AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004514.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004514.01.T01 MTR_7g114570 40.517 116 34 2 253 333 737 852 8.53e-16 79.3
MsG0180004514.01.T01 MTR_7g114570 40.517 116 34 2 253 333 726 841 9.30e-16 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 95 sgRNAs with CRISPR-Local

Find 679 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACGTTTCCCCGGCGGTTC+CGG 0.171805 1:-79015559 MsG0180004514.01.T01:CDS
TCTCATCATAAATGGCAATT+TGG 0.202730 1:+79010936 None:intergenic
TAAGGCTTTGTTTGGGAGTT+TGG 0.214238 1:-79016375 MsG0180004514.01.T01:CDS
AATTTCTTTCTCATCATAAA+TGG 0.240661 1:+79010928 None:intergenic
GAAACGTTGCTGATTCATTT+TGG 0.251699 1:+79015573 None:intergenic
TGGAGGGAGGGGATGACTTT+GGG 0.255875 1:-79016355 MsG0180004514.01.T01:intron
TTTGTCCTTAAGGCTTTGTT+TGG 0.256547 1:-79016383 MsG0180004514.01.T01:CDS
GATATTTCTTCTTGCGAATA+GGG 0.262081 1:+79014580 None:intergenic
AACGTTTCCCCGGCGGTTCC+GGG 0.263171 1:-79015558 MsG0180004514.01.T01:CDS
TTGGAGGGAGGGGATGACTT+TGG 0.307855 1:-79016356 MsG0180004514.01.T01:CDS
AATCTCAAAATCTGTCAAAA+AGG 0.314339 1:+79011085 None:intergenic
AGGTATTATGTTGAAAAGTT+TGG 0.322326 1:-79013297 MsG0180004514.01.T01:CDS
TACCAGAATCTGGAGTTTCT+TGG 0.327695 1:+79007894 None:intergenic
ACCAGAATCTGGAGTTTCTT+GGG 0.340136 1:+79007895 None:intergenic
GTTTGGGAGTTTGGAGGGAG+GGG 0.347945 1:-79016366 MsG0180004514.01.T01:CDS
TGGAACTGTTCTTGATGCCT+TGG 0.354057 1:+79008168 None:intergenic
CAAGTATCTGGAGCAATAAC+TGG 0.354247 1:-79008466 MsG0180004514.01.T01:CDS
GCAATAACTGGATCTCAATT+AGG 0.356190 1:-79008454 MsG0180004514.01.T01:CDS
CCCCAAGAAACTCCAGATTC+TGG 0.357264 1:-79007896 MsG0180004514.01.T01:CDS
TCTGATAGGTCACAAGTATC+TGG 0.369819 1:-79008478 MsG0180004514.01.T01:CDS
CTTTCCTCAGCCTTCCTCTT+CGG 0.372846 1:+79015423 None:intergenic
TGATATTTCTTCTTGCGAAT+AGG 0.373308 1:+79014579 None:intergenic
GAGAACAATAACAGTTATTA+TGG 0.373840 1:-79008288 MsG0180004514.01.T01:CDS
TTGTTTGGGAGTTTGGAGGG+AGG 0.380029 1:-79016368 MsG0180004514.01.T01:CDS
ATGGGATAGGGAAAATATTC+TGG 0.383947 1:-79008312 MsG0180004514.01.T01:intron
TATTCGCAAGAAGAAATATC+AGG 0.390134 1:-79014577 MsG0180004514.01.T01:intron
AGGCGTCAAGAAGCTGCATC+TGG 0.391376 1:-79007974 MsG0180004514.01.T01:CDS
CACTATTGATTACCAGAATC+TGG 0.395476 1:+79007884 None:intergenic
GCTTTGTTTGGGAGTTTGGA+GGG 0.396395 1:-79016371 MsG0180004514.01.T01:CDS
AAAGTTTGGTGCATCAAGTC+TGG 0.397453 1:-79013283 MsG0180004514.01.T01:CDS
GGCTTTGTTTGGGAGTTTGG+AGG 0.422209 1:-79016372 MsG0180004514.01.T01:CDS
TTGTCCTTAAGGCTTTGTTT+GGG 0.444177 1:-79016382 MsG0180004514.01.T01:CDS
ACATTTGAGTCTGAAGTCTC+AGG 0.445971 1:+79015359 None:intergenic
TGTTTGGGAGTTTGGAGGGA+GGG 0.450892 1:-79016367 MsG0180004514.01.T01:CDS
GCATCACATACACAAAAGTA+AGG 0.474954 1:+79008502 None:intergenic
CAGGTCAAGTTAGGGGAGCC+TGG 0.475531 1:-79013329 MsG0180004514.01.T01:intron
TATCCAGTCTCATCTAATGC+TGG 0.484845 1:-79008228 MsG0180004514.01.T01:CDS
AGTCTCATCTAATGCTGGGC+AGG 0.491463 1:-79008223 MsG0180004514.01.T01:CDS
GTGTATGTGATGCATCTGAT+AGG 0.495659 1:-79008492 MsG0180004514.01.T01:CDS
ATAATGAAGAGATGAGAGCT+AGG 0.496892 1:-79013625 MsG0180004514.01.T01:CDS
CGAATAGGGATTTCATCAGC+AGG 0.499574 1:+79014594 None:intergenic
CAGATTCTGGTAATCAATAG+TGG 0.500005 1:-79007883 None:intergenic
ACTGATGCATATCTATAGAA+AGG 0.510197 1:-79014096 MsG0180004514.01.T01:CDS
GAAGCTTGAAGACACATTAA+CGG 0.510764 1:-79010890 MsG0180004514.01.T01:intron
AGAGATGCCATAATTAGTAC+AGG 0.514695 1:+79015328 None:intergenic
GGCGTCAAGAAGCTGCATCT+GGG 0.514736 1:-79007973 MsG0180004514.01.T01:CDS
TTCTTTATCTGCTTATGATG+AGG 0.520588 1:+79007944 None:intergenic
GAGATGAGAGCTAGGGCAAG+AGG 0.521283 1:-79013617 MsG0180004514.01.T01:CDS
AACTCCCAAACAAAGCCTTA+AGG 0.522498 1:+79016378 None:intergenic
TTATCTTACTTATGCGGGTG+AGG 0.528053 1:-79014054 MsG0180004514.01.T01:intron
TGGAAAACGATTTGCATGGC+AGG 0.529754 1:-79011055 MsG0180004514.01.T01:CDS
ATGAATCAGCAACGTTTCCC+CGG 0.533818 1:-79015568 MsG0180004514.01.T01:CDS
CTCATCTAATGCTGGGCAGG+TGG 0.534927 1:-79008220 MsG0180004514.01.T01:CDS
ATCCAGTCTCATCTAATGCT+GGG 0.544164 1:-79008227 MsG0180004514.01.T01:CDS
TAATTATGGCATCTCTGTCA+TGG 0.549504 1:-79015321 MsG0180004514.01.T01:CDS
CCAGAATCTGGAGTTTCTTG+GGG 0.557442 1:+79007896 None:intergenic
TGCCCAGCATTAGATGAGAC+TGG 0.557660 1:+79008225 None:intergenic
ATAATACCTTTCCTTGTACC+AGG 0.558758 1:+79013311 None:intergenic
ACTGACCTTATCAGAAAATG+AGG 0.558977 1:+79013572 None:intergenic
AGTTAGGGGAGCCTGGTACA+AGG 0.561380 1:-79013322 MsG0180004514.01.T01:intron
TTAGAACACAAGATAGGCCA+AGG 0.563818 1:-79008185 MsG0180004514.01.T01:CDS
GAGTAATACTTCAGAGCCAC+GGG 0.566595 1:-79013595 MsG0180004514.01.T01:CDS
GCTGCAAAAGATGCAGCTTG+AGG 0.577289 1:-79015536 MsG0180004514.01.T01:CDS
TGTGGTTATCTTACTTATGC+GGG 0.577293 1:-79014059 MsG0180004514.01.T01:CDS
GCCAGAACTAAAGCTGAGGA+CGG 0.579616 1:-79014621 MsG0180004514.01.T01:intron
GGGGAGCCTGGTACAAGGAA+AGG 0.579983 1:-79013317 MsG0180004514.01.T01:CDS
TCATCATAAGCAGATAAAGA+AGG 0.585192 1:-79007942 MsG0180004514.01.T01:CDS
CCAGAACTAAAGCTGAGGAC+GGG 0.587267 1:-79014620 MsG0180004514.01.T01:intron
AGGAAAGAATTCGTCGAGGA+GGG 0.588221 1:-79015407 MsG0180004514.01.T01:CDS
GCGTCAAGAAGCTGCATCTG+GGG 0.591392 1:-79007972 MsG0180004514.01.T01:CDS
AAGCATTACAGAAGCCGAAG+AGG 0.594179 1:-79015437 MsG0180004514.01.T01:CDS
TAATGAAGAGATGAGAGCTA+GGG 0.596480 1:-79013624 MsG0180004514.01.T01:CDS
GGAGTAATACTTCAGAGCCA+CGG 0.598085 1:-79013596 MsG0180004514.01.T01:CDS
GTGTGGTTATCTTACTTATG+CGG 0.599008 1:-79014060 MsG0180004514.01.T01:CDS
TCTGTCTAGTCATTGCGCCA+TGG 0.600714 1:+79008253 None:intergenic
AGAAATTGCTTGCTTCCACA+AGG 0.603572 1:-79010912 MsG0180004514.01.T01:CDS
ATTACAGAAGCCGAAGAGGA+AGG 0.603706 1:-79015433 MsG0180004514.01.T01:CDS
ATAGAAAGGAATCACTGCCA+TGG 0.618175 1:-79014082 MsG0180004514.01.T01:CDS
GAAGCCGAAGAGGAAGGCTG+AGG 0.631258 1:-79015427 MsG0180004514.01.T01:CDS
GAGATGCCATAATTAGTACA+GGG 0.631454 1:+79015329 None:intergenic
AAGGAATCACTGCCATGGTG+TGG 0.644351 1:-79014077 MsG0180004514.01.T01:CDS
TTTGCAGCCCGGAACCGCCG+GGG 0.648125 1:+79015551 None:intergenic
GATGCCATAATTAGTACAGG+GGG 0.652065 1:+79015331 None:intergenic
CATCACATACACAAAAGTAA+GGG 0.656624 1:+79008503 None:intergenic
GAGGAAAGAATTCGTCGAGG+AGG 0.656944 1:-79015408 MsG0180004514.01.T01:CDS
TGTGTCTTCAAGCTTCCTTG+TGG 0.659538 1:+79010897 None:intergenic
GTTTGGTGCATCAAGTCTGG+AGG 0.670375 1:-79013280 MsG0180004514.01.T01:CDS
AATCAGCAACGTTTCCCCGG+CGG 0.678744 1:-79015565 MsG0180004514.01.T01:CDS
TTATCAGAAAATGAGGCCCG+TGG 0.679245 1:+79013579 None:intergenic
GTAAGCCAGAACTAAAGCTG+AGG 0.686200 1:-79014625 MsG0180004514.01.T01:intron
AGATGCCATAATTAGTACAG+GGG 0.691731 1:+79015330 None:intergenic
TATGGAGAACATAATCACCA+TGG 0.694386 1:-79008270 MsG0180004514.01.T01:CDS
AGAATGGAAAACGATTTGCA+TGG 0.695821 1:-79011059 MsG0180004514.01.T01:CDS
GCTGAGGAAAGAATTCGTCG+AGG 0.734547 1:-79015411 MsG0180004514.01.T01:CDS
TAAGTAAGATAACCACACCA+TGG 0.740182 1:+79014065 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATAATTTTATTTATTATT+GGG - Chr1:79011928-79011947 MsG0180004514.01.T01:intron 0.0%
!!! AACAATAAATTATTTTCTTT+AGG + Chr1:79014033-79014052 None:intergenic 10.0%
!! AAAAAAAAAAATCGAAGTAA+GGG + Chr1:79015440-79015459 None:intergenic 15.0%
!! AAAATAAAAAATAAGTGAGT+CGG - Chr1:79012567-79012586 MsG0180004514.01.T01:intron 15.0%
!! ATTACTATGTTATATGATAT+GGG - Chr1:79010041-79010060 MsG0180004514.01.T01:intron 15.0%
!! ATTATTCCATTTAATGTTAA+GGG + Chr1:79015874-79015893 None:intergenic 15.0%
!! ATTTATTGTATTTATGTGTA+TGG + Chr1:79013942-79013961 None:intergenic 15.0%
!! TAAAAAAAAAAATCGAAGTA+AGG + Chr1:79015441-79015460 None:intergenic 15.0%
!! TATTACTATGTTATATGATA+TGG - Chr1:79010040-79010059 MsG0180004514.01.T01:intron 15.0%
!! TATTATTCCATTTAATGTTA+AGG + Chr1:79015875-79015894 None:intergenic 15.0%
!! TTGTCTCTTATATTTATTTA+TGG - Chr1:79009163-79009182 MsG0180004514.01.T01:intron 15.0%
!! TTTAACAAATCAAGTAATTA+AGG - Chr1:79014076-79014095 MsG0180004514.01.T01:CDS 15.0%
!!! AAAAATCAAACTTAACTTTT+TGG + Chr1:79013286-79013305 None:intergenic 15.0%
!!! AATAGATTTTTCAAATGAAT+AGG - Chr1:79014645-79014664 MsG0180004514.01.T01:intron 15.0%
!!! AATATGTTTTTGTATTTTCT+TGG - Chr1:79010743-79010762 MsG0180004514.01.T01:intron 15.0%
!!! ATTTTTTTTATCTTTCAAAC+AGG - Chr1:79009404-79009423 MsG0180004514.01.T01:intron 15.0%
!!! TAATTTTGTTACTGTTTTAT+AGG - Chr1:79010617-79010636 MsG0180004514.01.T01:intron 15.0%
!!! TTGATTTTTAAACTAGTTTT+GGG - Chr1:79013297-79013316 MsG0180004514.01.T01:CDS 15.0%
!!! TTTGATTTTTAAACTAGTTT+TGG - Chr1:79013296-79013315 MsG0180004514.01.T01:CDS 15.0%
!!! TTTTCTTTTCCATATATATA+TGG - Chr1:79009128-79009147 MsG0180004514.01.T01:intron 15.0%
!! AAAAAAAAAATCGAAGTAAG+GGG + Chr1:79015439-79015458 None:intergenic 20.0%
!! AAAAAACCTTAATTACTTGA+TGG + Chr1:79014057-79014076 None:intergenic 20.0%
!! AAAAACCATTCATAAATCTA+TGG - Chr1:79011172-79011191 MsG0180004514.01.T01:intron 20.0%
!! AAAAATAAACCAAGTTGTAA+AGG + Chr1:79013834-79013853 None:intergenic 20.0%
!! AAACGTCTAAAAAAAAAACT+CGG + Chr1:79013776-79013795 None:intergenic 20.0%
!! AAATATGCAATGGAATAAAA+AGG + Chr1:79010089-79010108 None:intergenic 20.0%
!! AATATCAAAGTAAATGAAAC+AGG + Chr1:79008658-79008677 None:intergenic 20.0%
!! AATATCTGTAATTATTTGAG+AGG - Chr1:79014936-79014955 MsG0180004514.01.T01:intron 20.0%
!! AATTTCTTTCTCATCATAAA+TGG + Chr1:79013349-79013368 None:intergenic 20.0%
!! ATAAGATAAAATCCAAATTC+GGG + Chr1:79009344-79009363 None:intergenic 20.0%
!! ATCAAATTCTATTATTGGAT+GGG - Chr1:79011711-79011730 MsG0180004514.01.T01:intron 20.0%
!! ATTTGCCAGTATTATTATAA+CGG - Chr1:79011882-79011901 MsG0180004514.01.T01:intron 20.0%
!! GATAAGATAAAATCCAAATT+CGG + Chr1:79009345-79009364 None:intergenic 20.0%
!! GATTATTGATGTAAATTTCT+AGG - Chr1:79012730-79012749 MsG0180004514.01.T01:intron 20.0%
!! TAAAATAAGCAAATAATCTC+TGG + Chr1:79014416-79014435 None:intergenic 20.0%
!! TATTCATGAAAAATCAAGTT+GGG - Chr1:79015684-79015703 MsG0180004514.01.T01:intron 20.0%
!! TCCTACAAAATAATATATAC+TGG - Chr1:79012658-79012677 MsG0180004514.01.T01:intron 20.0%
!! TGAATATTTGCAATATGAAT+TGG - Chr1:79009826-79009845 MsG0180004514.01.T01:intron 20.0%
!! TGACTTTAATATATTGTTAG+AGG - Chr1:79011133-79011152 MsG0180004514.01.T01:intron 20.0%
!! TTATTCATGAAAAATCAAGT+TGG - Chr1:79015683-79015702 MsG0180004514.01.T01:intron 20.0%
!! TTGGATAAAATATGGATAAA+TGG - Chr1:79007942-79007961 MsG0180004514.01.T01:CDS 20.0%
!! TTGGATGATTATTTATTTGA+AGG - Chr1:79009192-79009211 MsG0180004514.01.T01:intron 20.0%
!! TTTCTCATTTATTCGTAAAA+TGG - Chr1:79011434-79011453 MsG0180004514.01.T01:intron 20.0%
!! TTTCTTATTCTGATATTTAC+AGG - Chr1:79013163-79013182 MsG0180004514.01.T01:intron 20.0%
!!! AAAATTTTAGAACACAAGAT+AGG - Chr1:79016083-79016102 MsG0180004514.01.T01:intron 20.0%
!!! AAATTTAGTTTTTATGCTGT+CGG - Chr1:79010768-79010787 MsG0180004514.01.T01:intron 20.0%
!!! AATTTGGATTTTATCTTATC+TGG - Chr1:79009345-79009364 MsG0180004514.01.T01:intron 20.0%
!!! ATAAAATAATGGAATACATC+CGG - Chr1:79009253-79009272 MsG0180004514.01.T01:intron 20.0%
!!! ATTTGACTTAAACATCAATT+TGG - Chr1:79010368-79010387 MsG0180004514.01.T01:intron 20.0%
!!! TATTTATTTATGGTTTGCAT+TGG - Chr1:79009173-79009192 MsG0180004514.01.T01:intron 20.0%
!!! TCACTAGTATTTTAAATTCT+TGG - Chr1:79015121-79015140 MsG0180004514.01.T01:intron 20.0%
!!! TCCAGTATATATTATTTTGT+AGG + Chr1:79012662-79012681 None:intergenic 20.0%
!!! TGATTTTTAAACTAGTTTTG+GGG - Chr1:79013298-79013317 MsG0180004514.01.T01:CDS 20.0%
!!! TTCTTTTTTTATGATTGACT+TGG - Chr1:79011976-79011995 MsG0180004514.01.T01:intron 20.0%
!!! TTGACTTTTATTAATTTTCC+AGG - Chr1:79012815-79012834 MsG0180004514.01.T01:intron 20.0%
!!! TTTTATTTATTATTGGGCAT+AGG - Chr1:79011934-79011953 MsG0180004514.01.T01:intron 20.0%
! AAAAAAAAATCGAAGTAAGG+GGG + Chr1:79015438-79015457 None:intergenic 25.0%
! AAAAAATCAGTGAAAAACCA+AGG + Chr1:79009391-79009410 None:intergenic 25.0%
! AAACTCAAAAAATGTATTGG+AGG + Chr1:79008109-79008128 None:intergenic 25.0%
! AATACACTTTCTACTATTAC+AGG - Chr1:79010142-79010161 MsG0180004514.01.T01:intron 25.0%
! AATACTCAACATTGTTTGTA+TGG - Chr1:79009306-79009325 MsG0180004514.01.T01:intron 25.0%
! AATCAGAAAAATTATTCTGG+TGG + Chr1:79010816-79010835 None:intergenic 25.0%
! AATCTCAAAATCTGTCAAAA+AGG + Chr1:79013192-79013211 None:intergenic 25.0%
! ACTGAGTATGAGATTAAAAA+TGG + Chr1:79012073-79012092 None:intergenic 25.0%
! AGAAAACCCTTAACATTAAA+TGG - Chr1:79015865-79015884 MsG0180004514.01.T01:intron 25.0%
! AGGAATATTAATGTGAACTT+CGG - Chr1:79014361-79014380 MsG0180004514.01.T01:intron 25.0%
! AGGTATTATGTTGAAAAGTT+TGG - Chr1:79010977-79010996 MsG0180004514.01.T01:intron 25.0%
! ATACACCGTTATAATAATAC+TGG + Chr1:79011890-79011909 None:intergenic 25.0%
! ATACACTTTCTACTATTACA+GGG - Chr1:79010143-79010162 MsG0180004514.01.T01:intron 25.0%
! ATAGAACGAAAAATGAACAA+TGG + Chr1:79012793-79012812 None:intergenic 25.0%
! ATGCATACACATGAATTTAT+AGG - Chr1:79014119-79014138 MsG0180004514.01.T01:intron 25.0%
! CATCAAATTCTATTATTGGA+TGG - Chr1:79011710-79011729 MsG0180004514.01.T01:intron 25.0%
! GAGAACAATAACAGTTATTA+TGG - Chr1:79015986-79016005 MsG0180004514.01.T01:intron 25.0%
! GCTAAAAAATTGTTTAGAAG+AGG - Chr1:79008383-79008402 MsG0180004514.01.T01:intron 25.0%
! GCTTCATCAAATTCTATTAT+TGG - Chr1:79011706-79011725 MsG0180004514.01.T01:intron 25.0%
! TACAAACAATGTTGAGTATT+CGG + Chr1:79009306-79009325 None:intergenic 25.0%
! TATTAGCTCATTGATATCAA+TGG - Chr1:79009522-79009541 MsG0180004514.01.T01:intron 25.0%
! TGAAACCATAGATTTATGAA+TGG + Chr1:79011180-79011199 None:intergenic 25.0%
! TGAAAGATATCCTAGTATAA+TGG - Chr1:79012189-79012208 MsG0180004514.01.T01:intron 25.0%
! TTGTTTCCATCAAGTAATTA+AGG - Chr1:79014048-79014067 MsG0180004514.01.T01:intron 25.0%
! TTTAATGTTCCATGTGAAAA+TGG - Chr1:79015581-79015600 MsG0180004514.01.T01:CDS 25.0%
! TTTACTTTGATATTTGCAGA+TGG - Chr1:79008664-79008683 MsG0180004514.01.T01:intron 25.0%
!! AGGTATTTTGCTTTCTAATT+AGG - Chr1:79010527-79010546 MsG0180004514.01.T01:intron 25.0%
!! ATTCATGAAAAATCAAGTTG+GGG - Chr1:79015685-79015704 MsG0180004514.01.T01:intron 25.0%
!! TTTTGTTACTGTTTTATAGG+TGG - Chr1:79010620-79010639 MsG0180004514.01.T01:intron 25.0%
!!! AAGTAAAAATAGGTTGATGA+AGG + Chr1:79013084-79013103 None:intergenic 25.0%
!!! ACAAACGTGTTTTAAGAAAA+GGG + Chr1:79013650-79013669 None:intergenic 25.0%
!!! AGATTTTGAGATTGATAGAA+TGG - Chr1:79013199-79013218 MsG0180004514.01.T01:intron 25.0%
!!! AGCTTTTTATTTGAAGAATG+GGG + Chr1:79011290-79011309 None:intergenic 25.0%
!!! ATAATGGATAGGATGTATTA+AGG - Chr1:79012205-79012224 MsG0180004514.01.T01:intron 25.0%
!!! ATATATGTCGATTTGTGAAT+TGG - Chr1:79014145-79014164 MsG0180004514.01.T01:intron 25.0%
!!! ATCAATAATCTAAAAGCACT+CGG + Chr1:79012720-79012739 None:intergenic 25.0%
!!! ATTGCTCTGTTTTATTTTTC+TGG - Chr1:79014584-79014603 MsG0180004514.01.T01:CDS 25.0%
!!! CAATTTTTTTTGTTAGATGC+AGG - Chr1:79014735-79014754 MsG0180004514.01.T01:intron 25.0%
!!! CAGCTTTTTATTTGAAGAAT+GGG + Chr1:79011291-79011310 None:intergenic 25.0%
!!! CTAGTATTTTAAATTCTTGG+TGG - Chr1:79015124-79015143 MsG0180004514.01.T01:intron 25.0%
!!! GAGTTTTTTTTTTAGACGTT+TGG - Chr1:79013775-79013794 MsG0180004514.01.T01:intron 25.0%
!!! GTTCTCATTAATTTTGCTAT+TGG - Chr1:79011782-79011801 MsG0180004514.01.T01:intron 25.0%
!!! TCAGCTTTTTATTTGAAGAA+TGG + Chr1:79011292-79011311 None:intergenic 25.0%
!!! TGGTTTTTGTTTCTTTTTAC+AGG - Chr1:79013795-79013814 MsG0180004514.01.T01:intron 25.0%
!!! TTGTTTTGGTCCATAAATTT+CGG + Chr1:79016193-79016212 None:intergenic 25.0%
!!! TTTAGAAGAGGATTTTTTGA+AGG - Chr1:79008395-79008414 MsG0180004514.01.T01:intron 25.0%
!!! TTTTGTTTGTCAAATGTCAT+AGG - Chr1:79010271-79010290 MsG0180004514.01.T01:intron 25.0%
AAAAAAGGAAGGAAGAATAG+AGG - Chr1:79008293-79008312 MsG0180004514.01.T01:CDS 30.0%
AAAAAGGAAGGAAGAATAGA+GGG - Chr1:79008294-79008313 MsG0180004514.01.T01:CDS 30.0%
AAATGAACAATGGTCATGTA+TGG + Chr1:79012783-79012802 None:intergenic 30.0%
AAATGGAATAATACATCCCA+CGG - Chr1:79015882-79015901 MsG0180004514.01.T01:intron 30.0%
AACATAAATCCCCCTAATTT+GGG - Chr1:79008357-79008376 MsG0180004514.01.T01:intron 30.0%
AAGAAATAGATGACATTGAG+AGG + Chr1:79008184-79008203 None:intergenic 30.0%
AAGAAGAAATATCAGGTTTG+AGG - Chr1:79009704-79009723 MsG0180004514.01.T01:intron 30.0%
AAGCGTCATAAACAATAGAT+AGG + Chr1:79009059-79009078 None:intergenic 30.0%
AAGGAGGAATTAAACAAAGA+AGG - Chr1:79012390-79012409 MsG0180004514.01.T01:intron 30.0%
AATTGCACTCATTATGTCTT+TGG - Chr1:79011820-79011839 MsG0180004514.01.T01:intron 30.0%
ACAAACAAAAGAATGAACAC+AGG + Chr1:79010261-79010280 None:intergenic 30.0%
ACAGAGCAATAATTAACACT+TGG + Chr1:79014574-79014593 None:intergenic 30.0%
ACTGATGCATATCTATAGAA+AGG - Chr1:79010178-79010197 MsG0180004514.01.T01:intron 30.0%
AGAAATAGATGACATTGAGA+GGG + Chr1:79008183-79008202 None:intergenic 30.0%
AGCAAAAGGACATAATGATA+CGG + Chr1:79012846-79012865 None:intergenic 30.0%
AGGAGGAATTAAACAAAGAA+GGG - Chr1:79012391-79012410 MsG0180004514.01.T01:intron 30.0%
ATAAAGAGTTAGGAAAAGAG+GGG - Chr1:79012292-79012311 MsG0180004514.01.T01:intron 30.0%
ATATTTCACAAAACCAGTGT+AGG - Chr1:79011672-79011691 MsG0180004514.01.T01:intron 30.0%
ATCTTAAGATCAGAAGCAAA+AGG + Chr1:79012860-79012879 None:intergenic 30.0%
ATGATACAAAACCACTCATT+TGG + Chr1:79008134-79008153 None:intergenic 30.0%
CAAGTACAGTTTAGTGTAAA+TGG + Chr1:79009988-79010007 None:intergenic 30.0%
CACATATTTCAAAACCTACA+AGG + Chr1:79011847-79011866 None:intergenic 30.0%
CATCACATACACAAAAGTAA+GGG + Chr1:79015774-79015793 None:intergenic 30.0%
CTTATCCTTTCATATTCTGA+AGG + Chr1:79014303-79014322 None:intergenic 30.0%
GAACAGCAAATAATTTGACA+AGG + Chr1:79011083-79011102 None:intergenic 30.0%
GAACATTAAACTTAACCATC+AGG + Chr1:79015571-79015590 None:intergenic 30.0%
GAAGTTCACATTAATATTCC+TGG + Chr1:79014362-79014381 None:intergenic 30.0%
GATAAAGAGTTAGGAAAAGA+GGG - Chr1:79012291-79012310 MsG0180004514.01.T01:intron 30.0%
GATATTTCTTCTTGCGAATA+GGG + Chr1:79009697-79009716 None:intergenic 30.0%
GATGTAACTGATAAAGAGTT+AGG - Chr1:79012282-79012301 MsG0180004514.01.T01:intron 30.0%
GGCAATCAGAAAAATTATTC+TGG + Chr1:79010819-79010838 None:intergenic 30.0%
GGGAAACTCAAAAAATGTAT+TGG + Chr1:79008112-79008131 None:intergenic 30.0%
GTATTCACAGTTTCTAACAT+CGG - Chr1:79009794-79009813 MsG0180004514.01.T01:intron 30.0%
GTTAATTTCAGTACCTAATG+CGG - Chr1:79015344-79015363 MsG0180004514.01.T01:CDS 30.0%
TAACATAAATCCCCCTAATT+TGG - Chr1:79008356-79008375 MsG0180004514.01.T01:intron 30.0%
TAACCAGTCATCAAAATTGT+TGG - Chr1:79014277-79014296 MsG0180004514.01.T01:intron 30.0%
TAACTAGGCTAAGATAATGA+CGG - Chr1:79015370-79015389 MsG0180004514.01.T01:CDS 30.0%
TACAACATTGACAATTAGGT+AGG + Chr1:79010117-79010136 None:intergenic 30.0%
TACATCCTATCCATTATACT+AGG + Chr1:79012202-79012221 None:intergenic 30.0%
TAGATCTAAGAACATGATAG+AGG + Chr1:79012970-79012989 None:intergenic 30.0%
TATTCACAGTTTCTAACATC+GGG - Chr1:79009795-79009814 MsG0180004514.01.T01:intron 30.0%
TATTCGCAAGAAGAAATATC+AGG - Chr1:79009697-79009716 MsG0180004514.01.T01:intron 30.0%
TATTCTTCTCCTTTACAACT+TGG - Chr1:79013822-79013841 MsG0180004514.01.T01:intron 30.0%
TATTTCACAAAACCAGTGTA+GGG - Chr1:79011673-79011692 MsG0180004514.01.T01:intron 30.0%
TCAAAAAATGTATTGGAGGA+GGG + Chr1:79008105-79008124 None:intergenic 30.0%
TCAACATTGTTTGTATGGAT+GGG - Chr1:79009311-79009330 MsG0180004514.01.T01:intron 30.0%
TCATCATAAGCAGATAAAGA+AGG - Chr1:79016332-79016351 MsG0180004514.01.T01:intron 30.0%
TCCATATATATATGGCTTTC+AGG - Chr1:79009136-79009155 MsG0180004514.01.T01:intron 30.0%
TCCTGAAAGCCATATATATA+TGG + Chr1:79009140-79009159 None:intergenic 30.0%
TCTCATCATAAATGGCAATT+TGG + Chr1:79013341-79013360 None:intergenic 30.0%
TGAGGGAGAACATAAAATAA+TGG - Chr1:79009242-79009261 MsG0180004514.01.T01:intron 30.0%
TGAGTACAACATTGACAATT+AGG + Chr1:79010121-79010140 None:intergenic 30.0%
TGATAAAGAGTTAGGAAAAG+AGG - Chr1:79012290-79012309 MsG0180004514.01.T01:intron 30.0%
TGATACAAAACCACTCATTT+GGG + Chr1:79008133-79008152 None:intergenic 30.0%
TGATATTTCTTCTTGCGAAT+AGG + Chr1:79009698-79009717 None:intergenic 30.0%
TGGCTCTTTAGATTAAAGTT+TGG + Chr1:79011332-79011351 None:intergenic 30.0%
TTAATATGCTCATGCTTTCA+AGG - Chr1:79008772-79008791 MsG0180004514.01.T01:intron 30.0%
TTCATTATGAAAACTTTGCC+AGG + Chr1:79010906-79010925 None:intergenic 30.0%
TTCTTTATCTGCTTATGATG+AGG + Chr1:79016333-79016352 None:intergenic 30.0%
! AATACTAAAGCACCTGTAAA+TGG - Chr1:79016269-79016288 MsG0180004514.01.T01:intron 30.0%
! AATCTAGAAAATTTTTCCCC+TGG - Chr1:79012886-79012905 MsG0180004514.01.T01:intron 30.0%
! CTAAAATGACAACTTTTTGC+TGG - Chr1:79011645-79011664 MsG0180004514.01.T01:intron 30.0%
! GGCATAGGTTATATTTGTTT+TGG - Chr1:79011949-79011968 MsG0180004514.01.T01:intron 30.0%
! TATTTTCTCAGGTCAAGTTA+GGG - Chr1:79010937-79010956 MsG0180004514.01.T01:CDS 30.0%
! TGATGATTTTATCCTTTCCT+TGG - Chr1:79009371-79009390 MsG0180004514.01.T01:intron 30.0%
! TTCCTCCTTTTTAATAGCTT+TGG + Chr1:79012379-79012398 None:intergenic 30.0%
! TTTTCACGTGTTGTATTGTA+GGG + Chr1:79013684-79013703 None:intergenic 30.0%
! TTTTTCACGTGTTGTATTGT+AGG + Chr1:79013685-79013704 None:intergenic 30.0%
!! AAAATAGGTTGATGAAGGAT+CGG + Chr1:79013079-79013098 None:intergenic 30.0%
!! ACTTTGGGTTGGATAAAATA+TGG - Chr1:79007934-79007953 MsG0180004514.01.T01:CDS 30.0%
!! CATTAACGGTAAGTTTTATG+TGG - Chr1:79013398-79013417 MsG0180004514.01.T01:intron 30.0%
!! GATATCCTAGTATAATGGAT+AGG - Chr1:79012194-79012213 MsG0180004514.01.T01:intron 30.0%
!! GTATTTTAAATTCTTGGTGG+AGG - Chr1:79015127-79015146 MsG0180004514.01.T01:intron 30.0%
!! GTCAAATTATTTGCTGTTCT+TGG - Chr1:79011084-79011103 MsG0180004514.01.T01:CDS 30.0%
!! TTATGATTGACTTGGTAGAA+TGG - Chr1:79011984-79012003 MsG0180004514.01.T01:intron 30.0%
!! TTTTTATTTGAAGAATGGGG+CGG + Chr1:79011287-79011306 None:intergenic 30.0%
!!! AGATTTCTGGAGTTGTTTTA+CGG - Chr1:79012421-79012440 MsG0180004514.01.T01:intron 30.0%
!!! AGTAGTACCTTTTATTTTCC+AGG + Chr1:79009023-79009042 None:intergenic 30.0%
!!! CAAACGTGTTTTAAGAAAAG+GGG + Chr1:79013649-79013668 None:intergenic 30.0%
!!! CACAAACGTGTTTTAAGAAA+AGG + Chr1:79013651-79013670 None:intergenic 30.0%
!!! CAGCAAAAAGTTGTCATTTT+AGG + Chr1:79011647-79011666 None:intergenic 30.0%
!!! CTTGTAGGTTTTGAAATATG+TGG - Chr1:79011845-79011864 MsG0180004514.01.T01:intron 30.0%
!!! TAGGTTTTGAAATATGTGGA+AGG - Chr1:79011849-79011868 MsG0180004514.01.T01:intron 30.0%
AAAAGGAAGGAAGAATAGAG+GGG - Chr1:79008295-79008314 MsG0180004514.01.T01:CDS 35.0%
AAACCATTGATCAGCTTATG+GGG - Chr1:79012919-79012938 MsG0180004514.01.T01:intron 35.0%
AAAGTAATTACCTGTCCATC+AGG + Chr1:79009569-79009588 None:intergenic 35.0%
AACAGGATACAAAAGCTACA+AGG + Chr1:79008641-79008660 None:intergenic 35.0%
AACAGTTAGTTAACAGAGGT+TGG - Chr1:79012351-79012370 MsG0180004514.01.T01:intron 35.0%
AACCTAGCATTTGCGTTAAT+TGG + Chr1:79014889-79014908 None:intergenic 35.0%
AAGACTCTTAGACTCTGTTT+GGG + Chr1:79008553-79008572 None:intergenic 35.0%
AAGATTTGATCTCATGACAG+CGG + Chr1:79010484-79010503 None:intergenic 35.0%
AAGCTGATCAATGGTTTGAA+TGG + Chr1:79012916-79012935 None:intergenic 35.0%
AAGTGAGTCGGATTGATAAA+TGG - Chr1:79012579-79012598 MsG0180004514.01.T01:intron 35.0%
AATACTCGAAACCTAGGTAT+TGG + Chr1:79012464-79012483 None:intergenic 35.0%
AATACTGGCAAATCCAACAA+AGG + Chr1:79011875-79011894 None:intergenic 35.0%
AATTAACGCAAATGCTAGGT+TGG - Chr1:79014888-79014907 MsG0180004514.01.T01:intron 35.0%
ACAGATGACTACGACTTATA+TGG + Chr1:79015609-79015628 None:intergenic 35.0%
ACAGGATACAAAAGCTACAA+GGG + Chr1:79008640-79008659 None:intergenic 35.0%
ACAGTTACAACTTCATCTAC+TGG + Chr1:79015320-79015339 None:intergenic 35.0%
ACAGTTAGTTAACAGAGGTT+GGG - Chr1:79012352-79012371 MsG0180004514.01.T01:intron 35.0%
ACAGTTCCAAAATGTGAAGA+CGG - Chr1:79016120-79016139 MsG0180004514.01.T01:intron 35.0%
ACATAAATCCCCCTAATTTG+GGG - Chr1:79008358-79008377 MsG0180004514.01.T01:intron 35.0%
ACCTAGCATTTGCGTTAATT+GGG + Chr1:79014888-79014907 None:intergenic 35.0%
ACCTGTAAATGGAATGTATC+AGG - Chr1:79016280-79016299 MsG0180004514.01.T01:intron 35.0%
ACGAAGATGTTGTCATTGTA+GGG - Chr1:79011579-79011598 MsG0180004514.01.T01:intron 35.0%
ACTGACCTTATCAGAAAATG+AGG + Chr1:79010705-79010724 None:intergenic 35.0%
ACTTGATTACTCTCGATATC+TGG + Chr1:79015078-79015097 None:intergenic 35.0%
AGAATGGAAAACGATTTGCA+TGG - Chr1:79013215-79013234 MsG0180004514.01.T01:intron 35.0%
AGAGATGCCATAATTAGTAC+AGG + Chr1:79008949-79008968 None:intergenic 35.0%
AGATGCCATAATTAGTACAG+GGG + Chr1:79008947-79008966 None:intergenic 35.0%
AGCAGGGTAGAAGTAAAAAT+AGG + Chr1:79013094-79013113 None:intergenic 35.0%
AGGTTCACTTCTCAATATTG+AGG - Chr1:79009462-79009481 MsG0180004514.01.T01:intron 35.0%
AGGTTTGTAAACTGATAGCA+TGG - Chr1:79010547-79010566 MsG0180004514.01.T01:intron 35.0%
ATAATACCTTTCCTTGTACC+AGG + Chr1:79010966-79010985 None:intergenic 35.0%
ATAATGAAGAGATGAGAGCT+AGG - Chr1:79010649-79010668 MsG0180004514.01.T01:intron 35.0%
ATATCTGGCAATCCATCAAT+GGG + Chr1:79015063-79015082 None:intergenic 35.0%
ATCAGTGAAAAACCAAGGAA+AGG + Chr1:79009386-79009405 None:intergenic 35.0%
ATCCAGTTTAACTGAGTAGT+TGG + Chr1:79012139-79012158 None:intergenic 35.0%
ATCGCTGTTATTATTAGCAG+TGG - Chr1:79014978-79014997 MsG0180004514.01.T01:intron 35.0%
ATCTTTCATAACTCGTCCAA+AGG + Chr1:79012265-79012284 None:intergenic 35.0%
ATGACCAATAAACCTTAAGC+AGG + Chr1:79015284-79015303 None:intergenic 35.0%
ATGCTAGCACTTCTCTATTA+TGG + Chr1:79015634-79015653 None:intergenic 35.0%
ATGGATAGGATGTATTAAGG+CGG - Chr1:79012208-79012227 MsG0180004514.01.T01:intron 35.0%
ATGGGATAGGGAAAATATTC+TGG - Chr1:79015962-79015981 MsG0180004514.01.T01:intron 35.0%
ATTACCCCCTGTACTAATTA+TGG - Chr1:79008939-79008958 MsG0180004514.01.T01:intron 35.0%
ATTATAACGGTGTATGCTCA+TGG - Chr1:79011895-79011914 MsG0180004514.01.T01:intron 35.0%
ATTATGTCTTTGGTCCTTGT+AGG - Chr1:79011830-79011849 MsG0180004514.01.T01:intron 35.0%
ATTCACAGTTTCTAACATCG+GGG - Chr1:79009796-79009815 MsG0180004514.01.T01:intron 35.0%
CAAAATTAATGAGAACGAGC+AGG + Chr1:79011778-79011797 None:intergenic 35.0%
CAAACCATTGATCAGCTTAT+GGG - Chr1:79012918-79012937 MsG0180004514.01.T01:intron 35.0%
CAAAGTCAATCTCAAAAGGA+GGG + Chr1:79009862-79009881 None:intergenic 35.0%
CAAGAAAAGTAAGTGTGACA+AGG + Chr1:79008617-79008636 None:intergenic 35.0%
CATAAGCAATCTAGAAATCC+TGG - Chr1:79010885-79010904 MsG0180004514.01.T01:intron 35.0%
CATATCTCAATCCTTGTAGA+TGG - Chr1:79015187-79015206 MsG0180004514.01.T01:intron 35.0%
CATCTTGACAATTCACACAT+TGG + Chr1:79009498-79009517 None:intergenic 35.0%
CGTTCAAAGTCAATCTCAAA+AGG + Chr1:79009866-79009885 None:intergenic 35.0%
CTCAAAAAATGTATTGGAGG+AGG + Chr1:79008106-79008125 None:intergenic 35.0%
CTCAACATTGTTTGTATGGA+TGG - Chr1:79009310-79009329 MsG0180004514.01.T01:intron 35.0%
CTGTATAATACAACTGATCC+AGG + Chr1:79015414-79015433 None:intergenic 35.0%
CTGTTATTATTAGCAGTGGT+GGG - Chr1:79014982-79015001 MsG0180004514.01.T01:intron 35.0%
GAAATAGATGACATTGAGAG+GGG + Chr1:79008182-79008201 None:intergenic 35.0%
GAAATATCAGGTTTGAGGAT+TGG - Chr1:79009709-79009728 MsG0180004514.01.T01:intron 35.0%
GAACACCAGTAGAATTACTT+TGG + Chr1:79010840-79010859 None:intergenic 35.0%
GAAGCTTGAAGACACATTAA+CGG - Chr1:79013384-79013403 MsG0180004514.01.T01:intron 35.0%
GACCAAAGCTATTAAAAAGG+AGG - Chr1:79012374-79012393 MsG0180004514.01.T01:intron 35.0%
GAGATGCCATAATTAGTACA+GGG + Chr1:79008948-79008967 None:intergenic 35.0%
GATACAAAACCACTCATTTG+GGG + Chr1:79008132-79008151 None:intergenic 35.0%
GATTGCCAAAGTAATTCTAC+TGG - Chr1:79010832-79010851 MsG0180004514.01.T01:intron 35.0%
GCAAAAGGACATAATGATAC+GGG + Chr1:79012845-79012864 None:intergenic 35.0%
GCAATAACTGGATCTCAATT+AGG - Chr1:79015820-79015839 MsG0180004514.01.T01:intron 35.0%
GCATCACATACACAAAAGTA+AGG + Chr1:79015775-79015794 None:intergenic 35.0%
GGTTCACTTCTCAATATTGA+GGG - Chr1:79009463-79009482 MsG0180004514.01.T01:intron 35.0%
GTAGGAAGACAAATATGCAA+TGG + Chr1:79010099-79010118 None:intergenic 35.0%
GTGATAAGTAATGCTTCCTT+TGG - Chr1:79012246-79012265 MsG0180004514.01.T01:intron 35.0%
GTGCTTTAGTATTCCCTTTA+GGG + Chr1:79016262-79016281 None:intergenic 35.0%
GTGTGGTTATCTTACTTATG+CGG - Chr1:79010214-79010233 MsG0180004514.01.T01:intron 35.0%
GTTCACATTAATATTCCTGG+TGG + Chr1:79014359-79014378 None:intergenic 35.0%
TAAGACTCTTAGACTCTGTT+TGG + Chr1:79008554-79008573 None:intergenic 35.0%
TAAGTAAGATAACCACACCA+TGG + Chr1:79010212-79010231 None:intergenic 35.0%
TAATGAAGAGATGAGAGCTA+GGG - Chr1:79010650-79010669 MsG0180004514.01.T01:intron 35.0%
TAATTATGGCATCTCTGTCA+TGG - Chr1:79008953-79008972 MsG0180004514.01.T01:intron 35.0%
TACATTGCATGCTTGTATGT+TGG - Chr1:79011108-79011127 MsG0180004514.01.T01:intron 35.0%
TACGAAGATGTTGTCATTGT+AGG - Chr1:79011578-79011597 MsG0180004514.01.T01:intron 35.0%
TAGAACTATGTGATACCTGA+TGG - Chr1:79015553-79015572 MsG0180004514.01.T01:CDS 35.0%
TATAATACAACTGATCCAGG+AGG + Chr1:79015411-79015430 None:intergenic 35.0%
TATCAAACCTTTCTGTGCTT+TGG - Chr1:79015485-79015504 MsG0180004514.01.T01:intron 35.0%
TATGGAGAACATAATCACCA+TGG - Chr1:79016004-79016023 MsG0180004514.01.T01:intron 35.0%
TCAAAAAAATGAGTTGCCTG+AGG - Chr1:79014450-79014469 MsG0180004514.01.T01:intron 35.0%
TCAAACCATTGATCAGCTTA+TGG - Chr1:79012917-79012936 MsG0180004514.01.T01:intron 35.0%
TCAAAGTCAATCTCAAAAGG+AGG + Chr1:79009863-79009882 None:intergenic 35.0%
TCAATGATCAAATCACCTGA+TGG - Chr1:79009551-79009570 MsG0180004514.01.T01:intron 35.0%
TCAGTGCTTATACTGTACTT+TGG - Chr1:79010345-79010364 MsG0180004514.01.T01:intron 35.0%
TCCAGTTTAACTGAGTAGTT+GGG + Chr1:79012138-79012157 None:intergenic 35.0%
TGAATATCTTAATGTCGTCC+AGG - Chr1:79010424-79010443 MsG0180004514.01.T01:intron 35.0%
TGACAAGGAACATGTAAAGA+CGG + Chr1:79008602-79008621 None:intergenic 35.0%
TGGCAATTCAACTAAAACGA+AGG + Chr1:79012763-79012782 None:intergenic 35.0%
TGGGACCAAAGCTATTAAAA+AGG - Chr1:79012371-79012390 MsG0180004514.01.T01:intron 35.0%
TGTCAACAGTTAGTTAACAG+AGG - Chr1:79012347-79012366 MsG0180004514.01.T01:intron 35.0%
TGTGGTTATCTTACTTATGC+GGG - Chr1:79010215-79010234 MsG0180004514.01.T01:intron 35.0%
TTCTCTCTATCTAAGAAACC+TGG + Chr1:79010445-79010464 None:intergenic 35.0%
! ACCATAAAAGCTCAGCTTTT+AGG + Chr1:79011407-79011426 None:intergenic 35.0%
! ACCTAAAAGCTGAGCTTTTA+TGG - Chr1:79011403-79011422 MsG0180004514.01.T01:intron 35.0%
! ATTTTCTCAGGTCAAGTTAG+GGG - Chr1:79010938-79010957 MsG0180004514.01.T01:CDS 35.0%
! CAGCATATGCAAACCTTTTT+GGG + Chr1:79015247-79015266 None:intergenic 35.0%
! CTATTTTCTCAGGTCAAGTT+AGG - Chr1:79010936-79010955 MsG0180004514.01.T01:CDS 35.0%
! GAATATTTTCCCTATCCCAT+TGG + Chr1:79015962-79015981 None:intergenic 35.0%
! GACAAGATAGTGTTTTGTGT+TGG - Chr1:79009594-79009613 MsG0180004514.01.T01:intron 35.0%
! GACAGTGAGATTTTATGCTA+TGG + Chr1:79008580-79008599 None:intergenic 35.0%
! GTATTTCTGTGCTTCTTTGT+CGG - Chr1:79009902-79009921 MsG0180004514.01.T01:intron 35.0%
! TATATGGCACCATTTTCACA+TGG + Chr1:79015593-79015612 None:intergenic 35.0%
! TCAGCATATGCAAACCTTTT+TGG + Chr1:79015248-79015267 None:intergenic 35.0%
!! AACGGTAAGTTTTATGTGGT+GGG - Chr1:79013402-79013421 MsG0180004514.01.T01:intron 35.0%
!! ATTGGAACCTGTTTGTTGTA+TGG + Chr1:79015931-79015950 None:intergenic 35.0%
!! CTGCATGTTTCTATTTTCTC+AGG - Chr1:79010926-79010945 MsG0180004514.01.T01:CDS 35.0%
!! GACTGTTGTGTTACTTTCAT+AGG - Chr1:79010569-79010588 MsG0180004514.01.T01:intron 35.0%
!! TAACGGTAAGTTTTATGTGG+TGG - Chr1:79013401-79013420 MsG0180004514.01.T01:intron 35.0%
!! TAAGTTTTATGTGGTGGGAA+GGG - Chr1:79013407-79013426 MsG0180004514.01.T01:intron 35.0%
!! TATTTTTACTTCTACCCTGC+TGG - Chr1:79013093-79013112 MsG0180004514.01.T01:intron 35.0%
!! TTGTCCTTAAGGCTTTGTTT+GGG - Chr1:79007892-79007911 MsG0180004514.01.T01:CDS 35.0%
!! TTTATTTTTCTGGCAATCGC+TGG - Chr1:79014594-79014613 MsG0180004514.01.T01:CDS 35.0%
!! TTTGTCCTTAAGGCTTTGTT+TGG - Chr1:79007891-79007910 MsG0180004514.01.T01:CDS 35.0%
!!! GAAACGTTGCTGATTCATTT+TGG + Chr1:79008704-79008723 None:intergenic 35.0%
!!! GGGTTCTAAATTGGTTGTTT+TGG + Chr1:79016207-79016226 None:intergenic 35.0%
!!! TACCTTTTATTTTCCAGGCA+GGG + Chr1:79009018-79009037 None:intergenic 35.0%
!!! TAGTTTTGGGGATTCTTTTC+AGG - Chr1:79013310-79013329 MsG0180004514.01.T01:CDS 35.0%
!!! TTCTCGTACTTTTTTGCTGA+AGG - Chr1:79008795-79008814 MsG0180004514.01.T01:intron 35.0%
!!! TTTTTAGCTCCCCCAAATTA+GGG + Chr1:79008371-79008390 None:intergenic 35.0%
!!! TTTTTTAGCTCCCCCAAATT+AGG + Chr1:79008372-79008391 None:intergenic 35.0%
AAATGCACTGCCTGACAAAT+AGG - Chr1:79013042-79013061 MsG0180004514.01.T01:intron 40.0%
AACCATTGATCAGCTTATGG+GGG - Chr1:79012920-79012939 MsG0180004514.01.T01:intron 40.0%
AACCCTGCCTGGAAAATAAA+AGG - Chr1:79009013-79009032 MsG0180004514.01.T01:intron 40.0%
AACTCCCAAACAAAGCCTTA+AGG + Chr1:79007899-79007918 None:intergenic 40.0%
AATATGTGGAAGGCCTTTGT+TGG - Chr1:79011859-79011878 MsG0180004514.01.T01:intron 40.0%
AATGCACTGCCTGACAAATA+GGG - Chr1:79013043-79013062 MsG0180004514.01.T01:intron 40.0%
AATTGTCCGCCAAAACTTGT+TGG + Chr1:79012050-79012069 None:intergenic 40.0%
ACAAGTTTATCTCACCAGCA+GGG + Chr1:79013110-79013129 None:intergenic 40.0%
ACCCAATTAACGCAAATGCT+AGG - Chr1:79014884-79014903 MsG0180004514.01.T01:intron 40.0%
ACCTCTCTGATCTCTAATGT+TGG + Chr1:79009949-79009968 None:intergenic 40.0%
ACGGGTTTCTGCTTTAACAA+TGG - Chr1:79016139-79016158 MsG0180004514.01.T01:intron 40.0%
AGAAATTGCTTGCTTCCACA+AGG - Chr1:79013362-79013381 MsG0180004514.01.T01:intron 40.0%
ATAGAAAGGAATCACTGCCA+TGG - Chr1:79010192-79010211 MsG0180004514.01.T01:intron 40.0%
ATATTGAGAAGTGAACCTCG+TGG + Chr1:79009460-79009479 None:intergenic 40.0%
ATCCAGTCTCATCTAATGCT+GGG - Chr1:79016047-79016066 MsG0180004514.01.T01:intron 40.0%
ATCTGTAAAATCGTACGCGT+CGG - Chr1:79013572-79013591 MsG0180004514.01.T01:intron 40.0%
CAAAATCCCTCTCTCAGAAA+AGG - Chr1:79008469-79008488 MsG0180004514.01.T01:CDS 40.0%
CAAGTTACTCGTGCATGTTT+GGG + Chr1:79010862-79010881 None:intergenic 40.0%
CACAAAACACTATCTTGTCC+AGG + Chr1:79009593-79009612 None:intergenic 40.0%
CACACACGTTAGAAAGATGA+TGG + Chr1:79012624-79012643 None:intergenic 40.0%
CAGCTGCAACTATTGAAGTT+TGG - Chr1:79014500-79014519 MsG0180004514.01.T01:intron 40.0%
CAGGAATGTTACGTTGTAAC+CGG + Chr1:79009275-79009294 None:intergenic 40.0%
CAGTTCCAAAATGTGAAGAC+GGG - Chr1:79016121-79016140 MsG0180004514.01.T01:intron 40.0%
CATAAATCCCCCTAATTTGG+GGG - Chr1:79008359-79008378 MsG0180004514.01.T01:intron 40.0%
CATGACAATCAGCTGCAAAA+TGG + Chr1:79009629-79009648 None:intergenic 40.0%
CCATCAAATCCCTATTTGTC+AGG + Chr1:79013055-79013074 None:intergenic 40.0%
CCTGACAAATAGGGATTTGA+TGG - Chr1:79013052-79013071 MsG0180004514.01.T01:intron 40.0%
CTTAAGCAGGATGCTAAGTA+AGG + Chr1:79015271-79015290 None:intergenic 40.0%
CTTACTTAGCATCCTGCTTA+AGG - Chr1:79015269-79015288 MsG0180004514.01.T01:intron 40.0%
GAGAGGTTACAAGATCGAAT+CGG + Chr1:79014200-79014219 None:intergenic 40.0%
GATATCTGGCAATCCATCAA+TGG + Chr1:79015064-79015083 None:intergenic 40.0%
GATGCCATAATTAGTACAGG+GGG + Chr1:79008946-79008965 None:intergenic 40.0%
GCATCCTGCTTAAGGTTTAT+TGG - Chr1:79015277-79015296 MsG0180004514.01.T01:intron 40.0%
GCCTGATACATTCCATTTAC+AGG + Chr1:79016284-79016303 None:intergenic 40.0%
GCTGTTATTATTAGCAGTGG+TGG - Chr1:79014981-79015000 MsG0180004514.01.T01:intron 40.0%
GGACAGGTAATTACTTTACC+TGG - Chr1:79009572-79009591 MsG0180004514.01.T01:intron 40.0%
GGTGCTTTAGTATTCCCTTT+AGG + Chr1:79016263-79016282 None:intergenic 40.0%
GGTTTCTGCTTTAACAATGG+AGG - Chr1:79016142-79016161 MsG0180004514.01.T01:intron 40.0%
GTAGTCAAAATCGAGATCCT+AGG + Chr1:79014233-79014252 None:intergenic 40.0%
GTGGCTAATCGACAAAAACT+TGG + Chr1:79014848-79014867 None:intergenic 40.0%
GTGTATGTGATGCATCTGAT+AGG - Chr1:79015782-79015801 MsG0180004514.01.T01:intron 40.0%
TACCTAATGCGGCAATAACT+AGG - Chr1:79015355-79015374 MsG0180004514.01.T01:CDS 40.0%
TATCCAGTCTCATCTAATGC+TGG - Chr1:79016046-79016065 MsG0180004514.01.T01:intron 40.0%
TATTGAGAAGTGAACCTCGT+GGG + Chr1:79009459-79009478 None:intergenic 40.0%
TCAATCTCAAAAGGAGGGTT+GGG + Chr1:79009857-79009876 None:intergenic 40.0%
TCACTTCTCAATATTGAGGG+AGG - Chr1:79009466-79009485 MsG0180004514.01.T01:intron 40.0%
TCTGATAGGTCACAAGTATC+TGG - Chr1:79015796-79015815 MsG0180004514.01.T01:intron 40.0%
TGACAGAATACTCGAAACCT+AGG + Chr1:79012470-79012489 None:intergenic 40.0%
TGAGTATTCGGATTGAAACC+AGG + Chr1:79009294-79009313 None:intergenic 40.0%
TGGTGTAGTGATACCCAAAA+AGG - Chr1:79015231-79015250 MsG0180004514.01.T01:intron 40.0%
TTAGAACACAAGATAGGCCA+AGG - Chr1:79016089-79016108 MsG0180004514.01.T01:intron 40.0%
TTATCTTACTTATGCGGGTG+AGG - Chr1:79010220-79010239 MsG0180004514.01.T01:intron 40.0%
TTGGCATGAAGACAATGTGT+CGG - Chr1:79015504-79015523 MsG0180004514.01.T01:intron 40.0%
TTGGGATGATTCCTTTCTTG+TGG - Chr1:79009091-79009110 MsG0180004514.01.T01:intron 40.0%
! AAGGAAGAATAGAGGGGTTT+TGG - Chr1:79008301-79008320 MsG0180004514.01.T01:CDS 40.0%
! AATGTATTGGAGGAGGGTTT+TGG + Chr1:79008099-79008118 None:intergenic 40.0%
! ACATAGCAGCCAACAAGTTT+TGG - Chr1:79012038-79012057 MsG0180004514.01.T01:intron 40.0%
! ACATTTGAGTCTGAAGTCTC+AGG + Chr1:79008918-79008937 None:intergenic 40.0%
! ACCAGAATCTGGAGTTTCTT+GGG + Chr1:79016382-79016401 None:intergenic 40.0%
! ACTTTCTGATTCGAATGTCC+TGG - Chr1:79009219-79009238 MsG0180004514.01.T01:intron 40.0%
! AGAAACCCGTCTTCACATTT+TGG + Chr1:79016129-79016148 None:intergenic 40.0%
! AGGGTTAGATCAGTTGATAC+TGG - Chr1:79011598-79011617 MsG0180004514.01.T01:intron 40.0%
! AGTGTCACTGTCAAAGATAC+AGG + Chr1:79011493-79011512 None:intergenic 40.0%
! ATTTTATGTTCTCCCTCACC+AGG + Chr1:79009240-79009259 None:intergenic 40.0%
! CAAGTATCTGGAGCAATAAC+TGG - Chr1:79015808-79015827 MsG0180004514.01.T01:intron 40.0%
! CATTTTGCAGCTGATTGTCA+TGG - Chr1:79009627-79009646 MsG0180004514.01.T01:intron 40.0%
! GATTAGCCACTCATGAAAGA+TGG - Chr1:79014858-79014877 MsG0180004514.01.T01:intron 40.0%
! GATTGACTTTGAACGAGTAG+TGG - Chr1:79009871-79009890 MsG0180004514.01.T01:intron 40.0%
! GGGTTAGATCAGTTGATACT+GGG - Chr1:79011599-79011618 MsG0180004514.01.T01:intron 40.0%
! GGTTAGATCAGTTGATACTG+GGG - Chr1:79011600-79011619 MsG0180004514.01.T01:intron 40.0%
! TACCAGAATCTGGAGTTTCT+TGG + Chr1:79016383-79016402 None:intergenic 40.0%
! TTTGAGTTTCCCCAAATGAG+TGG - Chr1:79008120-79008139 MsG0180004514.01.T01:intron 40.0%
!! AAAGTTTGGTGCATCAAGTC+TGG - Chr1:79010991-79011010 MsG0180004514.01.T01:intron 40.0%
!! AGGCCAACAATTTTGATGAC+TGG + Chr1:79014283-79014302 None:intergenic 40.0%
!! ATGTCGATTTGTGAATTGGC+AGG - Chr1:79014149-79014168 MsG0180004514.01.T01:intron 40.0%
!! CACAAATCGGGGTTCTAAAT+TGG + Chr1:79016216-79016235 None:intergenic 40.0%
!! CATGAAAAATCAAGTTGGGG+AGG - Chr1:79015688-79015707 MsG0180004514.01.T01:intron 40.0%
!! CTTTCACCTTTTCTGAGAGA+GGG + Chr1:79008478-79008497 None:intergenic 40.0%
!! GTAAGTTTTATGTGGTGGGA+AGG - Chr1:79013406-79013425 MsG0180004514.01.T01:intron 40.0%
!! GTTGGCCTTCAGAATATGAA+AGG - Chr1:79014295-79014314 MsG0180004514.01.T01:intron 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG - Chr1:79007899-79007918 MsG0180004514.01.T01:CDS 40.0%
!!! GAGGATTTTTTGAAGGTCTG+TGG - Chr1:79008402-79008421 MsG0180004514.01.T01:intron 40.0%
!!! GATCTCGATTTTGACTACCT+GGG - Chr1:79014235-79014254 MsG0180004514.01.T01:intron 40.0%
!!! GGGGCAAACGTTTTTTAACT+TGG + Chr1:79016362-79016381 None:intergenic 40.0%
!!! GTACCTTTTATTTTCCAGGC+AGG + Chr1:79009019-79009038 None:intergenic 40.0%
!!! TGCTGATTCATTTTGGCTCT+TGG + Chr1:79008697-79008716 None:intergenic 40.0%
!!! TTCTGGAGTTGTTTTACGGA+GGG - Chr1:79012425-79012444 MsG0180004514.01.T01:intron 40.0%
!!! TTTCTGGAGTTGTTTTACGG+AGG - Chr1:79012424-79012443 MsG0180004514.01.T01:intron 40.0%
!!! TTTTAGCTCCCCCAAATTAG+GGG + Chr1:79008370-79008389 None:intergenic 40.0%
AAAATCGCGATCCAACTCGT+AGG - Chr1:79013450-79013469 MsG0180004514.01.T01:intron 45.0%
AACAGACTCCCTTGGAACAA+AGG + Chr1:79011556-79011575 None:intergenic 45.0%
AAGCATTACAGAAGCCGAAG+AGG - Chr1:79008837-79008856 MsG0180004514.01.T01:intron 45.0%
AATCGTACGATCCTACGAGT+TGG + Chr1:79013464-79013483 None:intergenic 45.0%
AATGGTTTGAATGGCTCTCC+AGG + Chr1:79012907-79012926 None:intergenic 45.0%
ACAAACAGGTTCCAATCAGC+TGG - Chr1:79015935-79015954 MsG0180004514.01.T01:intron 45.0%
ACCAGTGTAGGGTTCAGATT+AGG - Chr1:79011684-79011703 MsG0180004514.01.T01:intron 45.0%
ACCATTGATCAGCTTATGGG+GGG - Chr1:79012921-79012940 MsG0180004514.01.T01:intron 45.0%
ACGAGATCACTCCACAAGAA+AGG + Chr1:79009105-79009124 None:intergenic 45.0%
ACGCTTGATCCTTTCACGTT+GGG - Chr1:79009073-79009092 MsG0180004514.01.T01:intron 45.0%
ACGGTGTATGCTCATGGAAA+TGG - Chr1:79011901-79011920 MsG0180004514.01.T01:intron 45.0%
AGCCTAGTTATTGCCGCATT+AGG + Chr1:79015360-79015379 None:intergenic 45.0%
AGGAAAGAATTCGTCGAGGA+GGG - Chr1:79008867-79008886 MsG0180004514.01.T01:intron 45.0%
AGGAATCATCCCAACGTGAA+AGG + Chr1:79009085-79009104 None:intergenic 45.0%
AGGTTACAAGATCGAATCGG+AGG + Chr1:79014197-79014216 None:intergenic 45.0%
ATCGAGATCCTAGGCAAGAT+CGG + Chr1:79014224-79014243 None:intergenic 45.0%
ATGAATCAGCAACGTTTCCC+CGG - Chr1:79008706-79008725 MsG0180004514.01.T01:intron 45.0%
ATGGTTTGAATGGCTCTCCA+GGG + Chr1:79012906-79012925 None:intergenic 45.0%
ATTACAGAAGCCGAAGAGGA+AGG - Chr1:79008841-79008860 MsG0180004514.01.T01:intron 45.0%
ATTGTACCGTCTCCCATTGA+TGG - Chr1:79015048-79015067 MsG0180004514.01.T01:intron 45.0%
CCTCTCTCAGAAAAGGTGAA+AGG - Chr1:79008476-79008495 MsG0180004514.01.T01:CDS 45.0%
CGAATAGGGATTTCATCAGC+AGG + Chr1:79009683-79009702 None:intergenic 45.0%
CGAGCAGGATAATTGTTGTG+AGG + Chr1:79011763-79011782 None:intergenic 45.0%
CGGTTACAACGTAACATTCC+TGG - Chr1:79009273-79009292 MsG0180004514.01.T01:intron 45.0%
CTAAAGAGCCATTGCATGAG+AGG - Chr1:79011341-79011360 MsG0180004514.01.T01:intron 45.0%
CTCTTCTGCCTTTGTTCCAA+GGG - Chr1:79011545-79011564 MsG0180004514.01.T01:intron 45.0%
CTTAGACTCTGTTTGGGAGT+TGG + Chr1:79008547-79008566 None:intergenic 45.0%
CTTCATGCCAAAGCACAGAA+AGG + Chr1:79015495-79015514 None:intergenic 45.0%
CTTGGAACAAAGGCAGAAGA+GGG + Chr1:79011546-79011565 None:intergenic 45.0%
GACAAGTTTATCTCACCAGC+AGG + Chr1:79013111-79013130 None:intergenic 45.0%
GAGTAATACTTCAGAGCCAC+GGG - Chr1:79010679-79010698 MsG0180004514.01.T01:intron 45.0%
GCAAAAAAGGAAGGAGCAAG+TGG + Chr1:79008207-79008226 None:intergenic 45.0%
GCAAGTTACTCGTGCATGTT+TGG + Chr1:79010863-79010882 None:intergenic 45.0%
GCCAACATTAGAGATCAGAG+AGG - Chr1:79009945-79009964 MsG0180004514.01.T01:intron 45.0%
GCCCAACTACTCAGTTAAAC+TGG - Chr1:79012134-79012153 MsG0180004514.01.T01:intron 45.0%
GGAGTAATACTTCAGAGCCA+CGG - Chr1:79010678-79010697 MsG0180004514.01.T01:intron 45.0%
GGTCGGAATCGTAATCTGAT+GGG - Chr1:79013519-79013538 MsG0180004514.01.T01:intron 45.0%
GGTGAACCATCTTTCATGAG+TGG + Chr1:79014867-79014886 None:intergenic 45.0%
GTAAGCCAGAACTAAAGCTG+AGG - Chr1:79009649-79009668 MsG0180004514.01.T01:intron 45.0%
GTCAATCTCAAAAGGAGGGT+TGG + Chr1:79009858-79009877 None:intergenic 45.0%
GTGAAGCCAAATCATGTGCA+CGG + Chr1:79014809-79014828 None:intergenic 45.0%
TAACACAGCCTCTCATGCAA+TGG + Chr1:79011352-79011371 None:intergenic 45.0%
TAATACATCCCACGGAGTGT+TGG - Chr1:79015890-79015909 MsG0180004514.01.T01:intron 45.0%
TACAGATTTCACGATCTCCG+CGG + Chr1:79013559-79013578 None:intergenic 45.0%
TAGAGGAAGAACCTTGAAGC+AGG + Chr1:79012953-79012972 None:intergenic 45.0%
TAGATGACATTGAGAGGGGA+AGG + Chr1:79008178-79008197 None:intergenic 45.0%
TCTAGGTTCCTCCAATACCT+AGG - Chr1:79012450-79012469 MsG0180004514.01.T01:intron 45.0%
TGATTCGAATGTCCTGGTGA+GGG - Chr1:79009225-79009244 MsG0180004514.01.T01:intron 45.0%
TGGAAAACGATTTGCATGGC+AGG - Chr1:79013219-79013238 MsG0180004514.01.T01:intron 45.0%
TGGAACTGTTCTTGATGCCT+TGG + Chr1:79016109-79016128 None:intergenic 45.0%
TGGCATGAAGACAATGTGTC+GGG - Chr1:79015505-79015524 MsG0180004514.01.T01:intron 45.0%
TGGTCGGAATCGTAATCTGA+TGG - Chr1:79013518-79013537 MsG0180004514.01.T01:intron 45.0%
TGTGTCTTCAAGCTTCCTTG+TGG + Chr1:79013380-79013399 None:intergenic 45.0%
TTATCAGAAAATGAGGCCCG+TGG + Chr1:79010698-79010717 None:intergenic 45.0%
TTCCAATCAGCTGGACCAAT+GGG - Chr1:79015944-79015963 MsG0180004514.01.T01:intron 45.0%
TTCGTATGAACAGACTCCCT+TGG + Chr1:79011564-79011583 None:intergenic 45.0%
TTGGAACAAAGGCAGAAGAG+GGG + Chr1:79011545-79011564 None:intergenic 45.0%
TTGGGATGTGTCCATCTACA+AGG + Chr1:79015201-79015220 None:intergenic 45.0%
TTGGGTATCACTACACCATC+CGG + Chr1:79015229-79015248 None:intergenic 45.0%
! AAGGGGTTGGCAAAAAAGGA+AGG + Chr1:79008216-79008235 None:intergenic 45.0%
! AATCGCTGGAAGCTTTTGCT+TGG - Chr1:79014608-79014627 MsG0180004514.01.T01:CDS 45.0%
! ACGGGCCTCATTTTCTGATA+AGG - Chr1:79010697-79010716 MsG0180004514.01.T01:intron 45.0%
! ATGGGAGTTTTGCCCGAATT+TGG - Chr1:79009329-79009348 MsG0180004514.01.T01:intron 45.0%
! CCAGAATCTGGAGTTTCTTG+GGG + Chr1:79016381-79016400 None:intergenic 45.0%
! CTGGATTGCTTTGATGACTG+TGG - Chr1:79012677-79012696 MsG0180004514.01.T01:intron 45.0%
! CTGTGCAGAGTTGTTGTTCA+CGG - Chr1:79013610-79013629 MsG0180004514.01.T01:CDS 45.0%
! GAAACGAGTTCGAGTTCAAC+AGG - Chr1:79010507-79010526 MsG0180004514.01.T01:intron 45.0%
! GATCAAATCACCTGATGGAC+AGG - Chr1:79009556-79009575 MsG0180004514.01.T01:intron 45.0%
! TATTAGCAGTGGTGGGATGA+TGG - Chr1:79014989-79015008 MsG0180004514.01.T01:intron 45.0%
! TATTCCCTTTAGGGACGTAC+TGG + Chr1:79016253-79016272 None:intergenic 45.0%
! TGACAGTGACACTTGTTAGC+TGG - Chr1:79011500-79011519 MsG0180004514.01.T01:intron 45.0%
! TGTGCAGAGTTGTTGTTCAC+GGG - Chr1:79013611-79013630 MsG0180004514.01.T01:CDS 45.0%
! TTTAGCTCCCCCAAATTAGG+GGG + Chr1:79008369-79008388 None:intergenic 45.0%
!! ACTCGAAACCTAGGTATTGG+AGG + Chr1:79012461-79012480 None:intergenic 45.0%
!! CATAATGATACGGGAGTACC+TGG + Chr1:79012836-79012855 None:intergenic 45.0%
!! CCTTTCACCTTTTCTGAGAG+AGG + Chr1:79008479-79008498 None:intergenic 45.0%
!! CGTTAGAAAGATGATGGACC+AGG + Chr1:79012618-79012637 None:intergenic 45.0%
!! GAAGGGTTAGTCGAGATTTC+TGG - Chr1:79012408-79012427 MsG0180004514.01.T01:intron 45.0%
!! GCTAGGTTGGTGAATGTCAA+TGG - Chr1:79014901-79014920 MsG0180004514.01.T01:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - Chr1:79007903-79007922 MsG0180004514.01.T01:CDS 45.0%
!! GGGAGGCTTTGAAAAAAGGA+AGG - Chr1:79008282-79008301 MsG0180004514.01.T01:CDS 45.0%
!! GTGTTTTGTGTTGGCCAAAC+TGG - Chr1:79009603-79009622 MsG0180004514.01.T01:intron 45.0%
!! TAGCAGCCAACAAGTTTTGG+CGG - Chr1:79012041-79012060 MsG0180004514.01.T01:intron 45.0%
!! TCTGGAGTTGTTTTACGGAG+GGG - Chr1:79012426-79012445 MsG0180004514.01.T01:intron 45.0%
!! TGGTGGGATGATGGATACTT+GGG - Chr1:79014998-79015017 MsG0180004514.01.T01:intron 45.0%
!! TTGTTTTACGGAGGGGTTCT+AGG - Chr1:79012433-79012452 MsG0180004514.01.T01:intron 45.0%
!! TTTTATGTGGTGGGAAGGGA+GGG - Chr1:79013411-79013430 MsG0180004514.01.T01:intron 45.0%
!! TTTTGGAAGAGAGGGCTTTG+GGG - Chr1:79008318-79008337 MsG0180004514.01.T01:intron 45.0%
!!! ATAGAGGGGTTTTGGAAGAG+AGG - Chr1:79008309-79008328 MsG0180004514.01.T01:intron 45.0%
!!! ATTTTGACTACCTGGGAAGG+GGG - Chr1:79014242-79014261 MsG0180004514.01.T01:intron 45.0%
!!! CGATTTTGACTACCTGGGAA+GGG - Chr1:79014240-79014259 MsG0180004514.01.T01:intron 45.0%
!!! GATTTTGACTACCTGGGAAG+GGG - Chr1:79014241-79014260 MsG0180004514.01.T01:intron 45.0%
!!! GGATCTCGATTTTGACTACC+TGG - Chr1:79014234-79014253 MsG0180004514.01.T01:intron 45.0%
!!! GGGAGCACTTTTGTCTTCTA+AGG - Chr1:79008887-79008906 MsG0180004514.01.T01:intron 45.0%
!!! GTTTTGGAAGAGAGGGCTTT+GGG - Chr1:79008317-79008336 MsG0180004514.01.T01:intron 45.0%
!!! TAGAGGGGTTTTGGAAGAGA+GGG - Chr1:79008310-79008329 MsG0180004514.01.T01:intron 45.0%
!!! TATTGGAGGAGGGTTTTGGA+GGG + Chr1:79008095-79008114 None:intergenic 45.0%
!!! TCGATTTTGACTACCTGGGA+AGG - Chr1:79014239-79014258 MsG0180004514.01.T01:intron 45.0%
!! GTTATATTATTTAATAAATA+AGG - Chr1:79014004-79014023 MsG0180004514.01.T01:intron 5.0%
!! TTAATCTATTTATATTAAAA+TGG + Chr1:79014551-79014570 None:intergenic 5.0%
!!! ATTAATTTTATTGTTTTTTA+TGG + Chr1:79013967-79013986 None:intergenic 5.0%
!!! GTTATAATTTTATTTATTAT+TGG - Chr1:79011927-79011946 MsG0180004514.01.T01:intron 5.0%
!!! TTAATTTTATTGTTTTTTAT+GGG + Chr1:79013966-79013985 None:intergenic 5.0%
AAGGAATCACTGCCATGGTG+TGG - Chr1:79010197-79010216 MsG0180004514.01.T01:intron 50.0%
ACATTGAGAGGGGAAGGCTT+GGG + Chr1:79008172-79008191 None:intergenic 50.0%
ACCAGCGAGGCCGAAATTTA+TGG - Chr1:79016180-79016199 MsG0180004514.01.T01:intron 50.0%
ACCGAGTTCTGCACAAATCG+GGG + Chr1:79016227-79016246 None:intergenic 50.0%
ACTGATCCAGGAGGAACAGA+AGG + Chr1:79015402-79015421 None:intergenic 50.0%
AGACTCTGTTTGGGAGTTGG+AGG + Chr1:79008544-79008563 None:intergenic 50.0%
AGTAGTTGGGCTTGACCTTC+TGG + Chr1:79012125-79012144 None:intergenic 50.0%
AGTCTCATCTAATGCTGGGC+AGG - Chr1:79016051-79016070 MsG0180004514.01.T01:intron 50.0%
ATCAGCTGGACCAATGGGAT+AGG - Chr1:79015949-79015968 MsG0180004514.01.T01:intron 50.0%
ATCCCACTTTGCTCTCCAGA+AGG - Chr1:79012107-79012126 MsG0180004514.01.T01:intron 50.0%
ATCCCATTGGTCCAGCTGAT+TGG + Chr1:79015949-79015968 None:intergenic 50.0%
ATCTCATGACAGCGGCAGAT+TGG + Chr1:79010476-79010495 None:intergenic 50.0%
ATTTGAAGAATGGGGCGGCA+AGG + Chr1:79011282-79011301 None:intergenic 50.0%
CAGCTGCAAAATGGCCAGTT+TGG + Chr1:79009620-79009639 None:intergenic 50.0%
CCAGAACTAAAGCTGAGGAC+GGG - Chr1:79009654-79009673 MsG0180004514.01.T01:intron 50.0%
CCAGTCGCCATACAACAAAC+AGG - Chr1:79015921-79015940 MsG0180004514.01.T01:intron 50.0%
CCATTGATCAGCTTATGGGG+GGG - Chr1:79012922-79012941 MsG0180004514.01.T01:intron 50.0%
CCCCAAGAAACTCCAGATTC+TGG - Chr1:79016378-79016397 MsG0180004514.01.T01:CDS 50.0%
CCTCTTCTGCCTTTGTTCCA+AGG - Chr1:79011544-79011563 MsG0180004514.01.T01:intron 50.0%
CCTTGGAACAAAGGCAGAAG+AGG + Chr1:79011547-79011566 None:intergenic 50.0%
CGAATCGGAGGATCGTAACA+CGG + Chr1:79014185-79014204 None:intergenic 50.0%
CTGCACAGCATGAACAGAAG+CGG + Chr1:79013598-79013617 None:intergenic 50.0%
CTTTCCTCAGCCTTCCTCTT+CGG + Chr1:79008854-79008873 None:intergenic 50.0%
GACCGAGTTCTGCACAAATC+GGG + Chr1:79016228-79016247 None:intergenic 50.0%
GACGCTTGATCCTTTCACGT+TGG - Chr1:79009072-79009091 MsG0180004514.01.T01:intron 50.0%
GAGGAAAGAATTCGTCGAGG+AGG - Chr1:79008866-79008885 MsG0180004514.01.T01:intron 50.0%
GCCAGAACTAAAGCTGAGGA+CGG - Chr1:79009653-79009672 MsG0180004514.01.T01:intron 50.0%
GCCTAATCTGAACCCTACAC+TGG + Chr1:79011688-79011707 None:intergenic 50.0%
GCTGAGGAAAGAATTCGTCG+AGG - Chr1:79008863-79008882 MsG0180004514.01.T01:intron 50.0%
GCTGCAAAAGATGCAGCTTG+AGG - Chr1:79008738-79008757 MsG0180004514.01.T01:intron 50.0%
GGACCGAGTTCTGCACAAAT+CGG + Chr1:79016229-79016248 None:intergenic 50.0%
GGCAATCCATCAATGGGAGA+CGG + Chr1:79015057-79015076 None:intergenic 50.0%
GGCATGAAGACAATGTGTCG+GGG - Chr1:79015506-79015525 MsG0180004514.01.T01:intron 50.0%
GTTCAACTCCAGACCTCTCT+TGG + Chr1:79011260-79011279 None:intergenic 50.0%
GTTCCAATCAGCTGGACCAA+TGG - Chr1:79015943-79015962 MsG0180004514.01.T01:intron 50.0%
TCAGCTGGACCAATGGGATA+GGG - Chr1:79015950-79015969 MsG0180004514.01.T01:intron 50.0%
TCCATAAATTTCGGCCTCGC+TGG + Chr1:79016184-79016203 None:intergenic 50.0%
TCCTCCAGTACGTCCCTAAA+GGG - Chr1:79016246-79016265 MsG0180004514.01.T01:intron 50.0%
TCTGTCTAGTCATTGCGCCA+TGG + Chr1:79016024-79016043 None:intergenic 50.0%
TGCCCAGCATTAGATGAGAC+TGG + Chr1:79016052-79016071 None:intergenic 50.0%
TGGACACATCCCAAAACCTC+CGG - Chr1:79015207-79015226 MsG0180004514.01.T01:intron 50.0%
TGGTTTGAATGGCTCTCCAG+GGG + Chr1:79012905-79012924 None:intergenic 50.0%
TGTCAGCCGTGCACATGATT+TGG - Chr1:79014800-79014819 MsG0180004514.01.T01:intron 50.0%
TGTTTGGGAGTTTGGAGGGA+GGG - Chr1:79007907-79007926 MsG0180004514.01.T01:CDS 50.0%
TTGATGCCTTCTGTTCCTCC+TGG - Chr1:79015393-79015412 MsG0180004514.01.T01:CDS 50.0%
TTGTTTGGGAGTTTGGAGGG+AGG - Chr1:79007906-79007925 MsG0180004514.01.T01:CDS 50.0%
! AAGCTGCATCTTTTGCAGCC+CGG + Chr1:79008737-79008756 None:intergenic 50.0%
! ACCCCGATTTGTGCAGAACT+CGG - Chr1:79016223-79016242 MsG0180004514.01.T01:intron 50.0%
! ACTACACCATCCGGAGGTTT+TGG + Chr1:79015220-79015239 None:intergenic 50.0%
! AGGGAAGGGGTTGGCAAAAA+AGG + Chr1:79008220-79008239 None:intergenic 50.0%
! ATTTTCCAGGCAGGGTTGTG+AGG + Chr1:79009010-79009029 None:intergenic 50.0%
! CAAAGCATCCTGACCAAGAG+AGG - Chr1:79011244-79011263 MsG0180004514.01.T01:intron 50.0%
! CAGAGTTGTTGTTCACGGGT+CGG - Chr1:79013615-79013634 MsG0180004514.01.T01:CDS 50.0%
! CTACACCATCCGGAGGTTTT+GGG + Chr1:79015219-79015238 None:intergenic 50.0%
! CTGATTCGAATGTCCTGGTG+AGG - Chr1:79009224-79009243 MsG0180004514.01.T01:intron 50.0%
! GAATCGTAATCTGATGGGCG+CGG - Chr1:79013524-79013543 MsG0180004514.01.T01:intron 50.0%
! GACCTTCTGGAGAGCAAAGT+GGG + Chr1:79012112-79012131 None:intergenic 50.0%
! TGACCTTCTGGAGAGCAAAG+TGG + Chr1:79012113-79012132 None:intergenic 50.0%
! TTTGGAAGAGAGGGCTTTGG+GGG - Chr1:79008319-79008338 MsG0180004514.01.T01:intron 50.0%
!! CCTGTTTGTTGTATGGCGAC+TGG + Chr1:79015924-79015943 None:intergenic 50.0%
!! CTGGTGGACTGTAGACGAAT+CGG + Chr1:79014343-79014362 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - Chr1:79007902-79007921 MsG0180004514.01.T01:CDS 50.0%
!! GGTGGGATGATGGATACTTG+GGG - Chr1:79014999-79015018 MsG0180004514.01.T01:intron 50.0%
!! GTATTGGAGGAGGGTTTTGG+AGG + Chr1:79008096-79008115 None:intergenic 50.0%
!! GTGGTGGGATGATGGATACT+TGG - Chr1:79014997-79015016 MsG0180004514.01.T01:intron 50.0%
!! GTTTGGTGCATCAAGTCTGG+AGG - Chr1:79010994-79011013 MsG0180004514.01.T01:intron 50.0%
!! GTTTGTTGTATGGCGACTGG+AGG + Chr1:79015921-79015940 None:intergenic 50.0%
!! GTTTTATGTGGTGGGAAGGG+AGG - Chr1:79013410-79013429 MsG0180004514.01.T01:intron 50.0%
!! TGGGGGGAGGCTTTGAAAAA+AGG - Chr1:79008278-79008297 MsG0180004514.01.T01:CDS 50.0%
!! TTTTGACTACCTGGGAAGGG+GGG - Chr1:79014243-79014262 MsG0180004514.01.T01:intron 50.0%
!!! GGTTTTGGAAGAGAGGGCTT+TGG - Chr1:79008316-79008335 MsG0180004514.01.T01:intron 50.0%
AATCAGCAACGTTTCCCCGG+CGG - Chr1:79008709-79008728 MsG0180004514.01.T01:intron 55.0%
ACAATGTGTCGGGGACAGCA+AGG - Chr1:79015515-79015534 MsG0180004514.01.T01:intron 55.0%
ACCTCTCTCCGATCTTGCCT+AGG - Chr1:79014213-79014232 MsG0180004514.01.T01:intron 55.0%
ACTCCAGACCTCTCTTGGTC+AGG + Chr1:79011255-79011274 None:intergenic 55.0%
AGGCGTCAAGAAGCTGCATC+TGG - Chr1:79016300-79016319 MsG0180004514.01.T01:intron 55.0%
AGGTTGCTCCAACACTCCGT+GGG + Chr1:79015901-79015920 None:intergenic 55.0%
AGTTAGGGGAGCCTGGTACA+AGG - Chr1:79010952-79010971 MsG0180004514.01.T01:intron 55.0%
CAAACTCCCAACAGGCCCTT+AGG - Chr1:79008252-79008271 MsG0180004514.01.T01:CDS 55.0%
CAACAGGCCCTTAGGCTTTG+GGG - Chr1:79008260-79008279 MsG0180004514.01.T01:CDS 55.0%
CACATCCCAAAACCTCCGGA+TGG - Chr1:79015211-79015230 MsG0180004514.01.T01:intron 55.0%
CATCCTGACCAAGAGAGGTC+TGG - Chr1:79011249-79011268 MsG0180004514.01.T01:intron 55.0%
CCAAAGCCTAAGGGCCTGTT+GGG + Chr1:79008261-79008280 None:intergenic 55.0%
CCAACAGGCCCTTAGGCTTT+GGG - Chr1:79008259-79008278 MsG0180004514.01.T01:CDS 55.0%
CCCCCCCATAAGCTGATCAA+TGG + Chr1:79012925-79012944 None:intergenic 55.0%
CGATTCGTCTACAGTCCACC+AGG - Chr1:79014341-79014360 MsG0180004514.01.T01:intron 55.0%
CTAAGGGCCTGTTGGGAGTT+TGG + Chr1:79008254-79008273 None:intergenic 55.0%
CTCATCTAATGCTGGGCAGG+TGG - Chr1:79016054-79016073 MsG0180004514.01.T01:intron 55.0%
GACATTGAGAGGGGAAGGCT+TGG + Chr1:79008173-79008192 None:intergenic 55.0%
GAGATGAGAGCTAGGGCAAG+AGG - Chr1:79010657-79010676 MsG0180004514.01.T01:intron 55.0%
GAGTTTGGAGGGGAAGGGAA+GGG + Chr1:79008239-79008258 None:intergenic 55.0%
GCGTCAAGAAGCTGCATCTG+GGG - Chr1:79016302-79016321 MsG0180004514.01.T01:intron 55.0%
GCTCTCTTTAGCTACCCACG+AGG - Chr1:79009442-79009461 MsG0180004514.01.T01:intron 55.0%
GGAAGAACCTTGAAGCAGGC+AGG + Chr1:79012949-79012968 None:intergenic 55.0%
GGCGTCAAGAAGCTGCATCT+GGG - Chr1:79016301-79016320 MsG0180004514.01.T01:intron 55.0%
GGTATCACTACACCATCCGG+AGG + Chr1:79015226-79015245 None:intergenic 55.0%
GTCCTCCAGTACGTCCCTAA+AGG - Chr1:79016245-79016264 MsG0180004514.01.T01:intron 55.0%
GTTGGGAGTTTGGAGGGGAA+GGG + Chr1:79008244-79008263 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGAG+GGG - Chr1:79007908-79007927 MsG0180004514.01.T01:CDS 55.0%
TCCTAGGCAAGATCGGAGAG+AGG + Chr1:79014217-79014236 None:intergenic 55.0%
TGCAGGACGAAGAACAGCGT+CGG - Chr1:79014752-79014771 MsG0180004514.01.T01:intron 55.0%
TGGACTGTAGACGAATCGGC+AGG + Chr1:79014339-79014358 None:intergenic 55.0%
TGGAGGGAGGGGATGACTTT+GGG - Chr1:79007919-79007938 MsG0180004514.01.T01:CDS 55.0%
TGTTGGGAGTTTGGAGGGGA+AGG + Chr1:79008245-79008264 None:intergenic 55.0%
TGTTTGGGAGTTGGAGGCGA+GGG + Chr1:79008538-79008557 None:intergenic 55.0%
TTCCCCTCCAAACTCCCAAC+AGG - Chr1:79008244-79008263 MsG0180004514.01.T01:CDS 55.0%
TTGAACCTCACAACCCTGCC+TGG - Chr1:79009002-79009021 MsG0180004514.01.T01:intron 55.0%
TTGGAGGGAGGGGATGACTT+TGG - Chr1:79007918-79007937 MsG0180004514.01.T01:CDS 55.0%
TTTGACTACCTGGGAAGGGG+GGG - Chr1:79014244-79014263 MsG0180004514.01.T01:intron 55.0%
TTTGCCGATCTTGTCACCCC+TGG - Chr1:79013483-79013502 MsG0180004514.01.T01:intron 55.0%
! AACAGGCCCTTAGGCTTTGG+GGG - Chr1:79008261-79008280 MsG0180004514.01.T01:CDS 55.0%
! CATCCCTCCTGCCAGGTTTT+GGG + Chr1:79014480-79014499 None:intergenic 55.0%
! CCCGTCCTCAGCTTTAGTTC+TGG + Chr1:79009657-79009676 None:intergenic 55.0%
! GTAATCTGATGGGCGCGGTA+AGG - Chr1:79013529-79013548 MsG0180004514.01.T01:intron 55.0%
! GTCGGCTTCTGCAGCATGTT+TGG - Chr1:79010786-79010805 MsG0180004514.01.T01:intron 55.0%
! TCCCTTTAGGGACGTACTGG+AGG + Chr1:79016250-79016269 None:intergenic 55.0%
!! AATGGCTTGCTGCGCATTCC+TGG - Chr1:79012597-79012616 MsG0180004514.01.T01:intron 55.0%
!! TTGGAAGAGAGGGCTTTGGG+GGG - Chr1:79008320-79008339 MsG0180004514.01.T01:intron 55.0%
AAGCCTCCCCCCAAAGCCTA+AGG + Chr1:79008271-79008290 None:intergenic 60.0%
AATTTCGGCCTCGCTGGTGC+AGG + Chr1:79016178-79016197 None:intergenic 60.0%
AGCCTCCCCCCAAAGCCTAA+GGG + Chr1:79008270-79008289 None:intergenic 60.0%
AGGGCCTGTTGGGAGTTTGG+AGG + Chr1:79008251-79008270 None:intergenic 60.0%
AGGTGTGCCCAAAACCTGGC+AGG - Chr1:79014470-79014489 MsG0180004514.01.T01:intron 60.0%
AGTTGGAGGCGAGGGCTTTG+AGG + Chr1:79008530-79008549 None:intergenic 60.0%
CACGCCAGGGGTGACAAGAT+CGG + Chr1:79013490-79013509 None:intergenic 60.0%
CAGGTCAAGTTAGGGGAGCC+TGG - Chr1:79010945-79010964 MsG0180004514.01.T01:CDS 60.0%
CCCAAAGCCTAAGGGCCTGT+TGG + Chr1:79008262-79008281 None:intergenic 60.0%
CCCAACAGGCCCTTAGGCTT+TGG - Chr1:79008258-79008277 MsG0180004514.01.T01:CDS 60.0%
CCTGAGGTGTGCCCAAAACC+TGG - Chr1:79014466-79014485 MsG0180004514.01.T01:intron 60.0%
CTGTTTGGGAGTTGGAGGCG+AGG + Chr1:79008539-79008558 None:intergenic 60.0%
GAAGCCGAAGAGGAAGGCTG+AGG - Chr1:79008847-79008866 MsG0180004514.01.T01:intron 60.0%
GAGGTTGCTCCAACACTCCG+TGG + Chr1:79015902-79015921 None:intergenic 60.0%
GATTGAGACCTGCACCAGCG+AGG - Chr1:79016167-79016186 MsG0180004514.01.T01:intron 60.0%
GGAGTTTGGAGGGGAAGGGA+AGG + Chr1:79008240-79008259 None:intergenic 60.0%
GGCCTGTTGGGAGTTTGGAG+GGG + Chr1:79008249-79008268 None:intergenic 60.0%
GGGAGGGGATGACTTTGGGT+TGG - Chr1:79007923-79007942 MsG0180004514.01.T01:CDS 60.0%
GGGCCTGTTGGGAGTTTGGA+GGG + Chr1:79008250-79008269 None:intergenic 60.0%
GGGGACAGCAAGGAAGGGAA+AGG - Chr1:79015525-79015544 MsG0180004514.01.T01:intron 60.0%
GGGGAGCCTGGTACAAGGAA+AGG - Chr1:79010957-79010976 MsG0180004514.01.T01:intron 60.0%
GTGCCCAAAACCTGGCAGGA+GGG - Chr1:79014474-79014493 MsG0180004514.01.T01:intron 60.0%
GTGTCGGGGACAGCAAGGAA+GGG - Chr1:79015520-79015539 MsG0180004514.01.T01:intron 60.0%
TGGAGGGGAAGGGAAGGGAA+GGG + Chr1:79008234-79008253 None:intergenic 60.0%
TGTGCCCAAAACCTGGCAGG+AGG - Chr1:79014473-79014492 MsG0180004514.01.T01:intron 60.0%
TGTGTCGGGGACAGCAAGGA+AGG - Chr1:79015519-79015538 MsG0180004514.01.T01:intron 60.0%
TTGACTACCTGGGAAGGGGG+GGG - Chr1:79014245-79014264 MsG0180004514.01.T01:intron 60.0%
TTGGAGGGGAAGGGAAGGGA+AGG + Chr1:79008235-79008254 None:intergenic 60.0%
! GCATCCCTCCTGCCAGGTTT+TGG + Chr1:79014481-79014500 None:intergenic 60.0%
! GTTGGAGGCGAGGGCTTTGA+GGG + Chr1:79008529-79008548 None:intergenic 60.0%
!! ACAGGCCCTTAGGCTTTGGG+GGG - Chr1:79008262-79008281 MsG0180004514.01.T01:CDS 60.0%
!! AGGGCTTTGAGGGACGGAAG+TGG + Chr1:79008519-79008538 None:intergenic 60.0%
!! GCTTTGAGGGACGGAAGTGG+AGG + Chr1:79008516-79008535 None:intergenic 60.0%
!!! CCAGGTTTTGGGCACACCTC+AGG + Chr1:79014469-79014488 None:intergenic 60.0%
AACGTTTCCCCGGCGGTTCC+GGG - Chr1:79008716-79008735 MsG0180004514.01.T01:intron 65.0%
ACCATACCCCAGCACGCCAG+GGG + Chr1:79013502-79013521 None:intergenic 65.0%
CAACGTTTCCCCGGCGGTTC+CGG - Chr1:79008715-79008734 MsG0180004514.01.T01:intron 65.0%
CTGGCGTGCTGGGGTATGGT+CGG - Chr1:79013502-79013521 MsG0180004514.01.T01:intron 65.0%
CTTGTCACCCCTGGCGTGCT+GGG - Chr1:79013492-79013511 MsG0180004514.01.T01:intron 65.0%
GACCATACCCCAGCACGCCA+GGG + Chr1:79013503-79013522 None:intergenic 65.0%
GGAGGGGAAGGGAAGGGAAG+GGG + Chr1:79008233-79008252 None:intergenic 65.0%
GGGAAGGGAAGGGAAGGGGT+TGG + Chr1:79008229-79008248 None:intergenic 65.0%
GTAACAACCCCCCCCTTCCC+AGG + Chr1:79014255-79014274 None:intergenic 65.0%
TCTTGTCACCCCTGGCGTGC+TGG - Chr1:79013491-79013510 MsG0180004514.01.T01:intron 65.0%
TTGTCACCCCTGGCGTGCTG+GGG - Chr1:79013493-79013512 MsG0180004514.01.T01:intron 65.0%
! CTTTTGCAGCCCGGAACCGC+CGG + Chr1:79008728-79008747 None:intergenic 65.0%
! GTGGTGGGAAGGGAGGGAGA+GGG - Chr1:79013417-79013436 MsG0180004514.01.T01:intron 65.0%
! TGTGGTGGGAAGGGAGGGAG+AGG - Chr1:79013416-79013435 MsG0180004514.01.T01:intron 65.0%
! TTTTGCAGCCCGGAACCGCC+GGG + Chr1:79008727-79008746 None:intergenic 65.0%
!! GAGGCGAGGGCTTTGAGGGA+CGG + Chr1:79008525-79008544 None:intergenic 65.0%
ACCCCTGGCGTGCTGGGGTA+TGG - Chr1:79013498-79013517 MsG0180004514.01.T01:intron 70.0%
CGACCATACCCCAGCACGCC+AGG + Chr1:79013504-79013523 None:intergenic 70.0%
GCAGCTGCATCCCTCCTGCC+AGG + Chr1:79014487-79014506 None:intergenic 70.0%
GGGAAGGGAGGGAGAGGGCA+TGG - Chr1:79013422-79013441 MsG0180004514.01.T01:intron 70.0%
GGGGGGTCCTGCCTGCTTCA+AGG - Chr1:79012939-79012958 MsG0180004514.01.T01:intron 70.0%
TTTGCAGCCCGGAACCGCCG+GGG + Chr1:79008726-79008745 None:intergenic 70.0%
!! GGCCCTTAGGCTTTGGGGGG+AGG - Chr1:79008265-79008284 MsG0180004514.01.T01:CDS 70.0%
GGGCGCGGTAAGGATCGCCG+CGG - Chr1:79013539-79013558 MsG0180004514.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 79007886 79016410 79007886 ID=MsG0180004514.01;Name=MsG0180004514.01
Chr1 mRNA 79007886 79016410 79007886 ID=MsG0180004514.01.T01;Parent=MsG0180004514.01;Name=MsG0180004514.01.T01;_AED=0.46;_eAED=0.49;_QI=0|0|0.25|0.91|1|1|12|0|361
Chr1 exon 79016356 79016410 79016356 ID=MsG0180004514.01.T01:exon:15315;Parent=MsG0180004514.01.T01
Chr1 exon 79015534 79015613 79015534 ID=MsG0180004514.01.T01:exon:15314;Parent=MsG0180004514.01.T01
Chr1 exon 79015314 79015456 79015314 ID=MsG0180004514.01.T01:exon:15313;Parent=MsG0180004514.01.T01
Chr1 exon 79014578 79014638 79014578 ID=MsG0180004514.01.T01:exon:15312;Parent=MsG0180004514.01.T01
Chr1 exon 79014055 79014132 79014055 ID=MsG0180004514.01.T01:exon:15311;Parent=MsG0180004514.01.T01
Chr1 exon 79013578 79013657 79013578 ID=MsG0180004514.01.T01:exon:15310;Parent=MsG0180004514.01.T01
Chr1 exon 79013254 79013338 79013254 ID=MsG0180004514.01.T01:exon:15309;Parent=MsG0180004514.01.T01
Chr1 exon 79011048 79011111 79011048 ID=MsG0180004514.01.T01:exon:15308;Parent=MsG0180004514.01.T01
Chr1 exon 79010891 79010964 79010891 ID=MsG0180004514.01.T01:exon:15307;Parent=MsG0180004514.01.T01
Chr1 exon 79008435 79008539 79008435 ID=MsG0180004514.01.T01:exon:15306;Parent=MsG0180004514.01.T01
Chr1 exon 79008174 79008325 79008174 ID=MsG0180004514.01.T01:exon:15305;Parent=MsG0180004514.01.T01
Chr1 exon 79007886 79007994 79007886 ID=MsG0180004514.01.T01:exon:15304;Parent=MsG0180004514.01.T01
Chr1 CDS 79016356 79016410 79016356 ID=MsG0180004514.01.T01:cds;Parent=MsG0180004514.01.T01
Chr1 CDS 79015534 79015613 79015534 ID=MsG0180004514.01.T01:cds;Parent=MsG0180004514.01.T01
Chr1 CDS 79015314 79015456 79015314 ID=MsG0180004514.01.T01:cds;Parent=MsG0180004514.01.T01
Chr1 CDS 79014578 79014638 79014578 ID=MsG0180004514.01.T01:cds;Parent=MsG0180004514.01.T01
Chr1 CDS 79014055 79014132 79014055 ID=MsG0180004514.01.T01:cds;Parent=MsG0180004514.01.T01
Chr1 CDS 79013578 79013657 79013578 ID=MsG0180004514.01.T01:cds;Parent=MsG0180004514.01.T01
Chr1 CDS 79013254 79013338 79013254 ID=MsG0180004514.01.T01:cds;Parent=MsG0180004514.01.T01
Chr1 CDS 79011048 79011111 79011048 ID=MsG0180004514.01.T01:cds;Parent=MsG0180004514.01.T01
Chr1 CDS 79010891 79010964 79010891 ID=MsG0180004514.01.T01:cds;Parent=MsG0180004514.01.T01
Chr1 CDS 79008435 79008539 79008435 ID=MsG0180004514.01.T01:cds;Parent=MsG0180004514.01.T01
Chr1 CDS 79008174 79008325 79008174 ID=MsG0180004514.01.T01:cds;Parent=MsG0180004514.01.T01
Chr1 CDS 79007886 79007994 79007886 ID=MsG0180004514.01.T01:cds;Parent=MsG0180004514.01.T01
Gene Sequence

>MsG0180004514.01.T01

ATGTTTTTGTCCTTAAGGCTTTGTTTGGGAGTTTGGAGGGAGGGGATGACTTTGGATGGTGTTGCACCAAGAGCCAAAATGAATCAGCAACGTTTCCCCGGCGGTTCCGGGCTGCAAAAGATGCAGCTTGAGGCTCATTACAGAAGCCGAAGAGGAAGGCTGAGGAAAGAATTCGTCGAGGAGGGAGCACTTTTGTCTTCTAAGGACAAGCCTGAGACTTCAGACTCAAATGTCATTACCCCCTGTACTAATTATGGCATCTCTGTCATGGCTCTTCAAACTAAAGCTGAGGACGGGAATCCTGCTGATGAAATCCCTATTCGCAAGAAGAAATATCAGGGAGCTATAAATTTACTGATGCATATCTATAGAAAGGAATCACTGCCATGGTGTGGTTATCTTACTTATGCGGGTGAGGTGGCAGAAAATAATGAAGAGATGAGAGCTAGGGCAAGAGGAGTAATACTTCAGAGCCACGGGCCTCATTTTCTGATAAGGGGAGCCTGGTACAAGGAAAGGTATTATGTTGAAAAGTTTGGTGCATCAAGTCTGGAGGAGATTGATAAAATTAAGAAAGATATAGATACCTTTTTGACAGATTTTGAGATTGATAGAATGGAAAACGATTTGCATGGCAGGTATTACAGTGTTGCCAAATTGCCATTTATGATGAGAAAGAAATTGCTTGCTTCCACAAGGAAGCTTGAAGACACATTAACGATGCATGAAACGTGCCCTTACTTTTGTGTATGTGATGCATCTGATAGGTCACAAGTATCTGGAGCAATAACTGGATCTCAATTAGGAGAAGCAGCTCATCGTCTCGGAAAATATTCTGGCGAGAACAATAACAGTTATTATGGAGAACATAATCACCATGGCGCAATGACTAGACAGAGATATCCAGTCTCATCTAATGCTGGGCAGGTGGACAGACAAAATTTTAGAACACAAGATAGGCCAAGGCATCAAGAACAGCGTCAAGAAGCTGCATCTGGGGCAGTGCCTCATCATAAGCAGATAAAGAAGGTTTACCAAGTTAAAAAACGTTTGCCCCAAGAAACTCCAGATTCTGGTAATCAATAG
Protein sequence

>MsG0180004514.01.T01

MFLSLRLCLGVWREGMTLDGVAPRAKMNQQRFPGGSGLQKMQLEAHYRSRRGRLRKEFVEEGALLSSKDKPETSDSNVITPCTNYGISVMALQTKAEDGNPADEIPIRKKKYQGAINLLMHIYRKESLPWCGYLTYAGEVAENNEEMRARARGVILQSHGPHFLIRGAWYKERYYVEKFGASSLEEIDKIKKDIDTFLTDFEIDRMENDLHGRYYSVAKLPFMMRKKLLASTRKLEDTLTMHETCPYFCVCDASDRSQVSGAITGSQLGEAAHRLGKYSGENNNSYYGEHNHHGAMTRQRYPVSSNAGQVDRQNFRTQDRPRHQEQRQEAASGAVPHHKQIKKVYQVKKRLPQETPDSGNQ*