGG 0.557047 1:-68036488 MsG0180003771.01.T01:CDS
AATCTATTTGCATCTGGAGA+AGG 0.558454 1:-68035716 MsG0180003771.01.T01:CDS
TCACTCACTGATAGAGAAAG+TGG 0.559066 1:-68036445 MsG0180003771.01.T01:CDS
AGAACTTTCAGAAGAAACCT+TGG 0.560587 1:-68036035 MsG0180003771.01.T01:CDS
GAGATCACGTAAAGCTCGCA+TGG 0.566031 1:-68037166 MsG0180003771.01.T01:CDS
CATTCATCCCTAACGAGGGA+GGG 0.568883 1:-68037251 MsG0180003771.01.T01:five_prime_UTR
ATTCATCCCTAACGAGGGAG+GGG 0.569677 1:-68037250 MsG0180003771.01.T01:five_prime_UTR
CTCGTGCAGGCAAAATATGC+TGG 0.571157 1:-68035202 MsG0180003771.01.T01:intron
CAAATGTGAGGCATGCTCAA+AGG 0.572982 1:-68035892 MsG0180003771.01.T01:CDS
ATGGGGTTATGAAGAAGAGA+AGG 0.573199 1:+68037129 None:intergenic
TTCTTAATAATTCAGGTCCG+AGG 0.575561 1:-68033207 MsG0180003771.01.T01:intron
TTAAATTTAGGTCTAGAGTA+CGG 0.576670 1:+68035471 None:intergenic
AGCTTATGGGTCACTCACAC+AGG 0.578454 1:-68037030 MsG0180003771.01.T01:intron
AGGGATATCTGAAGCAGGGT+GGG 0.581632 1:+68035607 None:intergenic
GGTTCCAATAAAGAAGGGAA+AGG 0.581843 1:-68036136 MsG0180003771.01.T01:CDS
ATCCTCCAGCATCCTCTCAA+CGG 0.584718 1:+68035757 None:intergenic
AATTTCTCCTCCACAGAACA+CGG 0.585511 1:+68036067 None:intergenic
TGATAGAACAGTTGACTCCA+GGG 0.585751 1:-68033045 MsG0180003771.01.T01:CDS
GTAATACATAGATTGGAGCC+TGG 0.586563 1:-68036208 MsG0180003771.01.T01:CDS
GCTACCCACACAAAATTCCC+TGG 0.586908 1:+68033028 None:intergenic
TACGCACTATAACATCCTGC+TGG 0.589181 1:+68035318 None:intergenic
CAGGTTTCTTTGGAAAACAA+GGG 0.589978 1:-68033164 MsG0180003771.01.T01:CDS
ATCTTGAGAACAGTATCCCC+AGG 0.590052 1:+68035509 None:intergenic
TGCCTCTAATATCTTAAGCA+GGG 0.597312 1:-68036113 MsG0180003771.01.T01:CDS
GAGTATAATAAAGCTTCTGA+CGG 0.598371 1:+68036508 None:intergenic
GCTTTATTATACTCTAAAGG+TGG 0.599801 1:-68036499 MsG0180003771.01.T01:CDS
TTGAGGCAGTAAAATTCCCA+AGG 0.599930 1:+68035912 None:intergenic
GGATGCCGTTGAGAGGATGC+TGG 0.600025 1:-68035762 MsG0180003771.01.T01:CDS
TCTTCGAAATCCGTGTTCTG+TGG 0.607278 1:-68036077 MsG0180003771.01.T01:CDS
AAAATGGAAACTTTGGGCAG+AGG 0.607547 1:+68037101 None:intergenic
TTGGTGTGGATGCCGTTGAG+AGG 0.612570 1:-68035769 MsG0180003771.01.T01:CDS
TCGAAATCCGTGTTCTGTGG+AGG 0.612846 1:-68036074 MsG0180003771.01.T01:CDS
TCATTCATCCCTAACGAGGG+AGG 0.615828 1:-68037252 MsG0180003771.01.T01:five_prime_UTR
GAAGAAATCCGTCAACCAGT+TGG 0.616669 1:-68035539 MsG0180003771.01.T01:CDS
CTTGTCATTCATCCCTAACG+AGG 0.640140 1:-68037256 MsG0180003771.01.T01:five_prime_UTR
TCTTGATGAGTTCAAGAGCA+GGG 0.640578 1:-68036275 MsG0180003771.01.T01:CDS
TATTTCTACAGTATCTACCA+AGG 0.649127 1:+68036018 None:intergenic
ACCAGTTGGCAGGATGCCTG+GGG 0.649182 1:-68035525 MsG0180003771.01.T01:CDS
AAGAAGGGATATCTGAAGCA+GGG 0.657621 1:+68035603 None:intergenic
AAGGGATATCTGAAGCAGGG+TGG 0.666617 1:+68035606 None:intergenic
ACTCAATAATAGAAGAAACC+AGG 0.679333 1:+68033001 None:intergenic
TTGTCATTCATCCCTAACGA+GGG 0.692585 1:-68037255 MsG0180003771.01.T01:five_prime_UTR
ATACATAGATTGGAGCCTGG+AGG 0.724979 1:-68036205 MsG0180003771.01.T01:CDS
TGCCGTTGAGAGGATGCTGG+AGG 0.725275 1:-68035759 MsG0180003771.01.T01:CDS
TTGAACTCATCAAGACCGAG+AGG 0.728710 1:+68036283 None:intergenic
ATTATGCAGAAGTCAAGTCG+CGG 0.736164 1:+68037203 None:intergenic
TTTGGGCAGAGGAAGAAATG+GGG 0.747784 1:+68037112 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGGAATTAAATATAATAA+TGG + Chr1:68035421-68035440 None:intergenic 10.0%
!!! ATTAAATATAATAATGGAAA+TGG + Chr1:68035415-68035434 None:intergenic 10.0%
!!! ATTTTTTTTCTTAATAATTC+AGG - Chr1:68036991-68037010 MsG0180003771.01.T01:intron 10.0%
!!! AAACCAAAATTTCAATTTTT+AGG - Chr1:68035983-68036002 MsG0180003771.01.T01:CDS 15.0%
!!! TTCTATTTCTTAATAAACTA+TGG + Chr1:68036907-68036926 None:intergenic 15.0%
!!! TTTATTATTTTGTATGTAGA+TGG - Chr1:68033562-68033581 MsG0180003771.01.T01:intron 15.0%
!!! TTTTATTGAAATAATGAGAA+AGG - Chr1:68036638-68036657 MsG0180003771.01.T01:intron 15.0%
!! ACATGTGAATAAACTATATT+GGG + Chr1:68035208-68035227 None:intergenic 20.0%
!! ATAACAAGATATCTCAAAAA+TGG + Chr1:68037267-68037286 None:intergenic 20.0%
!! ATCATAAATGATCTATCAAT+CGG + Chr1:68036184-68036203 None:intergenic 20.0%
!! ATTGATAGATCATTTATGAT+TGG - Chr1:68036184-68036203 MsG0180003771.01.T01:CDS 20.0%
!! ATTGTAATTTCTGTAACTTA+TGG + Chr1:68036051-68036070 None:intergenic 20.0%
!! TACATGTGAATAAACTATAT+TGG + Chr1:68035209-68035228 None:intergenic 20.0%
!! TACCTAGTGTAAATATTAAT+TGG - Chr1:68035168-68035187 MsG0180003771.01.T01:CDS 20.0%
!! TATTCACATGTATTAGAATA+AGG - Chr1:68035217-68035236 MsG0180003771.01.T01:intron 20.0%
!! TATTTCTTAATAAACTATGG+TGG + Chr1:68036904-68036923 None:intergenic 20.0%
!! TTAAAAATTGTGTGATTCAA+AGG - Chr1:68036112-68036131 MsG0180003771.01.T01:CDS 20.0%
!! TTGATAGATCATTTATGATT+GGG - Chr1:68036185-68036204 MsG0180003771.01.T01:CDS 20.0%
!! TTGTAAATAGATATGTGTTA+GGG + Chr1:68036525-68036544 None:intergenic 20.0%
!! TTTGAAAATATTGACATATC+TGG + Chr1:68034793-68034812 None:intergenic 20.0%
!!! AGACCTAAATTTAATTGTTT+TGG - Chr1:68034743-68034762 MsG0180003771.01.T01:intron 20.0%
!!! CAAAATTTCAATTTTTAGGA+TGG - Chr1:68035987-68036006 MsG0180003771.01.T01:CDS 20.0%
!!! CATCCTAAAAATTGAAATTT+TGG + Chr1:68035989-68036008 None:intergenic 20.0%
!!! TAAATTTAATTGTTTTGGAG+CGG - Chr1:68034748-68034767 MsG0180003771.01.T01:intron 20.0%
!!! TAATAAAGAACATACTGATT+CGG - Chr1:68033807-68033826 MsG0180003771.01.T01:intron 20.0%
! AAAAATAATTGGATGACAGA+TGG + Chr1:68033502-68033521 None:intergenic 25.0%
! AAAAATCTGATCTCTTATCT+CGG - Chr1:68033893-68033912 MsG0180003771.01.T01:intron 25.0%
! AAACTATATAAGCACAACTT+AGG + Chr1:68035861-68035880 None:intergenic 25.0%
! AACAAATTAACCACTAACAT+CGG + Chr1:68033271-68033290 None:intergenic 25.0%
! AAGTTGTGCTTATATAGTTT+GGG - Chr1:68035861-68035880 MsG0180003771.01.T01:CDS 25.0%
! AATAAACCTCCTATTTATAC+AGG - Chr1:68036768-68036787 MsG0180003771.01.T01:intron 25.0%
! AATAAACTATGGTGGTAAAA+AGG + Chr1:68036896-68036915 None:intergenic 25.0%
! AATTGGAATCAAGTTAACTA+CGG - Chr1:68033613-68033632 MsG0180003771.01.T01:intron 25.0%
! ACATGTATTAGAATAAGGAT+GGG - Chr1:68035222-68035241 MsG0180003771.01.T01:intron 25.0%
! ACTTAGTGTGCAATAAAATT+CGG + Chr1:68034403-68034422 None:intergenic 25.0%
! AGTTTACTGATAGATGAATA+AGG + Chr1:68035439-68035458 None:intergenic 25.0%
! ATTCATCTATCAGTAAACTT+CGG - Chr1:68035440-68035459 MsG0180003771.01.T01:CDS 25.0%
! ATTTCCAAAATGAATAGAGT+AGG + Chr1:68034974-68034993 None:intergenic 25.0%
! CTACGAACTATATAGTTATT+TGG - Chr1:68036961-68036980 MsG0180003771.01.T01:intron 25.0%
! GATTTCAAAGTCTTTCAAAT+TGG + Chr1:68034235-68034254 None:intergenic 25.0%
! GCTCCAAAACAATTAAATTT+AGG + Chr1:68034749-68034768 None:intergenic 25.0%
! GTTGTAAATAGATATGTGTT+AGG + Chr1:68036526-68036545 None:intergenic 25.0%
! TAAGTTGTGCTTATATAGTT+TGG - Chr1:68035860-68035879 MsG0180003771.01.T01:CDS 25.0%
! TGCAACGAAGTAAAAATAAT+TGG + Chr1:68033513-68033532 None:intergenic 25.0%
! TTACTTTGTAGTCATTTGTT+AGG - Chr1:68036584-68036603 MsG0180003771.01.T01:CDS 25.0%
! TTATCAAATAAAGGCTATAG+TGG - Chr1:68033381-68033400 MsG0180003771.01.T01:intron 25.0%
! TTGACATTATTTACTGTTTC+TGG - Chr1:68036827-68036846 MsG0180003771.01.T01:intron 25.0%
! TTGGTAAAAATGGAAACTTT+GGG + Chr1:68033113-68033132 None:intergenic 25.0%
! TTTATTGGAACCTAAAACTT+TGG + Chr1:68034061-68034080 None:intergenic 25.0%
!! AAATTTCTGAAAGAAAGACA+AGG - Chr1:68036210-68036229 MsG0180003771.01.T01:CDS 25.0%
!! ACTCTTTTCAATTCAATTCT+GGG + Chr1:68036612-68036631 None:intergenic 25.0%
!! CACAAAGTGTTATCAAATAA+AGG - Chr1:68033372-68033391 MsG0180003771.01.T01:intron 25.0%
!! TGGATCTTAAAATTTGAGTT+GGG + Chr1:68035928-68035947 None:intergenic 25.0%
!! TTAAATTTAGGTCTAGAGTA+CGG + Chr1:68034737-68034756 None:intergenic 25.0%
!! TTTCATTGATTGCTTTGTTA+CGG - Chr1:68037093-68037112 MsG0180003771.01.T01:CDS 25.0%
!!! ACTTTACAAGTTGGTTTTAT+AGG - Chr1:68035892-68035911 MsG0180003771.01.T01:CDS 25.0%
!!! GAAGCTTTATTATACTCTAA+AGG - Chr1:68033703-68033722 MsG0180003771.01.T01:intron 25.0%
!!! TTTTAGGTTCCAATAAAGAA+GGG - Chr1:68034064-68034083 MsG0180003771.01.T01:intron 25.0%
AAAATCTGATCTCTTATCTC+GGG - Chr1:68033894-68033913 MsG0180003771.01.T01:intron 30.0%
AATAAAATTCGGAACCATAG+TGG + Chr1:68034392-68034411 None:intergenic 30.0%
AATCAAAAAGCAGAGAAAGT+TGG + Chr1:68033132-68033151 None:intergenic 30.0%
ACTCAATAATAGAAGAAACC+AGG + Chr1:68037207-68037226 None:intergenic 30.0%
AGAAACAAAACAAGAAAGGA+TGG + Chr1:68033218-68033237 None:intergenic 30.0%
AGAATCAGAAAAAACCCAAT+TGG - Chr1:68036415-68036434 MsG0180003771.01.T01:CDS 30.0%
AGTGAACTTCTATTGAAACA+TGG - Chr1:68035620-68035639 MsG0180003771.01.T01:CDS 30.0%
CACATGTATTAGAATAAGGA+TGG - Chr1:68035221-68035240 MsG0180003771.01.T01:intron 30.0%
CATACGTCTCATAATCTTAT+TGG - Chr1:68033535-68033554 MsG0180003771.01.T01:intron 30.0%
CTGGATCTTAAAATTTGAGT+TGG + Chr1:68035929-68035948 None:intergenic 30.0%
GAAAGAAAGACAAGGAAAAA+GGG - Chr1:68036218-68036237 MsG0180003771.01.T01:CDS 30.0%
GAGCAAGTATTTATAAGTGA+GGG + Chr1:68033476-68033495 None:intergenic 30.0%
GAGTATAATAAAGCTTCTGA+CGG + Chr1:68033700-68033719 None:intergenic 30.0%
GGAAAGAAACAAAACAAGAA+AGG + Chr1:68033222-68033241 None:intergenic 30.0%
GGCCAATTAATATTTACACT+AGG + Chr1:68035173-68035192 None:intergenic 30.0%
GTAGGATATCCTGTATAAAT+AGG + Chr1:68036780-68036799 None:intergenic 30.0%
GTTCTTCAGAAGATTAAAGA+AGG - Chr1:68034846-68034865 MsG0180003771.01.T01:intron 30.0%
TAATTTCCTAAACGACTCTT+AGG - Chr1:68036492-68036511 MsG0180003771.01.T01:CDS 30.0%
TCAATAGAAGTTCACTTGTT+GGG + Chr1:68035616-68035635 None:intergenic 30.0%
TGAAAGAAAGACAAGGAAAA+AGG - Chr1:68036217-68036236 MsG0180003771.01.T01:CDS 30.0%
TGAGCAAGTATTTATAAGTG+AGG + Chr1:68033477-68033496 None:intergenic 30.0%
TGCAGAATACAATTATGCTT+CGG - Chr1:68034023-68034042 MsG0180003771.01.T01:intron 30.0%
TGTATGACGATAATACACTT+AGG - Chr1:68036800-68036819 MsG0180003771.01.T01:intron 30.0%
TGTTCTTAAAGAGCCAAAAT+GGG - Chr1:68034338-68034357 MsG0180003771.01.T01:intron 30.0%
TTATTTACGAACTGATGCAT+CGG - Chr1:68036023-68036042 MsG0180003771.01.T01:CDS 30.0%
TTCAATAGAAGTTCACTTGT+TGG + Chr1:68035617-68035636 None:intergenic 30.0%
TTGTTCTTAAAGAGCCAAAA+TGG - Chr1:68034337-68034356 MsG0180003771.01.T01:intron 30.0%
TTTCAGCTGGATTATCAAAT+TGG - Chr1:68033596-68033615 MsG0180003771.01.T01:intron 30.0%
! CACTCTTTTCAATTCAATTC+TGG + Chr1:68036613-68036632 None:intergenic 30.0%
! CTATCCTACTCTATTCATTT+TGG - Chr1:68034967-68034986 MsG0180003771.01.T01:intron 30.0%
! GCTTTATTATACTCTAAAGG+TGG - Chr1:68033706-68033725 MsG0180003771.01.T01:intron 30.0%
! GTTGGTAAAAATGGAAACTT+TGG + Chr1:68033114-68033133 None:intergenic 30.0%
! TATAGTGCGTAATTTTGTCA+TGG - Chr1:68034899-68034918 MsG0180003771.01.T01:intron 30.0%
! TATTGACATATCTGGAGTTT+AGG + Chr1:68034785-68034804 None:intergenic 30.0%
! TATTTCTACAGTATCTACCA+AGG + Chr1:68034190-68034209 None:intergenic 30.0%
! TGGAAGTGTAATACATAGAT+TGG - Chr1:68033990-68034009 MsG0180003771.01.T01:intron 30.0%
! TTATTATACTCTAAAGGTGG+AGG - Chr1:68033709-68033728 MsG0180003771.01.T01:intron 30.0%
! TTTAGGTATCTTACCCATTT+TGG + Chr1:68034354-68034373 None:intergenic 30.0%
!! ATCAGTTCTAAAGTTAAGTC+AGG - Chr1:68033955-68033974 MsG0180003771.01.T01:intron 30.0%
!! CTAAGTGTTGTTGAAGTTTT+TGG - Chr1:68034417-68034436 MsG0180003771.01.T01:intron 30.0%
!! GTTAGTGGTTAATTTGTTCT+CGG - Chr1:68033273-68033292 MsG0180003771.01.T01:intron 30.0%
!! TTGAAAGACTTTGAAATCCA+TGG - Chr1:68034237-68034256 MsG0180003771.01.T01:intron 30.0%
!!! GTTTTAGGTTCCAATAAAGA+AGG - Chr1:68034063-68034082 MsG0180003771.01.T01:intron 30.0%
!!! TTCTCTGCTTTTTGATTTGT+GGG - Chr1:68033135-68033154 MsG0180003771.01.T01:CDS 30.0%
!!! TTGGTTTTATAGGTTGAGTT+AGG - Chr1:68035902-68035921 MsG0180003771.01.T01:CDS 30.0%
!!! TTTCTCTGCTTTTTGATTTG+TGG - Chr1:68033134-68033153 MsG0180003771.01.T01:CDS 30.0%
AAATAGTGAACTACTGACAG+TGG - Chr1:68035559-68035578 MsG0180003771.01.T01:CDS 35.0%
AACAGAGACAATTTCACAAC+AGG + Chr1:68035354-68035373 None:intergenic 35.0%
AACTACATGCTCCTCTTTAT+TGG + Chr1:68033833-68033852 None:intergenic 35.0%
AATAGTGAACTACTGACAGT+GGG - Chr1:68035560-68035579 MsG0180003771.01.T01:CDS 35.0%
AATCTATTTGCATCTGGAGA+AGG - Chr1:68034489-68034508 MsG0180003771.01.T01:intron 35.0%
AATTATGCTTCGGCATCAAA+GGG - Chr1:68034033-68034052 MsG0180003771.01.T01:intron 35.0%
ACAGAGACAATTTCACAACA+GGG + Chr1:68035353-68035372 None:intergenic 35.0%
ACTCATTCTCTTCAGCTTAT+GGG - Chr1:68033162-68033181 MsG0180003771.01.T01:CDS 35.0%
AGAACTTTCAGAAGAAACCT+TGG - Chr1:68034170-68034189 MsG0180003771.01.T01:intron 35.0%
AGGAGGTTTATTGAGTTAGA+GGG + Chr1:68036760-68036779 None:intergenic 35.0%
ATCCCTGCTTAAGATATTAG+AGG + Chr1:68034097-68034116 None:intergenic 35.0%
ATTAATTGGCCCAATAGACA+GGG - Chr1:68035182-68035201 MsG0180003771.01.T01:CDS 35.0%
ATTTAGTCCTACATTGCCTA+AGG - Chr1:68035835-68035854 MsG0180003771.01.T01:CDS 35.0%
ATTTCTGACCATATGAACTC+AGG - Chr1:68035128-68035147 MsG0180003771.01.T01:intron 35.0%
CAAGACAATCTATTTGCATC+TGG - Chr1:68034483-68034502 MsG0180003771.01.T01:intron 35.0%
GATGGGCATTTATTGCTAAT+CGG - Chr1:68035239-68035258 MsG0180003771.01.T01:intron 35.0%
GATGTATTCAAACTTGACGT+TGG - Chr1:68035704-68035723 MsG0180003771.01.T01:CDS 35.0%
GCACTATTATTGAACTTCTC+TGG + Chr1:68035387-68035406 None:intergenic 35.0%
GGATATCCTGTATAAATAGG+AGG + Chr1:68036777-68036796 None:intergenic 35.0%
GTGTATTATCGTCATACAGT+AGG + Chr1:68036798-68036817 None:intergenic 35.0%
TACTCATTCTCTTCAGCTTA+TGG - Chr1:68033161-68033180 MsG0180003771.01.T01:CDS 35.0%
TAGGAGGTTTATTGAGTTAG+AGG + Chr1:68036761-68036780 None:intergenic 35.0%
TATTAATTGGCCCAATAGAC+AGG - Chr1:68035181-68035200 MsG0180003771.01.T01:CDS 35.0%
TCTGATTCTTTCCTTAACCT+TGG + Chr1:68036404-68036423 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + Chr1:68036318-68036337 None:intergenic 35.0%
TGCCTCTAATATCTTAAGCA+GGG - Chr1:68034092-68034111 MsG0180003771.01.T01:intron 35.0%
TGCTAATCGGTTGTTTATGT+TGG - Chr1:68035252-68035271 MsG0180003771.01.T01:intron 35.0%
TGTTGTGAAATTGTCTCTGT+TGG - Chr1:68035353-68035372 MsG0180003771.01.T01:CDS 35.0%
TTCTTAATAATTCAGGTCCG+AGG - Chr1:68036998-68037017 MsG0180003771.01.T01:intron 35.0%
TTGAATCTTCAAAGCCACTA+TGG - Chr1:68034375-68034394 MsG0180003771.01.T01:intron 35.0%
TTGTTGGTATCATAGCATAG+CGG - Chr1:68033308-68033327 MsG0180003771.01.T01:intron 35.0%
TTGTTTATGTTGGAGAGACT+AGG - Chr1:68035262-68035281 MsG0180003771.01.T01:intron 35.0%
! ATTTTACTGCCTCAAATGTG+AGG - Chr1:68034301-68034320 MsG0180003771.01.T01:intron 35.0%
! CAGGTTTCTTTGGAAAACAA+GGG - Chr1:68037041-68037060 MsG0180003771.01.T01:CDS 35.0%
! GAAAAGTGGATTCTTTCCTT+GGG + Chr1:68036448-68036467 None:intergenic 35.0%
! GTTCAGCAAAACACTTTTGA+GGG - Chr1:68034567-68034586 MsG0180003771.01.T01:intron 35.0%
! TCTTGTTATCTTGTGTGAGT+TGG - Chr1:68037278-68037297 MsG0180003771.01.T01:five_prime_UTR 35.0%
! TGAAAAGTGGATTCTTTCCT+TGG + Chr1:68036449-68036468 None:intergenic 35.0%
! TGTTCAGCAAAACACTTTTG+AGG - Chr1:68034566-68034585 MsG0180003771.01.T01:intron 35.0%
! TTCAGCAAAACACTTTTGAG+GGG - Chr1:68034568-68034587 MsG0180003771.01.T01:intron 35.0%
!! CTCAAAAATGGACTGTCAAA+AGG + Chr1:68037255-68037274 None:intergenic 35.0%
!! GAAAGAATCCACTTTTCAAC+GGG - Chr1:68036451-68036470 MsG0180003771.01.T01:CDS 35.0%
!! GCAGAGAAAGTTGGTAAAAA+TGG + Chr1:68033123-68033142 None:intergenic 35.0%
!! GGAAAGAATCCACTTTTCAA+CGG - Chr1:68036450-68036469 MsG0180003771.01.T01:CDS 35.0%
!! GGCTTTGAAGATTCAACTTT+AGG + Chr1:68034371-68034390 None:intergenic 35.0%
!!! AATTGTTTTGGAGCGGTATA+TGG - Chr1:68034755-68034774 MsG0180003771.01.T01:intron 35.0%
!!! GTTTTGTTTCTTTCCATTCC+AGG - Chr1:68033227-68033246 MsG0180003771.01.T01:intron 35.0%
!!! TGTTGTTGAAGTTTTTGGTG+TGG - Chr1:68034422-68034441 MsG0180003771.01.T01:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - Chr1:68036317-68036336 MsG0180003771.01.T01:CDS 35.0%
!!! TTTTTTTGTCACTGACCAGT+CGG + Chr1:68035541-68035560 None:intergenic 35.0%
AAAATGGAAACTTTGGGCAG+AGG + Chr1:68033107-68033126 None:intergenic 40.0%
AATGAGCTCCTGAGTTCATA+TGG + Chr1:68035139-68035158 None:intergenic 40.0%
AATTTCTCCTCCACAGAACA+CGG + Chr1:68034141-68034160 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + Chr1:68036324-68036343 None:intergenic 40.0%
AGAGTAGTGACTCTTTGTGA+AGG + Chr1:68036706-68036725 None:intergenic 40.0%
AGTACACCTAAGAGTCGTTT+AGG + Chr1:68036501-68036520 None:intergenic 40.0%
AGTAGTGACTCTTTGTGAAG+GGG + Chr1:68036704-68036723 None:intergenic 40.0%
AGTTAGCTACTTAGCTGAAG+TGG + Chr1:68036560-68036579 None:intergenic 40.0%
ATAAGCACAACTTAGGCCTT+AGG + Chr1:68035854-68035873 None:intergenic 40.0%
ATGCTGGTGATCTCAATTCT+TGG - Chr1:68035019-68035038 MsG0180003771.01.T01:intron 40.0%
ATGGGGTTATGAAGAAGAGA+AGG + Chr1:68033079-68033098 None:intergenic 40.0%
ATTATGCAGAAGTCAAGTCG+CGG + Chr1:68033005-68033024 None:intergenic 40.0%
ATTGGTACTCCCTCGAAAAA+CGG - Chr1:68036145-68036164 MsG0180003771.01.T01:CDS 40.0%
CAATTATGCTTCGGCATCAA+AGG - Chr1:68034032-68034051 MsG0180003771.01.T01:intron 40.0%
CAGAAGCTCGTCATCAAAAT+CGG + Chr1:68035958-68035977 None:intergenic 40.0%
CAGAATAAACTAGCCAGATC+TGG - Chr1:68035590-68035609 MsG0180003771.01.T01:CDS 40.0%
CAGAGACAATTTCACAACAG+GGG + Chr1:68035352-68035371 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + Chr1:68036323-68036342 None:intergenic 40.0%
CATCTATCAGTAAACTTCGG+AGG - Chr1:68035443-68035462 MsG0180003771.01.T01:CDS 40.0%
CCCTTCTTCCAATCATGAAA+CGG - Chr1:68034617-68034636 MsG0180003771.01.T01:intron 40.0%
CCGTTTCATGATTGGAAGAA+GGG + Chr1:68034620-68034639 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + Chr1:68036292-68036311 None:intergenic 40.0%
GAACTCCGATAGAAAGACTA+AGG + Chr1:68035507-68035526 None:intergenic 40.0%
GAACTTTCCAACAGATGCTT+GGG - Chr1:68034266-68034285 MsG0180003771.01.T01:intron 40.0%
GAGGTTTATTGAGTTAGAGG+GGG + Chr1:68036758-68036777 None:intergenic 40.0%
GAGTAGTGACTCTTTGTGAA+GGG + Chr1:68036705-68036724 None:intergenic 40.0%
GCTGTACTCACTTTACAAGT+TGG - Chr1:68035883-68035902 MsG0180003771.01.T01:CDS 40.0%
GGAGGTTTATTGAGTTAGAG+GGG + Chr1:68036759-68036778 None:intergenic 40.0%
GGTTCCAATAAAGAAGGGAA+AGG - Chr1:68034069-68034088 MsG0180003771.01.T01:intron 40.0%
GTAATACATAGATTGGAGCC+TGG - Chr1:68033997-68034016 MsG0180003771.01.T01:intron 40.0%
GTCTCAAGTTTCTTTGCAGT+TGG - Chr1:68035044-68035063 MsG0180003771.01.T01:intron 40.0%
GTGCCTCTAATATCTTAAGC+AGG - Chr1:68034091-68034110 MsG0180003771.01.T01:intron 40.0%
GTTACGGCTATCTTTGGATA+TGG - Chr1:68037109-68037128 MsG0180003771.01.T01:CDS 40.0%
GTTGCGTACAATACACCAAA+TGG + Chr1:68036296-68036315 None:intergenic 40.0%
GTTGTTGTCATGTGACTGTA+AGG + Chr1:68036368-68036387 None:intergenic 40.0%
TAAGAATCTCATTGACCAGC+AGG - Chr1:68034872-68034891 MsG0180003771.01.T01:intron 40.0%
TAATTGTATTCTGCACCTCC+AGG + Chr1:68034018-68034037 None:intergenic 40.0%
TATATTGGGCCCTGTCTATT+GGG + Chr1:68035194-68035213 None:intergenic 40.0%
TCACTCACTGATAGAGAAAG+TGG - Chr1:68033760-68033779 MsG0180003771.01.T01:intron 40.0%
TCTTGATGAGTTCAAGAGCA+GGG - Chr1:68033930-68033949 MsG0180003771.01.T01:intron 40.0%
TGAACTTTCCAACAGATGCT+TGG - Chr1:68034265-68034284 MsG0180003771.01.T01:intron 40.0%
TTCAAAGGCTCTGCTGATAT+TGG - Chr1:68036127-68036146 MsG0180003771.01.T01:CDS 40.0%
TTGAGGCAGTAAAATTCCCA+AGG + Chr1:68034296-68034315 None:intergenic 40.0%
TTGGAAAGTTCAGACTTCCA+TGG + Chr1:68034257-68034276 None:intergenic 40.0%
TTGTCATTCATCCCTAACGA+GGG - Chr1:68032950-68032969 MsG0180003771.01.T01:exon 40.0%
! AAGAAGGGATATCTGAAGCA+GGG + Chr1:68034605-68034624 None:intergenic 40.0%
! AATTTGTTCTCGGATGAGGA+GGG - Chr1:68033283-68033302 MsG0180003771.01.T01:intron 40.0%
! ACTGTTTGCCGTTTCATGAT+TGG + Chr1:68034628-68034647 None:intergenic 40.0%
! ACTGTTTTCCCGTTGAAAAG+TGG + Chr1:68036462-68036481 None:intergenic 40.0%
! CAGCATAGTCTTAGACTTTG+TGG - Chr1:68033417-68033436 MsG0180003771.01.T01:intron 40.0%
! GCAGGTTTCTTTGGAAAACA+AGG - Chr1:68037040-68037059 MsG0180003771.01.T01:CDS 40.0%
! GGTCATTGCTCTAAGTTTAG+TGG - Chr1:68036848-68036867 MsG0180003771.01.T01:intron 40.0%
! TCAAAGGGAGCCAAAGTTTT+AGG - Chr1:68034048-68034067 MsG0180003771.01.T01:intron 40.0%
! TGATAGAACAGTTGACTCCA+GGG - Chr1:68037160-68037179 MsG0180003771.01.T01:CDS 40.0%
! TGCTTTGTTACGGCTATCTT+TGG - Chr1:68037103-68037122 MsG0180003771.01.T01:CDS 40.0%
! TTGATAGAACAGTTGACTCC+AGG - Chr1:68037159-68037178 MsG0180003771.01.T01:CDS 40.0%
!! GGTTAATTTGTTCTCGGATG+AGG - Chr1:68033279-68033298 MsG0180003771.01.T01:intron 40.0%
!! TAATTTGTTCTCGGATGAGG+AGG - Chr1:68033282-68033301 MsG0180003771.01.T01:intron 40.0%
!! TACTGATTCGGCCAATAAAG+AGG - Chr1:68033819-68033838 MsG0180003771.01.T01:intron 40.0%
!!! TTTTTTGTCACTGACCAGTC+GGG + Chr1:68035540-68035559 None:intergenic 40.0%
AAATGATTCGTTGCTCGTGC+AGG - Chr1:68034990-68035009 MsG0180003771.01.T01:intron 45.0%
ACCTCAAAACAGCATTGTCC+TGG + Chr1:68035080-68035099 None:intergenic 45.0%
ACGTAAAGCTCGCATGGAAT+TGG - Chr1:68033045-68033064 MsG0180003771.01.T01:CDS 45.0%
ACTTAGGCCTTAGGCAATGT+AGG + Chr1:68035845-68035864 None:intergenic 45.0%
ACTTTGGGCAGAGGAAGAAA+TGG + Chr1:68033098-68033117 None:intergenic 45.0%
AGAGACTAGGCTCGAATTAG+AGG - Chr1:68035275-68035294 MsG0180003771.01.T01:intron 45.0%
AGGAAAACCCAAGCATCTGT+TGG + Chr1:68034276-68034295 None:intergenic 45.0%
AGTGGTGTTTATGCGCTACT+TGG - Chr1:68033778-68033797 MsG0180003771.01.T01:intron 45.0%
ATACATAGATTGGAGCCTGG+AGG - Chr1:68034000-68034019 MsG0180003771.01.T01:intron 45.0%
ATCTTGAGAACAGTATCCCC+AGG + Chr1:68034699-68034718 None:intergenic 45.0%
ATGTTCACTCTCAGCAGGAT+CGG + Chr1:68034547-68034566 None:intergenic 45.0%
ATTCAGGTCCGAGGTTGAAA+AGG - Chr1:68037007-68037026 MsG0180003771.01.T01:intron 45.0%
CAAATGTGAGGCATGCTCAA+AGG - Chr1:68034313-68034332 MsG0180003771.01.T01:intron 45.0%
CCGATAGAAAGACTAAGGCA+GGG + Chr1:68035502-68035521 None:intergenic 45.0%
CCTTGGGAGCAAAACCAATT+GGG + Chr1:68036432-68036451 None:intergenic 45.0%
CTATATTGGGCCCTGTCTAT+TGG + Chr1:68035195-68035214 None:intergenic 45.0%
CTTGTCATTCATCCCTAACG+AGG - Chr1:68032949-68032968 MsG0180003771.01.T01:exon 45.0%
CTTTGGGCAGAGGAAGAAAT+GGG + Chr1:68033097-68033116 None:intergenic 45.0%
GAAGAAATCCGTCAACCAGT+TGG - Chr1:68034666-68034685 MsG0180003771.01.T01:intron 45.0%
GACTTATAGGCCGATGTTAG+TGG - Chr1:68033258-68033277 MsG0180003771.01.T01:intron 45.0%
GAGAGAAATCTCTCCTCCAA+GGG - Chr1:68036675-68036694 MsG0180003771.01.T01:intron 45.0%
GCAGTTGGATCATATACTCC+AGG - Chr1:68035059-68035078 MsG0180003771.01.T01:intron 45.0%
GCCGTTTCATGATTGGAAGA+AGG + Chr1:68034621-68034640 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + Chr1:68036293-68036312 None:intergenic 45.0%
GGAGACTACAACTGCAACAA+AGG + Chr1:68035785-68035804 None:intergenic 45.0%
GGCACCTTTCCCTTCTTTAT+TGG + Chr1:68034076-68034095 None:intergenic 45.0%
GTCTTGATGAGTTCAAGAGC+AGG - Chr1:68033929-68033948 MsG0180003771.01.T01:intron 45.0%
GTTTCTTTCCATTCCAGGCA+TGG - Chr1:68033232-68033251 MsG0180003771.01.T01:intron 45.0%
TACGCACTATAACATCCTGC+TGG + Chr1:68034890-68034909 None:intergenic 45.0%
TCATCAAAATCGGCAGATGC+TGG + Chr1:68035948-68035967 None:intergenic 45.0%
TCCGATAGAAAGACTAAGGC+AGG + Chr1:68035503-68035522 None:intergenic 45.0%
TCCTTGGGAGCAAAACCAAT+TGG + Chr1:68036433-68036452 None:intergenic 45.0%
TCTTCGAAATCCGTGTTCTG+TGG - Chr1:68034128-68034147 MsG0180003771.01.T01:intron 45.0%
TGAACATGTTCACTCTCAGC+AGG + Chr1:68034552-68034571 None:intergenic 45.0%
TGAGAGAAATCTCTCCTCCA+AGG - Chr1:68036674-68036693 MsG0180003771.01.T01:intron 45.0%
TTGAACTCATCAAGACCGAG+AGG + Chr1:68033925-68033944 None:intergenic 45.0%
TTGAGCATGCCTCACATTTG+AGG + Chr1:68034313-68034332 None:intergenic 45.0%
TTTGGGCAGAGGAAGAAATG+GGG + Chr1:68033096-68033115 None:intergenic 45.0%
! ACAGATGCTTGGGTTTTCCT+TGG - Chr1:68034276-68034295 MsG0180003771.01.T01:intron 45.0%
! AGTCTCCAGCACCATTGTTT+TGG - Chr1:68035798-68035817 MsG0180003771.01.T01:CDS 45.0%
! CAGATGCTTGGGTTTTCCTT+GGG - Chr1:68034277-68034296 MsG0180003771.01.T01:intron 45.0%
! CCCTGCCTTAGTCTTTCTAT+CGG - Chr1:68035499-68035518 MsG0180003771.01.T01:CDS 45.0%
! GAAGAAGGGATATCTGAAGC+AGG + Chr1:68034606-68034625 None:intergenic 45.0%
! GACTCCAGGGAATTTTGTGT+GGG - Chr1:68037173-68037192 MsG0180003771.01.T01:CDS 45.0%
! GTCTCCAGCACCATTGTTTT+GGG - Chr1:68035799-68035818 MsG0180003771.01.T01:CDS 45.0%
! TGACTCCAGGGAATTTTGTG+TGG - Chr1:68037172-68037191 MsG0180003771.01.T01:CDS 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - Chr1:68036328-68036347 MsG0180003771.01.T01:CDS 45.0%
!! AAGTCAGGCACTGATCAATC+TGG - Chr1:68033970-68033989 MsG0180003771.01.T01:intron 45.0%
!! GCTGAGGCTATTGGTTTAGT+TGG - Chr1:68033733-68033752 MsG0180003771.01.T01:intron 45.0%
!! GGTTGACGGATTTCTTCAAC+TGG + Chr1:68034663-68034682 None:intergenic 45.0%
!!! ACCATTGTTTTGGGTGTGAG+GGG - Chr1:68035808-68035827 MsG0180003771.01.T01:CDS 45.0%
!!! CACCATTGTTTTGGGTGTGA+GGG - Chr1:68035807-68035826 MsG0180003771.01.T01:CDS 45.0%
!!! TCCAGGACAATGCTGTTTTG+AGG - Chr1:68035076-68035095 MsG0180003771.01.T01:intron 45.0%
AAATCCGTCAACCAGTTGGC+AGG - Chr1:68034670-68034689 MsG0180003771.01.T01:intron 50.0%
AAGGTCACGAGTTCAAGTCC+TGG + Chr1:68036349-68036368 None:intergenic 50.0%
AAGTCCTACCATGCCTGGAA+TGG + Chr1:68033243-68033262 None:intergenic 50.0%
AGCTTATGGGTCACTCACAC+AGG - Chr1:68033175-68033194 MsG0180003771.01.T01:CDS 50.0%
ATCCTCCAGCATCCTCTCAA+CGG + Chr1:68034451-68034470 None:intergenic 50.0%
ATTCATCCCTAACGAGGGAG+GGG - Chr1:68032955-68032974 MsG0180003771.01.T01:exon 50.0%
CAACTTTACCAGTTGCGCCA+AGG - Chr1:68036384-68036403 MsG0180003771.01.T01:CDS 50.0%
CACACCCAAAACAATGGTGC+TGG + Chr1:68035806-68035825 None:intergenic 50.0%
CATTCATCCCTAACGAGGGA+GGG - Chr1:68032954-68032973 MsG0180003771.01.T01:exon 50.0%
CCAAAGAAACCTGCTTCTCC+CGG + Chr1:68037034-68037053 None:intergenic 50.0%
CCAGGCATGGTAGGACTTAT+AGG - Chr1:68033245-68033264 MsG0180003771.01.T01:intron 50.0%
CCTATAAGTCCTACCATGCC+TGG + Chr1:68033248-68033267 None:intergenic 50.0%
CGGATTTCTTCAACTGGAGC+AGG + Chr1:68034657-68034676 None:intergenic 50.0%
CTCGTGCAGGCAAAATATGC+TGG - Chr1:68035003-68035022 MsG0180003771.01.T01:intron 50.0%
CTTTCCATTCCAGGCATGGT+AGG - Chr1:68033236-68033255 MsG0180003771.01.T01:intron 50.0%
CTTTGTGAAGGGGAAACCCT+TGG + Chr1:68036694-68036713 None:intergenic 50.0%
CTTTGTGGTTCCCAACCAAC+CGG - Chr1:68033432-68033451 MsG0180003771.01.T01:intron 50.0%
GACAAGGAAAAAGGGCAACC+TGG - Chr1:68036226-68036245 MsG0180003771.01.T01:CDS 50.0%
GAGATCACGTAAAGCTCGCA+TGG - Chr1:68033039-68033058 MsG0180003771.01.T01:CDS 50.0%
GCTACCCACACAAAATTCCC+TGG + Chr1:68037180-68037199 None:intergenic 50.0%
GGATCTGAAGAGCTTTCAGC+TGG - Chr1:68033583-68033602 MsG0180003771.01.T01:intron 50.0%
GGTGTTTATGCGCTACTTGG+TGG - Chr1:68033781-68033800 MsG0180003771.01.T01:intron 50.0%
GTACTCCCTCGAAAAACGGA+GGG - Chr1:68036149-68036168 MsG0180003771.01.T01:CDS 50.0%
GTTCTATGCTAAGACCCGAC+TGG - Chr1:68035523-68035542 MsG0180003771.01.T01:CDS 50.0%
TACCAGTTGCGCCAAGGTTA+AGG - Chr1:68036390-68036409 MsG0180003771.01.T01:CDS 50.0%
TCATTCATCCCTAACGAGGG+AGG - Chr1:68032953-68032972 MsG0180003771.01.T01:exon 50.0%
TCCCCTCACACCCAAAACAA+TGG + Chr1:68035812-68035831 None:intergenic 50.0%
TCGAAAAACGGAGGGTTGGA+CGG - Chr1:68036157-68036176 MsG0180003771.01.T01:CDS 50.0%
TCGAAATCCGTGTTCTGTGG+AGG - Chr1:68034131-68034150 MsG0180003771.01.T01:intron 50.0%
TCGGATGAGGAGGGATTTGT+TGG - Chr1:68033292-68033311 MsG0180003771.01.T01:intron 50.0%
TGTTCACTCTCAGCAGGATC+GGG + Chr1:68034546-68034565 None:intergenic 50.0%
TTCCTTAACCTTGGCGCAAC+TGG + Chr1:68036395-68036414 None:intergenic 50.0%
TTTGTGTGGGTAGCTCTTCC+TGG - Chr1:68037186-68037205 MsG0180003771.01.T01:exon 50.0%
! AAGGGATATCTGAAGCAGGG+TGG + Chr1:68034602-68034621 None:intergenic 50.0%
! AGGGATATCTGAAGCAGGGT+GGG + Chr1:68034601-68034620 None:intergenic 50.0%
! TTCACTTGTTGGGCCAGATC+TGG + Chr1:68035606-68035625 None:intergenic 50.0%
!! TCCAACCCTCCGTTTTTCGA+GGG + Chr1:68036157-68036176 None:intergenic 50.0%
!!! CCCAATTGGTTTTGCTCCCA+AGG - Chr1:68036429-68036448 MsG0180003771.01.T01:CDS 50.0%
!!! GCACCATTGTTTTGGGTGTG+AGG - Chr1:68035806-68035825 MsG0180003771.01.T01:CDS 50.0%
AACCAGTTGGCAGGATGCCT+GGG - Chr1:68034679-68034698 MsG0180003771.01.T01:intron 55.0%
AACGTTACCCCTCCCTCGTT+AGG + Chr1:68032965-68032984 None:intergenic 55.0%
ACCCAAATGCCGCACTTAGG+TGG + Chr1:68035760-68035779 None:intergenic 55.0%
ACGTTACCCCTCCCTCGTTA+GGG + Chr1:68032964-68032983 None:intergenic 55.0%
ACTCTCAGCAGGATCGGGAT+GGG + Chr1:68034541-68034560 None:intergenic 55.0%
AGAGGGGACTGCAATTCAGG+CGG + Chr1:68035735-68035754 None:intergenic 55.0%
AGCCACCTAAGTGCGGCATT+TGG - Chr1:68035755-68035774 MsG0180003771.01.T01:CDS 55.0%
CCGGGAGAAGCAGGTTTCTT+TGG - Chr1:68037031-68037050 MsG0180003771.01.T01:CDS 55.0%
GCAACCCAAATGCCGCACTT+AGG + Chr1:68035763-68035782 None:intergenic 55.0%
GCAATCTTCGCCTCACAAGC+CGG + Chr1:68033454-68033473 None:intergenic 55.0%
GCATCCTGCCAACTGGTTGA+CGG + Chr1:68034677-68034696 None:intergenic 55.0%
GCCACCTAAGTGCGGCATTT+GGG - Chr1:68035756-68035775 MsG0180003771.01.T01:CDS 55.0%
GCTAGAGGGGACTGCAATTC+AGG + Chr1:68035738-68035757 None:intergenic 55.0%
GGTACTCCCTCGAAAAACGG+AGG - Chr1:68036148-68036167 MsG0180003771.01.T01:CDS 55.0%
GGTCCGAGGTTGAAAAGGTC+CGG - Chr1:68037012-68037031 MsG0180003771.01.T01:intron 55.0%
GTCCGAGGTTGAAAAGGTCC+GGG - Chr1:68037013-68037032 MsG0180003771.01.T01:intron 55.0%
TCCCTCGAAAAACGGAGGGT+TGG - Chr1:68036153-68036172 MsG0180003771.01.T01:CDS 55.0%
TGAAAAGGTCCGGGAGAAGC+AGG - Chr1:68037022-68037041 MsG0180003771.01.T01:intron 55.0%
TGTGAAGGGGAAACCCTTGG+AGG + Chr1:68036691-68036710 None:intergenic 55.0%
TTATCTCGGGCTGTGCCTCT+CGG - Chr1:68033907-68033926 MsG0180003771.01.T01:intron 55.0%
TTGGTGTGGATGCCGTTGAG+AGG - Chr1:68034436-68034455 MsG0180003771.01.T01:intron 55.0%
! CTCCCGGACCTTTTCAACCT+CGG + Chr1:68037018-68037037 None:intergenic 55.0%
!! CTCTAAAGGTGGAGGTGCTG+AGG - Chr1:68033717-68033736 MsG0180003771.01.T01:intron 55.0%
!! GTCCAACCCTCCGTTTTTCG+AGG + Chr1:68036158-68036177 None:intergenic 55.0%
ACCAGTTGGCAGGATGCCTG+GGG - Chr1:68034680-68034699 MsG0180003771.01.T01:intron 60.0%
ACTGAAGCTCCCGCATACGC+AGG - Chr1:68036252-68036271 MsG0180003771.01.T01:CDS 60.0%
CAACCAGTTGGCAGGATGCC+TGG - Chr1:68034678-68034697 MsG0180003771.01.T01:intron 60.0%
CACTCTCAGCAGGATCGGGA+TGG + Chr1:68034542-68034561 None:intergenic 60.0%
CCCCTCTAGCCACCTAAGTG+CGG - Chr1:68035748-68035767 MsG0180003771.01.T01:CDS 60.0%
CCGCACTTAGGTGGCTAGAG+GGG + Chr1:68035751-68035770 None:intergenic 60.0%
CTCTCAGCAGGATCGGGATG+GGG + Chr1:68034540-68034559 None:intergenic 60.0%
CTGAAGCTCCCGCATACGCA+GGG - Chr1:68036253-68036272 MsG0180003771.01.T01:CDS 60.0%
GCCGCACTTAGGTGGCTAGA+GGG + Chr1:68035752-68035771 None:intergenic 60.0%
GGATGCCGTTGAGAGGATGC+TGG - Chr1:68034443-68034462 MsG0180003771.01.T01:intron 60.0%
TCTTCGCCTCACAAGCCGGT+TGG + Chr1:68033450-68033469 None:intergenic 60.0%
TGCCGCACTTAGGTGGCTAG+AGG + Chr1:68035753-68035772 None:intergenic 60.0%
TGCCGTTGAGAGGATGCTGG+AGG - Chr1:68034446-68034465 MsG0180003771.01.T01:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + Chr1:68036280-68036299 None:intergenic 60.0%
! GCCTCACAAGCCGGTTGGTT+GGG + Chr1:68033445-68033464 None:intergenic 60.0%
!! GGTGGAGGTGCTGAGGCTAT+TGG - Chr1:68033724-68033743 MsG0180003771.01.T01:intron 60.0%
!! TCCCAACCAACCGGCTTGTG+AGG - Chr1:68033441-68033460 MsG0180003771.01.T01:intron 60.0%
CATACGCAGGGTCCGGGAAG+GGG - Chr1:68036265-68036284 MsG0180003771.01.T01:CDS 65.0%
CGCCTCACAAGCCGGTTGGT+TGG + Chr1:68033446-68033465 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG - Chr1:68036278-68036297 MsG0180003771.01.T01:CDS 65.0%
CTTCCCGGACCCTGCGTATG+CGG + Chr1:68036265-68036284 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - Chr1:68036264-68036283 MsG0180003771.01.T01:CDS 65.0%
TCCCCAGGCATCCTGCCAAC+TGG + Chr1:68034684-68034703 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+AGG + Chr1:68036247-68036266 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+GGG + Chr1:68036264-68036283 None:intergenic 65.0%
CGCATACGCAGGGTCCGGGA+AGG - Chr1:68036263-68036282 MsG0180003771.01.T01:CDS 70.0%
CTCCCGCATACGCAGGGTCC+GGG - Chr1:68036259-68036278 MsG0180003771.01.T01:CDS 70.0%
GCTCCCGCATACGCAGGGTC+CGG - Chr1:68036258-68036277 MsG0180003771.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 68032928 68037299 68032928 ID=MsG0180003771.01;Name=MsG0180003771.01
Chr1 mRNA 68032928 68037299 68032928 ID=MsG0180003771.01.T01;Parent=MsG0180003771.01;Name=MsG0180003771.01.T01;_AED=0.28;_eAED=0.28;_QI=106|1|1|1|1|1|4|40|605
Chr1 exon 68032928 68033214 68032928 ID=MsG0180003771.01.T01:exon:5788;Parent=MsG0180003771.01.T01
Chr1 exon 68035130 68035215 68035130 ID=MsG0180003771.01.T01:exon:5787;Parent=MsG0180003771.01.T01
Chr1 exon 68035325 68036646 68035325 ID=MsG0180003771.01.T01:exon:5786;Parent=MsG0180003771.01.T01
Chr1 exon 68037031 68037299 68037031 ID=MsG0180003771.01.T01:exon:5785;Parent=MsG0180003771.01.T01
Chr1 five_prime_UTR 68037194 68037299 68037194 ID=MsG0180003771.01.T01:five_prime_utr;Parent=MsG0180003771.01.T01
Chr1 CDS 68037031 68037193 68037031 ID=MsG0180003771.01.T01:cds;Parent=MsG0180003771.01.T01
Chr1 CDS 68035325 68036646 68035325 ID=MsG0180003771.01.T01:cds;Parent=MsG0180003771.01.T01
Chr1 CDS 68035130 68035215 68035130 ID=MsG0180003771.01.T01:cds;Parent=MsG0180003771.01.T01
Chr1 CDS 68032968 68033214 68032968 ID=MsG0180003771.01.T01:cds;Parent=MsG0180003771.01.T01
Chr1 three_prime_UTR 68032928 68032967 68032928 ID=MsG0180003771.01.T01:three_prime_utr;Parent=MsG0180003771.01.T01
Gene Sequence

>MsG0180003771.01.T01

ATGCTGAGATCACGTAAAGCTCGCATGGAATTGGAAAGAAGACCTTCTCTTCTTCATAACCCCATTTCTTCCTCTGCCCAAAGTTTCCATTTTTACCAACTTTCTCTGCTTTTTGATTTGTGGGTTTTACTCATTCTCTTCAGCTTATGGGTCACTCACACAGATGGATCTGAAGAGCTTTCAGCTGGATTATCAAATTGGAATCAAGTTAACTACGGATTTTGTGAAATATCTGATACTGTTGATAAAAATTGTATTGAAGAAAGTGATGCTTGCGTTCCGTCAGAAGCTTTATTATACTCTAAAGGTGGAGGTGCTGAGGCTATTGGTTTAGTTGGTGAGTCACTCACTGATAGAGAAAGTGGTGTTTATGCGCTACTTGGTGGTTGTAATAAAGAACATACTGATTCGGCCAATAAAGAGGAGCATGTAGTTGAGAGTTCTGAATCTGCTGTCAAACATGAAAATGATGTCAAAAAATCTGATCTCTTATCTCGGGCTGTGCCTCTCGGTCTTGATGAGTTCAAGAGCAGGGCGATCAGTTCTAAAGTTAAGTCAGGCACTGATCAATCTGGAAGTGTAATACATAGATTGGAGCCTGGAGGTGCAGAATACAATTATGCTTCGGCATCAAAGGGAGCCAAAGTTTTAGGTTCCAATAAAGAAGGGAAAGGTGCCTCTAATATCTTAAGCAGGGATAAAGACAAGTATCTTCGAAATCCGTGTTCTGTGGAGGAGAAATTTGTCATCATAGAACTTTCAGAAGAAACCTTGGTAGATACTGTAGAAATAGCTAATTTTGAACATCACTCTTCCAATTTGAAAGACTTTGAAATCCATGGAAGTCTGAACTTTCCAACAGATGCTTGGGTTTTCCTTGGGAATTTTACTGCCTCAAATGTGAGGCATGCTCAAAGGTTTGTTCTTAAAGAGCCAAAATGGGTAAGATACCTAAAGTTGAATCTTCAAAGCCACTATGGTTCCGAATTTTATTGCACACTAAGTGTTGTTGAAGTTTTTGGTGTGGATGCCGTTGAGAGGATGCTGGAGGATTTAATTAGTACTCAAGACAATCTATTTGCATCTGGAGAAGGCAATGATGATAAGAAGATAGTATCACCCCATCCCGATCCTGCTGAGAGTGAACATGTTCAGCAAAACACTTTTGAGGGGATGAATTCCCACCCTGCTTCAGATATCCCTTCTTCCAATCATGAAACGGCAAACAGTAATGTTCCTGCTCCAGTTGAAGAAATCCGTCAACCAGTTGGCAGGATGCCTGGGGATACTGTTCTCAAGATTCTAATGCAGAAAGTCCGTACTCTAGACCTAAATTTAATTGTTTTGGAGCGGTATATGGAAGACCTAAACTCCAGATATGTCAATATTTTCAAAGAGTACAGCAAAGACATAGAAGAAACAGATGTAGTTCTTCAGAAGATTAAAGAAGGCATTAAGAATCTCATTGACCAGCAGGATGTTATAGCAAAATATGCTGGTGATCTCAATTCTTGGAAGTCTCAAGTTTCTTTGCAGTTGGATCATATACTCCAGGACAATGCTGTTTTGAGGTCCGAGGTTGAAAAGGTCCGGGAGAAGCAGGTTTCTTTGGAAAACAAGGGTGTGATTGTGTTTCTATTATGTTGTATTTTTTCATTGATTGCTTTGTTACGGCTATCTTTGGATATGGCTAAGAATGTTTATAGAGCACTTAGTGTTGATAGAACAGTTGACTCCAGGGAATTTTGTGTGGGTAGCTCTTCCTGGTTTCTTCTATTATTGAGTTGTATCATTATCATTTTCATATTAACCTTTTGA
Protein sequence

>MsG0180003771.01.T01

MLRSRKARMELERRPSLLHNPISSSAQSFHFYQLSLLFDLWVLLILFSLWVTHTDGSEELSAGLSNWNQVNYGFCEISDTVDKNCIEESDACVPSEALLYSKGGGAEAIGLVGESLTDRESGVYALLGGCNKEHTDSANKEEHVVESSESAVKHENDVKKSDLLSRAVPLGLDEFKSRAISSKVKSGTDQSGSVIHRLEPGGAEYNYASASKGAKVLGSNKEGKGASNILSRDKDKYLRNPCSVEEKFVIIELSEETLVDTVEIANFEHHSSNLKDFEIHGSLNFPTDAWVFLGNFTASNVRHAQRFVLKEPKWVRYLKLNLQSHYGSEFYCTLSVVEVFGVDAVERMLEDLISTQDNLFASGEGNDDKKIVSPHPDPAESEHVQQNTFEGMNSHPASDIPSSNHETANSNVPAPVEEIRQPVGRMPGDTVLKILMQKVRTLDLNLIVLERYMEDLNSRYVNIFKEYSKDIEETDVVLQKIKEGIKNLIDQQDVIAKYAGDLNSWKSQVSLQLDHILQDNAVLRSEVEKVREKQVSLENKGVIVFLLCCIFSLIALLRLSLDMAKNVYRALSVDRTVDSREFCVGSSSWFLLLLSCIIIIFILTF*