AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004377.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004377.01.T01 MTR_1g078040 79.396 364 37 2 1 326 575 938 0.0 579
MsG0180004377.01.T01 MTR_1g078040 79.396 364 37 2 1 326 567 930 0.0 578
MsG0180004377.01.T01 MTR_1g078030 82.979 282 32 1 306 571 114 395 3.70e-164 473
MsG0180004377.01.T01 MTR_3g092640 54.930 284 109 3 306 570 141 424 2.18e-110 337
MsG0180004377.01.T01 MTR_5g007030 47.126 261 117 5 325 566 67 325 1.38e-75 243
MsG0180004377.01.T01 MTR_5g007030 47.126 261 117 5 325 566 177 435 1.21e-73 241
MsG0180004377.01.T01 MTR_5g097890 56.383 94 41 0 233 326 37 130 4.96e-25 110
MsG0180004377.01.T01 MTR_5g097890 56.383 94 41 0 233 326 37 130 6.52e-25 110
MsG0180004377.01.T01 MTR_4g005140 28.807 243 148 7 323 544 113 351 2.18e-22 99.8
MsG0180004377.01.T01 MTR_1g078050 58.621 87 33 2 1 86 547 631 4.53e-17 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004377.01.T01 AT1G64720 60.071 283 88 4 306 571 111 385 3.81e-114 345
MsG0180004377.01.T01 AT1G10390 46.995 366 143 6 3 326 613 969 2.43e-89 297
MsG0180004377.01.T01 AT1G10390 46.995 366 143 6 3 326 613 969 2.43e-89 297
MsG0180004377.01.T01 AT1G10390 46.995 366 143 6 3 326 613 969 2.43e-89 297
MsG0180004377.01.T01 AT5G54170 47.078 308 134 9 289 570 129 433 5.06e-84 269
MsG0180004377.01.T01 AT4G14500 46.622 296 132 6 293 566 141 432 5.57e-74 243
MsG0180004377.01.T01 AT3G23080 48.014 277 121 7 309 566 115 387 3.03e-72 236
MsG0180004377.01.T01 AT3G23080 48.014 277 121 7 309 566 115 387 3.03e-72 236
MsG0180004377.01.T01 AT3G23080 48.014 277 121 7 309 566 146 418 1.39e-71 236
MsG0180004377.01.T01 AT1G59660 42.700 363 136 7 3 325 597 927 1.07e-68 240
MsG0180004377.01.T01 AT1G59660 42.149 363 131 8 3 325 597 920 3.39e-66 233
MsG0180004377.01.T01 AT1G59660 42.149 363 131 8 3 325 597 920 3.39e-66 233
MsG0180004377.01.T01 AT4G14500 50.000 128 57 2 293 413 141 268 7.28e-31 122
MsG0180004377.01.T01 AT3G13062 29.213 267 169 6 323 570 125 390 7.08e-28 117
MsG0180004377.01.T01 AT3G13062 29.213 267 169 6 323 570 125 390 7.33e-28 116
MsG0180004377.01.T01 AT3G13062 28.679 265 169 6 325 570 135 398 3.83e-26 111
MsG0180004377.01.T01 AT1G80680 52.427 103 49 0 224 326 33 135 2.89e-25 111
MsG0180004377.01.T01 AT1G55960 30.962 239 142 7 328 544 131 368 1.69e-24 106
MsG0180004377.01.T01 AT1G55960 28.033 239 124 9 328 544 131 343 1.90e-13 72.8

Find 169 sgRNAs with CRISPR-Local

Find 636 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATCATAGGTCGTCGAATT+TGG 0.185811 1:-77201405 MsG0180004377.01.T01:CDS
AGTTGGTTAGGGATTTCTTT+TGG 0.205035 1:-77201659 MsG0180004377.01.T01:CDS
GTGACCAAGGCGGTTGTATT+TGG 0.231338 1:-77200006 MsG0180004377.01.T01:CDS
GTTCTTTCACTATGAAGATA+TGG 0.258130 1:-77200343 MsG0180004377.01.T01:CDS
CTTGCCTGCACCCTTGATCA+AGG 0.320705 1:-77200033 MsG0180004377.01.T01:CDS
TTAGGGACTGCAGCTGAAAA+TGG 0.325573 1:-77206777 MsG0180004377.01.T01:intron
CGCTAAGCTTGGAGTTCGTC+AGG 0.333843 1:-77200304 MsG0180004377.01.T01:CDS
GCTTTCTCAGAAGTCCTTCC+AGG 0.348991 1:+77208004 None:intergenic
GCTGGTGCAAGTAGCTTTGC+TGG 0.355697 1:-77208900 MsG0180004377.01.T01:CDS
ATGCGAGTCCTGAGTTGGTT+AGG 0.358805 1:-77201671 MsG0180004377.01.T01:CDS
TTCAGTCTCCAACAGGTTAC+CGG 0.359683 1:+77200131 None:intergenic
GGCTATTCCCCAGAGTTCTA+TGG 0.359916 1:-77208625 MsG0180004377.01.T01:CDS
TATCATAGGTCGTCGAATTT+GGG 0.370573 1:-77201404 MsG0180004377.01.T01:CDS
CTCCGAGGTGGTCCTATCGT+TGG 0.377064 1:+77207343 None:intergenic
TTCTTTCACTATGAAGATAT+GGG 0.383405 1:-77200342 MsG0180004377.01.T01:CDS
TTATTCAGCCCTTGTCCAAC+AGG 0.390186 1:+77206351 None:intergenic
CCTGTTGGAGACTGAAAATC+AGG 0.397121 1:-77200124 MsG0180004377.01.T01:CDS
GCCCGACGGTTTGGAAAATT+CGG 0.400471 1:-77199979 MsG0180004377.01.T01:CDS
AACCACTCCTTCCGTTCATA+TGG 0.402505 1:-77208528 MsG0180004377.01.T01:CDS
TTTGGAATAGCCCGACGGTT+TGG 0.406644 1:-77199988 MsG0180004377.01.T01:CDS
ACTGCCTCGTATTCATGAAT+TGG 0.411963 1:-77206556 MsG0180004377.01.T01:CDS
TAATCAGACCGTCGCAGCTT+TGG 0.412110 1:+77206585 None:intergenic
TATAAGAAAGAAAGGGATTC+CGG 0.417822 1:-77200237 MsG0180004377.01.T01:CDS
GCTTTGCCTCAGATGTCAAT+TGG 0.419405 1:-77208560 MsG0180004377.01.T01:CDS
TTCTCTATCACTGCAAAAGA+AGG 0.424377 1:+77201429 None:intergenic
TGTCCCATGGAGCAGTGGCC+TGG 0.426491 1:-77208022 MsG0180004377.01.T01:CDS
CAAAGCAGGAAGTGTTCAAA+TGG 0.431349 1:+77208577 None:intergenic
TCCGAGGTGGTCCTATCGTT+GGG 0.431469 1:+77207344 None:intergenic
GGTGGTCCTATCGTTGGGTT+TGG 0.431893 1:+77207349 None:intergenic
ATACCTAAGCTTCTAGTTGT+TGG 0.433725 1:-77200069 MsG0180004377.01.T01:CDS
TGTTCAAATGGGTTTGTAAT+GGG 0.445096 1:+77208589 None:intergenic
ATCTACACCTTCTTTCCAAT+CGG 0.446617 1:-77209069 MsG0180004377.01.T01:CDS
GCATCAGCCTTTGGTGTGGT+TGG 0.450225 1:+77208085 None:intergenic
TGGTCACTAGCCCTTGATCA+AGG 0.452319 1:+77200022 None:intergenic
TGAACTAACCAGGTTGTGTC+TGG 0.452741 1:+77209018 None:intergenic
TTGGAGTTCGTCAGGGTATG+TGG 0.453950 1:-77200296 MsG0180004377.01.T01:CDS
ATGAAAAGGGCATCAGCCTT+TGG 0.454264 1:+77208076 None:intergenic
TTGAGGAGTGTTACCTCAGC+AGG 0.461242 1:+77206327 None:intergenic
GTGTTCAAATGGGTTTGTAA+TGG 0.461556 1:+77208588 None:intergenic
ATGGTCTTCGTTATTCCCAT+TGG 0.461838 1:+77206707 None:intergenic
TACGTACGTATAAGAAAGAA+AGG 0.462465 1:-77200245 MsG0180004377.01.T01:CDS
GCTCAAACTCAAAGCATGTT+TGG 0.463757 1:-77208876 MsG0180004377.01.T01:CDS
CTTCCAGGCCACTGCTCCAT+GGG 0.464292 1:+77208019 None:intergenic
ACACGCATCTGTTGCATATG+TGG 0.471505 1:-77200414 MsG0180004377.01.T01:CDS
TGCGAGTCCTGAGTTGGTTA+GGG 0.472434 1:-77201670 MsG0180004377.01.T01:CDS
CCTTCCAGGCCACTGCTCCA+TGG 0.473071 1:+77208018 None:intergenic
CGAAGACCATTCTCTGCAAA+AGG 0.475245 1:-77206694 MsG0180004377.01.T01:CDS
CTTGATCAAGGGTGCAGGCA+AGG 0.479777 1:+77200034 None:intergenic
GCCAAAGTTGCTAAAGGAAA+AGG 0.480874 1:+77209040 None:intergenic
ATTGGAAAGAAGGTGTAGAT+TGG 0.481485 1:+77209072 None:intergenic
TTCTTATACGTACGTAGTCC+AGG 0.487357 1:+77200252 None:intergenic
TTGACATGACTGCAGAATCC+TGG 0.488318 1:+77206513 None:intergenic
GACTTTGTCGTTGGAAGGCA+AGG 0.491709 1:-77206489 MsG0180004377.01.T01:CDS
GCCTCGTATTCATGAATTGG+CGG 0.491804 1:-77206553 MsG0180004377.01.T01:CDS
ATGAAGATATGGGCATACCT+TGG 0.492383 1:-77200332 MsG0180004377.01.T01:CDS
CCGCCAACAACTAGAAGCTT+AGG 0.492437 1:+77200066 None:intergenic
GTACCAGCCGATTGGAAAGA+AGG 0.493122 1:+77209062 None:intergenic
CTGTGCAACCATAGAACTCT+GGG 0.495597 1:+77208617 None:intergenic
GTCGTTGGAAGGCAAGGTTA+TGG 0.496990 1:-77206483 MsG0180004377.01.T01:CDS
TATTCATGAATTGGCGGCTA+AGG 0.497209 1:-77206547 MsG0180004377.01.T01:CDS
GCTGTGCAACCATAGAACTC+TGG 0.497441 1:+77208616 None:intergenic
CCAGTTAAATCAAGAAAAGA+TGG 0.498146 1:-77200390 MsG0180004377.01.T01:CDS
GGGATAAGCTCAAGAGAAGC+AGG 0.498506 1:-77207374 MsG0180004377.01.T01:CDS
TGAAGATATGGGCATACCTT+GGG 0.500114 1:-77200331 MsG0180004377.01.T01:CDS
TCCAGGATCAAACTTCTTGA+CGG 0.500862 1:+77200269 None:intergenic
GCCGTCAAGAAGTTTGATCC+TGG 0.503459 1:-77200270 MsG0180004377.01.T01:CDS
CCATGGAGCAGTGGCCTGGA+AGG 0.506677 1:-77208018 MsG0180004377.01.T01:CDS
ATTGACATCTGAGGCAAAGC+AGG 0.507708 1:+77208563 None:intergenic
ACACCTTCTTTCCAATCGGC+TGG 0.509909 1:-77209065 MsG0180004377.01.T01:CDS
GACAGTACCATTCTCATTCA+CGG 0.510075 1:+77207955 None:intergenic
AACTTTGGCCAGACACAACC+TGG 0.510599 1:-77209026 MsG0180004377.01.T01:intron
AACTTACTACTGTGTGACTA+AGG 0.511110 1:-77201371 MsG0180004377.01.T01:intron
GGACAAATGATCAACGCCCT+TGG 0.512561 1:+77208040 None:intergenic
CTTCTGATGACAAACCGATC+GGG 0.515089 1:-77200098 MsG0180004377.01.T01:CDS
GTACGAAGCATGCATCCAAT+GGG 0.517463 1:-77206722 MsG0180004377.01.T01:CDS
CAGATGTCAATTGGTCGAGT+TGG 0.518776 1:-77208551 MsG0180004377.01.T01:CDS
TTGCCTGCACCCTTGATCAA+GGG 0.518780 1:-77200032 MsG0180004377.01.T01:CDS
CCTTGGGAAATCGCTAAGCT+TGG 0.519071 1:-77200315 MsG0180004377.01.T01:CDS
CCTAAGCTTCTAGTTGTTGG+CGG 0.520168 1:-77200066 MsG0180004377.01.T01:CDS
TCTTCATCATCACTAAAGAA+TGG 0.520226 1:+77208112 None:intergenic
GGCGTTGATCATTTGTCCCA+TGG 0.521200 1:-77208035 MsG0180004377.01.T01:CDS
TGGAGTTCGTCAGGGTATGT+GGG 0.522164 1:-77200295 MsG0180004377.01.T01:CDS
ATTCAAGAGTGTGAGGTCAC+TGG 0.523985 1:-77201585 MsG0180004377.01.T01:CDS
CATGTCAAGGACTTTGTCGT+TGG 0.524179 1:-77206498 MsG0180004377.01.T01:CDS
TTGATCAAGGGTGCAGGCAA+GGG 0.525896 1:+77200035 None:intergenic
TCAAGGACTTTGTCGTTGGA+AGG 0.528854 1:-77206494 MsG0180004377.01.T01:CDS
CAGTGGGCACAGAGCTGGTG+AGG 0.530438 1:-77206652 MsG0180004377.01.T01:CDS
AAGAAACCTCCTGTTGGACA+AGG 0.532888 1:-77206360 MsG0180004377.01.T01:CDS
TCATTCCTAGGGAAAATCCA+AGG 0.533348 1:-77208057 MsG0180004377.01.T01:CDS
GATGCATGCTTCGTACGTAC+AGG 0.536543 1:+77206729 None:intergenic
TACACCTCCGTGAATGAGAA+TGG 0.536980 1:-77207962 MsG0180004377.01.T01:intron
AGGAAAAGGTACCAGCCGAT+TGG 0.537215 1:+77209054 None:intergenic
TTAGGTATGCTTCTCCCGAT+CGG 0.542706 1:+77200084 None:intergenic
GGTCACTAGCCCTTGATCAA+GGG 0.548340 1:+77200023 None:intergenic
AAAGCAGGAAGTGTTCAAAT+GGG 0.549080 1:+77208578 None:intergenic
CGTACGAAGCATGCATCCAA+TGG 0.549638 1:-77206723 MsG0180004377.01.T01:CDS
CACTAATGCCAAAGCTGCGA+CGG 0.551023 1:-77206593 MsG0180004377.01.T01:CDS
AGTGATAGAGAATATATCAT+AGG 0.553664 1:-77201418 MsG0180004377.01.T01:CDS
GGTGTATCTATCCTTAAAAG+AGG 0.554469 1:+77207979 None:intergenic
GGGATGATGAGTTTCGGTCG+AGG 0.555696 1:-77201638 MsG0180004377.01.T01:CDS
TAGCCCTTGATCAAGGGTGC+AGG 0.555894 1:+77200029 None:intergenic
ACACTCAGTGGGCACAGAGC+TGG 0.558567 1:-77206657 MsG0180004377.01.T01:CDS
AAGGGTGCAGGCAAGGGCAA+TGG 0.563247 1:+77200041 None:intergenic
TCATTTGTCCCATGGAGCAG+TGG 0.564174 1:-77208027 MsG0180004377.01.T01:CDS
TGATGAGTTTCGGTCGAGGT+GGG 0.565414 1:-77201634 MsG0180004377.01.T01:CDS
GACGGTTTGGAAAATTCGGA+AGG 0.568472 1:-77199975 MsG0180004377.01.T01:CDS
AAGAAATCCCTAACCAACTC+AGG 0.569522 1:+77201663 None:intergenic
ACACTTCACATGAAGTCAGC+TGG 0.570067 1:+77200367 None:intergenic
TCGTGAGGTGATTGTATACA+TGG 0.570815 1:-77206391 MsG0180004377.01.T01:CDS
TGTCTGGCCAAAGTTGCTAA+AGG 0.574424 1:+77209034 None:intergenic
CATTCCTAGGGAAAATCCAA+GGG 0.574460 1:-77208056 MsG0180004377.01.T01:CDS
ATGATGAGTTTCGGTCGAGG+TGG 0.576909 1:-77201635 MsG0180004377.01.T01:CDS
ATGTTTGGTCAGAATAATGT+TGG 0.578136 1:-77208861 MsG0180004377.01.T01:CDS
TATTCCAAATACAACCGCCT+TGG 0.579315 1:+77200002 None:intergenic
TCTCTATCACTGCAAAAGAA+GGG 0.579682 1:+77201430 None:intergenic
TTCAGCCCTTGTCCAACAGG+AGG 0.580774 1:+77206354 None:intergenic
AGACTCGACCGGTAACCTGT+TGG 0.583874 1:-77200139 MsG0180004377.01.T01:CDS
GCTAAGGAAAGAGCTGAACC+AGG 0.589537 1:-77206531 MsG0180004377.01.T01:CDS
GATTCAAAGAAACCTCCTGT+TGG 0.591139 1:-77206366 MsG0180004377.01.T01:CDS
TCTTCTGATGACAAACCGAT+CGG 0.596047 1:-77200099 MsG0180004377.01.T01:CDS
GGTTTGGAAAATTCGGAAGG+AGG 0.596932 1:-77199972 MsG0180004377.01.T01:CDS
AGGATTCTGCAGTCATGTCA+AGG 0.601362 1:-77206511 MsG0180004377.01.T01:CDS
TGCTAGAGATACCATATGAA+CGG 0.603537 1:+77208517 None:intergenic
ACGATTGTTAAACTGAACAA+TGG 0.611463 1:+77206410 None:intergenic
TACCATATGAACGGAAGGAG+TGG 0.612064 1:+77208526 None:intergenic
AGAGATACCATATGAACGGA+AGG 0.613567 1:+77208521 None:intergenic
TGAAGATGCGAGTCCTGAGT+TGG 0.613594 1:-77201676 MsG0180004377.01.T01:CDS
CCAAGCTTAGCGATTTCCCA+AGG 0.615945 1:+77200315 None:intergenic
GATGGTGCAGTGGGTGCGCA+AGG 0.620411 1:-77201556 MsG0180004377.01.T01:intron
CAGGTACCAAACCCAACGAT+AGG 0.622891 1:-77207355 MsG0180004377.01.T01:CDS
ACGTACGTATAAGAAAGAAA+GGG 0.623052 1:-77200244 MsG0180004377.01.T01:CDS
TGTTCAGTTTAACAATCGTG+AGG 0.624585 1:-77206406 MsG0180004377.01.T01:CDS
CTGGAACAATGATGGTGCAG+TGG 0.625357 1:-77201566 MsG0180004377.01.T01:CDS
AGCTGAAAATGGTGTTGTCA+AGG 0.628588 1:-77206766 MsG0180004377.01.T01:CDS
TGAGGTCACTGGAACAATGA+TGG 0.628803 1:-77201574 MsG0180004377.01.T01:CDS
AGATCTGTGGAAGACTCGAC+CGG 0.630222 1:-77200150 MsG0180004377.01.T01:CDS
TTATTAGCACATGCTGACAA+TGG 0.637025 1:+77200210 None:intergenic
TGATCAAGGGCTAGTGACCA+AGG 0.638516 1:-77200019 MsG0180004377.01.T01:CDS
AGACCATTCTCTGCAAAAGG+CGG 0.640474 1:-77206691 MsG0180004377.01.T01:CDS
ACCGTTCTACTGCGATACTG+TGG 0.641157 1:+77201702 None:intergenic
TTCAACTATTCAAGAGTGTG+AGG 0.641287 1:-77201592 MsG0180004377.01.T01:CDS
ACCACAGTATCGCAGTAGAA+CGG 0.641569 1:-77201703 MsG0180004377.01.T01:CDS
TGGAACAATGATGGTGCAGT+GGG 0.643324 1:-77201565 MsG0180004377.01.T01:CDS
AGAAACCTCCTGTTGGACAA+GGG 0.643332 1:-77206359 MsG0180004377.01.T01:CDS
GTTCTACTGCGATACTGTGG+TGG 0.646637 1:+77201705 None:intergenic
GGAGTTCGTCAGGGTATGTG+GGG 0.647398 1:-77200294 MsG0180004377.01.T01:CDS
GCTGCCATTGTGTATGAACA+TGG 0.647605 1:-77206630 MsG0180004377.01.T01:CDS
AAAGAAGGTGTAGATTGGAA+AGG 0.648011 1:+77209077 None:intergenic
AGATACTCCAACCACACCAA+AGG 0.655834 1:-77208092 MsG0180004377.01.T01:CDS
AGGGCTGAATAAGCCTGCTG+AGG 0.658660 1:-77206340 MsG0180004377.01.T01:intron
AGCTCCATGTTCATACACAA+TGG 0.660594 1:+77206626 None:intergenic
GATATGTACAAGACACTCAG+TGG 0.662232 1:-77206669 MsG0180004377.01.T01:CDS
ACATGCTGACAATGGAACGC+CGG 0.666475 1:+77200218 None:intergenic
TGGGTGTGACAGATGTACGA+GGG 0.667447 1:-77206446 MsG0180004377.01.T01:CDS
ACTCGACCAATTGACATCTG+AGG 0.669172 1:+77208554 None:intergenic
GCTAAGCTTGGAGTTCGTCA+GGG 0.670012 1:-77200303 MsG0180004377.01.T01:CDS
TGCTGATTACGTGAGATCTG+TGG 0.675039 1:-77200163 MsG0180004377.01.T01:CDS
TTGTATTTGGAATAGCCCGA+CGG 0.676217 1:-77199993 MsG0180004377.01.T01:CDS
ATATGTACAAGACACTCAGT+GGG 0.677051 1:-77206668 MsG0180004377.01.T01:CDS
AAGGGCATCAGCCTTTGGTG+TGG 0.679934 1:+77208081 None:intergenic
TTGGGTGTGACAGATGTACG+AGG 0.689369 1:-77206447 MsG0180004377.01.T01:CDS
AGATTGGAAAGGTGTTGACA+TGG 0.692451 1:+77209088 None:intergenic
TGAACATGGAGCTGATGTTG+AGG 0.697244 1:-77206616 MsG0180004377.01.T01:CDS
ACCCAACGATAGGACCACCT+CGG 0.699651 1:-77207345 MsG0180004377.01.T01:CDS
GCCGCCAATTCATGAATACG+AGG 0.700929 1:+77206552 None:intergenic
CAACGATAGGACCACCTCGG+AGG 0.708362 1:-77207342 MsG0180004377.01.T01:CDS
TGTGCAACCATAGAACTCTG+GGG 0.753701 1:+77208618 None:intergenic
TCAAGGGCTAGTGACCAAGG+CGG 0.799326 1:-77200016 MsG0180004377.01.T01:CDS
AGTACCATTCTCATTCACGG+AGG 0.817913 1:+77207958 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAATTATAGTC+TGG - Chr1:77206493-77206512 MsG0180004377.01.T01:CDS 10.0%
!! TAATAGCTAATATATTAAAT+AGG + Chr1:77207983-77208002 None:intergenic 10.0%
!! TTGTAAAATAGAATTTAAAT+AGG + Chr1:77206829-77206848 None:intergenic 10.0%
!! TTTATTACTATTACTATTAT+TGG + Chr1:77206944-77206963 None:intergenic 10.0%
!!! AAATTATTATATACCTTTTT+TGG - Chr1:77200263-77200282 MsG0180004377.01.T01:CDS 10.0%
!!! AATTATTATATACCTTTTTT+GGG - Chr1:77200264-77200283 MsG0180004377.01.T01:CDS 10.0%
!! AATAAAATGCTAAAATGTAT+AGG + Chr1:77201483-77201502 None:intergenic 15.0%
!! AATAATAATTCAATGAAATC+AGG + Chr1:77206301-77206320 None:intergenic 15.0%
!! AATGAAATCCTATTAAAAAT+GGG - Chr1:77205021-77205040 MsG0180004377.01.T01:intron 15.0%
!! ATAAAATGCTAAAATGTATA+GGG + Chr1:77201482-77201501 None:intergenic 15.0%
!! ATAATTTAAGCAACTAAAAT+TGG + Chr1:77206376-77206395 None:intergenic 15.0%
!! ATATGACATTATATTATGTA+AGG + Chr1:77203593-77203612 None:intergenic 15.0%
!! ATGCATAATAGTATTAATTA+GGG + Chr1:77201998-77202017 None:intergenic 15.0%
!! CTTATTAATTTAAGTAATTG+TGG - Chr1:77208594-77208613 MsG0180004377.01.T01:CDS 15.0%
!! GTTTAAATTATTGAAAATGT+TGG - Chr1:77206882-77206901 MsG0180004377.01.T01:intron 15.0%
!! TATGACATTATATTATGTAA+GGG + Chr1:77203592-77203611 None:intergenic 15.0%
!! TATGATTATGATTTAGAAAT+GGG - Chr1:77205265-77205284 MsG0180004377.01.T01:intron 15.0%
!! TTAAGAAAGAATATAGTTTA+AGG - Chr1:77204800-77204819 MsG0180004377.01.T01:intron 15.0%
!! TTATGATTATGATTTAGAAA+TGG - Chr1:77205264-77205283 MsG0180004377.01.T01:intron 15.0%
!! TTTATATAGATTTACAGTTT+GGG - Chr1:77203134-77203153 MsG0180004377.01.T01:intron 15.0%
!!! AATGTTTTTTTTTTTTTACC+TGG - Chr1:77200386-77200405 MsG0180004377.01.T01:CDS 15.0%
!!! ATATTTTTTATCTATTACCT+TGG + Chr1:77204531-77204550 None:intergenic 15.0%
!!! CACTATTTAAATATTGATTT+AGG - Chr1:77206852-77206871 MsG0180004377.01.T01:intron 15.0%
!!! CATTTTACATTTATTTTAGT+AGG - Chr1:77206969-77206988 MsG0180004377.01.T01:intron 15.0%
!!! CTATTTAATAAATTTTAACG+AGG - Chr1:77204457-77204476 MsG0180004377.01.T01:intron 15.0%
!!! TATAATGTCATATTTTAATG+AGG - Chr1:77203600-77203619 MsG0180004377.01.T01:intron 15.0%
!!! TTTATAATATTTTCATGAGT+AGG - Chr1:77204667-77204686 MsG0180004377.01.T01:intron 15.0%
!!! TTTTATATAGATTTACAGTT+TGG - Chr1:77203133-77203152 MsG0180004377.01.T01:intron 15.0%
!! AAATAAGTTTATGGCAAAAT+AGG + Chr1:77201536-77201555 None:intergenic 20.0%
!! AACTTAATCAACTAAAACAA+AGG - Chr1:77203746-77203765 MsG0180004377.01.T01:intron 20.0%
!! AATACTGAAAAACAAATCTT+GGG + Chr1:77201207-77201226 None:intergenic 20.0%
!! AATTTAGTTGCTAAAATTGT+AGG + Chr1:77207271-77207290 None:intergenic 20.0%
!! ACAATTTACAAAAGTCATAA+AGG + Chr1:77202051-77202070 None:intergenic 20.0%
!! ATAAGGAAATATAAGAATGA+GGG - Chr1:77200824-77200843 MsG0180004377.01.T01:intron 20.0%
!! ATATTCTTTCTTAAATACAC+AGG + Chr1:77204794-77204813 None:intergenic 20.0%
!! ATCTCAATAAAAAAATGGTT+AGG - Chr1:77205161-77205180 MsG0180004377.01.T01:intron 20.0%
!! ATTTAGTTGCTAAAATTGTA+GGG + Chr1:77207270-77207289 None:intergenic 20.0%
!! CAAGTAATAATTAAAATCCA+AGG - Chr1:77204511-77204530 MsG0180004377.01.T01:intron 20.0%
!! CAATGAAATCCTATTAAAAA+TGG - Chr1:77205020-77205039 MsG0180004377.01.T01:intron 20.0%
!! CATGCATAATAGTATTAATT+AGG + Chr1:77201999-77202018 None:intergenic 20.0%
!! CTCTATCATATTAAAAAACA+AGG - Chr1:77205093-77205112 MsG0180004377.01.T01:intron 20.0%
!! TAAGAATTTAATGATTCCTT+TGG + Chr1:77208578-77208597 None:intergenic 20.0%
!! TATAAGGAAATATAAGAATG+AGG - Chr1:77200823-77200842 MsG0180004377.01.T01:intron 20.0%
!! TCATTCTTATATTTCCTTAT+AGG + Chr1:77200824-77200843 None:intergenic 20.0%
!!! AAATGTTTTGACAAAAAAAC+TGG - Chr1:77202751-77202770 MsG0180004377.01.T01:intron 20.0%
!!! AACTTCTGTAAATGATTTTA+GGG - Chr1:77202258-77202277 MsG0180004377.01.T01:intron 20.0%
!!! AATGTTTTGACAAAAAAACT+GGG - Chr1:77202752-77202771 MsG0180004377.01.T01:intron 20.0%
!!! ATATCTTGAATGTAATTTTC+AGG - Chr1:77201657-77201676 MsG0180004377.01.T01:CDS 20.0%
!!! ATTCTGTTTATTTTTTAAGC+TGG - Chr1:77200593-77200612 MsG0180004377.01.T01:intron 20.0%
!!! ATTGATCAGTCATTTAAAAT+TGG + Chr1:77202188-77202207 None:intergenic 20.0%
!!! CAATTCATTTTTCTTAATCT+TGG - Chr1:77208316-77208335 MsG0180004377.01.T01:intron 20.0%
!!! CATTACTGTGATTATTTTTT+TGG + Chr1:77204600-77204619 None:intergenic 20.0%
!!! CATTTTTTTTCTTTTCTACA+TGG - Chr1:77208548-77208567 MsG0180004377.01.T01:CDS 20.0%
!!! CCTTATTTTGTAAAAAACTT+CGG - Chr1:77201604-77201623 MsG0180004377.01.T01:CDS 20.0%
!!! CTAGATTTTATTCCTTTATT+AGG - Chr1:77201243-77201262 MsG0180004377.01.T01:intron 20.0%
!!! CTGAAGTTTTTAAACAAATT+TGG + Chr1:77204380-77204399 None:intergenic 20.0%
!!! CTTGGATTTTAATTATTACT+TGG + Chr1:77204513-77204532 None:intergenic 20.0%
!!! CTTGTTTTTTAATATGATAG+AGG + Chr1:77205095-77205114 None:intergenic 20.0%
!!! GTAGTTTTTTTTGTTATATG+AGG - Chr1:77200864-77200883 MsG0180004377.01.T01:intron 20.0%
!!! GTTACAATTGTTTTATTTCT+TGG - Chr1:77200224-77200243 MsG0180004377.01.T01:CDS 20.0%
!!! TAAATTGTTTCTCTATTTTG+TGG - Chr1:77203060-77203079 MsG0180004377.01.T01:intron 20.0%
!!! TAACTTCTGTAAATGATTTT+AGG - Chr1:77202257-77202276 MsG0180004377.01.T01:intron 20.0%
!!! TAATATTTTTATTCATGGGA+TGG - Chr1:77201759-77201778 MsG0180004377.01.T01:intron 20.0%
!!! TAGTTCAATATTTTAGCTAT+GGG - Chr1:77200050-77200069 MsG0180004377.01.T01:CDS 20.0%
!!! TATCTTGAATGTAATTTTCA+GGG - Chr1:77201658-77201677 MsG0180004377.01.T01:CDS 20.0%
!!! TATTTTGTGTATTAAATAGC+TGG - Chr1:77200134-77200153 MsG0180004377.01.T01:CDS 20.0%
!!! TCATAAACTTTTTTTATTGC+AGG + Chr1:77203256-77203275 None:intergenic 20.0%
!!! TGATCTATGTTAACAAATTT+TGG - Chr1:77201793-77201812 MsG0180004377.01.T01:intron 20.0%
!!! TTAGATTACCCATTTTTAAT+AGG + Chr1:77205032-77205051 None:intergenic 20.0%
!!! TTAGTTCAATATTTTAGCTA+TGG - Chr1:77200049-77200068 MsG0180004377.01.T01:CDS 20.0%
!!! TTGGATTCAATTATCTTTTT+TGG - Chr1:77200321-77200340 MsG0180004377.01.T01:CDS 20.0%
!!! TTTTAATATGATAGAGGATA+TGG + Chr1:77205089-77205108 None:intergenic 20.0%
!!! TTTTCATCACATTGTTATAA+TGG - Chr1:77207838-77207857 MsG0180004377.01.T01:intron 20.0%
!!! TTTTTTGGTTACAAGTATTT+TGG - Chr1:77204720-77204739 MsG0180004377.01.T01:intron 20.0%
! AAAAACACATTTCAAAAGCA+AGG - Chr1:77203915-77203934 MsG0180004377.01.T01:intron 25.0%
! AAAAATATCCCAAAGCAAAA+AGG + Chr1:77203116-77203135 None:intergenic 25.0%
! AAAACACATTTCAAAAGCAA+GGG - Chr1:77203916-77203935 MsG0180004377.01.T01:intron 25.0%
! AAAAGAATAGAGAAGAAAGA+TGG + Chr1:77205570-77205589 None:intergenic 25.0%
! AACATTGTACATATACACAT+TGG + Chr1:77208286-77208305 None:intergenic 25.0%
! AATGATATTAAAAACGAACC+TGG + Chr1:77205942-77205961 None:intergenic 25.0%
! ACATCTTCTTTGATTATCTT+GGG + Chr1:77205418-77205437 None:intergenic 25.0%
! ACTCTATAAAGTCAAAAGAA+TGG + Chr1:77207759-77207778 None:intergenic 25.0%
! ACTGATATAGATCAAAATAG+GGG + Chr1:77207138-77207157 None:intergenic 25.0%
! AGCGTATTAAACTAACTTAT+CGG - Chr1:77207940-77207959 MsG0180004377.01.T01:intron 25.0%
! AGGTCATCTCAATAAAAAAA+TGG - Chr1:77205156-77205175 MsG0180004377.01.T01:intron 25.0%
! AGTGATAGAGAATATATCAT+AGG - Chr1:77207634-77207653 MsG0180004377.01.T01:intron 25.0%
! ATGAGTCAGAAAAATAGATA+TGG + Chr1:77205524-77205543 None:intergenic 25.0%
! ATGTGGTTATTGTTTCATAT+GGG - Chr1:77206024-77206043 MsG0180004377.01.T01:intron 25.0%
! ATTGCTACTATTGTTTAAGA+AGG + Chr1:77205061-77205080 None:intergenic 25.0%
! CAATATTATGGAGAAAATTG+AGG + Chr1:77208454-77208473 None:intergenic 25.0%
! CTCTATAAAGTCAAAAGAAT+GGG + Chr1:77207758-77207777 None:intergenic 25.0%
! GAATACTGAAAAACAAATCT+TGG + Chr1:77201208-77201227 None:intergenic 25.0%
! GACTGATATAGATCAAAATA+GGG + Chr1:77207139-77207158 None:intergenic 25.0%
! GATCTCTTGTTAAATCTTAT+TGG - Chr1:77204245-77204264 MsG0180004377.01.T01:intron 25.0%
! GCATTACTATGATTATGTTT+AGG + Chr1:77204571-77204590 None:intergenic 25.0%
! GCATTCAACTTTATTCATAT+GGG + Chr1:77205306-77205325 None:intergenic 25.0%
! GTTTCATATGAATGATAGAA+CGG - Chr1:77208498-77208517 MsG0180004377.01.T01:intron 25.0%
! TAACATTTGATATGTGAGTT+TGG - Chr1:77204879-77204898 MsG0180004377.01.T01:intron 25.0%
! TAATAGGATTTCATTGAGTT+AGG + Chr1:77205016-77205035 None:intergenic 25.0%
! TACATCTTCTTTGATTATCT+TGG + Chr1:77205419-77205438 None:intergenic 25.0%
! TATTTATCCTAAGTTGTTCT+CGG + Chr1:77206468-77206487 None:intergenic 25.0%
! TGCATTCAACTTTATTCATA+TGG + Chr1:77205307-77205326 None:intergenic 25.0%
! TGTGTACATATTGAAACTAT+CGG - Chr1:77208239-77208258 MsG0180004377.01.T01:intron 25.0%
! TTACAAGAAGGAAAAAAAAC+AGG - Chr1:77204624-77204643 MsG0180004377.01.T01:intron 25.0%
! TTCTCCATAATATTGTTAAC+TGG - Chr1:77208459-77208478 MsG0180004377.01.T01:intron 25.0%
! TTCTTTCACTATGAAGATAT+GGG - Chr1:77208710-77208729 MsG0180004377.01.T01:intron 25.0%
! TTGCTACTATTGTTTAAGAA+GGG + Chr1:77205060-77205079 None:intergenic 25.0%
! TTGTCAAAACATTTATGTTG+AGG + Chr1:77202745-77202764 None:intergenic 25.0%
! TTGTTTATTAAACGATGAAC+TGG + Chr1:77204826-77204845 None:intergenic 25.0%
! TTTACATCACAATAATATCG+TGG + Chr1:77203897-77203916 None:intergenic 25.0%
! TTTCATATGAATGATAGAAC+GGG - Chr1:77208499-77208518 MsG0180004377.01.T01:intron 25.0%
! TTTGCAAAATTTGTGTAAGT+TGG - Chr1:77206172-77206191 MsG0180004377.01.T01:intron 25.0%
!! AAAACATAGTGAGCTTATTT+TGG + Chr1:77201941-77201960 None:intergenic 25.0%
!! AAACTATGATCAACCTTTTT+GGG - Chr1:77200665-77200684 MsG0180004377.01.T01:intron 25.0%
!! AAATATCAATCCTCTTTTCT+AGG - Chr1:77204177-77204196 MsG0180004377.01.T01:intron 25.0%
!! AATTTTACGGATCAATTGAT+TGG + Chr1:77207170-77207189 None:intergenic 25.0%
!! AATTTTCTCAATCTTTTGAG+AGG - Chr1:77208015-77208034 MsG0180004377.01.T01:CDS 25.0%
!! ATTTGCCTTTAGAAATATAG+TGG - Chr1:77205390-77205409 MsG0180004377.01.T01:intron 25.0%
!! GACAATACATTTCATAGTTT+TGG - Chr1:77202993-77203012 MsG0180004377.01.T01:intron 25.0%
!! TTGCAATTACATCTTAGTTT+TGG - Chr1:77201853-77201872 MsG0180004377.01.T01:intron 25.0%
!! TTTGCCTTTAGAAATATAGT+GGG - Chr1:77205391-77205410 MsG0180004377.01.T01:intron 25.0%
!! TTTTAATCAAATGCGTGTTT+GGG - Chr1:77205973-77205992 MsG0180004377.01.T01:intron 25.0%
!! TTTTTCTTAATCTTGGTCAT+TGG - Chr1:77208323-77208342 MsG0180004377.01.T01:intron 25.0%
!!! AGAATAAAAGCACCAAAATA+AGG + Chr1:77202230-77202249 None:intergenic 25.0%
!!! ATTGGATTAGATTTTGTATG+TGG + Chr1:77206926-77206945 None:intergenic 25.0%
!!! CCGAAGTTTTTTACAAAATA+AGG + Chr1:77201607-77201626 None:intergenic 25.0%
!!! GAGATGATTTTTTAGTTGTT+TGG - Chr1:77203500-77203519 MsG0180004377.01.T01:intron 25.0%
!!! GTAGGAAAGATTACTTTTAT+GGG + Chr1:77204022-77204041 None:intergenic 25.0%
!!! GTTACTTTTGTTTGTTAGAA+TGG - Chr1:77207323-77207342 MsG0180004377.01.T01:intron 25.0%
!!! TAGCATAGTAGAATTTTGAT+AGG - Chr1:77208379-77208398 MsG0180004377.01.T01:intron 25.0%
!!! TCAGTATTTTGGTGTTTTTT+TGG - Chr1:77204705-77204724 MsG0180004377.01.T01:intron 25.0%
!!! TGCAATTACATCTTAGTTTT+GGG - Chr1:77201854-77201873 MsG0180004377.01.T01:intron 25.0%
!!! TGTTTTTTTTCCTTCTTGTA+AGG + Chr1:77204625-77204644 None:intergenic 25.0%
!!! TTACATTTATTTTAGTAGGC+CGG - Chr1:77206973-77206992 MsG0180004377.01.T01:intron 25.0%
!!! TTATATTTCTAGTCAACTTG+TGG - Chr1:77208049-77208068 MsG0180004377.01.T01:CDS 25.0%
!!! TTTCTTGTTTTCGATATCTA+AGG + Chr1:77203854-77203873 None:intergenic 25.0%
!!! TTTGACTTGTGTTTTGTAAT+TGG - Chr1:77201506-77201525 MsG0180004377.01.T01:intron 25.0%
AAAGGACATATCAACAAGAT+TGG + Chr1:77203098-77203117 None:intergenic 30.0%
AAATGTAAAACCACCCAAAA+AGG + Chr1:77200681-77200700 None:intergenic 30.0%
AAATTCCTTAACATATGCCT+TGG - Chr1:77205354-77205373 MsG0180004377.01.T01:intron 30.0%
AAGAATTGGAACCAATGAAA+TGG + Chr1:77205602-77205621 None:intergenic 30.0%
AAGATCCATAACAACAACAA+AGG + Chr1:77205727-77205746 None:intergenic 30.0%
AAGCAAACTAATGTATGCTT+TGG - Chr1:77203822-77203841 MsG0180004377.01.T01:intron 30.0%
AATCAAGAAACATCACTTAC+AGG + Chr1:77200563-77200582 None:intergenic 30.0%
AATTATAGTCTGGTATGACT+TGG - Chr1:77206503-77206522 MsG0180004377.01.T01:CDS 30.0%
AATTCCTTAACATATGCCTT+GGG - Chr1:77205355-77205374 MsG0180004377.01.T01:intron 30.0%
ACATGTCCCATATACAATAT+GGG - Chr1:77202963-77202982 MsG0180004377.01.T01:intron 30.0%
ACGATTGTTAAACTGAACAA+TGG + Chr1:77202645-77202664 None:intergenic 30.0%
ACGTACGTATAAGAAAGAAA+GGG - Chr1:77208808-77208827 MsG0180004377.01.T01:intron 30.0%
ACTAAAACAAAGGAAACAGT+AGG - Chr1:77203756-77203775 MsG0180004377.01.T01:intron 30.0%
AGCGAAAATGCTAAATGTAT+AGG + Chr1:77201347-77201366 None:intergenic 30.0%
ATATAAGAATGAGGGATCAA+AGG - Chr1:77200832-77200851 MsG0180004377.01.T01:intron 30.0%
ATGTTTGGTCAGAATAATGT+TGG - Chr1:77200191-77200210 MsG0180004377.01.T01:CDS 30.0%
CAAAGAGCAATAATTTGGTT+AGG - Chr1:77205136-77205155 MsG0180004377.01.T01:intron 30.0%
CAATGGAATATTATCTGCTA+TGG - Chr1:77202157-77202176 MsG0180004377.01.T01:intron 30.0%
CATGTGGTTATTGTTTCATA+TGG - Chr1:77206023-77206042 MsG0180004377.01.T01:intron 30.0%
CCAGTTAAATCAAGAAAAGA+TGG - Chr1:77208662-77208681 MsG0180004377.01.T01:intron 30.0%
CTAACCAAATTATTGCTCTT+TGG + Chr1:77205138-77205157 None:intergenic 30.0%
GAGAAGAAAGATGGTTAAAT+AGG + Chr1:77205561-77205580 None:intergenic 30.0%
GATAAGGATCATTTCATTAG+CGG + Chr1:77205449-77205468 None:intergenic 30.0%
GATACAAGCTGATGTATAAA+GGG - Chr1:77202937-77202956 MsG0180004377.01.T01:intron 30.0%
GATCAATTGATTGGTACAAA+AGG + Chr1:77207161-77207180 None:intergenic 30.0%
GATGCCAGTTAACAATATTA+TGG + Chr1:77208466-77208485 None:intergenic 30.0%
GATGTGAAAAAACAAAGTGA+TGG - Chr1:77203786-77203805 MsG0180004377.01.T01:intron 30.0%
GCGAAAATGCTAAATGTATA+GGG + Chr1:77201346-77201365 None:intergenic 30.0%
GCTAAAATATTGAACTAACC+AGG + Chr1:77200047-77200066 None:intergenic 30.0%
GGACTGATATAGATCAAAAT+AGG + Chr1:77207140-77207159 None:intergenic 30.0%
GTACTCCAAGAATAGTTATT+AGG + Chr1:77205843-77205862 None:intergenic 30.0%
GTTCTTTCACTATGAAGATA+TGG - Chr1:77208709-77208728 MsG0180004377.01.T01:intron 30.0%
TAATATAGATCTACCCGTTT+AGG + Chr1:77208129-77208148 None:intergenic 30.0%
TACAATTAGACCTAGAAAAG+AGG + Chr1:77204190-77204209 None:intergenic 30.0%
TACGTACGTATAAGAAAGAA+AGG - Chr1:77208807-77208826 MsG0180004377.01.T01:intron 30.0%
TATAAGAAAGAAAGGGATTC+CGG - Chr1:77208815-77208834 MsG0180004377.01.T01:intron 30.0%
TATAATGTCATGTTTGTGTG+TGG - Chr1:77200346-77200365 MsG0180004377.01.T01:CDS 30.0%
TCCAAAAGAAACAATTACAG+CGG + Chr1:77203371-77203390 None:intergenic 30.0%
TCTGATATCTAACATGTCTT+TGG - Chr1:77206791-77206810 MsG0180004377.01.T01:intron 30.0%
TCTTCATCATCACTAAAGAA+TGG + Chr1:77200943-77200962 None:intergenic 30.0%
TCTTTATATTTCCCGATTCT+CGG + Chr1:77202796-77202815 None:intergenic 30.0%
TGCTACTATTGTTTAAGAAG+GGG + Chr1:77205059-77205078 None:intergenic 30.0%
TGGAAAAATCAATAGAGCAT+TGG + Chr1:77203310-77203329 None:intergenic 30.0%
TGTATCATATGATCCCAATA+AGG - Chr1:77202854-77202873 MsG0180004377.01.T01:intron 30.0%
TGTATTCACTCTTATCCTTT+CGG - Chr1:77205657-77205676 MsG0180004377.01.T01:intron 30.0%
TGTGGTTATTGTTTCATATG+GGG - Chr1:77206025-77206044 MsG0180004377.01.T01:intron 30.0%
TTAATTATCCATGGACACTA+TGG + Chr1:77207804-77207823 None:intergenic 30.0%
TTGAGCCTAATAACTATTCT+TGG - Chr1:77205835-77205854 MsG0180004377.01.T01:intron 30.0%
TTTAATCAAATGCGTGTTTG+GGG - Chr1:77205974-77205993 MsG0180004377.01.T01:intron 30.0%
TTTGGAAAGAAAGCAAAGAA+TGG + Chr1:77203971-77203990 None:intergenic 30.0%
! AAGGTTGATCATCTTAATGT+TGG + Chr1:77204134-77204153 None:intergenic 30.0%
! ATTTTCCCTAGGAATGAAAA+GGG + Chr1:77200992-77201011 None:intergenic 30.0%
! CAAACTATGATCAACCTTTT+TGG - Chr1:77200664-77200683 MsG0180004377.01.T01:intron 30.0%
! CCATCTTTTCTTGATTTAAC+TGG + Chr1:77208665-77208684 None:intergenic 30.0%
! CTGGTCTTTATACCTAATAA+AGG + Chr1:77201258-77201277 None:intergenic 30.0%
! CTTTTAATCAAATGCGTGTT+TGG - Chr1:77205972-77205991 MsG0180004377.01.T01:intron 30.0%
! GATCGAGAATGTTCAAATTT+TGG - Chr1:77207209-77207228 MsG0180004377.01.T01:intron 30.0%
! TAGTAGGCTTAAAAGCTTTT+TGG - Chr1:77206998-77207017 MsG0180004377.01.T01:intron 30.0%
! TATTTCCGTTGTCTTTTAAC+TGG - Chr1:77203173-77203192 MsG0180004377.01.T01:intron 30.0%
! TGATATGTCCTTTTTGCTTT+GGG - Chr1:77203105-77203124 MsG0180004377.01.T01:intron 30.0%
! TGGATGTTTTATGTTTGACA+GGG - Chr1:77200406-77200425 MsG0180004377.01.T01:CDS 30.0%
! TGTTCAAATGGGTTTGTAAT+GGG + Chr1:77200466-77200485 None:intergenic 30.0%
! TTGATATGTCCTTTTTGCTT+TGG - Chr1:77203104-77203123 MsG0180004377.01.T01:intron 30.0%
! TTGCCTTTAGAAATATAGTG+GGG - Chr1:77205392-77205411 MsG0180004377.01.T01:intron 30.0%
! TTGTTGTTGTTATGGATCTT+GGG - Chr1:77205727-77205746 MsG0180004377.01.T01:intron 30.0%
!! AAACTCTGAAATTCTTAAGC+GGG + Chr1:77204283-77204302 None:intergenic 30.0%
!! AATTCTACTATGCTAGCTTT+CGG + Chr1:77208374-77208393 None:intergenic 30.0%
!! ATCATCTTAATGTTGGTTCA+AGG + Chr1:77204127-77204146 None:intergenic 30.0%
!! CAAAATTTGTGTAAGTTGGT+TGG - Chr1:77206176-77206195 MsG0180004377.01.T01:intron 30.0%
!! CAAACTCTGAAATTCTTAAG+CGG + Chr1:77204284-77204303 None:intergenic 30.0%
!! GAATTCCTTTGTTGTTGTTA+TGG - Chr1:77205719-77205738 MsG0180004377.01.T01:intron 30.0%
!! GGTAGGAAAGATTACTTTTA+TGG + Chr1:77204023-77204042 None:intergenic 30.0%
!! TCATCTTAATGTTGGTTCAA+GGG + Chr1:77204126-77204145 None:intergenic 30.0%
!! TTTGTTGTTGTTATGGATCT+TGG - Chr1:77205726-77205745 MsG0180004377.01.T01:intron 30.0%
AAAGCAATTGAACTATGACC+TGG - Chr1:77206654-77206673 MsG0180004377.01.T01:CDS 35.0%
AACCAATGAAATGGAAACAG+AGG + Chr1:77205593-77205612 None:intergenic 35.0%
AACTTACTACTGTGTGACTA+AGG - Chr1:77207681-77207700 MsG0180004377.01.T01:intron 35.0%
AAGATAACAGCAATCCAAAG+TGG + Chr1:77205775-77205794 None:intergenic 35.0%
AATAAGGAGAATGGAAGTTC+AGG - Chr1:77202870-77202889 MsG0180004377.01.T01:intron 35.0%
ACGATTCCTCAATTTCCTAT+TGG - Chr1:77205472-77205491 MsG0180004377.01.T01:intron 35.0%
ATAAGGAGAATGGAAGTTCA+GGG - Chr1:77202871-77202890 MsG0180004377.01.T01:intron 35.0%
ATATCATAGGTCGTCGAATT+TGG - Chr1:77207647-77207666 MsG0180004377.01.T01:intron 35.0%
ATATGTACAAGACACTCAGT+GGG - Chr1:77202384-77202403 MsG0180004377.01.T01:intron 35.0%
ATCAAAATAGGGGTGAGAAT+AGG + Chr1:77207128-77207147 None:intergenic 35.0%
ATCTACACCTTCTTTCCAAT+CGG - Chr1:77199983-77200002 MsG0180004377.01.T01:CDS 35.0%
ATTAAAAACGAACCTGGTTG+CGG + Chr1:77205936-77205955 None:intergenic 35.0%
ATTCCTTAACATATGCCTTG+GGG - Chr1:77205356-77205375 MsG0180004377.01.T01:intron 35.0%
ATTTGTGACTATTCCTTCTC+TGG + Chr1:77201277-77201296 None:intergenic 35.0%
ATTTGTGAGTATTCCTTCTC+TGG + Chr1:77201413-77201432 None:intergenic 35.0%
CAATTGACATGTCCATAGAA+GGG + Chr1:77207719-77207738 None:intergenic 35.0%
CAGTAATGTACCTTACAAGA+AGG - Chr1:77204612-77204631 MsG0180004377.01.T01:intron 35.0%
CATAGTCTAGAGAAAGTGAT+TGG + Chr1:77204765-77204784 None:intergenic 35.0%
CATCATTTGTACCAATTGCA+AGG + Chr1:77208427-77208446 None:intergenic 35.0%
CCATGGATAATTAACCAACT+AGG - Chr1:77207810-77207829 MsG0180004377.01.T01:intron 35.0%
CCTAGTTGGTTAATTATCCA+TGG + Chr1:77207813-77207832 None:intergenic 35.0%
CCTATTTAGCTAAACAGATC+AGG + Chr1:77207034-77207053 None:intergenic 35.0%
CCTGATCTGTTTAGCTAAAT+AGG - Chr1:77207031-77207050 MsG0180004377.01.T01:intron 35.0%
CGATTCCTCAATTTCCTATT+GGG - Chr1:77205473-77205492 MsG0180004377.01.T01:intron 35.0%
CGCTTAAGAATTTCAGAGTT+TGG - Chr1:77204282-77204301 MsG0180004377.01.T01:intron 35.0%
CTAAAGTGACACTCAATATG+TGG - Chr1:77202134-77202153 MsG0180004377.01.T01:intron 35.0%
CTCACCAAAGAGCAATAATT+TGG - Chr1:77205131-77205150 MsG0180004377.01.T01:intron 35.0%
CTGTCAAACATAAAACATCC+AGG + Chr1:77200407-77200426 None:intergenic 35.0%
CTTCACCAGTTAAAAGACAA+CGG + Chr1:77203181-77203200 None:intergenic 35.0%
CTTGCAATTGGTACAAATGA+TGG - Chr1:77208425-77208444 MsG0180004377.01.T01:intron 35.0%
CTTTGCTTTCTTTCCAAACT+GGG - Chr1:77203973-77203992 MsG0180004377.01.T01:intron 35.0%
GAAACCATAAACCATCTCAA+AGG + Chr1:77204153-77204172 None:intergenic 35.0%
GAACTTCCATTCTCCTTATT+GGG + Chr1:77202870-77202889 None:intergenic 35.0%
GAAGAGTCAAGTTTCCTATA+AGG - Chr1:77200807-77200826 MsG0180004377.01.T01:intron 35.0%
GAATACCCAATAGGAAATTG+AGG + Chr1:77205481-77205500 None:intergenic 35.0%
GACATGTCCCATATACAATA+TGG - Chr1:77202962-77202981 MsG0180004377.01.T01:intron 35.0%
GATCCGTAAAATTGTACAGT+AGG - Chr1:77207177-77207196 MsG0180004377.01.T01:intron 35.0%
GCTAATGTGACACTCAATAT+GGG + Chr1:77201904-77201923 None:intergenic 35.0%
GCTACTATTGTTTAAGAAGG+GGG + Chr1:77205058-77205077 None:intergenic 35.0%
GCTGTAATTGAATACCCAAT+AGG + Chr1:77205490-77205509 None:intergenic 35.0%
GGATACAAGCTGATGTATAA+AGG - Chr1:77202936-77202955 MsG0180004377.01.T01:intron 35.0%
GGTGTATCTATCCTTAAAAG+AGG + Chr1:77201076-77201095 None:intergenic 35.0%
GGTTTACAACACAAAACACA+AGG + Chr1:77207536-77207555 None:intergenic 35.0%
GTTGTTCATGCAATGATTGA+AGG - Chr1:77200087-77200106 MsG0180004377.01.T01:CDS 35.0%
TAAACTGTCAATTACCTGCA+CGG + Chr1:77208167-77208186 None:intergenic 35.0%
TAAAGAGATGCTCAAGAGAA+AGG - Chr1:77202810-77202829 MsG0180004377.01.T01:intron 35.0%
TAATTACACTGTTCTCTTGC+AGG - Chr1:77200915-77200934 MsG0180004377.01.T01:intron 35.0%
TAGGAAATTGAGGAATCGTA+CGG + Chr1:77205471-77205490 None:intergenic 35.0%
TATCATAGGTCGTCGAATTT+GGG - Chr1:77207648-77207667 MsG0180004377.01.T01:intron 35.0%
TATGATACAAACTCAGCACT+TGG + Chr1:77202843-77202862 None:intergenic 35.0%
TATGATCCCAATAAGGAGAA+TGG - Chr1:77202861-77202880 MsG0180004377.01.T01:intron 35.0%
TCAAACTGAACCGTACTAAA+CGG - Chr1:77206543-77206562 MsG0180004377.01.T01:CDS 35.0%
TCACACTTATACCTTGCAAT+TGG - Chr1:77208413-77208432 MsG0180004377.01.T01:intron 35.0%
TCAGAGTTTGGACATAATGA+CGG - Chr1:77204294-77204313 MsG0180004377.01.T01:intron 35.0%
TCATTACCAGCACAAAAACA+TGG + Chr1:77203334-77203353 None:intergenic 35.0%
TCCTCTCCCATATTGTATAT+GGG + Chr1:77202972-77202991 None:intergenic 35.0%
TCTCTATCACTGCAAAAGAA+GGG + Chr1:77207625-77207644 None:intergenic 35.0%
TCTTTGCTTTCTTTCCAAAC+TGG - Chr1:77203972-77203991 MsG0180004377.01.T01:intron 35.0%
TGAACTTCCATTCTCCTTAT+TGG + Chr1:77202871-77202890 None:intergenic 35.0%
TGATGAAAAAGCTACCTAGT+TGG + Chr1:77207827-77207846 None:intergenic 35.0%
TGCTAATGTGACACTCAATA+TGG + Chr1:77201905-77201924 None:intergenic 35.0%
TGCTAGAGATACCATATGAA+CGG + Chr1:77200538-77200557 None:intergenic 35.0%
TGTTCAGTTTAACAATCGTG+AGG - Chr1:77202646-77202665 MsG0180004377.01.T01:intron 35.0%
TTACATTCATAGCTCCACTT+TGG - Chr1:77205758-77205777 MsG0180004377.01.T01:intron 35.0%
TTACTTCGTAGTCATAGCTA+AGG + Chr1:77207557-77207576 None:intergenic 35.0%
TTAGATGATACTTGCGTGTT+CGG - Chr1:77206322-77206341 MsG0180004377.01.T01:intron 35.0%
TTAGGTATAAAGACCAGAGA+AGG - Chr1:77201261-77201280 MsG0180004377.01.T01:intron 35.0%
TTATTAGCACATGCTGACAA+TGG + Chr1:77208845-77208864 None:intergenic 35.0%
TTCCTCTGTTTCCATTTCAT+TGG - Chr1:77205588-77205607 MsG0180004377.01.T01:intron 35.0%
TTCTCTATCACTGCAAAAGA+AGG + Chr1:77207626-77207645 None:intergenic 35.0%
TTGAGATGGTTTATGGTTTC+AGG - Chr1:77204153-77204172 MsG0180004377.01.T01:intron 35.0%
TTGAGTGTCACATTAGCAAA+CGG - Chr1:77201907-77201926 MsG0180004377.01.T01:intron 35.0%
TTGGTATGAGTGAAAGTGAA+TGG - Chr1:77203519-77203538 MsG0180004377.01.T01:intron 35.0%
! AAAGAAGGTGTAGATTGGAA+AGG + Chr1:77199978-77199997 None:intergenic 35.0%
! AACTGGCATCTTAGTGATTT+TGG - Chr1:77208476-77208495 MsG0180004377.01.T01:intron 35.0%
! AAGATGATCAACCTTTGAGA+TGG - Chr1:77204139-77204158 MsG0180004377.01.T01:intron 35.0%
! AAGTTGGTTGGAGAAAAAGA+TGG - Chr1:77206188-77206207 MsG0180004377.01.T01:intron 35.0%
! ACCTTTTCCTTTAGCAACTT+TGG - Chr1:77200011-77200030 MsG0180004377.01.T01:CDS 35.0%
! AGTTGGTTAGGGATTTCTTT+TGG - Chr1:77207393-77207412 MsG0180004377.01.T01:intron 35.0%
! ATACCTAAGCTTCTAGTTGT+TGG - Chr1:77208983-77209002 MsG0180004377.01.T01:intron 35.0%
! ATTGGAAAGAAGGTGTAGAT+TGG + Chr1:77199983-77200002 None:intergenic 35.0%
! CTGGATGTTTTATGTTTGAC+AGG - Chr1:77200405-77200424 MsG0180004377.01.T01:CDS 35.0%
! CTTACGTTTAGAATACAGCA+TGG - Chr1:77201178-77201197 MsG0180004377.01.T01:intron 35.0%
! CTTTGGATTGCTGTTATCTT+CGG - Chr1:77205775-77205794 MsG0180004377.01.T01:intron 35.0%
! GATTTTCCCTAGGAATGAAA+AGG + Chr1:77200993-77201012 None:intergenic 35.0%
! GCGATTGTTGTTATTGTTGT+TGG + Chr1:77205633-77205652 None:intergenic 35.0%
! GTCATTTGGTAACCCAAAAA+AGG + Chr1:77200279-77200298 None:intergenic 35.0%
! GTGCCTACTGTACAATTTTA+CGG + Chr1:77207183-77207202 None:intergenic 35.0%
! GTGTTCAAATGGGTTTGTAA+TGG + Chr1:77200467-77200486 None:intergenic 35.0%
! GTTGGTTAGGGATTTCTTTT+GGG - Chr1:77207394-77207413 MsG0180004377.01.T01:intron 35.0%
! TAGGCTTAAAAGCTTTTTGG+TGG - Chr1:77207001-77207020 MsG0180004377.01.T01:intron 35.0%
! TATGGCAGCATCAGATTTTT+GGG - Chr1:77202587-77202606 MsG0180004377.01.T01:intron 35.0%
! TCTTCAAGTTTCGAATTCCT+TGG - Chr1:77205868-77205887 MsG0180004377.01.T01:intron 35.0%
! TGTTATTGTTGTTGGAAGTG+TGG + Chr1:77205625-77205644 None:intergenic 35.0%
! TTATGGCAGCATCAGATTTT+TGG - Chr1:77202586-77202605 MsG0180004377.01.T01:intron 35.0%
! TTCAACTATTCAAGAGTGTG+AGG - Chr1:77207460-77207479 MsG0180004377.01.T01:intron 35.0%
! TTTTCTACATGGTATGCCAA+AGG - Chr1:77208559-77208578 MsG0180004377.01.T01:CDS 35.0%
!! AAAGCAGGAAGTGTTCAAAT+GGG + Chr1:77200477-77200496 None:intergenic 35.0%
!! AGCTCTGAATCATTAAACCA+AGG + Chr1:77205888-77205907 None:intergenic 35.0%
!! ATATGCTCTAAAGACGTGTT+AGG + Chr1:77206738-77206757 None:intergenic 35.0%
!! TCAACCTTTGAGATGGTTTA+TGG - Chr1:77204146-77204165 MsG0180004377.01.T01:intron 35.0%
!! TCCGCTGTAATTGTTTCTTT+TGG - Chr1:77203367-77203386 MsG0180004377.01.T01:intron 35.0%
!!! TCTTTTGGGATGATGAGTTT+CGG - Chr1:77207408-77207427 MsG0180004377.01.T01:intron 35.0%
!!! TGAGAAAGCATCCTCTTTTA+AGG - Chr1:77201062-77201081 MsG0180004377.01.T01:intron 35.0%
AAGAAATCCCTAACCAACTC+AGG + Chr1:77207392-77207411 None:intergenic 40.0%
ACCAAAATAAGGACTGATGG+AGG + Chr1:77202219-77202238 None:intergenic 40.0%
ACTGCCTCGTATTCATGAAT+TGG - Chr1:77202496-77202515 MsG0180004377.01.T01:intron 40.0%
ACTTGACTCTTCTTTGTGAG+AGG + Chr1:77200799-77200818 None:intergenic 40.0%
AGAAACCTATGGCTTAGCTT+AGG + Chr1:77207091-77207110 None:intergenic 40.0%
AGAGATACCATATGAACGGA+AGG + Chr1:77200534-77200553 None:intergenic 40.0%
AGATATTGCCATAGTGTCCA+TGG - Chr1:77207793-77207812 MsG0180004377.01.T01:intron 40.0%
AGCACCAAAATAAGGACTGA+TGG + Chr1:77202222-77202241 None:intergenic 40.0%
AGCCATAGGTTTCTGTCAAT+CGG - Chr1:77207097-77207116 MsG0180004377.01.T01:intron 40.0%
AGCTCCATGTTCATACACAA+TGG + Chr1:77202429-77202448 None:intergenic 40.0%
ATGAAGATATGGGCATACCT+TGG - Chr1:77208720-77208739 MsG0180004377.01.T01:intron 40.0%
ATGGTCTTCGTTATTCCCAT+TGG + Chr1:77202348-77202367 None:intergenic 40.0%
ATGTCCATAGAAGGGAAACT+GGG + Chr1:77207711-77207730 None:intergenic 40.0%
ATGTGACACTCAATATGGGA+CGG + Chr1:77201900-77201919 None:intergenic 40.0%
ATTAGAGCACGTTAATCTCG+AGG - Chr1:77204209-77204228 MsG0180004377.01.T01:intron 40.0%
ATTAGGCTCAATAGCCCATT+TGG + Chr1:77205826-77205845 None:intergenic 40.0%
ATTGAGGAATCGTACGGATA+AGG + Chr1:77205465-77205484 None:intergenic 40.0%
ATTGTTCTGCTGTTGTTCCT+CGG + Chr1:77205688-77205707 None:intergenic 40.0%
CAGGAGTAAGAAATACCTCT+TGG + Chr1:77206282-77206301 None:intergenic 40.0%
CATTCCTAGGGAAAATCCAA+GGG - Chr1:77200996-77201015 MsG0180004377.01.T01:intron 40.0%
CCGTACTAAACGGTTCAAAA+CGG - Chr1:77206553-77206572 MsG0180004377.01.T01:CDS 40.0%
CCTACATTGGGTTATTTGAG+CGG - Chr1:77206597-77206616 MsG0180004377.01.T01:CDS 40.0%
CGAGAAAAGTCACTGTCATT+TGG + Chr1:77200293-77200312 None:intergenic 40.0%
CTTAACCTAAGCTAAGCCAT+AGG - Chr1:77207083-77207102 MsG0180004377.01.T01:intron 40.0%
GAAAGTGAATGGAAAGTGAG+AGG - Chr1:77203530-77203549 MsG0180004377.01.T01:intron 40.0%
GAATGGGCAACTTAATCTCA+TGG + Chr1:77207742-77207761 None:intergenic 40.0%
GACAGTACCATTCTCATTCA+CGG + Chr1:77201100-77201119 None:intergenic 40.0%
GACGTGTTAGGTATCAGAAT+AGG + Chr1:77206726-77206745 None:intergenic 40.0%
GATATGTACAAGACACTCAG+TGG - Chr1:77202383-77202402 MsG0180004377.01.T01:intron 40.0%
GATTCAAAGAAACCTCCTGT+TGG - Chr1:77202686-77202705 MsG0180004377.01.T01:intron 40.0%
GCAATTGACATGTCCATAGA+AGG + Chr1:77207720-77207739 None:intergenic 40.0%
GCCAAAGTTGCTAAAGGAAA+AGG + Chr1:77200015-77200034 None:intergenic 40.0%
GCTCAAACTCAAAGCATGTT+TGG - Chr1:77200176-77200195 MsG0180004377.01.T01:CDS 40.0%
GCTTAGCTTAGGTTAAGCTT+AGG + Chr1:77207080-77207099 None:intergenic 40.0%
GGATGAGAGAAGAAAGTGAA+AGG - Chr1:77203417-77203436 MsG0180004377.01.T01:intron 40.0%
GTCAGTCTAGTGATGAGAAT+TGG - Chr1:77206437-77206456 MsG0180004377.01.T01:CDS 40.0%
GTCCTCTCCCATATTGTATA+TGG + Chr1:77202973-77202992 None:intergenic 40.0%
GTGAAAGTGAAAAGGGATTG+AGG - Chr1:77206129-77206148 MsG0180004377.01.T01:intron 40.0%
GTGAGAGGAAAGATTGTTGA+AGG - Chr1:77203447-77203466 MsG0180004377.01.T01:intron 40.0%
GTGGAGCTATGAATGTAACA+AGG + Chr1:77205756-77205775 None:intergenic 40.0%
TACAGTAGCAGGTTTGTCTT+GGG + Chr1:77200748-77200767 None:intergenic 40.0%
TACCAGCACAAAAACATGGT+TGG + Chr1:77203330-77203349 None:intergenic 40.0%
TATTCATGAATTGGCGGCTA+AGG - Chr1:77202505-77202524 MsG0180004377.01.T01:intron 40.0%
TATTCCAAATACAACCGCCT+TGG + Chr1:77209053-77209072 None:intergenic 40.0%
TCATTCCTAGGGAAAATCCA+AGG - Chr1:77200995-77201014 MsG0180004377.01.T01:intron 40.0%
TCCAGGATCAAACTTCTTGA+CGG + Chr1:77208786-77208805 None:intergenic 40.0%
TCCCATATACAATATGGGAG+AGG - Chr1:77202968-77202987 MsG0180004377.01.T01:intron 40.0%
TCGTGAGGTGATTGTATACA+TGG - Chr1:77202661-77202680 MsG0180004377.01.T01:intron 40.0%
TCTCATCCAAACAAAGCAAC+AGG + Chr1:77203405-77203424 None:intergenic 40.0%
TCTTCTGATGACAAACCGAT+CGG - Chr1:77208953-77208972 MsG0180004377.01.T01:intron 40.0%
TGAAGATATGGGCATACCTT+GGG - Chr1:77208721-77208740 MsG0180004377.01.T01:intron 40.0%
TGAATGGAAAGTGAGAGGAA+AGG - Chr1:77203535-77203554 MsG0180004377.01.T01:intron 40.0%
TGACACTCAATATGTGGCAA+TGG - Chr1:77202140-77202159 MsG0180004377.01.T01:intron 40.0%
TGGCGTATTTCACTTCTTCA+GGG - Chr1:77208069-77208088 MsG0180004377.01.T01:CDS 40.0%
TTACAGTAGCAGGTTTGTCT+TGG + Chr1:77200749-77200768 None:intergenic 40.0%
TTCATTGAGTTAGGTAGCCA+TGG + Chr1:77205007-77205026 None:intergenic 40.0%
TTCTTATACGTACGTAGTCC+AGG + Chr1:77208803-77208822 None:intergenic 40.0%
TTGGTTGGAGAAAAAGATGG+TGG - Chr1:77206191-77206210 MsG0180004377.01.T01:intron 40.0%
! AGCTTTTAAGCCTACTAGAC+CGG + Chr1:77206995-77207014 None:intergenic 40.0%
! GAACTCAGAGCTCAGTATTT+TGG - Chr1:77204694-77204713 MsG0180004377.01.T01:intron 40.0%
! GAGACAGAAATTTTCATCCC+TGG + Chr1:77203211-77203230 None:intergenic 40.0%
! GTTGAAGGAATGAAAGTGTG+TGG - Chr1:77203462-77203481 MsG0180004377.01.T01:intron 40.0%
! GTTTTGTCCTTTCACTGAAG+CGG - Chr1:77203941-77203960 MsG0180004377.01.T01:intron 40.0%
! TCAAACTGACCCTTCTTTTC+AGG - Chr1:77200722-77200741 MsG0180004377.01.T01:intron 40.0%
! TCTGGTGGTGAAAGTGAAAA+GGG - Chr1:77206122-77206141 MsG0180004377.01.T01:intron 40.0%
! TGAAAGTGTGTGGAAGTGAA+TGG - Chr1:77203472-77203491 MsG0180004377.01.T01:intron 40.0%
! TGATGCCCTTTTCATTCCTA+GGG - Chr1:77200984-77201003 MsG0180004377.01.T01:intron 40.0%
! TGTTGGAAGTGTGGAAGAAT+TGG + Chr1:77205616-77205635 None:intergenic 40.0%
! TTCCGAATTTTCCAAACCGT+CGG + Chr1:77209078-77209097 None:intergenic 40.0%
! TTCTGGTGGTGAAAGTGAAA+AGG - Chr1:77206121-77206140 MsG0180004377.01.T01:intron 40.0%
! TTGTATTTGGAATAGCCCGA+CGG - Chr1:77209059-77209078 MsG0180004377.01.T01:CDS 40.0%
!! ACTGTTTTGTTGAACCTTGG+TGG - Chr1:77201816-77201835 MsG0180004377.01.T01:intron 40.0%
!! AGCTGAAAATGGTGTTGTCA+AGG - Chr1:77202286-77202305 MsG0180004377.01.T01:intron 40.0%
!! CAAAGCAGGAAGTGTTCAAA+TGG + Chr1:77200478-77200497 None:intergenic 40.0%
!! CCGTTTTGAACCGTTTAGTA+CGG + Chr1:77206556-77206575 None:intergenic 40.0%
!! CTATGATCAACCTTTTTGGG+TGG - Chr1:77200668-77200687 MsG0180004377.01.T01:intron 40.0%
!! GATTACTTTTATGGGTCCCA+CGG + Chr1:77204014-77204033 None:intergenic 40.0%
!! GTTATCTTCGGTGTTGTTGT+TGG - Chr1:77205787-77205806 MsG0180004377.01.T01:intron 40.0%
!! TCAGGTGACTAGTTTCTAGT+AGG - Chr1:77204330-77204349 MsG0180004377.01.T01:intron 40.0%
!! TCCTCCATCAGTCCTTATTT+TGG - Chr1:77202215-77202234 MsG0180004377.01.T01:intron 40.0%
!! TGGACTGTTTTGTTGAACCT+TGG - Chr1:77201813-77201832 MsG0180004377.01.T01:intron 40.0%
!! TTCCAACCATGTTTTTGTGC+TGG - Chr1:77203325-77203344 MsG0180004377.01.T01:intron 40.0%
AAAATCCTTTCCGCCCAGTT+TGG + Chr1:77203989-77204008 None:intergenic 45.0%
AAATGTTAACGTGTGCCCCA+AGG + Chr1:77205374-77205393 None:intergenic 45.0%
AACCACTCCTTCCGTTCATA+TGG - Chr1:77200524-77200543 MsG0180004377.01.T01:intron 45.0%
AACTGGTGAAGTTTAGTGCC+AGG - Chr1:77203190-77203209 MsG0180004377.01.T01:intron 45.0%
AAGAAACCTCCTGTTGGACA+AGG - Chr1:77202692-77202711 MsG0180004377.01.T01:intron 45.0%
AAGGCAGAGCAAACCTAAAC+GGG - Chr1:77208113-77208132 MsG0180004377.01.T01:CDS 45.0%
ACACGCATCTGTTGCATATG+TGG - Chr1:77208638-77208657 MsG0180004377.01.T01:intron 45.0%
ACACTTCACATGAAGTCAGC+TGG + Chr1:77208688-77208707 None:intergenic 45.0%
ACCAAGATCTTTCCACAGGT+TGG + Chr1:77204061-77204080 None:intergenic 45.0%
ACCACAGTATCGCAGTAGAA+CGG - Chr1:77207349-77207368 MsG0180004377.01.T01:CDS 45.0%
ACCAGCTTGGATTCAGATGA+TGG - Chr1:77206214-77206233 MsG0180004377.01.T01:intron 45.0%
ACTCGACCAATTGACATCTG+AGG + Chr1:77200501-77200520 None:intergenic 45.0%
ACTGGTGAAGTTTAGTGCCA+GGG - Chr1:77203191-77203210 MsG0180004377.01.T01:intron 45.0%
AGAAACCTCCTGTTGGACAA+GGG - Chr1:77202693-77202712 MsG0180004377.01.T01:intron 45.0%
AGACCATTCTCTGCAAAAGG+CGG - Chr1:77202361-77202380 MsG0180004377.01.T01:intron 45.0%
AGAGTGGAGGATTGATTGTG+GGG + Chr1:77204103-77204122 None:intergenic 45.0%
AGATACTCCAACCACACCAA+AGG - Chr1:77200960-77200979 MsG0180004377.01.T01:intron 45.0%
AGCTAAACAGATCAGGCTAC+TGG + Chr1:77207027-77207046 None:intergenic 45.0%
AGCTGGTAGATGAAGACAGT+TGG - Chr1:77202915-77202934 MsG0180004377.01.T01:intron 45.0%
AGCTTCAAAACCAACCTGGT+TGG - Chr1:77205904-77205923 MsG0180004377.01.T01:intron 45.0%
AGGATTCTGCAGTCATGTCA+AGG - Chr1:77202541-77202560 MsG0180004377.01.T01:intron 45.0%
AGTACCATTCTCATTCACGG+AGG + Chr1:77201097-77201116 None:intergenic 45.0%
AGTCACCTGAGAGATTGAAC+TGG + Chr1:77204320-77204339 None:intergenic 45.0%
ATCCTAAGTTGTTCTCGGCT+TGG + Chr1:77206463-77206482 None:intergenic 45.0%
CAAATGAAGCACAACCACCA+AGG + Chr1:77201833-77201852 None:intergenic 45.0%
CAACACAACACTGACACATG+TGG - Chr1:77206007-77206026 MsG0180004377.01.T01:intron 45.0%
CAAGGCAGAGCAAACCTAAA+CGG - Chr1:77208112-77208131 MsG0180004377.01.T01:CDS 45.0%
CACATGTGTCAGTGTTGTGT+TGG + Chr1:77206009-77206028 None:intergenic 45.0%
CAGATGTCAATTGGTCGAGT+TGG - Chr1:77200501-77200520 MsG0180004377.01.T01:intron 45.0%
CATCCAAACAAAGCAACAGG+TGG + Chr1:77203402-77203421 None:intergenic 45.0%
CATGTCAAGGACTTTGTCGT+TGG - Chr1:77202554-77202573 MsG0180004377.01.T01:intron 45.0%
CATGTCCATAGAAGGGAAAC+TGG + Chr1:77207712-77207731 None:intergenic 45.0%
CCAACATGACTTACCAAGCT+TGG - Chr1:77206248-77206267 MsG0180004377.01.T01:intron 45.0%
CCAAGCTTGGTAAGTCATGT+TGG + Chr1:77206251-77206270 None:intergenic 45.0%
CCGCTCAAATAACCCAATGT+AGG + Chr1:77206600-77206619 None:intergenic 45.0%
CCTGTTGGAGACTGAAAATC+AGG - Chr1:77208928-77208947 MsG0180004377.01.T01:intron 45.0%
CGAAGACCATTCTCTGCAAA+AGG - Chr1:77202358-77202377 MsG0180004377.01.T01:intron 45.0%
CTGTGCAACCATAGAACTCT+GGG + Chr1:77200438-77200457 None:intergenic 45.0%
CTTCTGATGACAAACCGATC+GGG - Chr1:77208954-77208973 MsG0180004377.01.T01:intron 45.0%
GAACAGACACTGCCTACATT+GGG - Chr1:77206585-77206604 MsG0180004377.01.T01:CDS 45.0%
GACCGATTGACAGAAACCTA+TGG + Chr1:77207102-77207121 None:intergenic 45.0%
GAGAGTGGAGGATTGATTGT+GGG + Chr1:77204104-77204123 None:intergenic 45.0%
GCCTCGTATTCATGAATTGG+CGG - Chr1:77202499-77202518 MsG0180004377.01.T01:intron 45.0%
GCTGCCATTGTGTATGAACA+TGG - Chr1:77202422-77202441 MsG0180004377.01.T01:intron 45.0%
GCTTTGCCTCAGATGTCAAT+TGG - Chr1:77200492-77200511 MsG0180004377.01.T01:intron 45.0%
GGAGGATTTCTTACAGTAGC+AGG + Chr1:77200759-77200778 None:intergenic 45.0%
GGTTTGGAAAATTCGGAAGG+AGG - Chr1:77209080-77209099 MsG0180004377.01.T01:CDS 45.0%
GTACGAAGCATGCATCCAAT+GGG - Chr1:77202330-77202349 MsG0180004377.01.T01:intron 45.0%
GTACTGCAAAGTATGCTGCA+TGG - Chr1:77207890-77207909 MsG0180004377.01.T01:intron 45.0%
GTGAAAGGAGAGAAAGTGAG+AGG - Chr1:77203432-77203451 MsG0180004377.01.T01:intron 45.0%
GTGAACCAAGATCTTTCCAC+AGG + Chr1:77204065-77204084 None:intergenic 45.0%
GTGCTAGTGTAGTACTACCA+TGG - Chr1:77204987-77205006 MsG0180004377.01.T01:intron 45.0%
GTGGCGTATTTCACTTCTTC+AGG - Chr1:77208068-77208087 MsG0180004377.01.T01:CDS 45.0%
GTTGGGCTTGGAAACCAAAT+GGG - Chr1:77205809-77205828 MsG0180004377.01.T01:intron 45.0%
TACACCTCCGTGAATGAGAA+TGG - Chr1:77201090-77201109 MsG0180004377.01.T01:intron 45.0%
TACACTGAAGGACCGAGAAT+CGG - Chr1:77202781-77202800 MsG0180004377.01.T01:intron 45.0%
TACCATATGAACGGAAGGAG+TGG + Chr1:77200529-77200548 None:intergenic 45.0%
TACCTTGTTCCTCCATACCA+AGG - Chr1:77208094-77208113 MsG0180004377.01.T01:CDS 45.0%
TATGCCCAGTTTCCCTTCTA+TGG - Chr1:77207704-77207723 MsG0180004377.01.T01:intron 45.0%
TCAAGGACTTTGTCGTTGGA+AGG - Chr1:77202558-77202577 MsG0180004377.01.T01:intron 45.0%
TCAGAGCTTCAAAACCAACC+TGG - Chr1:77205900-77205919 MsG0180004377.01.T01:intron 45.0%
TCCAACCTGTGGAAAGATCT+TGG - Chr1:77204057-77204076 MsG0180004377.01.T01:intron 45.0%
TCCATCATCTGAATCCAAGC+TGG + Chr1:77206218-77206237 None:intergenic 45.0%
TGAACAGACACTGCCTACAT+TGG - Chr1:77206584-77206603 MsG0180004377.01.T01:CDS 45.0%
TGAACATGGAGCTGATGTTG+AGG - Chr1:77202436-77202455 MsG0180004377.01.T01:intron 45.0%
TGAACTAACCAGGTTGTGTC+TGG + Chr1:77200037-77200056 None:intergenic 45.0%
TGACTCTTCTTTGTGAGAGG+TGG + Chr1:77200796-77200815 None:intergenic 45.0%
TGAGGTCACTGGAACAATGA+TGG - Chr1:77207478-77207497 MsG0180004377.01.T01:intron 45.0%
TGCGTGTTCGGTTATCTAGT+TGG - Chr1:77206334-77206353 MsG0180004377.01.T01:intron 45.0%
TGCTTTCTTTCCAAACTGGG+CGG - Chr1:77203976-77203995 MsG0180004377.01.T01:intron 45.0%
TGTCTGGCCAAAGTTGCTAA+AGG + Chr1:77200021-77200040 None:intergenic 45.0%
TGTCTTGGGCCTGAAAAGAA+GGG + Chr1:77200734-77200753 None:intergenic 45.0%
TGTGCAACCATAGAACTCTG+GGG + Chr1:77200437-77200456 None:intergenic 45.0%
TTAGGGACTGCAGCTGAAAA+TGG - Chr1:77202275-77202294 MsG0180004377.01.T01:intron 45.0%
TTAGGTATGCTTCTCCCGAT+CGG + Chr1:77208971-77208990 None:intergenic 45.0%
TTATCCTTTCGGTTTCACCG+AGG - Chr1:77205668-77205687 MsG0180004377.01.T01:intron 45.0%
TTATTCAGCCCTTGTCCAAC+AGG + Chr1:77202704-77202723 None:intergenic 45.0%
TTATTTGAGCGGTTCAACCG+TGG - Chr1:77206608-77206627 MsG0180004377.01.T01:CDS 45.0%
TTCAGTCTCCAACAGGTTAC+CGG + Chr1:77208924-77208943 None:intergenic 45.0%
TTGACATGACTGCAGAATCC+TGG + Chr1:77202542-77202561 None:intergenic 45.0%
TTGTCTTGGGCCTGAAAAGA+AGG + Chr1:77200735-77200754 None:intergenic 45.0%
TTGTTTCATATGGGGCAGTG+TGG - Chr1:77206033-77206052 MsG0180004377.01.T01:intron 45.0%
! ATTCAAGAGTGTGAGGTCAC+TGG - Chr1:77207467-77207486 MsG0180004377.01.T01:intron 45.0%
! ATTGACATCTGAGGCAAAGC+AGG + Chr1:77200492-77200511 None:intergenic 45.0%
! CATACTCTCTTTTTCCTCCG+AGG + Chr1:77201727-77201746 None:intergenic 45.0%
! CATATCAACAAGATTGGCCC+TGG + Chr1:77203092-77203111 None:intergenic 45.0%
! CCTAAGCTTCTAGTTGTTGG+CGG - Chr1:77208986-77209005 MsG0180004377.01.T01:intron 45.0%
! CCTGATTTTCAGTCTCCAAC+AGG + Chr1:77208931-77208950 None:intergenic 45.0%
! CTATTTTGTGGACAGAGCCA+GGG - Chr1:77203072-77203091 MsG0180004377.01.T01:intron 45.0%
! CTGATGCCCTTTTCATTCCT+AGG - Chr1:77200983-77201002 MsG0180004377.01.T01:intron 45.0%
! GACGGTTTGGAAAATTCGGA+AGG - Chr1:77209077-77209096 MsG0180004377.01.T01:CDS 45.0%
! GACTTTTCTCGTACTGTCGT+TGG - Chr1:77200302-77200321 MsG0180004377.01.T01:CDS 45.0%
! GCTGGTAATGAGAACCTTGT+AGG - Chr1:77203343-77203362 MsG0180004377.01.T01:intron 45.0%
! GGGATTGAGGAGTATAGTGA+CGG - Chr1:77206142-77206161 MsG0180004377.01.T01:intron 45.0%
! GGGCCCCACTATATTTCTAA+AGG + Chr1:77205398-77205417 None:intergenic 45.0%
! TATCCGCCTTTTGCAGAGAA+TGG + Chr1:77202367-77202386 None:intergenic 45.0%
! TCAAGCTTTTGTATCCGTGC+AGG - Chr1:77208150-77208169 MsG0180004377.01.T01:intron 45.0%
! TCCGAATTTTCCAAACCGTC+GGG + Chr1:77209077-77209096 None:intergenic 45.0%
! TCTATTTTGTGGACAGAGCC+AGG - Chr1:77203071-77203090 MsG0180004377.01.T01:intron 45.0%
! TGCTGATTACGTGAGATCTG+TGG - Chr1:77208889-77208908 MsG0180004377.01.T01:CDS 45.0%
! TGGAACAATGATGGTGCAGT+GGG - Chr1:77207487-77207506 MsG0180004377.01.T01:intron 45.0%
! TTTTAGTAGGCCGGTCTAGT+AGG - Chr1:77206982-77207001 MsG0180004377.01.T01:intron 45.0%
!! AAAAAGATGGTGGACCAGCT+TGG - Chr1:77206201-77206220 MsG0180004377.01.T01:intron 45.0%
!! AATGTTGGTTCAAGGGAGAG+TGG + Chr1:77204119-77204138 None:intergenic 45.0%
!! ATGAAAAGGGCATCAGCCTT+TGG + Chr1:77200979-77200998 None:intergenic 45.0%
!! CTTCGGTGTTGTTGTTGGTT+GGG - Chr1:77205792-77205811 MsG0180004377.01.T01:intron 45.0%
!! TCTTCGGTGTTGTTGTTGGT+TGG - Chr1:77205791-77205810 MsG0180004377.01.T01:intron 45.0%
!! TTGCCACCTGTTGCTTTGTT+TGG - Chr1:77203396-77203415 MsG0180004377.01.T01:intron 45.0%
!! AAAAAAAAAAAACATTTAAT+TGG + Chr1:77200382-77200401 None:intergenic 5.0%
!! AAATTAAAAAAATAAGTTTA+TGG + Chr1:77201545-77201564 None:intergenic 5.0%
!!! ATTAAAAAACAATTTTATTA+TGG - Chr1:77208346-77208365 MsG0180004377.01.T01:intron 5.0%
!!! ATTATTAATATTTTTATTCA+TGG - Chr1:77201754-77201773 MsG0180004377.01.T01:intron 5.0%
!!! TTATTAATATTTTTATTCAT+GGG - Chr1:77201755-77201774 MsG0180004377.01.T01:intron 5.0%
AACTTTGGCCAGACACAACC+TGG - Chr1:77200026-77200045 MsG0180004377.01.T01:CDS 50.0%
ACACCTTCTTTCCAATCGGC+TGG - Chr1:77199987-77200006 MsG0180004377.01.T01:CDS 50.0%
ACACTGAAGGACCGAGAATC+GGG - Chr1:77202782-77202801 MsG0180004377.01.T01:intron 50.0%
ACATGCTGACAATGGAACGC+CGG + Chr1:77208837-77208856 None:intergenic 50.0%
ACCGTTCTACTGCGATACTG+TGG + Chr1:77207353-77207372 None:intergenic 50.0%
ACTGGGCAACAGTACACTGA+AGG - Chr1:77202769-77202788 MsG0180004377.01.T01:intron 50.0%
AGATCTGTGGAAGACTCGAC+CGG - Chr1:77208902-77208921 MsG0180004377.01.T01:CDS 50.0%
ATCCAAACCCGAAACCAAGC+CGG + Chr1:77206688-77206707 None:intergenic 50.0%
ATGATGAGTTTCGGTCGAGG+TGG - Chr1:77207417-77207436 MsG0180004377.01.T01:intron 50.0%
CAATTACAGCGGAGCCTACA+AGG + Chr1:77203360-77203379 None:intergenic 50.0%
CACTAATGCCAAAGCTGCGA+CGG - Chr1:77202459-77202478 MsG0180004377.01.T01:intron 50.0%
CAGGTACCAAACCCAACGAT+AGG - Chr1:77201697-77201716 MsG0180004377.01.T01:CDS 50.0%
CATGTCACGTGCAGTTCTTC+TGG - Chr1:77206104-77206123 MsG0180004377.01.T01:intron 50.0%
CCAAGCTTAGCGATTTCCCA+AGG + Chr1:77208740-77208759 None:intergenic 50.0%
CCACTTCAGCGTTTACAAGC+TGG - Chr1:77202898-77202917 MsG0180004377.01.T01:intron 50.0%
CCAGCTTGTAAACGCTGAAG+TGG + Chr1:77202901-77202920 None:intergenic 50.0%
CCGCCAACAACTAGAAGCTT+AGG + Chr1:77208989-77209008 None:intergenic 50.0%
CCTTGGGAAATCGCTAAGCT+TGG - Chr1:77208737-77208756 MsG0180004377.01.T01:intron 50.0%
CGTACGAAGCATGCATCCAA+TGG - Chr1:77202329-77202348 MsG0180004377.01.T01:intron 50.0%
CTATGACCTGGAGTTCTCAC+CGG - Chr1:77206666-77206685 MsG0180004377.01.T01:CDS 50.0%
CTCGAACCTGGACAAAACCA+CGG + Chr1:77206628-77206647 None:intergenic 50.0%
GACTTACCAAGCTTGGCGTA+GGG - Chr1:77206255-77206274 MsG0180004377.01.T01:intron 50.0%
GACTTTGTCGTTGGAAGGCA+AGG - Chr1:77202563-77202582 MsG0180004377.01.T01:intron 50.0%
GAGGTGGCGAGAAGTCAATA+AGG + Chr1:77200780-77200799 None:intergenic 50.0%
GATGCATGCTTCGTACGTAC+AGG + Chr1:77202326-77202345 None:intergenic 50.0%
GATGCTCAAGAGAAAGGCTG+AGG - Chr1:77202816-77202835 MsG0180004377.01.T01:intron 50.0%
GCCGCCAATTCATGAATACG+AGG + Chr1:77202503-77202522 None:intergenic 50.0%
GCCGTCAAGAAGTTTGATCC+TGG - Chr1:77208782-77208801 MsG0180004377.01.T01:intron 50.0%
GCTAAGCTTGGAGTTCGTCA+GGG - Chr1:77208749-77208768 MsG0180004377.01.T01:intron 50.0%
GCTAAGGAAAGAGCTGAACC+AGG - Chr1:77202521-77202540 MsG0180004377.01.T01:intron 50.0%
GCTGTGCAACCATAGAACTC+TGG + Chr1:77200439-77200458 None:intergenic 50.0%
GCTTTCTCAGAAGTCCTTCC+AGG + Chr1:77201051-77201070 None:intergenic 50.0%
GGACAAATGATCAACGCCCT+TGG + Chr1:77201015-77201034 None:intergenic 50.0%
GGAGAGTGGAGGATTGATTG+TGG + Chr1:77204105-77204124 None:intergenic 50.0%
GGCTATTCCCCAGAGTTCTA+TGG - Chr1:77200427-77200446 MsG0180004377.01.T01:intron 50.0%
GGGATAAGCTCAAGAGAAGC+AGG - Chr1:77201678-77201697 MsG0180004377.01.T01:CDS 50.0%
GGTCACTAGCCCTTGATCAA+GGG + Chr1:77209032-77209051 None:intergenic 50.0%
GGTTGGGCTTGGAAACCAAA+TGG - Chr1:77205808-77205827 MsG0180004377.01.T01:intron 50.0%
GTACCAGCCGATTGGAAAGA+AGG + Chr1:77199993-77200012 None:intergenic 50.0%
GTCGTTGGAAGGCAAGGTTA+TGG - Chr1:77202569-77202588 MsG0180004377.01.T01:intron 50.0%
GTGACCAAGGCGGTTGTATT+TGG - Chr1:77209046-77209065 MsG0180004377.01.T01:CDS 50.0%
GTGCCCCAAGGCATATGTTA+AGG + Chr1:77205362-77205381 None:intergenic 50.0%
GTGGCGAGAAGTCAATAAGG+AGG + Chr1:77200777-77200796 None:intergenic 50.0%
GTTCTACTGCGATACTGTGG+TGG + Chr1:77207350-77207369 None:intergenic 50.0%
TAATCAGACCGTCGCAGCTT+TGG + Chr1:77202470-77202489 None:intergenic 50.0%
TCATTTGTCCCATGGAGCAG+TGG - Chr1:77201025-77201044 MsG0180004377.01.T01:intron 50.0%
TCTTTCCAAACTGGGCGGAA+AGG - Chr1:77203981-77204000 MsG0180004377.01.T01:intron 50.0%
TGAAGATGCGAGTCCTGAGT+TGG - Chr1:77207376-77207395 MsG0180004377.01.T01:CDS 50.0%
TGACTTACCAAGCTTGGCGT+AGG - Chr1:77206254-77206273 MsG0180004377.01.T01:intron 50.0%
TGATGAGTTTCGGTCGAGGT+GGG - Chr1:77207418-77207437 MsG0180004377.01.T01:intron 50.0%
TGCCTTGGTATGGAGGAACA+AGG + Chr1:77208099-77208118 None:intergenic 50.0%
TGGAGAACCGCTTCAGTGAA+AGG + Chr1:77203951-77203970 None:intergenic 50.0%
TGGAGTTCGTCAGGGTATGT+GGG - Chr1:77208757-77208776 MsG0180004377.01.T01:intron 50.0%
TGGGTGTGACAGATGTACGA+GGG - Chr1:77202606-77202625 MsG0180004377.01.T01:intron 50.0%
TGGTCACTAGCCCTTGATCA+AGG + Chr1:77209033-77209052 None:intergenic 50.0%
TGTGGGGAGGAAAGAAAGTG+AGG + Chr1:77204087-77204106 None:intergenic 50.0%
TGTTCCTCGGTGAAACCGAA+AGG + Chr1:77205675-77205694 None:intergenic 50.0%
TTGCCTGCACCCTTGATCAA+GGG - Chr1:77209020-77209039 MsG0180004377.01.T01:intron 50.0%
TTGGAGTTCGTCAGGGTATG+TGG - Chr1:77208756-77208775 MsG0180004377.01.T01:intron 50.0%
TTGGGTGTGACAGATGTACG+AGG - Chr1:77202605-77202624 MsG0180004377.01.T01:intron 50.0%
TTTGCTCTGCCTTGGTATGG+AGG + Chr1:77208106-77208125 None:intergenic 50.0%
! AACGCCCTTGGATTTTCCCT+AGG + Chr1:77201003-77201022 None:intergenic 50.0%
! ACTCTCTTTTTCCTCCGAGG+TGG + Chr1:77201724-77201743 None:intergenic 50.0%
! AGGTTTGCTCTGCCTTGGTA+TGG + Chr1:77208109-77208128 None:intergenic 50.0%
! CGTTTAGGTTTGCTCTGCCT+TGG + Chr1:77208114-77208133 None:intergenic 50.0%
! CTGGAACAATGATGGTGCAG+TGG - Chr1:77207486-77207505 MsG0180004377.01.T01:intron 50.0%
! GCCCGACGGTTTGGAAAATT+CGG - Chr1:77209073-77209092 MsG0180004377.01.T01:CDS 50.0%
! GTGTTGTTGTTGGTTGGGCT+TGG - Chr1:77205797-77205816 MsG0180004377.01.T01:intron 50.0%
! TAGGGTGCTCTCAACGAACT+TGG + Chr1:77207252-77207271 None:intergenic 50.0%
! TGATCAAGGGCTAGTGACCA+AGG - Chr1:77209033-77209052 MsG0180004377.01.T01:CDS 50.0%
! TGCTTTAAACCGCTCGAACC+TGG + Chr1:77206640-77206659 None:intergenic 50.0%
! TTGATCAAGGGTGCAGGCAA+GGG + Chr1:77209020-77209039 None:intergenic 50.0%
! TTTGGAATAGCCCGACGGTT+TGG - Chr1:77209064-77209083 MsG0180004377.01.T01:CDS 50.0%
!! AGGAAAAGGTACCAGCCGAT+TGG + Chr1:77200001-77200020 None:intergenic 50.0%
!! AGTTCTCACCGGCTTGGTTT+CGG - Chr1:77206677-77206696 MsG0180004377.01.T01:CDS 50.0%
!! ATGCGAGTCCTGAGTTGGTT+AGG - Chr1:77207381-77207400 MsG0180004377.01.T01:intron 50.0%
!! GCGGAAAGGATTTTAGCCGT+GGG - Chr1:77203995-77204014 MsG0180004377.01.T01:intron 50.0%
!! GGCGTTGATCATTTGTCCCA+TGG - Chr1:77201017-77201036 MsG0180004377.01.T01:intron 50.0%
!! TGCGAGTCCTGAGTTGGTTA+GGG - Chr1:77207382-77207401 MsG0180004377.01.T01:intron 50.0%
!! TTGAGGAGTGTTACCTCAGC+AGG + Chr1:77202728-77202747 None:intergenic 50.0%
!!! GTTCAACCGTGGTTTTGTCC+AGG - Chr1:77206619-77206638 MsG0180004377.01.T01:CDS 50.0%
!!! TGGTTTTGTCCAGGTTCGAG+CGG - Chr1:77206628-77206647 MsG0180004377.01.T01:CDS 50.0%
ACCCAACGATAGGACCACCT+CGG - Chr1:77201707-77201726 MsG0180004377.01.T01:CDS 55.0%
AGACTCGACCGGTAACCTGT+TGG - Chr1:77208913-77208932 MsG0180004377.01.T01:intron 55.0%
AGGGCTGAATAAGCCTGCTG+AGG - Chr1:77202712-77202731 MsG0180004377.01.T01:intron 55.0%
CGCTAAGCTTGGAGTTCGTC+AGG - Chr1:77208748-77208767 MsG0180004377.01.T01:intron 55.0%
CTGACAGTGAGTCCAACCTG+TGG - Chr1:77204046-77204065 MsG0180004377.01.T01:intron 55.0%
CTTGCCTGCACCCTTGATCA+AGG - Chr1:77209019-77209038 MsG0180004377.01.T01:intron 55.0%
GACGGCCAGTTCAATCTCTC+AGG - Chr1:77204312-77204331 MsG0180004377.01.T01:intron 55.0%
GGACTCACTGTCAGAGAGGT+AGG + Chr1:77204040-77204059 None:intergenic 55.0%
GGAGTTCGTCAGGGTATGTG+GGG - Chr1:77208758-77208777 MsG0180004377.01.T01:intron 55.0%
GGCCAAGCCGAGAACAACTT+AGG - Chr1:77206458-77206477 MsG0180004377.01.T01:CDS 55.0%
GGGATGATGAGTTTCGGTCG+AGG - Chr1:77207414-77207433 MsG0180004377.01.T01:intron 55.0%
GGTGGTCCTATCGTTGGGTT+TGG + Chr1:77201706-77201725 None:intergenic 55.0%
GGTTGGAATACTCCGCAACC+AGG - Chr1:77205921-77205940 MsG0180004377.01.T01:intron 55.0%
GGTTGGACTCACTGTCAGAG+AGG + Chr1:77204044-77204063 None:intergenic 55.0%
GTCACGTGCAGTTCTTCTGG+TGG - Chr1:77206107-77206126 MsG0180004377.01.T01:intron 55.0%
GTGGAGGATTGATTGTGGGG+AGG + Chr1:77204100-77204119 None:intergenic 55.0%
TCCGAGGTGGTCCTATCGTT+GGG + Chr1:77201711-77201730 None:intergenic 55.0%
TTCAGCCCTTGTCCAACAGG+AGG + Chr1:77202701-77202720 None:intergenic 55.0%
! CTTGATCAAGGGTGCAGGCA+AGG + Chr1:77209021-77209040 None:intergenic 55.0%
! GCATCAGCCTTTGGTGTGGT+TGG + Chr1:77200970-77200989 None:intergenic 55.0%
! GCGGAGTATTCCAACCAGGT+TGG + Chr1:77205917-77205936 None:intergenic 55.0%
! GCTGGTGCAAGTAGCTTTGC+TGG - Chr1:77200152-77200171 MsG0180004377.01.T01:CDS 55.0%
! GGTTGCGGAGTATTCCAACC+AGG + Chr1:77205921-77205940 None:intergenic 55.0%
! GTTGGTTCAAGGGAGAGTGG+AGG + Chr1:77204116-77204135 None:intergenic 55.0%
! TAGCCCTTGATCAAGGGTGC+AGG + Chr1:77209026-77209045 None:intergenic 55.0%
! TCAAGGGCTAGTGACCAAGG+CGG - Chr1:77209036-77209055 MsG0180004377.01.T01:CDS 55.0%
!! AAGGGCATCAGCCTTTGGTG+TGG + Chr1:77200974-77200993 None:intergenic 55.0%
!! GGCGGAAAGGATTTTAGCCG+TGG - Chr1:77203994-77204013 MsG0180004377.01.T01:intron 55.0%
!! GTTCTCACCGGCTTGGTTTC+GGG - Chr1:77206678-77206697 MsG0180004377.01.T01:CDS 55.0%
ACACTCAGTGGGCACAGAGC+TGG - Chr1:77202395-77202414 MsG0180004377.01.T01:intron 60.0%
ACCAAGCCGGTGAGAACTCC+AGG + Chr1:77206675-77206694 None:intergenic 60.0%
AGCTTGGCGTAGGGACCAAG+AGG - Chr1:77206264-77206283 MsG0180004377.01.T01:intron 60.0%
CAACGATAGGACCACCTCGG+AGG - Chr1:77201710-77201729 MsG0180004377.01.T01:CDS 60.0%
CTCCGAGGTGGTCCTATCGT+TGG + Chr1:77201712-77201731 None:intergenic 60.0%
CTTCCAGGCCACTGCTCCAT+GGG + Chr1:77201036-77201055 None:intergenic 60.0%
CTTGGTCCCTACGCCAAGCT+TGG + Chr1:77206264-77206283 None:intergenic 60.0%
! AAGGGTGCAGGCAAGGGCAA+TGG + Chr1:77209014-77209033 None:intergenic 60.0%
! ACCTGGAGTTCTCACCGGCT+TGG - Chr1:77206671-77206690 MsG0180004377.01.T01:CDS 60.0%
!! CACCGGCTTGGTTTCGGGTT+TGG - Chr1:77206683-77206702 MsG0180004377.01.T01:CDS 60.0%
CAGTGGGCACAGAGCTGGTG+AGG - Chr1:77202400-77202419 MsG0180004377.01.T01:intron 65.0%
CCATGGAGCAGTGGCCTGGA+AGG - Chr1:77201034-77201053 MsG0180004377.01.T01:intron 65.0%
CCTTCCAGGCCACTGCTCCA+TGG + Chr1:77201037-77201056 None:intergenic 65.0%
GATGGTGCAGTGGGTGCGCA+AGG - Chr1:77207496-77207515 MsG0180004377.01.T01:intron 65.0%
TGTCCCATGGAGCAGTGGCC+TGG - Chr1:77201030-77201049 MsG0180004377.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 77199966 77209108 77199966 ID=MsG0180004377.01;Name=MsG0180004377.01
Chr1 mRNA 77199966 77209108 77199966 ID=MsG0180004377.01.T01;Parent=MsG0180004377.01;Name=MsG0180004377.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0.78|0.86|1|0.57|0.53|15|0|571
Chr1 exon 77199966 77200442 77199966 ID=MsG0180004377.01.T01:exon:12766;Parent=MsG0180004377.01.T01
Chr1 exon 77201372 77201455 77201372 ID=MsG0180004377.01.T01:exon:12765;Parent=MsG0180004377.01.T01
Chr1 exon 77201557 77201733 77201557 ID=MsG0180004377.01.T01:exon:12764;Parent=MsG0180004377.01.T01
Chr1 exon 77206341 77206795 77206341 ID=MsG0180004377.01.T01:exon:12763;Parent=MsG0180004377.01.T01
Chr1 exon 77207333 77207395 77207333 ID=MsG0180004377.01.T01:exon:12762;Parent=MsG0180004377.01.T01
Chr1 exon 77207963 77208137 77207963 ID=MsG0180004377.01.T01:exon:12761;Parent=MsG0180004377.01.T01
Chr1 exon 77208512 77208647 77208512 ID=MsG0180004377.01.T01:exon:12760;Parent=MsG0180004377.01.T01
Chr1 exon 77208855 77208921 77208855 ID=MsG0180004377.01.T01:exon:12759;Parent=MsG0180004377.01.T01
Chr1 exon 77209027 77209108 77209027 ID=MsG0180004377.01.T01:exon:12758;Parent=MsG0180004377.01.T01
Chr1 CDS 77209027 77209108 77209027 ID=MsG0180004377.01.T01:cds;Parent=MsG0180004377.01.T01
Chr1 CDS 77208855 77208921 77208855 ID=MsG0180004377.01.T01:cds;Parent=MsG0180004377.01.T01
Chr1 CDS 77208512 77208647 77208512 ID=MsG0180004377.01.T01:cds;Parent=MsG0180004377.01.T01
Chr1 CDS 77207963 77208137 77207963 ID=MsG0180004377.01.T01:cds;Parent=MsG0180004377.01.T01
Chr1 CDS 77207333 77207395 77207333 ID=MsG0180004377.01.T01:cds;Parent=MsG0180004377.01.T01
Chr1 CDS 77206341 77206795 77206341 ID=MsG0180004377.01.T01:cds;Parent=MsG0180004377.01.T01
Chr1 CDS 77201557 77201733 77201557 ID=MsG0180004377.01.T01:cds;Parent=MsG0180004377.01.T01
Chr1 CDS 77201372 77201455 77201372 ID=MsG0180004377.01.T01:cds;Parent=MsG0180004377.01.T01
Chr1 CDS 77199966 77200442 77199966 ID=MsG0180004377.01.T01:cds;Parent=MsG0180004377.01.T01
Gene Sequence

>MsG0180004377.01.T01

ATGTCAACACCTTTCCAATCTACACCTTCTTTCCAATCGGCTGGTACCTTTTCCTTTAGCAACTTTGGCCAGACACAACCTGCTGGTGCAAGTAGCTTTGCTGGAGCTCAAACTCAAAGCATGTTTGGTCAGAATAATGTTGGACTTCAGGCTATTCCCCAGAGTTCTATGGTTGCACAGCAGCACCCATTACAAACCCATTTGAACACTTCCTGCTTTGCCTCAGATGTCAATTGGTCGAGTTGGAACCACTCCTTCCGTTCATATGGTATCTCTAGCATGCCTGTTCCATTCTTTAGTGATGATGAAGATACTCCAACCACACCAAAGGCTGATGCCCTTTTCATTCCTAGGGAAAATCCAAGGGCGTTGATCATTTGTCCCATGGAGCAGTGGCCTGGAAGGACTTCTGAGAAAGCATCCTCTTTTAAGGATAGATACACCTCCGTGAATGAGAATGGGATAAGCTCAAGAGAAGCAGGTACCAAACCCAACGATAGGACCACCTCGGAGGAAAAAGAGAGGACTGCAGCTGAAAATGGTGTTGTCAAGGAGCAAGTTCAGCAGCCTGTACGTACGAAGCATGCATCCAATGGGAATAACGAAGACCATTCTCTGCAAAAGGCGGATATGTACAAGACACTCAGTGGGCACAGAGCTGGTGAGGCTGCCATTGTGTATGAACATGGAGCTGATGTTGAGGCACTAATGCCAAAGCTGCGACGGTCTGATTACTACACACTGCCTCGTATTCATGAATTGGCGGCTAAGGAAAGAGCTGAACCAGGATTCTGCAGTCATGTCAAGGACTTTGTCGTTGGAAGGCAAGGTTATGGCAGCATCAGATTTTTGGGTGTGACAGATGTACGAGGGATTGATCTCGAGTCCATTGTTCAGTTTAACAATCGTGAGGTGATTGTATACATGGATGATTCAAAGAAACCTCCTGTTGGACAAGGGCTGAATAAGCCTGCTGAGAATGGACCACCACAGTATCGCAGTAGAACGGTGTTTGAAGATGCGAGTCCTGAGTTGGTTAGGGATTTCTTTTGGGATGATGAGTTTCGGTCGAGGTGGGATGATATGCTTCTACATGCTTCAACTATTCAAGAGTGTGAGGTCACTGGAACAATGATGGTGCAGTGGGTGCGCAAGTTTCCCTTCTTTTGCAGTGATAGAGAATATATCATAGGTCGTCGAATTTGGGATGCAGAGCGAACTTACTACTGTGTGACTAAGAGACTTACACGCATCTGTTGCATATGTGGACCAGTTAAATCAAGAAAAGATGGCCAGCTGACTTCATGTGAAGTGTTGTTCTTTCACTATGAAGATATGGGCATACCTTGGGAAATCGCTAAGCTTGGAGTTCGTCAGGGTATGTGGGGAGCCGTCAAGAAGTTTGATCCTGGACTACGTACGTATAAGAAAGAAAGGGATTCCGGCGTTCCATTGTCAGCATGTGCTAATAACGCTAAAATCAATACTAAAGTAAGTGCTGATTACGTGAGATCTGTGGAAGACTCGACCGGTAACCTGTTGGAGACTGAAAATCAGGATTCTTCTGATGACAAACCGATCGGGAGAAGCATACCTAAGCTTCTAGTTGTTGGCGGAGCCATTGCCCTTGCCTGCACCCTTGATCAAGGGCTAGTGACCAAGGCGGTTGTATTTGGAATAGCCCGACGGTTTGGAAAATTCGGAAGGAGGTTGTGA
Protein sequence

>MsG0180004377.01.T01

MSTPFQSTPSFQSAGTFSFSNFGQTQPAGASSFAGAQTQSMFGQNNVGLQAIPQSSMVAQQHPLQTHLNTSCFASDVNWSSWNHSFRSYGISSMPVPFFSDDEDTPTTPKADALFIPRENPRALIICPMEQWPGRTSEKASSFKDRYTSVNENGISSREAGTKPNDRTTSEEKERTAAENGVVKEQVQQPVRTKHASNGNNEDHSLQKADMYKTLSGHRAGEAAIVYEHGADVEALMPKLRRSDYYTLPRIHELAAKERAEPGFCSHVKDFVVGRQGYGSIRFLGVTDVRGIDLESIVQFNNREVIVYMDDSKKPPVGQGLNKPAENGPPQYRSRTVFEDASPELVRDFFWDDEFRSRWDDMLLHASTIQECEVTGTMMVQWVRKFPFFCSDREYIIGRRIWDAERTYYCVTKRLTRICCICGPVKSRKDGQLTSCEVLFFHYEDMGIPWEIAKLGVRQGMWGAVKKFDPGLRTYKKERDSGVPLSACANNAKINTKVSADYVRSVEDSTGNLLETENQDSSDDKPIGRSIPKLLVVGGAIALACTLDQGLVTKAVVFGIARRFGKFGRRL*