Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004007.01.T01 | XP_024636095.1 | 98.459 | 584 | 8 | 1 | 1 | 584 | 1 | 583 | 0 | 1202 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004007.01.T01 | O60508 | 47.782 | 586 | 248 | 10 | 15 | 584 | 35 | 578 | 0 | 534 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004007.01.T01 | A0A396JPJ6 | 98.459 | 584 | 8 | 1 | 1 | 584 | 1 | 583 | 0.0 | 1202 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180004007.01 | MsG0780040600.01 | 0.811376 | 7.220730e-51 | 4.462413e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004007.01.T01 | MTR_4g102520 | 97.436 | 585 | 13 | 2 | 1 | 584 | 1 | 584 | 0.0 | 1192 |
MsG0180004007.01.T01 | MTR_1g072740 | 98.318 | 535 | 8 | 1 | 1 | 535 | 1 | 534 | 0.0 | 1090 |
MsG0180004007.01.T01 | MTR_8g467040 | 33.226 | 310 | 193 | 4 | 282 | 581 | 107 | 412 | 2.07e-51 | 182 |
MsG0180004007.01.T01 | MTR_4g119620 | 27.964 | 329 | 210 | 10 | 270 | 584 | 6 | 321 | 2.71e-33 | 130 |
MsG0180004007.01.T01 | MTR_1g072140 | 25.325 | 308 | 217 | 8 | 281 | 584 | 14 | 312 | 1.56e-29 | 119 |
MsG0180004007.01.T01 | MTR_7g086360 | 26.730 | 318 | 220 | 9 | 268 | 581 | 32 | 340 | 2.96e-26 | 110 |
MsG0180004007.01.T01 | MTR_8g092620 | 27.687 | 307 | 203 | 10 | 282 | 584 | 6 | 297 | 1.53e-24 | 104 |
MsG0180004007.01.T01 | MTR_8g092620 | 24.514 | 257 | 147 | 8 | 283 | 496 | 47 | 299 | 2.05e-12 | 68.6 |
MsG0180004007.01.T01 | MTR_4g104380 | 25.962 | 312 | 206 | 8 | 282 | 584 | 218 | 513 | 3.15e-24 | 107 |
MsG0180004007.01.T01 | MTR_4g104380 | 33.019 | 106 | 65 | 3 | 273 | 374 | 289 | 392 | 7.98e-12 | 68.2 |
MsG0180004007.01.T01 | MTR_3g075400 | 26.471 | 306 | 214 | 8 | 281 | 584 | 212 | 508 | 3.76e-23 | 103 |
MsG0180004007.01.T01 | MTR_8g092620 | 27.541 | 305 | 202 | 10 | 282 | 582 | 13 | 302 | 3.84e-23 | 101 |
MsG0180004007.01.T01 | MTR_2g436510 | 26.299 | 308 | 195 | 12 | 291 | 584 | 167 | 456 | 3.61e-19 | 91.3 |
MsG0180004007.01.T01 | MTR_7g076230 | 26.132 | 287 | 188 | 9 | 292 | 560 | 367 | 647 | 5.99e-19 | 91.7 |
MsG0180004007.01.T01 | MTR_8g092620 | 28.037 | 214 | 139 | 8 | 282 | 491 | 6 | 208 | 1.61e-16 | 79.3 |
MsG0180004007.01.T01 | MTR_6g004040 | 29.825 | 171 | 111 | 6 | 285 | 453 | 92 | 255 | 1.64e-16 | 83.6 |
MsG0180004007.01.T01 | MTR_6g004040 | 23.264 | 288 | 197 | 10 | 290 | 565 | 12 | 287 | 1.74e-14 | 77.0 |
MsG0180004007.01.T01 | MTR_6g004040 | 24.868 | 189 | 135 | 4 | 396 | 584 | 31 | 212 | 3.65e-13 | 73.2 |
MsG0180004007.01.T01 | MTR_6g004040 | 31.538 | 130 | 80 | 4 | 284 | 410 | 133 | 256 | 2.28e-11 | 67.4 |
MsG0180004007.01.T01 | MTR_1g069345 | 24.691 | 324 | 227 | 11 | 267 | 584 | 191 | 503 | 8.33e-16 | 80.9 |
MsG0180004007.01.T01 | MTR_2g012630 | 29.545 | 176 | 114 | 7 | 285 | 458 | 91 | 258 | 1.80e-15 | 80.5 |
MsG0180004007.01.T01 | MTR_2g012630 | 23.737 | 198 | 144 | 4 | 387 | 584 | 21 | 211 | 3.71e-13 | 73.2 |
MsG0180004007.01.T01 | MTR_2g012630 | 22.867 | 293 | 198 | 10 | 287 | 565 | 8 | 286 | 1.65e-12 | 71.2 |
MsG0180004007.01.T01 | MTR_2g012630 | 29.545 | 176 | 114 | 7 | 285 | 458 | 91 | 258 | 1.84e-15 | 80.5 |
MsG0180004007.01.T01 | MTR_2g012630 | 23.737 | 198 | 144 | 4 | 387 | 584 | 21 | 211 | 4.69e-13 | 72.8 |
MsG0180004007.01.T01 | MTR_2g012630 | 22.867 | 293 | 198 | 10 | 287 | 565 | 8 | 286 | 1.80e-12 | 70.9 |
MsG0180004007.01.T01 | MTR_1g054300 | 23.622 | 381 | 201 | 11 | 285 | 584 | 110 | 481 | 2.34e-15 | 79.3 |
MsG0180004007.01.T01 | MTR_1g097140 | 25.329 | 304 | 204 | 14 | 287 | 584 | 73 | 359 | 3.56e-15 | 78.2 |
MsG0180004007.01.T01 | MTR_5g090420 | 21.338 | 314 | 234 | 8 | 276 | 584 | 243 | 548 | 2.36e-14 | 76.6 |
MsG0180004007.01.T01 | MTR_3g052220 | 23.824 | 319 | 217 | 11 | 283 | 584 | 202 | 511 | 2.62e-14 | 76.3 |
MsG0180004007.01.T01 | MTR_3g116500 | 24.127 | 315 | 215 | 10 | 289 | 584 | 60 | 369 | 2.41e-13 | 72.4 |
MsG0180004007.01.T01 | MTR_3g116500 | 26.222 | 225 | 150 | 7 | 373 | 584 | 38 | 259 | 8.78e-13 | 69.3 |
MsG0180004007.01.T01 | MTR_8g106790 | 23.022 | 278 | 183 | 12 | 282 | 539 | 54 | 320 | 1.49e-12 | 69.3 |
MsG0180004007.01.T01 | MTR_2g060520 | 21.429 | 322 | 228 | 8 | 283 | 584 | 115 | 431 | 6.53e-12 | 68.2 |
MsG0180004007.01.T01 | MTR_4g123597 | 22.812 | 320 | 212 | 14 | 285 | 584 | 347 | 651 | 7.60e-12 | 68.9 |
MsG0180004007.01.T01 | MTR_4g105700 | 21.639 | 305 | 212 | 11 | 298 | 584 | 316 | 611 | 9.52e-12 | 68.6 |
MsG0180004007.01.T01 | MTR_1g034785 | 24.339 | 189 | 117 | 5 | 285 | 451 | 109 | 293 | 5.31e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180004007.01.T01 | AT1G10580 | 77.607 | 585 | 117 | 4 | 1 | 584 | 1 | 572 | 0.0 | 936 |
MsG0180004007.01.T01 | AT5G54520 | 32.915 | 319 | 204 | 3 | 274 | 584 | 140 | 456 | 1.12e-54 | 192 |
MsG0180004007.01.T01 | AT3G49660 | 25.321 | 312 | 215 | 9 | 281 | 584 | 11 | 312 | 2.50e-29 | 119 |
MsG0180004007.01.T01 | AT3G49660 | 28.767 | 219 | 145 | 6 | 286 | 499 | 105 | 317 | 2.19e-25 | 107 |
MsG0180004007.01.T01 | AT5G64730 | 27.508 | 309 | 201 | 11 | 282 | 584 | 6 | 297 | 8.20e-27 | 111 |
MsG0180004007.01.T01 | AT4G15900 | 29.967 | 307 | 183 | 12 | 292 | 584 | 174 | 462 | 4.46e-26 | 112 |
MsG0180004007.01.T01 | AT2G43770 | 26.460 | 291 | 206 | 7 | 291 | 578 | 50 | 335 | 1.31e-25 | 108 |
MsG0180004007.01.T01 | AT4G02730 | 24.759 | 311 | 216 | 10 | 281 | 584 | 30 | 329 | 1.45e-24 | 105 |
MsG0180004007.01.T01 | AT3G16650 | 28.990 | 307 | 185 | 13 | 292 | 584 | 168 | 455 | 6.27e-22 | 99.8 |
MsG0180004007.01.T01 | AT5G50230 | 24.407 | 295 | 199 | 7 | 282 | 567 | 213 | 492 | 1.16e-19 | 92.8 |
MsG0180004007.01.T01 | AT5G23430 | 23.256 | 301 | 200 | 12 | 287 | 578 | 9 | 287 | 1.45e-17 | 87.0 |
MsG0180004007.01.T01 | AT5G23430 | 30.000 | 150 | 97 | 5 | 285 | 432 | 92 | 235 | 1.32e-14 | 77.8 |
MsG0180004007.01.T01 | AT5G23430 | 25.000 | 192 | 131 | 4 | 396 | 584 | 31 | 212 | 4.75e-13 | 72.8 |
MsG0180004007.01.T01 | AT5G23430 | 29.921 | 127 | 86 | 3 | 284 | 410 | 133 | 256 | 3.06e-11 | 67.0 |
MsG0180004007.01.T01 | AT5G23430 | 23.256 | 301 | 200 | 12 | 287 | 578 | 9 | 287 | 1.46e-17 | 87.0 |
MsG0180004007.01.T01 | AT5G23430 | 30.000 | 150 | 97 | 5 | 285 | 432 | 92 | 235 | 1.31e-14 | 77.8 |
MsG0180004007.01.T01 | AT5G23430 | 25.000 | 192 | 131 | 4 | 396 | 584 | 31 | 212 | 4.55e-13 | 72.8 |
MsG0180004007.01.T01 | AT5G23430 | 29.921 | 127 | 86 | 3 | 284 | 410 | 133 | 256 | 2.98e-11 | 67.0 |
MsG0180004007.01.T01 | AT5G23430 | 23.256 | 301 | 200 | 12 | 287 | 578 | 9 | 287 | 1.46e-17 | 87.0 |
MsG0180004007.01.T01 | AT5G23430 | 30.000 | 150 | 97 | 5 | 285 | 432 | 92 | 235 | 1.31e-14 | 77.8 |
MsG0180004007.01.T01 | AT5G23430 | 25.000 | 192 | 131 | 4 | 396 | 584 | 31 | 212 | 4.55e-13 | 72.8 |
MsG0180004007.01.T01 | AT5G23430 | 29.921 | 127 | 86 | 3 | 284 | 410 | 133 | 256 | 2.98e-11 | 67.0 |
MsG0180004007.01.T01 | AT5G08560 | 23.453 | 307 | 222 | 8 | 282 | 584 | 262 | 559 | 1.66e-17 | 86.7 |
MsG0180004007.01.T01 | AT5G08560 | 23.453 | 307 | 222 | 8 | 282 | 584 | 262 | 559 | 1.66e-17 | 86.7 |
MsG0180004007.01.T01 | AT5G08560 | 23.453 | 307 | 222 | 8 | 282 | 584 | 262 | 559 | 1.66e-17 | 86.7 |
MsG0180004007.01.T01 | AT5G08390 | 23.913 | 276 | 192 | 9 | 287 | 561 | 9 | 267 | 2.70e-17 | 86.3 |
MsG0180004007.01.T01 | AT5G08390 | 32.000 | 150 | 94 | 5 | 285 | 432 | 92 | 235 | 1.78e-15 | 80.5 |
MsG0180004007.01.T01 | AT5G08390 | 25.000 | 192 | 131 | 4 | 396 | 584 | 31 | 212 | 3.14e-13 | 73.2 |
MsG0180004007.01.T01 | AT5G08390 | 32.283 | 127 | 83 | 3 | 284 | 410 | 133 | 256 | 1.73e-12 | 70.9 |
MsG0180004007.01.T01 | AT1G61210 | 31.429 | 175 | 112 | 6 | 285 | 458 | 91 | 258 | 7.12e-17 | 85.1 |
MsG0180004007.01.T01 | AT1G61210 | 25.085 | 295 | 190 | 11 | 292 | 577 | 13 | 285 | 7.08e-16 | 82.0 |
MsG0180004007.01.T01 | AT1G61210 | 23.810 | 189 | 137 | 4 | 396 | 584 | 30 | 211 | 1.29e-11 | 68.2 |
MsG0180004007.01.T01 | AT1G61210 | 31.008 | 129 | 82 | 5 | 284 | 410 | 132 | 255 | 1.31e-11 | 68.2 |
MsG0180004007.01.T01 | AT1G61210 | 31.429 | 175 | 112 | 6 | 285 | 458 | 91 | 258 | 9.68e-17 | 84.7 |
MsG0180004007.01.T01 | AT1G61210 | 25.714 | 280 | 182 | 10 | 292 | 567 | 13 | 270 | 1.16e-15 | 81.3 |
MsG0180004007.01.T01 | AT1G61210 | 31.008 | 129 | 82 | 5 | 284 | 410 | 132 | 255 | 1.58e-11 | 68.2 |
MsG0180004007.01.T01 | AT1G61210 | 23.810 | 189 | 137 | 4 | 396 | 584 | 30 | 211 | 1.64e-11 | 68.2 |
MsG0180004007.01.T01 | AT1G61210 | 31.429 | 175 | 112 | 6 | 285 | 458 | 91 | 258 | 1.00e-16 | 84.7 |
MsG0180004007.01.T01 | AT1G61210 | 25.714 | 280 | 182 | 10 | 292 | 567 | 13 | 270 | 1.26e-15 | 81.3 |
MsG0180004007.01.T01 | AT1G61210 | 23.810 | 189 | 137 | 4 | 396 | 584 | 30 | 211 | 1.48e-11 | 68.2 |
MsG0180004007.01.T01 | AT1G61210 | 31.008 | 129 | 82 | 5 | 284 | 410 | 132 | 255 | 1.65e-11 | 68.2 |
MsG0180004007.01.T01 | AT1G15440 | 26.457 | 223 | 156 | 5 | 292 | 510 | 347 | 565 | 1.52e-16 | 84.0 |
MsG0180004007.01.T01 | AT1G15440 | 26.457 | 223 | 156 | 5 | 292 | 510 | 387 | 605 | 1.99e-16 | 83.6 |
MsG0180004007.01.T01 | AT5G43920 | 24.688 | 320 | 218 | 12 | 278 | 584 | 204 | 513 | 3.21e-16 | 82.4 |
MsG0180004007.01.T01 | AT1G11160 | 24.742 | 291 | 195 | 9 | 287 | 565 | 8 | 286 | 6.02e-16 | 82.0 |
MsG0180004007.01.T01 | AT1G11160 | 27.684 | 177 | 120 | 6 | 285 | 460 | 91 | 260 | 6.57e-15 | 79.0 |
MsG0180004007.01.T01 | AT1G11160 | 25.397 | 189 | 134 | 4 | 396 | 584 | 30 | 211 | 1.35e-14 | 77.8 |
MsG0180004007.01.T01 | AT1G11160 | 30.534 | 131 | 80 | 6 | 284 | 410 | 132 | 255 | 5.94e-11 | 66.2 |
MsG0180004007.01.T01 | AT1G11160 | 24.742 | 291 | 195 | 9 | 287 | 565 | 8 | 286 | 6.12e-16 | 82.0 |
MsG0180004007.01.T01 | AT1G11160 | 27.684 | 177 | 120 | 6 | 285 | 460 | 91 | 260 | 6.34e-15 | 79.0 |
MsG0180004007.01.T01 | AT1G11160 | 25.397 | 189 | 134 | 4 | 396 | 584 | 30 | 211 | 1.35e-14 | 77.8 |
MsG0180004007.01.T01 | AT1G11160 | 30.534 | 131 | 80 | 6 | 284 | 410 | 132 | 255 | 5.63e-11 | 66.2 |
MsG0180004007.01.T01 | AT1G11160 | 24.742 | 291 | 195 | 9 | 287 | 565 | 8 | 286 | 6.23e-16 | 82.0 |
MsG0180004007.01.T01 | AT1G11160 | 27.684 | 177 | 120 | 6 | 285 | 460 | 91 | 260 | 7.04e-15 | 78.6 |
MsG0180004007.01.T01 | AT1G11160 | 25.397 | 189 | 134 | 4 | 396 | 584 | 30 | 211 | 1.26e-14 | 77.8 |
MsG0180004007.01.T01 | AT1G11160 | 30.534 | 131 | 80 | 6 | 284 | 410 | 132 | 255 | 6.04e-11 | 66.2 |
MsG0180004007.01.T01 | AT1G11160 | 27.684 | 177 | 120 | 6 | 285 | 460 | 49 | 218 | 6.06e-15 | 79.0 |
MsG0180004007.01.T01 | AT1G11160 | 25.749 | 167 | 117 | 4 | 418 | 584 | 10 | 169 | 1.40e-12 | 71.2 |
MsG0180004007.01.T01 | AT1G11160 | 24.803 | 254 | 168 | 8 | 324 | 565 | 2 | 244 | 1.22e-11 | 68.2 |
MsG0180004007.01.T01 | AT1G11160 | 30.534 | 131 | 80 | 6 | 284 | 410 | 90 | 213 | 5.41e-11 | 66.2 |
MsG0180004007.01.T01 | AT3G18130 | 24.907 | 269 | 175 | 11 | 291 | 539 | 60 | 321 | 6.37e-14 | 73.6 |
MsG0180004007.01.T01 | AT3G18130 | 24.907 | 269 | 184 | 9 | 293 | 553 | 14 | 272 | 1.37e-11 | 66.6 |
MsG0180004007.01.T01 | AT5G52820 | 25.000 | 300 | 200 | 11 | 291 | 584 | 191 | 471 | 2.75e-13 | 72.8 |
MsG0180004007.01.T01 | AT2G33340 | 25.591 | 254 | 173 | 9 | 285 | 532 | 255 | 498 | 6.47e-13 | 72.0 |
MsG0180004007.01.T01 | AT2G33340 | 25.591 | 254 | 173 | 9 | 285 | 532 | 255 | 498 | 6.47e-13 | 72.0 |
MsG0180004007.01.T01 | AT1G48630 | 24.907 | 269 | 177 | 11 | 291 | 541 | 60 | 321 | 7.17e-13 | 70.5 |
MsG0180004007.01.T01 | AT1G48630 | 24.542 | 273 | 188 | 9 | 289 | 553 | 10 | 272 | 7.44e-12 | 67.4 |
MsG0180004007.01.T01 | AT5G16750 | 25.444 | 169 | 118 | 5 | 289 | 452 | 55 | 220 | 9.30e-13 | 72.0 |
MsG0180004007.01.T01 | AT2G41500 | 23.228 | 254 | 179 | 7 | 335 | 584 | 252 | 493 | 1.25e-12 | 70.9 |
MsG0180004007.01.T01 | AT2G41500 | 25.472 | 212 | 152 | 6 | 286 | 496 | 331 | 537 | 4.04e-12 | 69.3 |
MsG0180004007.01.T01 | AT2G41500 | 23.228 | 254 | 179 | 7 | 335 | 584 | 252 | 493 | 1.25e-12 | 70.9 |
MsG0180004007.01.T01 | AT2G41500 | 25.472 | 212 | 152 | 6 | 286 | 496 | 331 | 537 | 4.04e-12 | 69.3 |
MsG0180004007.01.T01 | AT1G73720 | 24.451 | 319 | 214 | 12 | 283 | 584 | 201 | 509 | 3.75e-12 | 69.3 |
MsG0180004007.01.T01 | AT3G21540 | 23.864 | 264 | 174 | 12 | 334 | 584 | 402 | 651 | 9.42e-12 | 68.6 |
MsG0180004007.01.T01 | AT3G21540 | 27.094 | 203 | 134 | 8 | 303 | 498 | 26 | 221 | 5.85e-11 | 66.2 |
MsG0180004007.01.T01 | AT1G79990 | 22.460 | 187 | 141 | 3 | 310 | 494 | 72 | 256 | 1.62e-11 | 67.8 |
MsG0180004007.01.T01 | AT2G33340 | 27.011 | 174 | 117 | 6 | 285 | 453 | 255 | 423 | 1.65e-11 | 67.4 |
MsG0180004007.01.T01 | AT1G18080 | 23.420 | 269 | 182 | 9 | 291 | 541 | 60 | 322 | 1.79e-11 | 66.2 |
MsG0180004007.01.T01 | AT1G18080 | 22.695 | 282 | 161 | 7 | 289 | 562 | 10 | 242 | 2.05e-11 | 65.9 |
MsG0180004007.01.T01 | AT1G79990 | 22.460 | 187 | 141 | 3 | 310 | 494 | 72 | 256 | 2.10e-11 | 67.4 |
MsG0180004007.01.T01 | AT5G60940 | 23.125 | 320 | 224 | 9 | 282 | 584 | 111 | 425 | 3.63e-11 | 65.9 |
MsG0180004007.01.T01 | AT5G60940 | 23.125 | 320 | 224 | 9 | 282 | 584 | 19 | 333 | 5.86e-11 | 64.7 |
MsG0180004007.01.T01 | AT5G67320 | 23.464 | 358 | 202 | 14 | 281 | 575 | 252 | 600 | 6.03e-11 | 65.9 |
Find 156 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGATACTAAGGTTAAAATT+TGG | 0.172435 | 1:+71709086 | MsG0180004007.01.T01:CDS |
GATGGGTTTGGAGAGGGTTT+TGG | 0.192541 | 1:-71708300 | None:intergenic |
GTGAGGGTAAGTGTTGGTTC+TGG | 0.241552 | 1:+71709743 | MsG0180004007.01.T01:CDS |
AGAATCAAATGACCCGAATT+TGG | 0.271905 | 1:-71709052 | None:intergenic |
ATCGAAATCACCGACGTAAT+TGG | 0.272574 | 1:-71708540 | None:intergenic |
ACATTCTGTTTATCCTCATC+TGG | 0.288775 | 1:-71709307 | None:intergenic |
GGATACTAAGGTTAAAATTT+GGG | 0.302166 | 1:+71709087 | MsG0180004007.01.T01:CDS |
AGCATGGTATCGTCGACTTT+GGG | 0.305375 | 1:-71708257 | None:intergenic |
CAAGAGTATGATCAGCATTT+GGG | 0.309524 | 1:+71709394 | MsG0180004007.01.T01:CDS |
GAAATGTATGAGGACTTATA+TGG | 0.321943 | 1:+71709126 | MsG0180004007.01.T01:CDS |
TTGAGTTGGGTCGATGGGTT+TGG | 0.324589 | 1:-71708312 | None:intergenic |
TCCCTCAGGGTATGGGAATA+TGG | 0.330247 | 1:+71709481 | MsG0180004007.01.T01:CDS |
TTGGCTCGCCGCTCAGAGTT+TGG | 0.331077 | 1:+71709582 | MsG0180004007.01.T01:CDS |
CGAAAGGTGTTTCCGCGATT+AGG | 0.337658 | 1:+71709023 | MsG0180004007.01.T01:CDS |
TGATAAGAATATTAAGTATT+GGG | 0.340716 | 1:+71709216 | MsG0180004007.01.T01:CDS |
GTTCAGTGGGATATGAATAC+TGG | 0.343180 | 1:+71709361 | MsG0180004007.01.T01:CDS |
CAGCTCTGGGCCCCGATTCA+AGG | 0.351014 | 1:+71708365 | MsG0180004007.01.T01:CDS |
TGAGGGTAAGTGTTGGTTCT+GGG | 0.355149 | 1:+71709744 | MsG0180004007.01.T01:CDS |
CGTTGTTGTCGTCGGTGTAT+TGG | 0.360399 | 1:-71708157 | None:intergenic |
TGGGTCATTCAAAAGCTGTT+AGG | 0.360518 | 1:+71709146 | MsG0180004007.01.T01:CDS |
TCAAGAGTATGATCAGCATT+TGG | 0.367145 | 1:+71709393 | MsG0180004007.01.T01:CDS |
CGAAGAGATTGGTTCATACT+TGG | 0.367310 | 1:+71708990 | MsG0180004007.01.T01:CDS |
GCGGCGAGCCAATTGGCATT+GGG | 0.372981 | 1:-71709571 | None:intergenic |
AACAACCATGCCTCAGAAGC+TGG | 0.373950 | 1:-71708716 | None:intergenic |
TTTGCTGGACATATTGTTGC+TGG | 0.377860 | 1:+71709664 | MsG0180004007.01.T01:CDS |
GGTGAGATGGGCCTTGAATC+GGG | 0.381007 | 1:-71708376 | None:intergenic |
CGATATAACCTGCCCCGTTT+CGG | 0.387388 | 1:-71709242 | None:intergenic |
AAAGATAAGAGTACCTTTCA+TGG | 0.388138 | 1:+71708884 | MsG0180004007.01.T01:CDS |
TTGTGCTATAAATAAGTATC+TGG | 0.390504 | 1:-71709609 | None:intergenic |
ACCCTACCTACGACCAGCTC+TGG | 0.397227 | 1:+71708351 | MsG0180004007.01.T01:CDS |
CACTTCACCCCAATGCCAAT+TGG | 0.397316 | 1:+71709563 | MsG0180004007.01.T01:CDS |
TTACTCGCTTTAGCATCTTT+CGG | 0.399207 | 1:-71708950 | None:intergenic |
GGGATTATCAAGGTAGGTCT+TGG | 0.401179 | 1:+71708918 | MsG0180004007.01.T01:CDS |
TTTGGGGTCGGCGACGGTTA+GGG | 0.403402 | 1:-71708282 | None:intergenic |
GTAAGTGTTGGTTCTGGGAT+TGG | 0.407813 | 1:+71709749 | MsG0180004007.01.T01:CDS |
CTTGAATCGGGGCCCAGAGC+TGG | 0.409734 | 1:-71708364 | None:intergenic |
GCAAAGTAGCGACGTGTGGC+TGG | 0.411956 | 1:+71709851 | MsG0180004007.01.T01:CDS |
GAGCATGGTATCGTCGACTT+TGG | 0.418651 | 1:-71708258 | None:intergenic |
AGCGGCGAGCCAATTGGCAT+TGG | 0.418827 | 1:-71709572 | None:intergenic |
GGGTGAGATGGGCCTTGAAT+CGG | 0.419829 | 1:-71708377 | None:intergenic |
ATGATAAGAATATTAAGTAT+TGG | 0.420715 | 1:+71709215 | MsG0180004007.01.T01:CDS |
TCTTCTTCTGTTCACGGTGT+GGG | 0.426132 | 1:-71708601 | None:intergenic |
GAACGGGAAGGGAGGAGACG+AGG | 0.429345 | 1:-71708227 | None:intergenic |
AAGTATTGGGATACCGAAAC+GGG | 0.432545 | 1:+71709229 | MsG0180004007.01.T01:CDS |
ATGACAAGTCCCTCAGGGTA+TGG | 0.434880 | 1:+71709473 | MsG0180004007.01.T01:CDS |
GAGTCCTTGGGCTGGGAAGA+AGG | 0.437077 | 1:+71708751 | MsG0180004007.01.T01:CDS |
CTCTTCTTCTGTTCACGGTG+TGG | 0.437638 | 1:-71708602 | None:intergenic |
CTTCGACGAAACCGAGTTTG+TGG | 0.444127 | 1:-71708436 | None:intergenic |
GCCCAGAGCTGGTCGTAGGT+AGG | 0.447192 | 1:-71708353 | None:intergenic |
TTCGGGTCATTTGATTCTCT+CGG | 0.449795 | 1:+71709057 | MsG0180004007.01.T01:CDS |
GGGTTAAGCTTCACAACATA+AGG | 0.453310 | 1:-71709286 | None:intergenic |
TGAAGAATAAGAAGAGTCCT+TGG | 0.458759 | 1:+71708738 | MsG0180004007.01.T01:CDS |
TGGGTCGATGGGTTTGGAGA+GGG | 0.461924 | 1:-71708306 | None:intergenic |
TTGTTATATACCGAAGAGAT+TGG | 0.463597 | 1:+71708979 | MsG0180004007.01.T01:CDS |
TGGTTGCGAGTGGCATCCTC+TGG | 0.463609 | 1:+71709822 | MsG0180004007.01.T01:CDS |
GGGCGGCGGAACGGGAAGGG+AGG | 0.465040 | 1:-71708235 | None:intergenic |
GGCATTGGGGTGAAGTGAAA+TGG | 0.465903 | 1:-71709557 | None:intergenic |
TAGCGACGTGTGGCTGGGAC+GGG | 0.469608 | 1:+71709857 | MsG0180004007.01.T01:CDS |
CCTTTCCTCTTTCCCATGAA+AGG | 0.470308 | 1:-71708897 | None:intergenic |
GGGTCATTCAAAAGCTGTTA+GGG | 0.470465 | 1:+71709147 | MsG0180004007.01.T01:CDS |
AGGTGTTGAGTTGGGTCGAT+GGG | 0.471106 | 1:-71708317 | None:intergenic |
CCCAGAGCTGGTCGTAGGTA+GGG | 0.477469 | 1:-71708352 | None:intergenic |
CTGATATACTTTATAACTAC+AGG | 0.479452 | 1:-71709508 | None:intergenic |
TCAATACTGGGAAATGTATG+AGG | 0.483897 | 1:+71709116 | MsG0180004007.01.T01:CDS |
TGTTGCTGGATATGCTTGTC+AGG | 0.489525 | 1:+71709678 | MsG0180004007.01.T01:CDS |
CCAGTGATGACAAGTCCCTC+AGG | 0.489956 | 1:+71709467 | MsG0180004007.01.T01:CDS |
CTCGGCTGGTATGGATACTA+AGG | 0.491505 | 1:+71709075 | MsG0180004007.01.T01:CDS |
AGGCGATAAGGTGTTGAGTT+GGG | 0.492099 | 1:-71708325 | None:intergenic |
TTTGATTCTCTCGGCTGGTA+TGG | 0.492749 | 1:+71709066 | MsG0180004007.01.T01:CDS |
CTTTCATGGGAAAGAGGAAA+GGG | 0.500065 | 1:+71708898 | MsG0180004007.01.T01:CDS |
GGTCATTTGATTCTCTCGGC+TGG | 0.501830 | 1:+71709061 | MsG0180004007.01.T01:CDS |
CATTCTGTTTATCCTCATCT+GGG | 0.502022 | 1:-71709306 | None:intergenic |
CCCTACCTACGACCAGCTCT+GGG | 0.505645 | 1:+71708352 | MsG0180004007.01.T01:CDS |
CAAGTATGAACCAATCTCTT+CGG | 0.512443 | 1:-71708989 | None:intergenic |
GCTAAACCGTCTTTAGCGTA+AGG | 0.513178 | 1:-71708398 | None:intergenic |
ACTCTGAGCGGCGAGCCAAT+TGG | 0.513719 | 1:-71709578 | None:intergenic |
TAAGTATTGGGATACCGAAA+CGG | 0.518461 | 1:+71709228 | MsG0180004007.01.T01:CDS |
ATCTCAAAACCCTAATTCAC+CGG | 0.519645 | 1:+71708193 | MsG0180004007.01.T01:CDS |
CAAAGTAGCGACGTGTGGCT+GGG | 0.520964 | 1:+71709852 | MsG0180004007.01.T01:CDS |
AGGTAGGGTTGAAGGCGATA+AGG | 0.521290 | 1:-71708337 | None:intergenic |
TTGGGATACCGAAACGGGGC+AGG | 0.523429 | 1:+71709234 | MsG0180004007.01.T01:CDS |
GTAGCGACGTGTGGCTGGGA+CGG | 0.525013 | 1:+71709856 | MsG0180004007.01.T01:CDS |
GTTATATCGACTTTCTCCAC+TGG | 0.528482 | 1:+71709256 | MsG0180004007.01.T01:CDS |
TCTTTAGCGTAAGGGTGAGA+TGG | 0.528553 | 1:-71708389 | None:intergenic |
AAATGTATGAGGACTTATAT+GGG | 0.528951 | 1:+71709127 | MsG0180004007.01.T01:CDS |
GATTGAAAACCCAGCTTCTG+AGG | 0.529050 | 1:+71708706 | MsG0180004007.01.T01:CDS |
CTGGTCGTAGGTAGGGTTGA+AGG | 0.530035 | 1:-71708345 | None:intergenic |
AAGGCGATAAGGTGTTGAGT+TGG | 0.533837 | 1:-71708326 | None:intergenic |
GAGTACCTTTCATGGGAAAG+AGG | 0.534334 | 1:+71708892 | MsG0180004007.01.T01:CDS |
CCTGAGGGACTTGTCATCAC+TGG | 0.537996 | 1:-71709467 | None:intergenic |
TGATAAGAAGATTGTTCAGT+GGG | 0.538924 | 1:+71709348 | MsG0180004007.01.T01:CDS |
ATAAGAAGAGTCCTTGGGCT+GGG | 0.539663 | 1:+71708744 | MsG0180004007.01.T01:CDS |
ACAACCATGCCTCAGAAGCT+GGG | 0.540280 | 1:-71708715 | None:intergenic |
CTTTAGCGTAAGGGTGAGAT+GGG | 0.540886 | 1:-71708388 | None:intergenic |
TGTCACGAAGGCGTTACCAT+TGG | 0.543297 | 1:+71709802 | MsG0180004007.01.T01:CDS |
AAAACCCAGCTTCTGAGGCA+TGG | 0.546170 | 1:+71708711 | MsG0180004007.01.T01:CDS |
AAGATAAGAGTACCTTTCAT+GGG | 0.546485 | 1:+71708885 | MsG0180004007.01.T01:CDS |
TTGGGTCGATGGGTTTGGAG+AGG | 0.547307 | 1:-71708307 | None:intergenic |
TGACAAGTCCCTCAGGGTAT+GGG | 0.550285 | 1:+71709474 | MsG0180004007.01.T01:CDS |
CCTTCCTTCTTCCCAGCCCA+AGG | 0.553576 | 1:-71708755 | None:intergenic |
AAGGTGTTGAGTTGGGTCGA+TGG | 0.555828 | 1:-71708318 | None:intergenic |
TGCTGTTCATCGAAGAGGAA+AGG | 0.559395 | 1:-71708473 | None:intergenic |
GGGACGGGTTGATAAAGTAC+TGG | 0.561357 | 1:+71709872 | MsG0180004007.01.T01:CDS |
GTCTGGGTCGTTGTTGTCGT+CGG | 0.562377 | 1:-71708165 | None:intergenic |
GAAGAATAAGAAGAGTCCTT+GGG | 0.563353 | 1:+71708739 | MsG0180004007.01.T01:CDS |
CCTTGGGCTGGGAAGAAGGA+AGG | 0.564772 | 1:+71708755 | MsG0180004007.01.T01:CDS |
GGGAAGAAGGAAGGTTTACA+AGG | 0.566983 | 1:+71708764 | MsG0180004007.01.T01:CDS |
AATAAGAAGAGTCCTTGGGC+TGG | 0.567302 | 1:+71708743 | MsG0180004007.01.T01:CDS |
GACATGACAAAACGTCCATC+CGG | 0.567963 | 1:-71709712 | None:intergenic |
GCATGGTATCGTCGACTTTG+GGG | 0.568457 | 1:-71708256 | None:intergenic |
TGTCATGTCGGGTGATGGTG+AGG | 0.571408 | 1:+71709726 | MsG0180004007.01.T01:CDS |
ATTGTTATCGACAAAAGTAA+TGG | 0.571823 | 1:-71709428 | None:intergenic |
AAAGAGGAAAGGGATTATCA+AGG | 0.572402 | 1:+71708908 | MsG0180004007.01.T01:CDS |
CGGGAAGGGAGGAGACGAGG+TGG | 0.573173 | 1:-71708224 | None:intergenic |
GTGAGATGGGCCTTGAATCG+GGG | 0.578748 | 1:-71708375 | None:intergenic |
CCTTTCATGGGAAAGAGGAA+AGG | 0.585006 | 1:+71708897 | MsG0180004007.01.T01:CDS |
AACAACAACGAAGATGAAGA+TGG | 0.585338 | 1:+71708677 | MsG0180004007.01.T01:CDS |
AGATTGGTTCATACTTGGAG+TGG | 0.586471 | 1:+71708995 | MsG0180004007.01.T01:CDS |
CGGCGAGCCAATTGGCATTG+GGG | 0.587352 | 1:-71709570 | None:intergenic |
CTCGCTTTAGCATCTTTCGG+AGG | 0.588602 | 1:-71708947 | None:intergenic |
AAGAGTATGATCAGCATTTG+GGG | 0.593826 | 1:+71709395 | MsG0180004007.01.T01:CDS |
TTCAGTGGGATATGAATACT+GGG | 0.594900 | 1:+71709362 | MsG0180004007.01.T01:CDS |
TTATATCGACTTTCTCCACT+GGG | 0.596005 | 1:+71709257 | MsG0180004007.01.T01:CDS |
GCTACTTTGCTCTGTTCCAG+AGG | 0.598337 | 1:-71709838 | None:intergenic |
AGATACTTATTTATAGCACA+AGG | 0.600630 | 1:+71709611 | MsG0180004007.01.T01:CDS |
GGCGACGGTTAGGGCGAGCA+TGG | 0.602244 | 1:-71708273 | None:intergenic |
GCTAAAGACGGTTTAGCACA+AGG | 0.608053 | 1:+71708404 | MsG0180004007.01.T01:CDS |
GCGTTACCATTGGTTGCGAG+TGG | 0.608524 | 1:+71709812 | MsG0180004007.01.T01:CDS |
AGGAAAGGGATTATCAAGGT+AGG | 0.608842 | 1:+71708912 | MsG0180004007.01.T01:CDS |
CTAAACCGTCTTTAGCGTAA+GGG | 0.610141 | 1:-71708397 | None:intergenic |
GTCATGTCGGGTGATGGTGA+GGG | 0.625539 | 1:+71709727 | MsG0180004007.01.T01:CDS |
CGGGGCCCAGAGCTGGTCGT+AGG | 0.625795 | 1:-71708357 | None:intergenic |
ACCATATTCCCATACCCTGA+GGG | 0.627603 | 1:-71709482 | None:intergenic |
CAGTGATGACAAGTCCCTCA+GGG | 0.630201 | 1:+71709468 | MsG0180004007.01.T01:CDS |
CATGGTATCGTCGACTTTGG+GGG | 0.631047 | 1:-71708255 | None:intergenic |
TCTCACCCTTACGCTAAAGA+CGG | 0.631080 | 1:+71708392 | MsG0180004007.01.T01:CDS |
AGGATGCCACTCGCAACCAA+TGG | 0.631424 | 1:-71709818 | None:intergenic |
TGTTATGCTGTTCATCGAAG+AGG | 0.631441 | 1:-71708478 | None:intergenic |
TTGGGGTGAAGTGAAATGGA+AGG | 0.631463 | 1:-71709553 | None:intergenic |
CAGAGCAAAGTAGCGACGTG+TGG | 0.656241 | 1:+71709847 | MsG0180004007.01.T01:CDS |
ACTTGGAGTGGACATACGAA+AGG | 0.656984 | 1:+71709007 | MsG0180004007.01.T01:CDS |
GTGATAAGAAGATTGTTCAG+TGG | 0.659340 | 1:+71709347 | MsG0180004007.01.T01:CDS |
CCGACGTAATTGGAAGCAGA+CGG | 0.664084 | 1:-71708530 | None:intergenic |
TGTGAAGCTTAACCCAGATG+AGG | 0.669296 | 1:+71709294 | MsG0180004007.01.T01:CDS |
GATACTTATTTATAGCACAA+GGG | 0.672388 | 1:+71709612 | MsG0180004007.01.T01:CDS |
GGTATGCGTAACCACAAACT+CGG | 0.673398 | 1:+71708425 | MsG0180004007.01.T01:CDS |
GTGATGGTGAGGGTAAGTGT+TGG | 0.677988 | 1:+71709737 | MsG0180004007.01.T01:CDS |
AGATCAGAAGAAATATGCTG+AGG | 0.679573 | 1:+71708799 | MsG0180004007.01.T01:CDS |
CTGGTTATCCAAACTCTGAG+CGG | 0.682803 | 1:-71709590 | None:intergenic |
CCGTCTGCTTCCAATTACGT+CGG | 0.687927 | 1:+71708530 | MsG0180004007.01.T01:CDS |
AGAACTCTCAAGTGTCACGA+AGG | 0.693137 | 1:+71709790 | MsG0180004007.01.T01:CDS |
TACCATATTCCCATACCCTG+AGG | 0.706671 | 1:-71709483 | None:intergenic |
GAAGGCATAGAATGCATGTG+TGG | 0.724483 | 1:-71709535 | None:intergenic |
AACATAAGGAATCTTCCCAG+TGG | 0.726027 | 1:-71709272 | None:intergenic |
AGTATTGGGATACCGAAACG+GGG | 0.752897 | 1:+71709230 | MsG0180004007.01.T01:CDS |
AGAGTATGATCAGCATTTGG+GGG | 0.760214 | 1:+71709396 | MsG0180004007.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGATAAGAATATTAAGTAT+TGG | + | Chr1:71709215-71709234 | MsG0180004007.01.T01:CDS | 15.0% |
!! | TGATAAGAATATTAAGTATT+GGG | + | Chr1:71709216-71709235 | MsG0180004007.01.T01:CDS | 15.0% |
!!! | CATAACACCTTTTTAAAATT+CGG | + | Chr1:71708494-71708513 | MsG0180004007.01.T01:CDS | 20.0% |
! | AAATGTATGAGGACTTATAT+GGG | + | Chr1:71709127-71709146 | MsG0180004007.01.T01:CDS | 25.0% |
! | AGATACTTATTTATAGCACA+AGG | + | Chr1:71709611-71709630 | MsG0180004007.01.T01:CDS | 25.0% |
! | ATTGTTATCGACAAAAGTAA+TGG | - | Chr1:71709431-71709450 | None:intergenic | 25.0% |
! | CTGATATACTTTATAACTAC+AGG | - | Chr1:71709511-71709530 | None:intergenic | 25.0% |
! | GATACTTATTTATAGCACAA+GGG | + | Chr1:71709612-71709631 | MsG0180004007.01.T01:CDS | 25.0% |
! | GGATACTAAGGTTAAAATTT+GGG | + | Chr1:71709087-71709106 | MsG0180004007.01.T01:CDS | 25.0% |
! | TGGATACTAAGGTTAAAATT+TGG | + | Chr1:71709086-71709105 | MsG0180004007.01.T01:CDS | 25.0% |
! | TTCAACTTAACAAAAAGAAG+AGG | + | Chr1:71709641-71709660 | MsG0180004007.01.T01:CDS | 25.0% |
! | TTGTGCTATAAATAAGTATC+TGG | - | Chr1:71709612-71709631 | None:intergenic | 25.0% |
!!! | AGCATAACCGAATTTTAAAA+AGG | - | Chr1:71708504-71708523 | None:intergenic | 25.0% |
!!! | ATTAGGTTTTTTCCAAATTC+GGG | + | Chr1:71709040-71709059 | MsG0180004007.01.T01:CDS | 25.0% |
!!! | GATATTTGTTTTACCAATGA+TGG | + | Chr1:71709169-71709188 | MsG0180004007.01.T01:CDS | 25.0% |
!!! | GATTAGGTTTTTTCCAAATT+CGG | + | Chr1:71709039-71709058 | MsG0180004007.01.T01:CDS | 25.0% |
!!! | TTACTTTTGTCGATAACAAT+CGG | + | Chr1:71709431-71709450 | MsG0180004007.01.T01:CDS | 25.0% |
AAGAAAGGTGAAGAAAAAAG+TGG | + | Chr1:71708833-71708852 | MsG0180004007.01.T01:CDS | 30.0% | |
ATTTGGAAAAAACCTAATCG+CGG | - | Chr1:71709038-71709057 | None:intergenic | 30.0% | |
CAAAAACTTAGTTCCATCAT+TGG | - | Chr1:71709185-71709204 | None:intergenic | 30.0% | |
GAAATGTATGAGGACTTATA+TGG | + | Chr1:71709126-71709145 | MsG0180004007.01.T01:CDS | 30.0% | |
TGATAAGAAGATTGTTCAGT+GGG | + | Chr1:71709348-71709367 | MsG0180004007.01.T01:CDS | 30.0% | |
TTGTTATATACCGAAGAGAT+TGG | + | Chr1:71708979-71708998 | MsG0180004007.01.T01:CDS | 30.0% | |
! | GGATAAACAGAATGTTTTGT+TGG | + | Chr1:71709315-71709334 | MsG0180004007.01.T01:CDS | 30.0% |
! | TTTTTCTCTTCTTCTGTTCA+CGG | - | Chr1:71708610-71708629 | None:intergenic | 30.0% |
!! | AAAGATAAGAGTACCTTTCA+TGG | + | Chr1:71708884-71708903 | MsG0180004007.01.T01:CDS | 30.0% |
!! | AAGATAAGAGTACCTTTCAT+GGG | + | Chr1:71708885-71708904 | MsG0180004007.01.T01:CDS | 30.0% |
!! | ATTTGGGATGTTTTCAATAC+TGG | + | Chr1:71709103-71709122 | MsG0180004007.01.T01:CDS | 30.0% |
!! | TTTGGGATGTTTTCAATACT+GGG | + | Chr1:71709104-71709123 | MsG0180004007.01.T01:CDS | 30.0% |
AAAGAGGAAAGGGATTATCA+AGG | + | Chr1:71708908-71708927 | MsG0180004007.01.T01:CDS | 35.0% | |
AACAAAAAGAAGAGGTTTGC+TGG | + | Chr1:71709649-71709668 | MsG0180004007.01.T01:CDS | 35.0% | |
AACAACAACGAAGATGAAGA+TGG | + | Chr1:71708677-71708696 | MsG0180004007.01.T01:CDS | 35.0% | |
ACATTCTGTTTATCCTCATC+TGG | - | Chr1:71709310-71709329 | None:intergenic | 35.0% | |
AGAATCAAATGACCCGAATT+TGG | - | Chr1:71709055-71709074 | None:intergenic | 35.0% | |
AGATCAGAAGAAATATGCTG+AGG | + | Chr1:71708799-71708818 | MsG0180004007.01.T01:CDS | 35.0% | |
ATCTCAAAACCCTAATTCAC+CGG | + | Chr1:71708193-71708212 | MsG0180004007.01.T01:CDS | 35.0% | |
CAAGTATGAACCAATCTCTT+CGG | - | Chr1:71708992-71709011 | None:intergenic | 35.0% | |
CATTCTGTTTATCCTCATCT+GGG | - | Chr1:71709309-71709328 | None:intergenic | 35.0% | |
GAAGAATAAGAAGAGTCCTT+GGG | + | Chr1:71708739-71708758 | MsG0180004007.01.T01:CDS | 35.0% | |
GTGATAAGAAGATTGTTCAG+TGG | + | Chr1:71709347-71709366 | MsG0180004007.01.T01:CDS | 35.0% | |
TCAATACTGGGAAATGTATG+AGG | + | Chr1:71709116-71709135 | MsG0180004007.01.T01:CDS | 35.0% | |
TGAAGAATAAGAAGAGTCCT+TGG | + | Chr1:71708738-71708757 | MsG0180004007.01.T01:CDS | 35.0% | |
TTACTCGCTTTAGCATCTTT+CGG | - | Chr1:71708953-71708972 | None:intergenic | 35.0% | |
TTCAGTGGGATATGAATACT+GGG | + | Chr1:71709362-71709381 | MsG0180004007.01.T01:CDS | 35.0% | |
! | AAGAGTATGATCAGCATTTG+GGG | + | Chr1:71709395-71709414 | MsG0180004007.01.T01:CDS | 35.0% |
! | CAAGAGTATGATCAGCATTT+GGG | + | Chr1:71709394-71709413 | MsG0180004007.01.T01:CDS | 35.0% |
! | GAGAATTTTCCGGTGAATTA+GGG | - | Chr1:71708205-71708224 | None:intergenic | 35.0% |
! | GGTGAAGAAAAAAGTGGTTT+TGG | + | Chr1:71708839-71708858 | MsG0180004007.01.T01:CDS | 35.0% |
! | TCAAGAGTATGATCAGCATT+TGG | + | Chr1:71709393-71709412 | MsG0180004007.01.T01:CDS | 35.0% |
!! | AAACAGAATGTTTTGTTGGC+TGG | + | Chr1:71709319-71709338 | MsG0180004007.01.T01:CDS | 35.0% |
!! | TAAGTATTGGGATACCGAAA+CGG | + | Chr1:71709228-71709247 | MsG0180004007.01.T01:CDS | 35.0% |
!! | TTATATCGACTTTCTCCACT+GGG | + | Chr1:71709257-71709276 | MsG0180004007.01.T01:CDS | 35.0% |
!!! | GAAGAAAAAAGTGGTTTTGG+TGG | + | Chr1:71708842-71708861 | MsG0180004007.01.T01:CDS | 35.0% |
!!! | TTTTGGTGGTGAAAAAGTTG+AGG | + | Chr1:71708856-71708875 | MsG0180004007.01.T01:CDS | 35.0% |
AACATAAGGAATCTTCCCAG+TGG | - | Chr1:71709275-71709294 | None:intergenic | 40.0% | |
AGAGTATGATCAGCATTTGG+GGG | + | Chr1:71709396-71709415 | MsG0180004007.01.T01:CDS | 40.0% | |
AGGAAAGGGATTATCAAGGT+AGG | + | Chr1:71708912-71708931 | MsG0180004007.01.T01:CDS | 40.0% | |
ATCGAAATCACCGACGTAAT+TGG | - | Chr1:71708543-71708562 | None:intergenic | 40.0% | |
CTAAACCGTCTTTAGCGTAA+GGG | - | Chr1:71708400-71708419 | None:intergenic | 40.0% | |
CTTTCATGGGAAAGAGGAAA+GGG | + | Chr1:71708898-71708917 | MsG0180004007.01.T01:CDS | 40.0% | |
GGGTCATTCAAAAGCTGTTA+GGG | + | Chr1:71709147-71709166 | MsG0180004007.01.T01:CDS | 40.0% | |
GGGTTAAGCTTCACAACATA+AGG | - | Chr1:71709289-71709308 | None:intergenic | 40.0% | |
GTTCAGTGGGATATGAATAC+TGG | + | Chr1:71709361-71709380 | MsG0180004007.01.T01:CDS | 40.0% | |
TGGGTCATTCAAAAGCTGTT+AGG | + | Chr1:71709146-71709165 | MsG0180004007.01.T01:CDS | 40.0% | |
TGTTATGCTGTTCATCGAAG+AGG | - | Chr1:71708481-71708500 | None:intergenic | 40.0% | |
TTCGGGTCATTTGATTCTCT+CGG | + | Chr1:71709057-71709076 | MsG0180004007.01.T01:CDS | 40.0% | |
TTTGCTGGACATATTGTTGC+TGG | + | Chr1:71709664-71709683 | MsG0180004007.01.T01:CDS | 40.0% | |
! | AGATTGGTTCATACTTGGAG+TGG | + | Chr1:71708995-71709014 | MsG0180004007.01.T01:CDS | 40.0% |
! | CGAAGAGATTGGTTCATACT+TGG | + | Chr1:71708990-71709009 | MsG0180004007.01.T01:CDS | 40.0% |
! | GGAGAATTTTCCGGTGAATT+AGG | - | Chr1:71708206-71708225 | None:intergenic | 40.0% |
! | TTGTCAGGTCAATTTTTCGC+CGG | + | Chr1:71709693-71709712 | MsG0180004007.01.T01:CDS | 40.0% |
!! | AAGTATTGGGATACCGAAAC+GGG | + | Chr1:71709229-71709248 | MsG0180004007.01.T01:CDS | 40.0% |
!! | GTTATATCGACTTTCTCCAC+TGG | + | Chr1:71709256-71709275 | MsG0180004007.01.T01:CDS | 40.0% |
!!! | GGAACTAAGTTTTTGAGTGC+TGG | + | Chr1:71709190-71709209 | MsG0180004007.01.T01:CDS | 40.0% |
!!! | GGTGAATTAGGGTTTTGAGA+TGG | - | Chr1:71708194-71708213 | None:intergenic | 40.0% |
AATAAGAAGAGTCCTTGGGC+TGG | + | Chr1:71708743-71708762 | MsG0180004007.01.T01:CDS | 45.0% | |
ACCATATTCCCATACCCTGA+GGG | - | Chr1:71709485-71709504 | None:intergenic | 45.0% | |
ACTTGGAGTGGACATACGAA+AGG | + | Chr1:71709007-71709026 | MsG0180004007.01.T01:CDS | 45.0% | |
AGAACTCTCAAGTGTCACGA+AGG | + | Chr1:71709790-71709809 | MsG0180004007.01.T01:CDS | 45.0% | |
ATAAGAAGAGTCCTTGGGCT+GGG | + | Chr1:71708744-71708763 | MsG0180004007.01.T01:CDS | 45.0% | |
CCTTTCATGGGAAAGAGGAA+AGG | + | Chr1:71708897-71708916 | MsG0180004007.01.T01:CDS | 45.0% | |
CCTTTCCTCTTTCCCATGAA+AGG | - | Chr1:71708900-71708919 | None:intergenic | 45.0% | |
CTGGTTATCCAAACTCTGAG+CGG | - | Chr1:71709593-71709612 | None:intergenic | 45.0% | |
CTTTAGCGTAAGGGTGAGAT+GGG | - | Chr1:71708391-71708410 | None:intergenic | 45.0% | |
GACATGACAAAACGTCCATC+CGG | - | Chr1:71709715-71709734 | None:intergenic | 45.0% | |
GAGTACCTTTCATGGGAAAG+AGG | + | Chr1:71708892-71708911 | MsG0180004007.01.T01:CDS | 45.0% | |
GATTGAAAACCCAGCTTCTG+AGG | + | Chr1:71708706-71708725 | MsG0180004007.01.T01:CDS | 45.0% | |
GCTAAACCGTCTTTAGCGTA+AGG | - | Chr1:71708401-71708420 | None:intergenic | 45.0% | |
GCTAAAGACGGTTTAGCACA+AGG | + | Chr1:71708404-71708423 | MsG0180004007.01.T01:CDS | 45.0% | |
GGGAAGAAGGAAGGTTTACA+AGG | + | Chr1:71708764-71708783 | MsG0180004007.01.T01:CDS | 45.0% | |
GGGATTATCAAGGTAGGTCT+TGG | + | Chr1:71708918-71708937 | MsG0180004007.01.T01:CDS | 45.0% | |
GGTATGCGTAACCACAAACT+CGG | + | Chr1:71708425-71708444 | MsG0180004007.01.T01:CDS | 45.0% | |
TACCATATTCCCATACCCTG+AGG | - | Chr1:71709486-71709505 | None:intergenic | 45.0% | |
TCTCACCCTTACGCTAAAGA+CGG | + | Chr1:71708392-71708411 | MsG0180004007.01.T01:CDS | 45.0% | |
TCTTCTTCTGTTCACGGTGT+GGG | - | Chr1:71708604-71708623 | None:intergenic | 45.0% | |
TCTTTAGCGTAAGGGTGAGA+TGG | - | Chr1:71708392-71708411 | None:intergenic | 45.0% | |
TGCTGTTCATCGAAGAGGAA+AGG | - | Chr1:71708476-71708495 | None:intergenic | 45.0% | |
TGTGAAGCTTAACCCAGATG+AGG | + | Chr1:71709294-71709313 | MsG0180004007.01.T01:CDS | 45.0% | |
TGTTGCTGGATATGCTTGTC+AGG | + | Chr1:71709678-71709697 | MsG0180004007.01.T01:CDS | 45.0% | |
TTGGGGTGAAGTGAAATGGA+AGG | - | Chr1:71709556-71709575 | None:intergenic | 45.0% | |
TTTGATTCTCTCGGCTGGTA+TGG | + | Chr1:71709066-71709085 | MsG0180004007.01.T01:CDS | 45.0% | |
! | AGACGAGGTGGAGAATTTTC+CGG | - | Chr1:71708215-71708234 | None:intergenic | 45.0% |
! | AGTATTGGGATACCGAAACG+GGG | + | Chr1:71709230-71709249 | MsG0180004007.01.T01:CDS | 45.0% |
! | ATGGGTTTGGAGAGGGTTTT+GGG | - | Chr1:71708302-71708321 | None:intergenic | 45.0% |
! | GAAGGCATAGAATGCATGTG+TGG | - | Chr1:71709538-71709557 | None:intergenic | 45.0% |
! | GAGGAGCACGCAAAAAAGAA+AGG | + | Chr1:71708818-71708837 | MsG0180004007.01.T01:CDS | 45.0% |
! | GATGGACGTTTTGTCATGTC+GGG | + | Chr1:71709715-71709734 | MsG0180004007.01.T01:CDS | 45.0% |
! | GGATGGACGTTTTGTCATGT+CGG | + | Chr1:71709714-71709733 | MsG0180004007.01.T01:CDS | 45.0% |
!! | AAGGCGATAAGGTGTTGAGT+TGG | - | Chr1:71708329-71708348 | None:intergenic | 45.0% |
!! | AGCATGGTATCGTCGACTTT+GGG | - | Chr1:71708260-71708279 | None:intergenic | 45.0% |
!! | AGGCGATAAGGTGTTGAGTT+GGG | - | Chr1:71708328-71708347 | None:intergenic | 45.0% |
!! | GTAAGTGTTGGTTCTGGGAT+TGG | + | Chr1:71709749-71709768 | MsG0180004007.01.T01:CDS | 45.0% |
!! | TGAGGGTAAGTGTTGGTTCT+GGG | + | Chr1:71709744-71709763 | MsG0180004007.01.T01:CDS | 45.0% |
!!! | GGTTTTGAGATGGTGAGTCT+GGG | - | Chr1:71708184-71708203 | None:intergenic | 45.0% |
AACAACCATGCCTCAGAAGC+TGG | - | Chr1:71708719-71708738 | None:intergenic | 50.0% | |
ACAACCATGCCTCAGAAGCT+GGG | - | Chr1:71708718-71708737 | None:intergenic | 50.0% | |
AGGTAGGGTTGAAGGCGATA+AGG | - | Chr1:71708340-71708359 | None:intergenic | 50.0% | |
ATGACAAGTCCCTCAGGGTA+TGG | + | Chr1:71709473-71709492 | MsG0180004007.01.T01:CDS | 50.0% | |
CACTTCACCCCAATGCCAAT+TGG | + | Chr1:71709563-71709582 | MsG0180004007.01.T01:CDS | 50.0% | |
CAGTGATGACAAGTCCCTCA+GGG | + | Chr1:71709468-71709487 | MsG0180004007.01.T01:CDS | 50.0% | |
CCGACGTAATTGGAAGCAGA+CGG | - | Chr1:71708533-71708552 | None:intergenic | 50.0% | |
CCGTCTGCTTCCAATTACGT+CGG | + | Chr1:71708530-71708549 | MsG0180004007.01.T01:CDS | 50.0% | |
CGATATAACCTGCCCCGTTT+CGG | - | Chr1:71709245-71709264 | None:intergenic | 50.0% | |
CGTTGTTGTCGTCGGTGTAT+TGG | - | Chr1:71708160-71708179 | None:intergenic | 50.0% | |
CTCGCTTTAGCATCTTTCGG+AGG | - | Chr1:71708950-71708969 | None:intergenic | 50.0% | |
CTCGGCTGGTATGGATACTA+AGG | + | Chr1:71709075-71709094 | MsG0180004007.01.T01:CDS | 50.0% | |
CTCTTCTTCTGTTCACGGTG+TGG | - | Chr1:71708605-71708624 | None:intergenic | 50.0% | |
CTTCGACGAAACCGAGTTTG+TGG | - | Chr1:71708439-71708458 | None:intergenic | 50.0% | |
GGTCATTTGATTCTCTCGGC+TGG | + | Chr1:71709061-71709080 | MsG0180004007.01.T01:CDS | 50.0% | |
GTATGATCAGCATTTGGGGG+CGG | + | Chr1:71709399-71709418 | MsG0180004007.01.T01:CDS | 50.0% | |
TCCCTCAGGGTATGGGAATA+TGG | + | Chr1:71709481-71709500 | MsG0180004007.01.T01:CDS | 50.0% | |
TGACAAGTCCCTCAGGGTAT+GGG | + | Chr1:71709474-71709493 | MsG0180004007.01.T01:CDS | 50.0% | |
! | CAGGTCAATTTTTCGCCGGA+TGG | + | Chr1:71709697-71709716 | MsG0180004007.01.T01:CDS | 50.0% |
! | CGTTTTGTCATGTCGGGTGA+TGG | + | Chr1:71709721-71709740 | MsG0180004007.01.T01:CDS | 50.0% |
! | GCTACTTTGCTCTGTTCCAG+AGG | - | Chr1:71709841-71709860 | None:intergenic | 50.0% |
! | GGCATTGGGGTGAAGTGAAA+TGG | - | Chr1:71709560-71709579 | None:intergenic | 50.0% |
! | GTGATGGTGAGGGTAAGTGT+TGG | + | Chr1:71709737-71709756 | MsG0180004007.01.T01:CDS | 50.0% |
! | TGGGTTTGGAGAGGGTTTTG+GGG | - | Chr1:71708301-71708320 | None:intergenic | 50.0% |
!! | AAAACCCAGCTTCTGAGGCA+TGG | + | Chr1:71708711-71708730 | MsG0180004007.01.T01:CDS | 50.0% |
!! | AAGGTGTTGAGTTGGGTCGA+TGG | - | Chr1:71708321-71708340 | None:intergenic | 50.0% |
!! | AGGTGTTGAGTTGGGTCGAT+GGG | - | Chr1:71708320-71708339 | None:intergenic | 50.0% |
!! | CATGGTATCGTCGACTTTGG+GGG | - | Chr1:71708258-71708277 | None:intergenic | 50.0% |
!! | CGAAAGGTGTTTCCGCGATT+AGG | + | Chr1:71709023-71709042 | MsG0180004007.01.T01:CDS | 50.0% |
!! | GAGCATGGTATCGTCGACTT+TGG | - | Chr1:71708261-71708280 | None:intergenic | 50.0% |
!! | GATGGGTTTGGAGAGGGTTT+TGG | - | Chr1:71708303-71708322 | None:intergenic | 50.0% |
!! | GCATGGTATCGTCGACTTTG+GGG | - | Chr1:71708259-71708278 | None:intergenic | 50.0% |
!! | GGGACGGGTTGATAAAGTAC+TGG | + | Chr1:71709872-71709891 | MsG0180004007.01.T01:CDS | 50.0% |
!! | GTGAGGGTAAGTGTTGGTTC+TGG | + | Chr1:71709743-71709762 | MsG0180004007.01.T01:CDS | 50.0% |
!! | TGTCACGAAGGCGTTACCAT+TGG | + | Chr1:71709802-71709821 | MsG0180004007.01.T01:CDS | 50.0% |
!! | TTGAGTTGGGTCGATGGGTT+TGG | - | Chr1:71708315-71708334 | None:intergenic | 50.0% |
!!! | GGGTTTTGAGATGGTGAGTC+TGG | - | Chr1:71708185-71708204 | None:intergenic | 50.0% |
!!! | TTTGGAGAGGGTTTTGGGGT+CGG | - | Chr1:71708297-71708316 | None:intergenic | 50.0% |
AGGATGCCACTCGCAACCAA+TGG | - | Chr1:71709821-71709840 | None:intergenic | 55.0% | |
CAAAGTAGCGACGTGTGGCT+GGG | + | Chr1:71709852-71709871 | MsG0180004007.01.T01:CDS | 55.0% | |
CAGAGCAAAGTAGCGACGTG+TGG | + | Chr1:71709847-71709866 | MsG0180004007.01.T01:CDS | 55.0% | |
CCAGTGATGACAAGTCCCTC+AGG | + | Chr1:71709467-71709486 | MsG0180004007.01.T01:CDS | 55.0% | |
CCTGAGGGACTTGTCATCAC+TGG | - | Chr1:71709470-71709489 | None:intergenic | 55.0% | |
CTGGTCGTAGGTAGGGTTGA+AGG | - | Chr1:71708348-71708367 | None:intergenic | 55.0% | |
GGGTGAGATGGGCCTTGAAT+CGG | - | Chr1:71708380-71708399 | None:intergenic | 55.0% | |
GGTGAGATGGGCCTTGAATC+GGG | - | Chr1:71708379-71708398 | None:intergenic | 55.0% | |
GTCTGGGTCGTTGTTGTCGT+CGG | - | Chr1:71708168-71708187 | None:intergenic | 55.0% | |
GTGAGATGGGCCTTGAATCG+GGG | - | Chr1:71708378-71708397 | None:intergenic | 55.0% | |
! | GCGTTACCATTGGTTGCGAG+TGG | + | Chr1:71709812-71709831 | MsG0180004007.01.T01:CDS | 55.0% |
! | GTCATGTCGGGTGATGGTGA+GGG | + | Chr1:71709727-71709746 | MsG0180004007.01.T01:CDS | 55.0% |
! | TGGGTCGATGGGTTTGGAGA+GGG | - | Chr1:71708309-71708328 | None:intergenic | 55.0% |
! | TGTCATGTCGGGTGATGGTG+AGG | + | Chr1:71709726-71709745 | MsG0180004007.01.T01:CDS | 55.0% |
! | TTGGGTCGATGGGTTTGGAG+AGG | - | Chr1:71708310-71708329 | None:intergenic | 55.0% |
ACCCTACCTACGACCAGCTC+TGG | + | Chr1:71708351-71708370 | MsG0180004007.01.T01:CDS | 60.0% | |
ACTCTGAGCGGCGAGCCAAT+TGG | - | Chr1:71709581-71709600 | None:intergenic | 60.0% | |
AGCGGCGAGCCAATTGGCAT+TGG | - | Chr1:71709575-71709594 | None:intergenic | 60.0% | |
CCCAGAGCTGGTCGTAGGTA+GGG | - | Chr1:71708355-71708374 | None:intergenic | 60.0% | |
CCCTACCTACGACCAGCTCT+GGG | + | Chr1:71708352-71708371 | MsG0180004007.01.T01:CDS | 60.0% | |
CCTTCCTTCTTCCCAGCCCA+AGG | - | Chr1:71708758-71708777 | None:intergenic | 60.0% | |
CGGCGAGCCAATTGGCATTG+GGG | - | Chr1:71709573-71709592 | None:intergenic | 60.0% | |
GCAAAGTAGCGACGTGTGGC+TGG | + | Chr1:71709851-71709870 | MsG0180004007.01.T01:CDS | 60.0% | |
GCGGCGAGCCAATTGGCATT+GGG | - | Chr1:71709574-71709593 | None:intergenic | 60.0% | |
TGGTTGCGAGTGGCATCCTC+TGG | + | Chr1:71709822-71709841 | MsG0180004007.01.T01:CDS | 60.0% | |
TTGGGATACCGAAACGGGGC+AGG | + | Chr1:71709234-71709253 | MsG0180004007.01.T01:CDS | 60.0% | |
! | CCTTGGGCTGGGAAGAAGGA+AGG | + | Chr1:71708755-71708774 | MsG0180004007.01.T01:CDS | 60.0% |
! | GAGTCCTTGGGCTGGGAAGA+AGG | + | Chr1:71708751-71708770 | MsG0180004007.01.T01:CDS | 60.0% |
! | TTGGCTCGCCGCTCAGAGTT+TGG | + | Chr1:71709582-71709601 | MsG0180004007.01.T01:CDS | 60.0% |
! | TTTGGGGTCGGCGACGGTTA+GGG | - | Chr1:71708285-71708304 | None:intergenic | 60.0% |
!! | GGTATCGTCGACTTTGGGGG+CGG | - | Chr1:71708255-71708274 | None:intergenic | 60.0% |
!!! | TTTTGGGGTCGGCGACGGTT+AGG | - | Chr1:71708286-71708305 | None:intergenic | 60.0% |
CTTGAATCGGGGCCCAGAGC+TGG | - | Chr1:71708367-71708386 | None:intergenic | 65.0% | |
GAACGGGAAGGGAGGAGACG+AGG | - | Chr1:71708230-71708249 | None:intergenic | 65.0% | |
GCCCAGAGCTGGTCGTAGGT+AGG | - | Chr1:71708356-71708375 | None:intergenic | 65.0% | |
GTAGCGACGTGTGGCTGGGA+CGG | + | Chr1:71709856-71709875 | MsG0180004007.01.T01:CDS | 65.0% | |
TAGCGACGTGTGGCTGGGAC+GGG | + | Chr1:71709857-71709876 | MsG0180004007.01.T01:CDS | 65.0% | |
!! | ATCGTCGACTTTGGGGGCGG+CGG | - | Chr1:71708252-71708271 | None:intergenic | 65.0% |
!! | CAGCTCTGGGCCCCGATTCA+AGG | + | Chr1:71708365-71708384 | MsG0180004007.01.T01:CDS | 65.0% |
!!! | GAGGGTTTTGGGGTCGGCGA+CGG | - | Chr1:71708291-71708310 | None:intergenic | 65.0% |
CGGGAAGGGAGGAGACGAGG+TGG | - | Chr1:71708227-71708246 | None:intergenic | 70.0% | |
GGCGACGGTTAGGGCGAGCA+TGG | - | Chr1:71708276-71708295 | None:intergenic | 70.0% | |
! | CGACTTTGGGGGCGGCGGAA+CGG | - | Chr1:71708247-71708266 | None:intergenic | 70.0% |
! | GACTTTGGGGGCGGCGGAAC+GGG | - | Chr1:71708246-71708265 | None:intergenic | 70.0% |
CGGGGCCCAGAGCTGGTCGT+AGG | - | Chr1:71708360-71708379 | None:intergenic | 75.0% | |
TGGGGGCGGCGGAACGGGAA+GGG | - | Chr1:71708241-71708260 | None:intergenic | 75.0% | |
TTGGGGGCGGCGGAACGGGA+AGG | - | Chr1:71708242-71708261 | None:intergenic | 75.0% | |
! | GGGCGGCGGAACGGGAAGGG+AGG | - | Chr1:71708238-71708257 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 71708143 | 71709897 | 71708143 | ID=MsG0180004007.01;Name=MsG0180004007.01 |
Chr1 | mRNA | 71708143 | 71709897 | 71708143 | ID=MsG0180004007.01.T01;Parent=MsG0180004007.01;Name=MsG0180004007.01.T01;_AED=0.37;_eAED=0.37;_QI=0|-1|0|1|-1|1|1|0|584 |
Chr1 | exon | 71708143 | 71709897 | 71708143 | ID=MsG0180004007.01.T01:exon:4890;Parent=MsG0180004007.01.T01 |
Chr1 | CDS | 71708143 | 71709897 | 71708143 | ID=MsG0180004007.01.T01:cds;Parent=MsG0180004007.01.T01 |
Gene Sequence |
Protein sequence |