AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004833.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004833.01.T01 MTR_1g088170 98.250 800 14 0 1 800 1 800 0.0 1632
MsG0180004833.01.T01 MTR_7g108930 87.069 812 102 1 1 812 1 809 0.0 1484
MsG0180004833.01.T01 MTR_2g044070 71.056 805 228 3 7 810 4 804 0.0 1207
MsG0180004833.01.T01 MTR_4g124660 71.731 803 222 3 6 807 5 803 0.0 1199
MsG0180004833.01.T01 MTR_4g124660 71.467 750 209 3 6 754 5 750 0.0 1113
MsG0180004833.01.T01 MTR_5g076830 56.473 811 352 1 1 810 1 811 0.0 956
MsG0180004833.01.T01 MTR_3g064610 56.634 814 347 3 1 808 1 814 0.0 954
MsG0180004833.01.T01 MTR_6g478030 61.280 625 242 0 131 755 896 1520 0.0 788
MsG0180004833.01.T01 MTR_6g478000 49.373 798 333 3 13 809 15 742 0.0 780
MsG0180004833.01.T01 MTR_6g478020 58.286 175 73 0 635 809 1 175 1.05e-65 239
MsG0180004833.01.T01 MTR_0277s0020 48.795 166 53 1 644 809 1160 1293 1.55e-43 171
MsG0180004833.01.T01 MTR_5g091340 26.204 519 315 18 282 757 171 664 1.50e-35 145
MsG0180004833.01.T01 MTR_3g047380 24.151 530 355 15 282 778 167 682 4.62e-34 141
MsG0180004833.01.T01 MTR_4g115620 25.424 531 336 16 282 775 168 675 1.42e-33 139
MsG0180004833.01.T01 MTR_0419s0050 41.509 159 33 2 579 737 1 99 1.04e-30 116
MsG0180004833.01.T01 MTR_0277s0030 55.882 68 30 0 579 646 1 68 1.46e-16 80.1
MsG0180004833.01.T01 MTR_4g133550 66.667 48 16 0 81 128 53 100 4.08e-15 72.4
MsG0180004833.01.T01 MTR_0419s0010 39.655 58 35 0 743 800 12 69 3.62e-13 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004833.01.T01 AT4G02280 82.010 806 145 0 5 810 4 809 0.0 1422
MsG0180004833.01.T01 AT5G49190 75.592 803 194 2 9 810 5 806 0.0 1295
MsG0180004833.01.T01 AT5G49190 76.148 784 185 2 28 810 14 796 0.0 1275
MsG0180004833.01.T01 AT5G49190 77.537 739 166 0 72 810 2 740 0.0 1237
MsG0180004833.01.T01 AT3G43190 70.186 805 235 3 7 810 8 808 0.0 1190
MsG0180004833.01.T01 AT3G43190 70.186 805 235 3 7 810 8 808 0.0 1190
MsG0180004833.01.T01 AT5G20830 68.696 805 247 3 7 810 8 808 0.0 1149
MsG0180004833.01.T01 AT5G20830 68.696 805 247 3 7 810 8 808 0.0 1149
MsG0180004833.01.T01 AT5G20830 68.696 805 247 3 7 810 8 808 0.0 1149
MsG0180004833.01.T01 AT1G73370 56.242 809 353 1 2 809 4 812 0.0 956
MsG0180004833.01.T01 AT1G73370 56.242 809 353 1 2 809 4 812 0.0 956
MsG0180004833.01.T01 AT1G73370 58.073 768 321 1 43 809 1 768 0.0 942
MsG0180004833.01.T01 AT5G37180 53.817 799 365 2 12 809 7 802 0.0 912
MsG0180004833.01.T01 AT5G37180 60.098 614 245 0 196 809 1 614 0.0 805
MsG0180004833.01.T01 AT5G37180 61.871 556 212 0 254 809 1 556 0.0 755
MsG0180004833.01.T01 AT4G10120 27.455 499 325 16 282 757 23 507 8.81e-39 155
MsG0180004833.01.T01 AT4G10120 27.327 505 318 17 282 757 197 681 1.51e-38 155
MsG0180004833.01.T01 AT4G10120 27.327 505 318 17 282 757 197 681 1.51e-38 155
MsG0180004833.01.T01 AT4G10120 27.327 505 318 17 282 757 197 681 1.51e-38 155
MsG0180004833.01.T01 AT4G10120 27.066 484 306 15 301 757 17 480 1.08e-37 152
MsG0180004833.01.T01 AT5G11110 26.628 522 339 15 282 777 177 680 1.85e-37 152
MsG0180004833.01.T01 AT1G04920 26.515 528 339 17 282 775 172 684 5.65e-36 147
MsG0180004833.01.T01 AT5G20280 26.217 534 327 18 282 775 170 676 5.21e-32 134

Find 209 sgRNAs with CRISPR-Local

Find 433 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCTCCTCATGGTTATTT+TGG 0.088686 1:+83351781 MsG0180004833.01.T01:CDS
ATCTTTACTGGCTTGTAAAT+TGG 0.109432 1:+83352636 MsG0180004833.01.T01:CDS
TGGCGGGAGTTTATAGTTTC+TGG 0.199745 1:+83354679 MsG0180004833.01.T01:CDS
TCACCAAATCACGGTATTTA+AGG 0.210066 1:-83354761 None:intergenic
TTACTCTTCCTGGGCTCTAT+AGG 0.224175 1:+83353428 MsG0180004833.01.T01:CDS
ATCCAGATTCAGGTACTTAT+TGG 0.227226 1:+83352808 MsG0180004833.01.T01:CDS
TTCGTCCACGACCTGGTATT+TGG 0.230067 1:+83350829 MsG0180004833.01.T01:CDS
ACACTCACAATTAGAATTCT+AGG 0.238158 1:-83352086 None:intergenic
CTTACGTTCCTGCAATTTCT+TGG 0.240946 1:-83352923 None:intergenic
CCTTGCCATGGAGAATATTA+TGG 0.252730 1:-83353952 None:intergenic
AGAAAGGAATTCTTCGTAAA+TGG 0.264525 1:+83352317 MsG0180004833.01.T01:CDS
CATTACGTGCTCTATTTGTT+TGG 0.265179 1:-83354178 None:intergenic
TTCCAAACTTCAGTCTTCTT+TGG 0.273028 1:+83351420 MsG0180004833.01.T01:CDS
GAATCTTGTTGCATCTTTAC+TGG 0.275892 1:+83352624 MsG0180004833.01.T01:CDS
TCTGCTCTTGGACCTTCTTC+AGG 0.283496 1:+83351693 MsG0180004833.01.T01:CDS
TACTCTTCCTGGGCTCTATA+GGG 0.297533 1:+83353429 MsG0180004833.01.T01:CDS
CTCCACTCTGTCTCTGATAC+TGG 0.298003 1:-83348847 None:intergenic
GGTTATCCTGATTTCATCAT+TGG 0.303927 1:+83352586 MsG0180004833.01.T01:CDS
ACCTCTCTTCAATTATGTTT+CGG 0.312764 1:+83351168 MsG0180004833.01.T01:CDS
CCTGCCTTCTACGAAGCTTT+TGG 0.316507 1:+83354326 MsG0180004833.01.T01:CDS
AACAGGTCAGAAGCTTTATC+AGG 0.317722 1:-83354464 None:intergenic
CTTGTCTGAGTGTAGATTAC+AGG 0.327687 1:+83351612 MsG0180004833.01.T01:intron
TCTTTACTGGCTTGTAAATT+GGG 0.331410 1:+83352637 MsG0180004833.01.T01:CDS
AGGCTGAGGATCATCTTTCT+AGG 0.336386 1:+83351446 MsG0180004833.01.T01:CDS
AGTTTCACGCCTCTCTAGTT+TGG 0.336902 1:-83354712 None:intergenic
AGCTATTTCTTCTCTGTCCC+TGG 0.338096 1:-83354087 None:intergenic
CGAGGAAATGAGGCATTAAA+TGG 0.338398 1:-83351095 None:intergenic
AAAACAAAATATCCAGATTC+AGG 0.342109 1:+83352798 MsG0180004833.01.T01:CDS
TATCCTTAAATACCGTGATT+TGG 0.358031 1:+83354758 MsG0180004833.01.T01:CDS
CATGTTGTCCCCTTTGCATC+AGG 0.359532 1:-83352226 None:intergenic
GATAAAATCAGCGCTATTCA+TGG 0.362689 1:-83352886 None:intergenic
ATTATCCAGCACGGTAAATC+AGG 0.364386 1:+83354419 MsG0180004833.01.T01:CDS
CTCCAATAAGTACCTGAATC+TGG 0.376073 1:-83352810 None:intergenic
TCATAATTTGATTGATGAGT+TGG 0.380397 1:+83350318 MsG0180004833.01.T01:CDS
TCGTCCACGACCTGGTATTT+GGG 0.381582 1:+83350830 MsG0180004833.01.T01:CDS
AGAAAAGTCTCTAGTGTAGA+AGG 0.382065 1:-83351724 None:intergenic
TGCAATTTCTTGGTATGTAC+TGG 0.384188 1:-83352913 None:intergenic
ACTTTGAAGGTATGTAGATC+AGG 0.385142 1:+83350276 MsG0180004833.01.T01:intron
TCTGCAGGTTGTATACATAC+TGG 0.387974 1:+83351998 MsG0180004833.01.T01:intron
CACATATTCTAACTCAGAAT+AGG 0.388679 1:-83351485 None:intergenic
CTTGCCATGGAGAATATTAT+GGG 0.395424 1:-83353951 None:intergenic
GTCTTCTTTGGCCAAGGCTG+AGG 0.396024 1:+83351432 MsG0180004833.01.T01:CDS
CTCCGAGCTCACAAATATAA+AGG 0.399926 1:+83351224 MsG0180004833.01.T01:CDS
AATATTCTCCATGGCAAGGC+TGG 0.400381 1:+83353956 MsG0180004833.01.T01:CDS
AAGCATCCATGGCGAGGGTC+AGG 0.401205 1:+83350342 MsG0180004833.01.T01:CDS
GGCCAAAGAAGACTGAAGTT+TGG 0.403898 1:-83351422 None:intergenic
GTCAACCTTGTTGTGGTAGC+TGG 0.405614 1:+83354044 MsG0180004833.01.T01:CDS
ATTACGTGCTCTATTTGTTT+GGG 0.407619 1:-83354177 None:intergenic
GTCCTTGTTTCTTGATCCTA+AGG 0.412477 1:-83352052 None:intergenic
ACCGGGTTGGTAGAAATCTA+TGG 0.413488 1:+83353996 MsG0180004833.01.T01:CDS
AACTCATCAATCAAATTATG+AGG 0.413586 1:-83350316 None:intergenic
GGCCTTTATATTTGTGAGCT+CGG 0.422125 1:-83351226 None:intergenic
CCGTGCTGGATAATCTCAGC+TGG 0.422213 1:-83354410 None:intergenic
TTCAAAGAAGAACTTGTAGA+TGG 0.422520 1:+83350918 MsG0180004833.01.T01:CDS
AACTTGTTTCCCTTCTCTCC+AGG 0.429456 1:+83348895 MsG0180004833.01.T01:CDS
TTGAGAACGAGATGCTCCTT+AGG 0.437006 1:+83352036 MsG0180004833.01.T01:CDS
TAATTTCCAATGATGAAATC+AGG 0.437325 1:-83352592 None:intergenic
CTACAAGTTCTTCTTTGAAG+TGG 0.445349 1:-83350914 None:intergenic
CGCTCATCGTCCATCGGTAA+TGG 0.446682 1:+83351125 MsG0180004833.01.T01:CDS
TTCGTTGCGATGAGCGGAAA+GGG 0.448978 1:-83348874 None:intergenic
ACATATTCTAACTCAGAATA+GGG 0.449719 1:-83351484 None:intergenic
TTTGCCTGACACTGGTGGGC+AGG 0.449737 1:+83351822 MsG0180004833.01.T01:CDS
CTCTGCCAGTGGAACAGACT+TGG 0.450327 1:-83355019 None:intergenic
CACAAAAGGAGGCATAACTA+TGG 0.453330 1:-83350796 None:intergenic
GGTATGTAGATCAGGGGAAA+GGG 0.454593 1:+83350284 MsG0180004833.01.T01:intron
CTGGGAAGTCTAACAAGCTT+AGG 0.456120 1:-83348828 None:intergenic
AGAGACGATGCATCTGCTCT+TGG 0.456776 1:+83351681 MsG0180004833.01.T01:CDS
AACTCAGAATAGGGTGTATC+GGG 0.458194 1:-83351475 None:intergenic
ATGTATTCATCAGTCTGCTC+GGG 0.459021 1:-83353592 None:intergenic
CGAACTGCTATTGCCACAAA+AGG 0.461639 1:-83350810 None:intergenic
ATATATGCACATATCTGCTC+CGG 0.464503 1:-83353500 None:intergenic
AATACCTGCCCACCAGTGTC+AGG 0.465160 1:-83351826 None:intergenic
CACTCGGTCCAGCCTTGCCA+TGG 0.469034 1:-83353964 None:intergenic
GAACAGCAAACTAAGAGAAC+TGG 0.470846 1:+83354022 MsG0180004833.01.T01:CDS
GAGTGTAGATTACAGGGAAT+GGG 0.473453 1:+83351619 MsG0180004833.01.T01:intron
AGGTTAATACCTGATGCAAA+GGG 0.475739 1:+83352217 MsG0180004833.01.T01:intron
TCGCAAAATATGAGTATGTT+CGG 0.478974 1:-83352278 None:intergenic
TTTGGGCAAGCCAATGTCCT+GGG 0.481746 1:+83351799 MsG0180004833.01.T01:CDS
GCAAGGAGGATCCAAGTCAT+TGG 0.483335 1:+83354507 MsG0180004833.01.T01:CDS
TTGGGGTGATACTGCCGAAC+GGG 0.483939 1:+83351654 MsG0180004833.01.T01:CDS
CATGTATTCATCAGTCTGCT+CGG 0.484511 1:-83353593 None:intergenic
ACTTCAGTCTTCTTTGGCCA+AGG 0.485300 1:+83351426 MsG0180004833.01.T01:CDS
GTCTCTAGTGTAGAAGGATC+AGG 0.487242 1:-83351718 None:intergenic
GACGATGAGCGGGTTGGTCG+AGG 0.487361 1:-83351113 None:intergenic
CCGACATTTGCAACTTGCCA+TGG 0.488188 1:+83354383 MsG0180004833.01.T01:CDS
GAAAGGCTCATGACCTTGGC+GGG 0.488477 1:+83354663 MsG0180004833.01.T01:CDS
TAACTCAGAATAGGGTGTAT+CGG 0.489714 1:-83351476 None:intergenic
TTCTGAAAGGCTCATGACCT+TGG 0.490719 1:+83354659 MsG0180004833.01.T01:CDS
AGGTATGTAGATCAGGGGAA+AGG 0.494412 1:+83350283 MsG0180004833.01.T01:intron
AAGACCAAAAGCTTCGTAGA+AGG 0.498943 1:-83354330 None:intergenic
TTCTTCGTAAATGGATCTCA+AGG 0.498970 1:+83352326 MsG0180004833.01.T01:CDS
TGAGTGTAGATTACAGGGAA+TGG 0.500198 1:+83351618 MsG0180004833.01.T01:intron
GGTTGTATACATACTGGATC+AGG 0.501056 1:+83352004 MsG0180004833.01.T01:intron
TAAATCCTGATTTACCGTGC+TGG 0.504758 1:-83354424 None:intergenic
AGTACATACCAAGAAATTGC+AGG 0.507695 1:+83352915 MsG0180004833.01.T01:CDS
TGAAAGGCTCATGACCTTGG+CGG 0.507782 1:+83354662 MsG0180004833.01.T01:CDS
CTGGGTTTGCCTGACACTGG+TGG 0.508833 1:+83351817 MsG0180004833.01.T01:CDS
GAAGCTTTATCAGGGTGATA+AGG 0.509026 1:-83354455 None:intergenic
TGTCGGAAGGCCACAAGTCA+TGG 0.509399 1:-83354366 None:intergenic
GTTGAAAGAATTCAACCAAC+AGG 0.509569 1:-83354481 None:intergenic
CCAGGCCAAGTCTGTTCCAC+TGG 0.511692 1:+83355014 MsG0180004833.01.T01:intron
GAAATTGCTGCCGAGTTACA+AGG 0.515082 1:+83352565 MsG0180004833.01.T01:CDS
GGAGAGACAATATTAAACTT+AGG 0.516919 1:-83353478 None:intergenic
TGGAATAAAATTTCTGATGG+TGG 0.518041 1:+83354527 MsG0180004833.01.T01:CDS
TGTGCGAAAGTCTCAAGAAA+AGG 0.521158 1:-83352361 None:intergenic
AACTAGAGAGGCGTGAAACT+CGG 0.522716 1:+83354715 MsG0180004833.01.T01:CDS
TGGGTTTGCCTGACACTGGT+GGG 0.523461 1:+83351818 MsG0180004833.01.T01:CDS
AAGTTTAATATTGTCTCTCC+CGG 0.523588 1:+83353481 MsG0180004833.01.T01:CDS
CGGTGGCCTGACCCTCGCCA+TGG 0.525782 1:-83350348 None:intergenic
TAAAACCAACCTGGAGAGAA+GGG 0.526938 1:-83348904 None:intergenic
AAGGATCAGGAGCCTGAAGA+AGG 0.527439 1:-83351705 None:intergenic
GTCCTGGGTTTGCCTGACAC+TGG 0.527926 1:+83351814 MsG0180004833.01.T01:CDS
ATAACAACATTGAACACCAT+TGG 0.530283 1:-83351757 None:intergenic
GGGCTCTATAGGGTTGTTCA+CGG 0.530780 1:+83353439 MsG0180004833.01.T01:CDS
TGAATTCTTTCAACGGTGCA+AGG 0.531670 1:+83354490 MsG0180004833.01.T01:CDS
ATCATTGGAAATTATAGCGA+CGG 0.531937 1:+83352601 MsG0180004833.01.T01:CDS
CCAAAAGCTTCGTAGAAGGC+AGG 0.532215 1:-83354326 None:intergenic
TAAGGAGCATCTCGTTCTCA+AGG 0.532416 1:-83352034 None:intergenic
CAAGTCTGTTCCACTGGCAG+AGG 0.532704 1:+83355020 MsG0180004833.01.T01:CDS
TCATTGGAAATTATAGCGAC+GGG 0.534570 1:+83352602 MsG0180004833.01.T01:CDS
AAGCAGCGTGACTCTCATAC+TGG 0.534943 1:-83353405 None:intergenic
CAGATTCAGGTACTTATTGG+AGG 0.536301 1:+83352811 MsG0180004833.01.T01:CDS
ATAAAACCAACCTGGAGAGA+AGG 0.538815 1:-83348905 None:intergenic
AACAAGTTCGTTGCGATGAG+CGG 0.538894 1:-83348880 None:intergenic
CATCGTCTCTAGAACCCGTT+CGG 0.539263 1:-83351668 None:intergenic
CATTGGAATAAAATTTCTGA+TGG 0.540002 1:+83354524 MsG0180004833.01.T01:CDS
GTGCACAATTGCTCATGCAC+TGG 0.541653 1:+83352773 MsG0180004833.01.T01:intron
CTTTGAAGGTATGTAGATCA+GGG 0.541869 1:+83350277 MsG0180004833.01.T01:intron
GTTGTTATATTATCTCCTCA+TGG 0.543390 1:+83351772 MsG0180004833.01.T01:CDS
CATGGAGGATTTATTCTGAA+AGG 0.544374 1:+83354646 MsG0180004833.01.T01:CDS
ATTCCTTTCTCTGATCTGAA+AGG 0.547199 1:-83352304 None:intergenic
TGTTGGTTGAATTCTTTCAA+CGG 0.547518 1:+83354483 MsG0180004833.01.T01:CDS
CGCTACATAGCAGATACAAA+AGG 0.548787 1:+83354212 MsG0180004833.01.T01:CDS
ACATTGATGTAAGCAAGTCC+AGG 0.552666 1:+83354069 MsG0180004833.01.T01:CDS
CAGGTTAATACCTGATGCAA+AGG 0.555779 1:+83352216 MsG0180004833.01.T01:intron
GTTCGTTGCGATGAGCGGAA+AGG 0.555926 1:-83348875 None:intergenic
GTTCCTTTCAGATCAGAGAA+AGG 0.556219 1:+83352301 MsG0180004833.01.T01:CDS
TCCACTCTGTCTCTGATACT+GGG 0.563550 1:-83348846 None:intergenic
ATTACCGATGGACGATGAGC+GGG 0.567606 1:-83351123 None:intergenic
GATGAGTTGGAAAGCATCCA+TGG 0.568034 1:+83350331 MsG0180004833.01.T01:CDS
GGACTTAATGATTTCACCGA+AGG 0.571461 1:-83350389 None:intergenic
TGATAAAGCTTCTGACCTGT+TGG 0.572732 1:+83354466 MsG0180004833.01.T01:CDS
TCTTTCAGAAGGAATACCGT+TGG 0.576677 1:+83353382 MsG0180004833.01.T01:intron
TATATGCACATATCTGCTCC+GGG 0.578308 1:-83353499 None:intergenic
AGAAAGATGATCCTCAGCCT+TGG 0.578335 1:-83351443 None:intergenic
GTCAGGCAAACCCAGGACAT+TGG 0.578603 1:-83351809 None:intergenic
GCGGGTTGGTCGAGGAAATG+AGG 0.579593 1:-83351105 None:intergenic
TAATCTCAGCTGGGCCACCA+TGG 0.581009 1:-83354400 None:intergenic
CAAACAAATAGAGCACGTAA+TGG 0.584019 1:+83354179 MsG0180004833.01.T01:CDS
CGGACATATTCCCAAATACC+AGG 0.586226 1:-83350840 None:intergenic
GTCTTCAAAGAATTTATGAA+AGG 0.589521 1:+83354549 MsG0180004833.01.T01:CDS
TCCGAAACATAATTGAAGAG+AGG 0.590693 1:-83351169 None:intergenic
GACTTAATGATTTCACCGAA+GGG 0.591001 1:-83350388 None:intergenic
CTCCTTAGGATCAAGAAACA+AGG 0.591601 1:+83352050 MsG0180004833.01.T01:CDS
GGAAGTCTAACAAGCTTAGG+AGG 0.593067 1:-83348825 None:intergenic
ACCATAGATTTCTACCAACC+CGG 0.601673 1:-83353997 None:intergenic
CGTGCTGGATAATCTCAGCT+GGG 0.602087 1:-83354409 None:intergenic
TGAAATCATTAAGTCCGCAC+AGG 0.602224 1:+83350396 MsG0180004833.01.T01:CDS
AAAGCCCATAATATTCTCCA+TGG 0.604868 1:+83353947 MsG0180004833.01.T01:CDS
CCATGGCAAGTTGCAAATGT+CGG 0.605739 1:-83354383 None:intergenic
CCATAATATTCTCCATGGCA+AGG 0.606297 1:+83353952 MsG0180004833.01.T01:CDS
TATTCCCAAATACCAGGTCG+TGG 0.607230 1:-83350834 None:intergenic
TGAACAACCCTATAGAGCCC+AGG 0.607833 1:-83353436 None:intergenic
TTGTAAATTGGGAATCACAC+AGG 0.608093 1:+83352648 MsG0180004833.01.T01:CDS
TTTGCATCATCCTCTGCCAG+TGG 0.610442 1:-83355030 None:intergenic
CACCAGTGTCAGGCAAACCC+AGG 0.611890 1:-83351816 None:intergenic
GGCAAGTTGCAAATGTCGGA+AGG 0.612189 1:-83354379 None:intergenic
GTTGGAAAGCATCCATGGCG+AGG 0.612728 1:+83350336 MsG0180004833.01.T01:CDS
TTGTCTGAGTGTAGATTACA+GGG 0.612749 1:+83351613 MsG0180004833.01.T01:intron
TTGGAAAGCATCCATGGCGA+GGG 0.612948 1:+83350337 MsG0180004833.01.T01:CDS
CAAGTGGTACACTGAAAGAT+CGG 0.613499 1:+83353922 MsG0180004833.01.T01:intron
ATAGCAGTTCGTCCACGACC+TGG 0.614926 1:+83350822 MsG0180004833.01.T01:CDS
ACTGCTATTGCCACAAAAGG+AGG 0.618678 1:-83350807 None:intergenic
ACATTTGCAACTTGCCATGG+TGG 0.619282 1:+83354386 MsG0180004833.01.T01:CDS
AGTATCAGAGACAGAGTGGA+GGG 0.619953 1:+83348849 MsG0180004833.01.T01:CDS
ATCAGGATAACCTTGTAACT+CGG 0.630740 1:-83352575 None:intergenic
TCCCAGTATCAGAGACAGAG+TGG 0.631358 1:+83348845 MsG0180004833.01.T01:CDS
AAACTGAACACCATTACCGA+TGG 0.631475 1:-83351135 None:intergenic
AAGGAGCATCTCGTTCTCAA+GGG 0.633278 1:-83352033 None:intergenic
AGAACTGGTCAACCTTGTTG+TGG 0.634919 1:+83354037 MsG0180004833.01.T01:CDS
CCAACCCGCTCATCGTCCAT+CGG 0.636149 1:+83351119 MsG0180004833.01.T01:CDS
ACAGGTCAGAAGCTTTATCA+GGG 0.640651 1:-83354463 None:intergenic
CTTTATATTTGTGAGCTCGG+AGG 0.643718 1:-83351223 None:intergenic
CATTACCGATGGACGATGAG+CGG 0.646853 1:-83351124 None:intergenic
GAAACTATAAACTCCCGCCA+AGG 0.650912 1:-83354676 None:intergenic
TTATATCACTCACCAAATCA+CGG 0.651236 1:-83354770 None:intergenic
ACTTAATGATTTCACCGAAG+GGG 0.651490 1:-83350387 None:intergenic
CATTGATGTAAGCAAGTCCA+GGG 0.655014 1:+83354070 MsG0180004833.01.T01:CDS
CAGTATCAGAGACAGAGTGG+AGG 0.660216 1:+83348848 MsG0180004833.01.T01:CDS
GTTGGGGTGATACTGCCGAA+CGG 0.660525 1:+83351653 MsG0180004833.01.T01:CDS
GTTGTGGAGGCCATGACTTG+TGG 0.664610 1:+83354356 MsG0180004833.01.T01:CDS
TGTATTCATCAGTCTGCTCG+GGG 0.664872 1:-83353591 None:intergenic
GTGACTCTCATACTGGCCAA+CGG 0.670747 1:-83353398 None:intergenic
TTTGAAGGTATGTAGATCAG+GGG 0.670764 1:+83350278 MsG0180004833.01.T01:intron
AGTATGTCTCCAAACTAGAG+AGG 0.671293 1:+83354703 MsG0180004833.01.T01:CDS
CAATATTCAGGTACACATGG+AGG 0.677301 1:+83354631 MsG0180004833.01.T01:intron
CCATGGTAAGTTCACCTGTG+CGG 0.677824 1:-83350410 None:intergenic
CCGATGGACGATGAGCGGGT+TGG 0.681675 1:-83351119 None:intergenic
GCTCGGAGGAAATTAAGCAA+AGG 0.685056 1:-83351209 None:intergenic
TGTAACCAGCTACCACAACA+AGG 0.689782 1:-83354049 None:intergenic
AAACAATATTCAGGTACACA+TGG 0.690968 1:+83354628 MsG0180004833.01.T01:intron
AAAAGACTTACAGCTCTGCA+CGG 0.694008 1:+83353544 MsG0180004833.01.T01:CDS
TGGCGAGGGTCAGGCCACCG+AGG 0.694360 1:+83350351 MsG0180004833.01.T01:CDS
CCAGCTGAGATTATCCAGCA+CGG 0.697179 1:+83354410 MsG0180004833.01.T01:CDS
GGTTAATACCTGATGCAAAG+GGG 0.701188 1:+83352218 MsG0180004833.01.T01:intron
GGATCTCAAGGTTTGATGTG+TGG 0.703341 1:+83352338 MsG0180004833.01.T01:CDS
TAAGTTCGAAAACATGCACA+CGG 0.712759 1:-83350860 None:intergenic
ATTCTTTCAACGGTGCAAGG+AGG 0.717017 1:+83354493 MsG0180004833.01.T01:CDS
GCTTGCCCAAAATAACCATG+AGG 0.738781 1:-83351787 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATGTTTATATAAACA+AGG - Chr1:83353001-83353020 None:intergenic 10.0%
!! ATAAAAACATATAAATTAGA+TGG + Chr1:83354134-83354153 MsG0180004833.01.T01:CDS 10.0%
!! ATAAATGTTTATATAAACAA+GGG - Chr1:83353000-83353019 None:intergenic 10.0%
!! AAGGTAAAGTAATTTATATT+TGG - Chr1:83349130-83349149 None:intergenic 15.0%
!! AGATTATCTTTGATAAAAAT+CGG + Chr1:83351510-83351529 MsG0180004833.01.T01:intron 15.0%
!! ATAAACTTGTAAAATGATAA+CGG + Chr1:83349612-83349631 MsG0180004833.01.T01:intron 15.0%
!!! AAAAAGTTTTAGGAAATTAT+AGG + Chr1:83354890-83354909 MsG0180004833.01.T01:intron 15.0%
!!! AAAAGTTTTAGGAAATTATA+GGG + Chr1:83354891-83354910 MsG0180004833.01.T01:intron 15.0%
!!! TTAGTATTAGATTTGTTATT+AGG - Chr1:83354962-83354981 None:intergenic 15.0%
!!! TTGCATTATAATTTTTAATC+TGG + Chr1:83351864-83351883 MsG0180004833.01.T01:intron 15.0%
!! AAAAATTATTCTTGAGATCA+AGG + Chr1:83349999-83350018 MsG0180004833.01.T01:intron 20.0%
!! ATATTATCCAACATTATAAG+AGG - Chr1:83350438-83350457 None:intergenic 20.0%
!! ATCATACATATATCTCATTA+TGG + Chr1:83353187-83353206 MsG0180004833.01.T01:intron 20.0%
!! TATGATTAAAAGTGAGTTAA+AGG - Chr1:83349149-83349168 None:intergenic 20.0%
!! TATTATCCAACATTATAAGA+GGG - Chr1:83350437-83350456 None:intergenic 20.0%
!! TATTGAACAAATTCTGAATT+TGG + Chr1:83353628-83353647 MsG0180004833.01.T01:intron 20.0%
!! TATTGCAAAAACTAAGAAAA+GGG - Chr1:83350955-83350974 None:intergenic 20.0%
!!! AACAAGATAATTTTCGTTTT+TGG + Chr1:83350029-83350048 MsG0180004833.01.T01:intron 20.0%
!!! AACAATTTTTTTGCAATTCT+CGG - Chr1:83349713-83349732 None:intergenic 20.0%
!!! AAGAGTATTATGTAGAAAAA+TGG - Chr1:83353228-83353247 None:intergenic 20.0%
!!! AAGTACTGATTTATTGATTA+TGG + Chr1:83350208-83350227 MsG0180004833.01.T01:intron 20.0%
!!! AATGCAAAAGTGATTATTTT+AGG + Chr1:83349767-83349786 MsG0180004833.01.T01:intron 20.0%
!!! ATTTTAAAATCTCATTCTCA+AGG - Chr1:83349750-83349769 None:intergenic 20.0%
!!! ATTTTTATGTCTAAACGAAA+AGG + Chr1:83350556-83350575 MsG0180004833.01.T01:intron 20.0%
!!! GAACAGATAAAAAAAGTTTT+AGG + Chr1:83354880-83354899 MsG0180004833.01.T01:intron 20.0%
!!! GTGATTATTTTAGGATTTAA+AGG + Chr1:83349776-83349795 MsG0180004833.01.T01:intron 20.0%
!!! TAGTTTAATTTTTGTTGTGA+AGG + Chr1:83352189-83352208 MsG0180004833.01.T01:intron 20.0%
!!! TTAGATTTGTTATTAGGAAT+AGG - Chr1:83354956-83354975 None:intergenic 20.0%
!!! TTGAATTTATTTTACACAAC+AGG + Chr1:83351036-83351055 MsG0180004833.01.T01:intron 20.0%
!!! TTTTAAAATCTCATTCTCAA+GGG - Chr1:83349749-83349768 None:intergenic 20.0%
! AAAATTGAAACTTGCATACT+TGG + Chr1:83350693-83350712 MsG0180004833.01.T01:intron 25.0%
! AACTCATCAATCAAATTATG+AGG - Chr1:83350319-83350338 None:intergenic 25.0%
! AATTTAGCAAAAATCACACT+TGG - Chr1:83349272-83349291 None:intergenic 25.0%
! ACATATTCTAACTCAGAATA+GGG - Chr1:83351487-83351506 None:intergenic 25.0%
! ACTAATTAAGGATGAAGTAT+AGG - Chr1:83350491-83350510 None:intergenic 25.0%
! ACTTATAGAGTGACTAATTA+AGG - Chr1:83350503-83350522 None:intergenic 25.0%
! ATGACTTCTTATCTTAGTTT+AGG + Chr1:83352444-83352463 MsG0180004833.01.T01:intron 25.0%
! CAACATAAAAGTTCATAACA+GGG - Chr1:83352418-83352437 None:intergenic 25.0%
! CATGTTATCTTAAACATGAT+TGG + Chr1:83353091-83353110 MsG0180004833.01.T01:intron 25.0%
! CATTGGAATAAAATTTCTGA+TGG + Chr1:83354524-83354543 MsG0180004833.01.T01:CDS 25.0%
! CTATTGCAAAAACTAAGAAA+AGG - Chr1:83350956-83350975 None:intergenic 25.0%
! GACACAACTAATTATCTTAT+AGG - Chr1:83353155-83353174 None:intergenic 25.0%
! GAGATATATGTATGATCAAT+GGG - Chr1:83353183-83353202 None:intergenic 25.0%
! GTAATAAGCAAACAATATTC+AGG + Chr1:83354619-83354638 MsG0180004833.01.T01:intron 25.0%
! GTCTTCAAAGAATTTATGAA+AGG + Chr1:83354549-83354568 MsG0180004833.01.T01:CDS 25.0%
! TAACCTGAAATTCAAAATGT+TGG + Chr1:83348989-83349008 MsG0180004833.01.T01:intron 25.0%
! TAAGTTTGATGAAATCAATG+TGG + Chr1:83349310-83349329 MsG0180004833.01.T01:intron 25.0%
! TAATTTCCAATGATGAAATC+AGG - Chr1:83352595-83352614 None:intergenic 25.0%
! TAGCAAAATCATTAGAAAGA+GGG - Chr1:83353308-83353327 None:intergenic 25.0%
! TCATAATTTGATTGATGAGT+TGG + Chr1:83350318-83350337 MsG0180004833.01.T01:CDS 25.0%
! TCCATATCTTTCAAAGTAAT+AGG + Chr1:83353671-83353690 MsG0180004833.01.T01:intron 25.0%
! TGAGATATATGTATGATCAA+TGG - Chr1:83353184-83353203 None:intergenic 25.0%
! TTAGCAAAATCATTAGAAAG+AGG - Chr1:83353309-83353328 None:intergenic 25.0%
! TTGGATAATATTCGACAATT+TGG + Chr1:83350447-83350466 MsG0180004833.01.T01:intron 25.0%
!! ACATTTTGTATTCTGTTAAG+TGG + Chr1:83350058-83350077 MsG0180004833.01.T01:intron 25.0%
!! ATGAAAGGTATATATGATCT+TGG + Chr1:83354564-83354583 MsG0180004833.01.T01:intron 25.0%
!! CAATCATGTTTAAGATAACA+TGG - Chr1:83353093-83353112 None:intergenic 25.0%
!! CATTTTGTATTCTGTTAAGT+GGG + Chr1:83350059-83350078 MsG0180004833.01.T01:intron 25.0%
!! GAAATTTTATTCCAATGACT+TGG - Chr1:83354521-83354540 None:intergenic 25.0%
!! TCAGAAGAATTGATTCTAAT+TGG + Chr1:83349018-83349037 MsG0180004833.01.T01:intron 25.0%
!! TGTGTTCAAATCTTTTGTAT+TGG + Chr1:83351928-83351947 MsG0180004833.01.T01:intron 25.0%
!! TTGTAACGAAAATCAGTTTT+TGG - Chr1:83349929-83349948 None:intergenic 25.0%
!!! CTTTTCTTAGTTTTTGCAAT+AGG + Chr1:83350954-83350973 MsG0180004833.01.T01:intron 25.0%
!!! TATAGGGTTGATATAATGAA+GGG + Chr1:83354907-83354926 MsG0180004833.01.T01:intron 25.0%
!!! TTATAGGGTTGATATAATGA+AGG + Chr1:83354906-83354925 MsG0180004833.01.T01:intron 25.0%
AAAAGGAAATAAAACCAACC+TGG - Chr1:83348916-83348935 None:intergenic 30.0%
AAACAATATTCAGGTACACA+TGG + Chr1:83354628-83354647 MsG0180004833.01.T01:intron 30.0%
AAGTTTAATATTGTCTCTCC+CGG + Chr1:83353481-83353500 MsG0180004833.01.T01:CDS 30.0%
AATTTACAAATGATGTCTGC+AGG - Chr1:83354282-83354301 None:intergenic 30.0%
ACAAAAGATTACATGCTTGT+TGG - Chr1:83349564-83349583 None:intergenic 30.0%
ACACTCACAATTAGAATTCT+AGG - Chr1:83352089-83352108 None:intergenic 30.0%
ACATTAGATTCACATTTCCA+TGG - Chr1:83352706-83352725 None:intergenic 30.0%
ACCTCTCTTCAATTATGTTT+CGG + Chr1:83351168-83351187 MsG0180004833.01.T01:CDS 30.0%
ACTGTGAAATTAAAGAAGCT+AGG + Chr1:83349467-83349486 MsG0180004833.01.T01:intron 30.0%
AGAAAGGAATTCTTCGTAAA+TGG + Chr1:83352317-83352336 MsG0180004833.01.T01:CDS 30.0%
ATAACAACATTGAACACCAT+TGG - Chr1:83351760-83351779 None:intergenic 30.0%
ATCATTGGAAATTATAGCGA+CGG + Chr1:83352601-83352620 MsG0180004833.01.T01:CDS 30.0%
ATCTGTTCAAACAGAAAAGT+TGG - Chr1:83354868-83354887 None:intergenic 30.0%
ATGATTTCATCAAACTTAGC+GGG - Chr1:83349222-83349241 None:intergenic 30.0%
ATTAAAGAAGCTAGGAATTG+TGG + Chr1:83349475-83349494 MsG0180004833.01.T01:intron 30.0%
ATTACGTGCTCTATTTGTTT+GGG - Chr1:83354180-83354199 None:intergenic 30.0%
CAAAAGATTACATGCTTGTT+GGG - Chr1:83349563-83349582 None:intergenic 30.0%
CAACCTCTAATCATTCAATT+AGG - Chr1:83353697-83353716 None:intergenic 30.0%
CACATATTCTAACTCAGAAT+AGG - Chr1:83351488-83351507 None:intergenic 30.0%
CATAATCATAAGTGGGAATT+GGG - Chr1:83351362-83351381 None:intergenic 30.0%
CATCACTTCATTACAAGAAA+AGG - Chr1:83351279-83351298 None:intergenic 30.0%
CATGATTTCATCAAACTTAG+CGG - Chr1:83349223-83349242 None:intergenic 30.0%
CCAACATAAAAGTTCATAAC+AGG - Chr1:83352419-83352438 None:intergenic 30.0%
CTTCACATATGAAAAAAGTG+AGG - Chr1:83353836-83353855 None:intergenic 30.0%
CTTCTGATATTGAAACTTAC+TGG + Chr1:83352729-83352748 MsG0180004833.01.T01:intron 30.0%
GATAATATTCGACAATTTGG+TGG + Chr1:83350450-83350469 MsG0180004833.01.T01:intron 30.0%
GCAATTGTGCACTATAAATA+TGG - Chr1:83352765-83352784 None:intergenic 30.0%
GGAGAGACAATATTAAACTT+AGG - Chr1:83353481-83353500 None:intergenic 30.0%
GTTGTTATATTATCTCCTCA+TGG + Chr1:83351772-83351791 MsG0180004833.01.T01:CDS 30.0%
GTTTCGGAAAAAAGATTCAT+TGG + Chr1:83351184-83351203 MsG0180004833.01.T01:CDS 30.0%
TAAGTTTGATGAAATCATGG+TGG + Chr1:83349224-83349243 MsG0180004833.01.T01:intron 30.0%
TACAAAAGATTTGAACACAC+TGG - Chr1:83351927-83351946 None:intergenic 30.0%
TATCCTTAAATACCGTGATT+TGG + Chr1:83354758-83354777 MsG0180004833.01.T01:CDS 30.0%
TATGTCTAAACGAAAAGGTT+TGG + Chr1:83350561-83350580 MsG0180004833.01.T01:intron 30.0%
TATTGTGTATAAGCATGATC+AGG + Chr1:83351960-83351979 MsG0180004833.01.T01:intron 30.0%
TCGCAAAATATGAGTATGTT+CGG - Chr1:83352281-83352300 None:intergenic 30.0%
TCTAATTGGAAGCTAGAAAT+TGG + Chr1:83349032-83349051 MsG0180004833.01.T01:intron 30.0%
TGAATTTGGTTAGTGTACTT+CGG + Chr1:83353642-83353661 MsG0180004833.01.T01:intron 30.0%
TGGAATAAAATTTCTGATGG+TGG + Chr1:83354527-83354546 MsG0180004833.01.T01:CDS 30.0%
TTAGGAATAGGACATAAAGA+TGG - Chr1:83354944-83354963 None:intergenic 30.0%
TTATATCACTCACCAAATCA+CGG - Chr1:83354773-83354792 None:intergenic 30.0%
TTCAAAGAAGAACTTGTAGA+TGG + Chr1:83350918-83350937 MsG0180004833.01.T01:CDS 30.0%
! AATTAGATGGTGATTTTCGA+TGG + Chr1:83354147-83354166 MsG0180004833.01.T01:CDS 30.0%
! CAACCAACATTTTGAATTTC+AGG - Chr1:83348995-83349014 None:intergenic 30.0%
! CCTGTTATGAACTTTTATGT+TGG + Chr1:83352416-83352435 MsG0180004833.01.T01:intron 30.0%
! CTTTTCTTGTAATGAAGTGA+TGG + Chr1:83351277-83351296 MsG0180004833.01.T01:intron 30.0%
! GCCTATTACTTTGAAAGATA+TGG - Chr1:83353675-83353694 None:intergenic 30.0%
! TAGCTTCTTTAATTTCACAG+TGG - Chr1:83349468-83349487 None:intergenic 30.0%
! TGTTGGTTGAATTCTTTCAA+CGG + Chr1:83354483-83354502 MsG0180004833.01.T01:CDS 30.0%
! TTATCTCCTCATGGTTATTT+TGG + Chr1:83351781-83351800 MsG0180004833.01.T01:CDS 30.0%
!! ATATGGCATTTAGTTTGATC+AGG + Chr1:83350628-83350647 MsG0180004833.01.T01:intron 30.0%
!! ATCTTTACTGGCTTGTAAAT+TGG + Chr1:83352636-83352655 MsG0180004833.01.T01:CDS 30.0%
!! CTTTTCTGTTTTTCTGAGTA+GGG - Chr1:83353529-83353548 None:intergenic 30.0%
!! TATCTCCTCATGGTTATTTT+GGG + Chr1:83351782-83351801 MsG0180004833.01.T01:CDS 30.0%
!! TATGGCATTTAGTTTGATCA+GGG + Chr1:83350629-83350648 MsG0180004833.01.T01:intron 30.0%
!! TCTTTACTGGCTTGTAAATT+GGG + Chr1:83352637-83352656 MsG0180004833.01.T01:CDS 30.0%
!! TCTTTTCTGTTTTTCTGAGT+AGG - Chr1:83353530-83353549 None:intergenic 30.0%
!! TTTTCTGTTTTTCTGAGTAG+GGG - Chr1:83353528-83353547 None:intergenic 30.0%
!!! CAAATCTTTTGTATTGGTTG+CGG + Chr1:83351934-83351953 MsG0180004833.01.T01:intron 30.0%
!!! GCAGTTTTTTGCTAAAATCA+CGG + Chr1:83349362-83349381 MsG0180004833.01.T01:intron 30.0%
!!! TCAACTTTGACTTGGATTTT+CGG + Chr1:83352130-83352149 MsG0180004833.01.T01:intron 30.0%
!!! TGCGTTGATTTTTGTTGATA+TGG + Chr1:83353896-83353915 MsG0180004833.01.T01:intron 30.0%
!!! TTTTTTTACTGAATGATCCC+TGG + Chr1:83353258-83353277 MsG0180004833.01.T01:intron 30.0%
AAAGCCCATAATATTCTCCA+TGG + Chr1:83353947-83353966 MsG0180004833.01.T01:CDS 35.0%
ACTGATTAAAAATCGCGATG+GGG - Chr1:83349587-83349606 None:intergenic 35.0%
ACTTAATGATTTCACCGAAG+GGG - Chr1:83350390-83350409 None:intergenic 35.0%
AGAAAAGTCTCTAGTGTAGA+AGG - Chr1:83351727-83351746 None:intergenic 35.0%
AGGCCTAATTGAATGATTAG+AGG + Chr1:83353691-83353710 MsG0180004833.01.T01:intron 35.0%
AGGTTAATACCTGATGCAAA+GGG + Chr1:83352217-83352236 MsG0180004833.01.T01:intron 35.0%
AGTAAATGAAAACTAGCACC+AGG - Chr1:83353279-83353298 None:intergenic 35.0%
AGTACATACCAAGAAATTGC+AGG + Chr1:83352915-83352934 MsG0180004833.01.T01:CDS 35.0%
ATATATGCACATATCTGCTC+CGG - Chr1:83353503-83353522 None:intergenic 35.0%
ATCAGGATAACCTTGTAACT+CGG - Chr1:83352578-83352597 None:intergenic 35.0%
ATGCTGTGTTTCAACTTTGA+AGG + Chr1:83350263-83350282 MsG0180004833.01.T01:intron 35.0%
ATTATCGTCGTTCTTTCAGA+AGG + Chr1:83353371-83353390 MsG0180004833.01.T01:intron 35.0%
ATTCCTTTCTCTGATCTGAA+AGG - Chr1:83352307-83352326 None:intergenic 35.0%
CAAACAAATAGAGCACGTAA+TGG + Chr1:83354179-83354198 MsG0180004833.01.T01:CDS 35.0%
CAATAAATTCTCTGACCATG+TGG + Chr1:83350977-83350996 MsG0180004833.01.T01:intron 35.0%
CAGTGAACTGACATGAAAAA+TGG - Chr1:83352854-83352873 None:intergenic 35.0%
CATGGAGGATTTATTCTGAA+AGG + Chr1:83354646-83354665 MsG0180004833.01.T01:CDS 35.0%
CATTACGTGCTCTATTTGTT+TGG - Chr1:83354181-83354200 None:intergenic 35.0%
CCAAGTCAAAGTTGAAGAAA+TGG - Chr1:83352125-83352144 None:intergenic 35.0%
CCAATTCCCACTTATGATTA+TGG + Chr1:83351360-83351379 MsG0180004833.01.T01:intron 35.0%
CCATAATCATAAGTGGGAAT+TGG - Chr1:83351363-83351382 None:intergenic 35.0%
CCATTTCTTCAACTTTGACT+TGG + Chr1:83352122-83352141 MsG0180004833.01.T01:intron 35.0%
CGCTAAGTTTGATGAAATCA+TGG + Chr1:83349221-83349240 MsG0180004833.01.T01:intron 35.0%
CTTAGGAACAGAACAACATA+TGG + Chr1:83350611-83350630 MsG0180004833.01.T01:intron 35.0%
CTTGCAAAGCTTGATATCTT+AGG + Chr1:83350594-83350613 MsG0180004833.01.T01:intron 35.0%
CTTGCCATGGAGAATATTAT+GGG - Chr1:83353954-83353973 None:intergenic 35.0%
GAAACACAGCATCAACATTT+AGG - Chr1:83350255-83350274 None:intergenic 35.0%
GAATCTTGTTGCATCTTTAC+TGG + Chr1:83352624-83352643 MsG0180004833.01.T01:CDS 35.0%
GAATTTGGTTAGTGTACTTC+GGG + Chr1:83353643-83353662 MsG0180004833.01.T01:intron 35.0%
GACTTAATGATTTCACCGAA+GGG - Chr1:83350391-83350410 None:intergenic 35.0%
GATAAAATCAGCGCTATTCA+TGG - Chr1:83352889-83352908 None:intergenic 35.0%
GGTTATCCTGATTTCATCAT+TGG + Chr1:83352586-83352605 MsG0180004833.01.T01:CDS 35.0%
GTAAATGAAAACTAGCACCA+GGG - Chr1:83353278-83353297 None:intergenic 35.0%
GTTGAAAGAATTCAACCAAC+AGG - Chr1:83354484-83354503 None:intergenic 35.0%
TAACTCAGAATAGGGTGTAT+CGG - Chr1:83351479-83351498 None:intergenic 35.0%
TAAGTTCGAAAACATGCACA+CGG - Chr1:83350863-83350882 None:intergenic 35.0%
TCACCAAATCACGGTATTTA+AGG - Chr1:83354764-83354783 None:intergenic 35.0%
TCATATGTGAAGTTGTGACA+AGG + Chr1:83353844-83353863 MsG0180004833.01.T01:intron 35.0%
TCATTGGAAATTATAGCGAC+GGG + Chr1:83352602-83352621 MsG0180004833.01.T01:CDS 35.0%
TCCGAAACATAATTGAAGAG+AGG - Chr1:83351172-83351191 None:intergenic 35.0%
TGAATATTGTTCGTTGTCCT+TGG + Chr1:83351892-83351911 MsG0180004833.01.T01:intron 35.0%
TGACATCAGCTATAGTTTCA+AGG + Chr1:83351307-83351326 MsG0180004833.01.T01:intron 35.0%
TGCAATTTCTTGGTATGTAC+TGG - Chr1:83352916-83352935 None:intergenic 35.0%
TGCTATTGTCTTCTCTAGAT+CGG + Chr1:83349646-83349665 MsG0180004833.01.T01:intron 35.0%
TGGAAAGTTGGATTTCCATT+GGG - Chr1:83349522-83349541 None:intergenic 35.0%
TTATCTTATAGGATGCCACA+TGG - Chr1:83353144-83353163 None:intergenic 35.0%
TTCCAAACTTCAGTCTTCTT+TGG + Chr1:83351420-83351439 MsG0180004833.01.T01:CDS 35.0%
TTCTTCGTAAATGGATCTCA+AGG + Chr1:83352326-83352345 MsG0180004833.01.T01:CDS 35.0%
TTGGAAAGTTGGATTTCCAT+TGG - Chr1:83349523-83349542 None:intergenic 35.0%
TTGTAAATTGGGAATCACAC+AGG + Chr1:83352648-83352667 MsG0180004833.01.T01:CDS 35.0%
TTGTCTGAGTGTAGATTACA+GGG + Chr1:83351613-83351632 MsG0180004833.01.T01:intron 35.0%
TTGTGACAAGGCAATAAACA+TGG + Chr1:83353856-83353875 MsG0180004833.01.T01:intron 35.0%
TTTGAACACACTGGTAAAGA+AGG - Chr1:83351918-83351937 None:intergenic 35.0%
TTTGTATTCTGTTAAGTGGG+AGG + Chr1:83350062-83350081 MsG0180004833.01.T01:intron 35.0%
TTTGTGATCTACTTCAATCC+AGG + Chr1:83354996-83355015 MsG0180004833.01.T01:intron 35.0%
TTTGTTGATATGGTTGCAAG+TGG + Chr1:83353906-83353925 MsG0180004833.01.T01:intron 35.0%
! ACACTGATTAAAAATCGCGA+TGG - Chr1:83349589-83349608 None:intergenic 35.0%
! ACTTTGAAGGTATGTAGATC+AGG + Chr1:83350276-83350295 MsG0180004833.01.T01:intron 35.0%
! CACTGATTAAAAATCGCGAT+GGG - Chr1:83349588-83349607 None:intergenic 35.0%
! CTACAAGTTCTTCTTTGAAG+TGG - Chr1:83350917-83350936 None:intergenic 35.0%
! CTACACTAGAGACTTTTCTT+GGG + Chr1:83351728-83351747 MsG0180004833.01.T01:CDS 35.0%
! CTACTGTCTCCTTACTATTT+TGG + Chr1:83354252-83354271 MsG0180004833.01.T01:intron 35.0%
! CTTTGAAGGTATGTAGATCA+GGG + Chr1:83350277-83350296 MsG0180004833.01.T01:intron 35.0%
! TCTACACTAGAGACTTTTCT+TGG + Chr1:83351727-83351746 MsG0180004833.01.T01:CDS 35.0%
! TTTGAAGGTATGTAGATCAG+GGG + Chr1:83350278-83350297 MsG0180004833.01.T01:intron 35.0%
!! ATGAAATCATGGTGGATTCT+GGG + Chr1:83349232-83349251 MsG0180004833.01.T01:intron 35.0%
!! TTTTTGTTGTGAAGGTTACC+AGG + Chr1:83352197-83352216 MsG0180004833.01.T01:intron 35.0%
!!! GTTTTTTGCTAAAATCACGG+TGG + Chr1:83349365-83349384 MsG0180004833.01.T01:intron 35.0%
!!! TACAAAAGGTGCTTTTGTTC+AGG + Chr1:83354226-83354245 MsG0180004833.01.T01:CDS 35.0%
AAAAGACTTACAGCTCTGCA+CGG + Chr1:83353544-83353563 MsG0180004833.01.T01:CDS 40.0%
AAACTGAACACCATTACCGA+TGG - Chr1:83351138-83351157 None:intergenic 40.0%
AAAGTTGGATTTCCATTGGG+AGG - Chr1:83349519-83349538 None:intergenic 40.0%
AACGCAGTTGACGAAGAAAA+AGG - Chr1:83348933-83348952 None:intergenic 40.0%
AACTCAGAATAGGGTGTATC+GGG - Chr1:83351478-83351497 None:intergenic 40.0%
AAGACCAAAAGCTTCGTAGA+AGG - Chr1:83354333-83354352 None:intergenic 40.0%
ACATTGATGTAAGCAAGTCC+AGG + Chr1:83354069-83354088 MsG0180004833.01.T01:CDS 40.0%
ACCATAGATTTCTACCAACC+CGG - Chr1:83354000-83354019 None:intergenic 40.0%
ACCGAGTGAAAAACATTACC+GGG + Chr1:83353979-83353998 MsG0180004833.01.T01:CDS 40.0%
AGCGCATATGAATGTGAGAA+AGG - Chr1:83349444-83349463 None:intergenic 40.0%
AGTATGTCTCCAAACTAGAG+AGG + Chr1:83354703-83354722 MsG0180004833.01.T01:CDS 40.0%
AGTGAAAAACATTACCGGGT+TGG + Chr1:83353983-83354002 MsG0180004833.01.T01:CDS 40.0%
ATAAAACCAACCTGGAGAGA+AGG - Chr1:83348908-83348927 None:intergenic 40.0%
ATGTATTCATCAGTCTGCTC+GGG - Chr1:83353595-83353614 None:intergenic 40.0%
ATTATCCAGCACGGTAAATC+AGG + Chr1:83354419-83354438 MsG0180004833.01.T01:CDS 40.0%
ATTTCCATGGCAAAGCAAGA+GGG - Chr1:83352693-83352712 None:intergenic 40.0%
CAACATTATAAGAGGGTCCA+TGG - Chr1:83350430-83350449 None:intergenic 40.0%
CAAGTGGTACACTGAAAGAT+CGG + Chr1:83353922-83353941 MsG0180004833.01.T01:intron 40.0%
CAATATTCAGGTACACATGG+AGG + Chr1:83354631-83354650 MsG0180004833.01.T01:intron 40.0%
CAGGTTAATACCTGATGCAA+AGG + Chr1:83352216-83352235 MsG0180004833.01.T01:intron 40.0%
CATGGACCCTCTTATAATGT+TGG + Chr1:83350428-83350447 MsG0180004833.01.T01:intron 40.0%
CATGTATTCATCAGTCTGCT+CGG - Chr1:83353596-83353615 None:intergenic 40.0%
CATTGATGTAAGCAAGTCCA+GGG + Chr1:83354070-83354089 MsG0180004833.01.T01:CDS 40.0%
CCACTTATGATTATGGTGCA+GGG + Chr1:83351367-83351386 MsG0180004833.01.T01:intron 40.0%
CCATAATATTCTCCATGGCA+AGG + Chr1:83353952-83353971 MsG0180004833.01.T01:CDS 40.0%
CCTGCACCATAATCATAAGT+GGG - Chr1:83351369-83351388 None:intergenic 40.0%
CCTTGCCATGGAGAATATTA+TGG - Chr1:83353955-83353974 None:intergenic 40.0%
CGCTACATAGCAGATACAAA+AGG + Chr1:83354212-83354231 MsG0180004833.01.T01:CDS 40.0%
CGTGTGTTTGTGGATCTTTA+AGG + Chr1:83350177-83350196 MsG0180004833.01.T01:intron 40.0%
CTCCGAGCTCACAAATATAA+AGG + Chr1:83351224-83351243 MsG0180004833.01.T01:CDS 40.0%
CTCCTTAGGATCAAGAAACA+AGG + Chr1:83352050-83352069 MsG0180004833.01.T01:CDS 40.0%
CTTACGTTCCTGCAATTTCT+TGG - Chr1:83352926-83352945 None:intergenic 40.0%
CTTGTCTGAGTGTAGATTAC+AGG + Chr1:83351612-83351631 MsG0180004833.01.T01:intron 40.0%
CTTTATATTTGTGAGCTCGG+AGG - Chr1:83351226-83351245 None:intergenic 40.0%
CTTTGCATCAGGTATTAACC+TGG - Chr1:83352218-83352237 None:intergenic 40.0%
GAAAACTCTCCATATCCATG+TGG + Chr1:83353126-83353145 MsG0180004833.01.T01:intron 40.0%
GAACAGCAAACTAAGAGAAC+TGG + Chr1:83354022-83354041 MsG0180004833.01.T01:CDS 40.0%
GACCGAGTGAAAAACATTAC+CGG + Chr1:83353978-83353997 MsG0180004833.01.T01:CDS 40.0%
GAGTGTAGATTACAGGGAAT+GGG + Chr1:83351619-83351638 MsG0180004833.01.T01:intron 40.0%
GCAGGATCACCAAAATAGTA+AGG - Chr1:83354264-83354283 None:intergenic 40.0%
GGACTTAATGATTTCACCGA+AGG - Chr1:83350392-83350411 None:intergenic 40.0%
GGCCTTTATATTTGTGAGCT+CGG - Chr1:83351229-83351248 None:intergenic 40.0%
GGTTAATACCTGATGCAAAG+GGG + Chr1:83352218-83352237 MsG0180004833.01.T01:intron 40.0%
GGTTGTATACATACTGGATC+AGG + Chr1:83352004-83352023 MsG0180004833.01.T01:intron 40.0%
GTTCCTTTCAGATCAGAGAA+AGG + Chr1:83352301-83352320 MsG0180004833.01.T01:CDS 40.0%
GTTTCAAGGAATGCAACTTG+AGG + Chr1:83351321-83351340 MsG0180004833.01.T01:intron 40.0%
TAAAACCAACCTGGAGAGAA+GGG - Chr1:83348907-83348926 None:intergenic 40.0%
TAAATCCTGATTTACCGTGC+TGG - Chr1:83354427-83354446 None:intergenic 40.0%
TATAGGATGCCACATGGATA+TGG - Chr1:83353138-83353157 None:intergenic 40.0%
TATATGCACATATCTGCTCC+GGG - Chr1:83353502-83353521 None:intergenic 40.0%
TCTGCAGGTTGTATACATAC+TGG + Chr1:83351998-83352017 MsG0180004833.01.T01:intron 40.0%
TCTTCTCTAGATCGGATACT+CGG + Chr1:83349654-83349673 MsG0180004833.01.T01:intron 40.0%
TCTTTCAGAAGGAATACCGT+TGG + Chr1:83353382-83353401 MsG0180004833.01.T01:intron 40.0%
TGAAATCATTAAGTCCGCAC+AGG + Chr1:83350396-83350415 MsG0180004833.01.T01:CDS 40.0%
TGAATTCTTTCAACGGTGCA+AGG + Chr1:83354490-83354509 MsG0180004833.01.T01:CDS 40.0%
TGAGAAAGGAATACCAAACG+TGG - Chr1:83349430-83349449 None:intergenic 40.0%
TGAGTGTAGATTACAGGGAA+TGG + Chr1:83351618-83351637 MsG0180004833.01.T01:intron 40.0%
TGATAAAGCTTCTGACCTGT+TGG + Chr1:83354466-83354485 MsG0180004833.01.T01:CDS 40.0%
TGTGACATGATTCTTGTGAC+AGG + Chr1:83350770-83350789 MsG0180004833.01.T01:intron 40.0%
TGTGCGAAAGTCTCAAGAAA+AGG - Chr1:83352364-83352383 None:intergenic 40.0%
! AACAGGTCAGAAGCTTTATC+AGG - Chr1:83354467-83354486 None:intergenic 40.0%
! ACAGGTCAGAAGCTTTATCA+GGG - Chr1:83354466-83354485 None:intergenic 40.0%
! ACCCGGTAATGTTTTTCACT+CGG - Chr1:83353983-83354002 None:intergenic 40.0%
! CACAAAAGGAGGCATAACTA+TGG - Chr1:83350799-83350818 None:intergenic 40.0%
! CATAGTTATGCCTCCTTTTG+TGG + Chr1:83350797-83350816 MsG0180004833.01.T01:CDS 40.0%
! CGAGGAAATGAGGCATTAAA+TGG - Chr1:83351098-83351117 None:intergenic 40.0%
! GAAGCTTTATCAGGGTGATA+AGG - Chr1:83354458-83354477 None:intergenic 40.0%
! GATTACATGCTTGTTGGGAT+TGG - Chr1:83349558-83349577 None:intergenic 40.0%
! GCATGTTTTCGAACTTACTG+TGG + Chr1:83350866-83350885 MsG0180004833.01.T01:CDS 40.0%
! GTCCTTGTTTCTTGATCCTA+AGG - Chr1:83352055-83352074 None:intergenic 40.0%
! TCGGCAATTTTGCTTGATAG+TGG + Chr1:83349673-83349692 MsG0180004833.01.T01:intron 40.0%
! TTTTCTTGAGACTTTCGCAC+AGG + Chr1:83352363-83352382 MsG0180004833.01.T01:CDS 40.0%
!! CTTGATAGTGGCAATGTTTG+GGG + Chr1:83349685-83349704 MsG0180004833.01.T01:intron 40.0%
!! GATGAAATCATGGTGGATTC+TGG + Chr1:83349231-83349250 MsG0180004833.01.T01:intron 40.0%
!! GCTTGATAGTGGCAATGTTT+GGG + Chr1:83349684-83349703 MsG0180004833.01.T01:intron 40.0%
!! TGCGAGATATTTTTGTCTGC+AGG + Chr1:83351983-83352002 MsG0180004833.01.T01:intron 40.0%
!! TGCTTGATAGTGGCAATGTT+TGG + Chr1:83349683-83349702 MsG0180004833.01.T01:intron 40.0%
!! TTCATGGCTGTTTTCATGAC+TGG + Chr1:83351012-83351031 MsG0180004833.01.T01:intron 40.0%
!!! AATGGGTTTTGAGAGAGGTT+GGG + Chr1:83351636-83351655 MsG0180004833.01.T01:CDS 40.0%
!!! AGCTTTTGGTCTTACAGTTG+TGG + Chr1:83354340-83354359 MsG0180004833.01.T01:CDS 40.0%
!!! TTTTGGTCTTACAGTTGTGG+AGG + Chr1:83354343-83354362 MsG0180004833.01.T01:CDS 40.0%
AACAAGTTCGTTGCGATGAG+CGG - Chr1:83348883-83348902 None:intergenic 45.0%
AACGCGTGTGTTTGGAAAGT+TGG - Chr1:83349534-83349553 None:intergenic 45.0%
AACTTGCATACTTGGCCAGT+TGG + Chr1:83350701-83350720 MsG0180004833.01.T01:intron 45.0%
AATATTCTCCATGGCAAGGC+TGG + Chr1:83353956-83353975 MsG0180004833.01.T01:CDS 45.0%
ACATTTGCAACTTGCCATGG+TGG + Chr1:83354386-83354405 MsG0180004833.01.T01:CDS 45.0%
ACTGCTATTGCCACAAAAGG+AGG - Chr1:83350810-83350829 None:intergenic 45.0%
ACTTCAGTCTTCTTTGGCCA+AGG + Chr1:83351426-83351445 MsG0180004833.01.T01:CDS 45.0%
AGAAAGATGATCCTCAGCCT+TGG - Chr1:83351446-83351465 None:intergenic 45.0%
AGAACTGGTCAACCTTGTTG+TGG + Chr1:83354037-83354056 MsG0180004833.01.T01:CDS 45.0%
AGGCTGAGGATCATCTTTCT+AGG + Chr1:83351446-83351465 MsG0180004833.01.T01:CDS 45.0%
AGGTATGTAGATCAGGGGAA+AGG + Chr1:83350283-83350302 MsG0180004833.01.T01:intron 45.0%
AGTATCAGAGACAGAGTGGA+GGG + Chr1:83348849-83348868 MsG0180004833.01.T01:CDS 45.0%
AGTTTCACGCCTCTCTAGTT+TGG - Chr1:83354715-83354734 None:intergenic 45.0%
ATGGCAAAGCAAGAGGGAAA+TGG - Chr1:83352687-83352706 None:intergenic 45.0%
ATTCTTTCAACGGTGCAAGG+AGG + Chr1:83354493-83354512 MsG0180004833.01.T01:CDS 45.0%
ATTTCCCTCTTGCTTTGCCA+TGG + Chr1:83352686-83352705 MsG0180004833.01.T01:intron 45.0%
CAGCGACTAGAAAAAGTCTG+TGG + Chr1:83352253-83352272 MsG0180004833.01.T01:CDS 45.0%
CATTTCCATGGCAAAGCAAG+AGG - Chr1:83352694-83352713 None:intergenic 45.0%
CCATGGCAAGTTGCAAATGT+CGG - Chr1:83354386-83354405 None:intergenic 45.0%
CCCACTTATGATTATGGTGC+AGG + Chr1:83351366-83351385 MsG0180004833.01.T01:intron 45.0%
CCCTGCACCATAATCATAAG+TGG - Chr1:83351370-83351389 None:intergenic 45.0%
CGAACTGCTATTGCCACAAA+AGG - Chr1:83350813-83350832 None:intergenic 45.0%
CGGACATATTCCCAAATACC+AGG - Chr1:83350843-83350862 None:intergenic 45.0%
CTGGGAAGTCTAACAAGCTT+AGG - Chr1:83348831-83348850 None:intergenic 45.0%
GAAACTATAAACTCCCGCCA+AGG - Chr1:83354679-83354698 None:intergenic 45.0%
GAAATTGCTGCCGAGTTACA+AGG + Chr1:83352565-83352584 MsG0180004833.01.T01:CDS 45.0%
GAAGCTACTCTTACTCCACA+TGG - Chr1:83350995-83351014 None:intergenic 45.0%
GATCTCAAAAATGGCCCCTT+CGG + Chr1:83350373-83350392 MsG0180004833.01.T01:CDS 45.0%
GCTCGGAGGAAATTAAGCAA+AGG - Chr1:83351212-83351231 None:intergenic 45.0%
GCTTGCCCAAAATAACCATG+AGG - Chr1:83351790-83351809 None:intergenic 45.0%
GGAAGTCTAACAAGCTTAGG+AGG - Chr1:83348828-83348847 None:intergenic 45.0%
GGATCTCAAGGTTTGATGTG+TGG + Chr1:83352338-83352357 MsG0180004833.01.T01:CDS 45.0%
GGCCAAAGAAGACTGAAGTT+TGG - Chr1:83351425-83351444 None:intergenic 45.0%
GGGAGGTAGAGATGAGAAAT+AGG + Chr1:83350079-83350098 MsG0180004833.01.T01:intron 45.0%
GGTATGTAGATCAGGGGAAA+GGG + Chr1:83350284-83350303 MsG0180004833.01.T01:intron 45.0%
GTCTCTAGTGTAGAAGGATC+AGG - Chr1:83351721-83351740 None:intergenic 45.0%
GTGGAGTAAGAGTAGCTTCA+TGG + Chr1:83350996-83351015 MsG0180004833.01.T01:intron 45.0%
TACTCTTCCTGGGCTCTATA+GGG + Chr1:83353429-83353448 MsG0180004833.01.T01:CDS 45.0%
TATTCCCAAATACCAGGTCG+TGG - Chr1:83350837-83350856 None:intergenic 45.0%
TCCACTCTGTCTCTGATACT+GGG - Chr1:83348849-83348868 None:intergenic 45.0%
TGGCGGGAGTTTATAGTTTC+TGG + Chr1:83354679-83354698 MsG0180004833.01.T01:CDS 45.0%
TGTAACCAGCTACCACAACA+AGG - Chr1:83354052-83354071 None:intergenic 45.0%
TGTATTCATCAGTCTGCTCG+GGG - Chr1:83353594-83353613 None:intergenic 45.0%
TTACTCTTCCTGGGCTCTAT+AGG + Chr1:83353428-83353447 MsG0180004833.01.T01:CDS 45.0%
TTGAGAACGAGATGCTCCTT+AGG + Chr1:83352036-83352055 MsG0180004833.01.T01:CDS 45.0%
TTGGTTAGTGTACTTCGGGA+AGG + Chr1:83353647-83353666 MsG0180004833.01.T01:intron 45.0%
! AACTAGAGAGGCGTGAAACT+CGG + Chr1:83354715-83354734 MsG0180004833.01.T01:CDS 45.0%
! AACTTGTTTCCCTTCTCTCC+AGG + Chr1:83348895-83348914 MsG0180004833.01.T01:CDS 45.0%
! AGATGAAGTGCTAGTCCAAC+TGG - Chr1:83350719-83350738 None:intergenic 45.0%
! ATGGAGAGTTTTCCACTGGT+AGG - Chr1:83353119-83353138 None:intergenic 45.0%
! GGATATGGAGAGTTTTCCAC+TGG - Chr1:83353123-83353142 None:intergenic 45.0%
! GTTTCAAAAGCGCAGAGATG+TGG - Chr1:83349852-83349871 None:intergenic 45.0%
! TAACATGGAAGCGTGCTGTT+TGG - Chr1:83353078-83353097 None:intergenic 45.0%
! TTCGACAATTTGGTGGCTCT+TGG + Chr1:83350457-83350476 MsG0180004833.01.T01:intron 45.0%
! TTCTGAAAGGCTCATGACCT+TGG + Chr1:83354659-83354678 MsG0180004833.01.T01:CDS 45.0%
!! AAGGAGCATCTCGTTCTCAA+GGG - Chr1:83352036-83352055 None:intergenic 45.0%
!! ACCGGGTTGGTAGAAATCTA+TGG + Chr1:83353996-83354015 MsG0180004833.01.T01:CDS 45.0%
!! AGCTATTTCTTCTCTGTCCC+TGG - Chr1:83354090-83354109 None:intergenic 45.0%
!! CACAGACTTTTTCTAGTCGC+TGG - Chr1:83352255-83352274 None:intergenic 45.0%
!! CGGTAGTTTTACGTGTCAAC+AGG + Chr1:83352531-83352550 MsG0180004833.01.T01:intron 45.0%
!! GATGAGTTGGAAAGCATCCA+TGG + Chr1:83350331-83350350 MsG0180004833.01.T01:CDS 45.0%
!! TAAGGAGCATCTCGTTCTCA+AGG - Chr1:83352037-83352056 None:intergenic 45.0%
!!! ACGCTGCTTTTACTCTTCCT+GGG + Chr1:83353419-83353438 MsG0180004833.01.T01:CDS 45.0%
!!! ATGGGTTTTGAGAGAGGTTG+GGG + Chr1:83351637-83351656 MsG0180004833.01.T01:CDS 45.0%
!!! GAATGGGTTTTGAGAGAGGT+TGG + Chr1:83351635-83351654 MsG0180004833.01.T01:CDS 45.0%
!!! TTTTCTTGGGAGAGTGCCAA+TGG + Chr1:83351741-83351760 MsG0180004833.01.T01:CDS 45.0%
!!! AAAATTGTTTTTTTTTTATA+AGG + Chr1:83354589-83354608 MsG0180004833.01.T01:intron 5.0%
!!! ATAAATATATTTTACTTTTA+AGG + Chr1:83350525-83350544 MsG0180004833.01.T01:intron 5.0%
!!! ATAATTTTGAATTTAAATAT+CGG + Chr1:83352511-83352530 MsG0180004833.01.T01:intron 5.0%
!!! ATATAATATTTTTTTTAACT+CGG + Chr1:83354787-83354806 MsG0180004833.01.T01:intron 5.0%
AAACTGCAGACGACTCTGCA+AGG - Chr1:83351553-83351572 None:intergenic 50.0%
AAGCAGCGTGACTCTCATAC+TGG - Chr1:83353408-83353427 None:intergenic 50.0%
AAGGATCAGGAGCCTGAAGA+AGG - Chr1:83351708-83351727 None:intergenic 50.0%
ACTGCGTTTGGATCCACGTT+TGG + Chr1:83349414-83349433 MsG0180004833.01.T01:intron 50.0%
AGAGACGATGCATCTGCTCT+TGG + Chr1:83351681-83351700 MsG0180004833.01.T01:CDS 50.0%
ATTACCGATGGACGATGAGC+GGG - Chr1:83351126-83351145 None:intergenic 50.0%
CACACTGGTAAAGAAGGCCA+AGG - Chr1:83351912-83351931 None:intergenic 50.0%
CAGTATCAGAGACAGAGTGG+AGG + Chr1:83348848-83348867 MsG0180004833.01.T01:CDS 50.0%
CATGTTGTCCCCTTTGCATC+AGG - Chr1:83352229-83352248 None:intergenic 50.0%
CATTACCGATGGACGATGAG+CGG - Chr1:83351127-83351146 None:intergenic 50.0%
CCAAAAGCTTCGTAGAAGGC+AGG - Chr1:83354329-83354348 None:intergenic 50.0%
CCAGCTGAGATTATCCAGCA+CGG + Chr1:83354410-83354429 MsG0180004833.01.T01:CDS 50.0%
CCATGGTAAGTTCACCTGTG+CGG - Chr1:83350413-83350432 None:intergenic 50.0%
CCGACATTTGCAACTTGCCA+TGG + Chr1:83354383-83354402 MsG0180004833.01.T01:CDS 50.0%
CGTGCTGGATAATCTCAGCT+GGG - Chr1:83354412-83354431 None:intergenic 50.0%
CTCCACTCTGTCTCTGATAC+TGG - Chr1:83348850-83348869 None:intergenic 50.0%
GCAAGGAGGATCCAAGTCAT+TGG + Chr1:83354507-83354526 MsG0180004833.01.T01:CDS 50.0%
GCCACCGAGGATCTCAAAAA+TGG + Chr1:83350364-83350383 MsG0180004833.01.T01:CDS 50.0%
GCTAGCACAGCGAACTTACA+TGG - Chr1:83351250-83351269 None:intergenic 50.0%
GGCAAGTTGCAAATGTCGGA+AGG - Chr1:83354382-83354401 None:intergenic 50.0%
GGGCTCTATAGGGTTGTTCA+CGG + Chr1:83353439-83353458 MsG0180004833.01.T01:CDS 50.0%
GTGACTCTCATACTGGCCAA+CGG - Chr1:83353401-83353420 None:intergenic 50.0%
GTGCACAATTGCTCATGCAC+TGG + Chr1:83352773-83352792 MsG0180004833.01.T01:intron 50.0%
TCCAAACACAGCACTGCGTT+TGG + Chr1:83349402-83349421 MsG0180004833.01.T01:intron 50.0%
TCCAAACGCAGTGCTGTGTT+TGG - Chr1:83349406-83349425 None:intergenic 50.0%
TCCCAGTATCAGAGACAGAG+TGG + Chr1:83348845-83348864 MsG0180004833.01.T01:CDS 50.0%
TCGTCCACGACCTGGTATTT+GGG + Chr1:83350830-83350849 MsG0180004833.01.T01:CDS 50.0%
TCTGCTCTTGGACCTTCTTC+AGG + Chr1:83351693-83351712 MsG0180004833.01.T01:CDS 50.0%
TGAAAGGCTCATGACCTTGG+CGG + Chr1:83354662-83354681 MsG0180004833.01.T01:CDS 50.0%
TGAACAACCCTATAGAGCCC+AGG - Chr1:83353439-83353458 None:intergenic 50.0%
TGTTTCCCTTCTCTCCAGGT+TGG + Chr1:83348899-83348918 MsG0180004833.01.T01:intron 50.0%
TTCGTCCACGACCTGGTATT+TGG + Chr1:83350829-83350848 MsG0180004833.01.T01:CDS 50.0%
TTCGTTGCGATGAGCGGAAA+GGG - Chr1:83348877-83348896 None:intergenic 50.0%
TTTGCATCATCCTCTGCCAG+TGG - Chr1:83355033-83355052 None:intergenic 50.0%
TTTGGGCAAGCCAATGTCCT+GGG + Chr1:83351799-83351818 MsG0180004833.01.T01:CDS 50.0%
! ACATGATTGGCTCCTACCAG+TGG + Chr1:83353104-83353123 MsG0180004833.01.T01:intron 50.0%
! CCTGCCTTCTACGAAGCTTT+TGG + Chr1:83354326-83354345 MsG0180004833.01.T01:CDS 50.0%
! GTCAACCTTGTTGTGGTAGC+TGG + Chr1:83354044-83354063 MsG0180004833.01.T01:CDS 50.0%
! TTTTGGGCAAGCCAATGTCC+TGG + Chr1:83351798-83351817 MsG0180004833.01.T01:CDS 50.0%
!! CATCGTCTCTAGAACCCGTT+CGG - Chr1:83351671-83351690 None:intergenic 50.0%
!! GGATTGGTAACGCGTGTGTT+TGG - Chr1:83349542-83349561 None:intergenic 50.0%
!! TTGGAAAGCATCCATGGCGA+GGG + Chr1:83350337-83350356 MsG0180004833.01.T01:CDS 50.0%
!!! CACGCTGCTTTTACTCTTCC+TGG + Chr1:83353418-83353437 MsG0180004833.01.T01:CDS 50.0%
!!! CAGGGAATGGGTTTTGAGAG+AGG + Chr1:83351631-83351650 MsG0180004833.01.T01:CDS 50.0%
!!! GCCATTTTTGAGATCCTCGG+TGG - Chr1:83350368-83350387 None:intergenic 50.0%
!!! GGGGCCATTTTTGAGATCCT+CGG - Chr1:83350371-83350390 None:intergenic 50.0%
AATACCTGCCCACCAGTGTC+AGG - Chr1:83351829-83351848 None:intergenic 55.0%
ATAGCAGTTCGTCCACGACC+TGG + Chr1:83350822-83350841 MsG0180004833.01.T01:CDS 55.0%
CAAGTCTGTTCCACTGGCAG+AGG + Chr1:83355020-83355039 MsG0180004833.01.T01:CDS 55.0%
CCGCACAGGTGAACTTACCA+TGG + Chr1:83350410-83350429 MsG0180004833.01.T01:intron 55.0%
CCGTGCTGGATAATCTCAGC+TGG - Chr1:83354413-83354432 None:intergenic 55.0%
CGCTCATCGTCCATCGGTAA+TGG + Chr1:83351125-83351144 MsG0180004833.01.T01:CDS 55.0%
CGTGTGTGTGCGTGTGTTTG+TGG + Chr1:83350167-83350186 MsG0180004833.01.T01:intron 55.0%
CTCTGCCAGTGGAACAGACT+TGG - Chr1:83355022-83355041 None:intergenic 55.0%
GAAAGGCTCATGACCTTGGC+GGG + Chr1:83354663-83354682 MsG0180004833.01.T01:CDS 55.0%
GTCAGGCAAACCCAGGACAT+TGG - Chr1:83351812-83351831 None:intergenic 55.0%
GTCTTCTTTGGCCAAGGCTG+AGG + Chr1:83351432-83351451 MsG0180004833.01.T01:CDS 55.0%
GTTCGTTGCGATGAGCGGAA+AGG - Chr1:83348878-83348897 None:intergenic 55.0%
GTTGGGGTGATACTGCCGAA+CGG + Chr1:83351653-83351672 MsG0180004833.01.T01:CDS 55.0%
GTTGTGGAGGCCATGACTTG+TGG + Chr1:83354356-83354375 MsG0180004833.01.T01:CDS 55.0%
TAATCTCAGCTGGGCCACCA+TGG - Chr1:83354403-83354422 None:intergenic 55.0%
TGCAGACGACTCTGCAAGGA+GGG - Chr1:83351549-83351568 None:intergenic 55.0%
TGGGTTTGCCTGACACTGGT+GGG + Chr1:83351818-83351837 MsG0180004833.01.T01:CDS 55.0%
TGTCGGAAGGCCACAAGTCA+TGG - Chr1:83354369-83354388 None:intergenic 55.0%
TTGAACGCTCGTCCTCCCAA+TGG + Chr1:83349504-83349523 MsG0180004833.01.T01:intron 55.0%
TTGGGGTGATACTGCCGAAC+GGG + Chr1:83351654-83351673 MsG0180004833.01.T01:CDS 55.0%
! TCAAACTTAGCGGGCGTTCG+TGG - Chr1:83349213-83349232 None:intergenic 55.0%
!! GTTGGAAAGCATCCATGGCG+AGG + Chr1:83350336-83350355 MsG0180004833.01.T01:CDS 55.0%
AAGCATCCATGGCGAGGGTC+AGG + Chr1:83350342-83350361 MsG0180004833.01.T01:CDS 60.0%
CACCAGTGTCAGGCAAACCC+AGG - Chr1:83351819-83351838 None:intergenic 60.0%
CCAACCCGCTCATCGTCCAT+CGG + Chr1:83351119-83351138 MsG0180004833.01.T01:CDS 60.0%
CCAGGCCAAGTCTGTTCCAC+TGG + Chr1:83355014-83355033 MsG0180004833.01.T01:intron 60.0%
CCAGTGGAACAGACTTGGCC+TGG - Chr1:83355017-83355036 None:intergenic 60.0%
CTGCAGACGACTCTGCAAGG+AGG - Chr1:83351550-83351569 None:intergenic 60.0%
CTGGGTTTGCCTGACACTGG+TGG + Chr1:83351817-83351836 MsG0180004833.01.T01:CDS 60.0%
GCAGACGACTCTGCAAGGAG+GGG - Chr1:83351548-83351567 None:intergenic 60.0%
GTAGAAGGCAGGCTGCAGCA+AGG - Chr1:83354318-83354337 None:intergenic 60.0%
GTCCTGGGTTTGCCTGACAC+TGG + Chr1:83351814-83351833 MsG0180004833.01.T01:CDS 60.0%
! TTTGCCTGACACTGGTGGGC+AGG + Chr1:83351822-83351841 MsG0180004833.01.T01:CDS 60.0%
!! GCGGGTTGGTCGAGGAAATG+AGG - Chr1:83351108-83351127 None:intergenic 60.0%
CACTCGGTCCAGCCTTGCCA+TGG - Chr1:83353967-83353986 None:intergenic 65.0%
CCGATGGACGATGAGCGGGT+TGG - Chr1:83351122-83351141 None:intergenic 65.0%
!! GACGATGAGCGGGTTGGTCG+AGG - Chr1:83351116-83351135 None:intergenic 65.0%
CGGTGGCCTGACCCTCGCCA+TGG - Chr1:83350351-83350370 None:intergenic 75.0%
TGGCGAGGGTCAGGCCACCG+AGG + Chr1:83350351-83350370 MsG0180004833.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 83348816 83355056 83348816 ID=MsG0180004833.01;Name=MsG0180004833.01
Chr1 mRNA 83348816 83355056 83348816 ID=MsG0180004833.01.T01;Parent=MsG0180004833.01;Name=MsG0180004833.01.T01;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|1|1|15|0|812
Chr1 exon 83348816 83348916 83348816 ID=MsG0180004833.01.T01:exon:8923;Parent=MsG0180004833.01.T01
Chr1 exon 83350285 83350417 83350285 ID=MsG0180004833.01.T01:exon:8924;Parent=MsG0180004833.01.T01
Chr1 exon 83350792 83350943 83350792 ID=MsG0180004833.01.T01:exon:8925;Parent=MsG0180004833.01.T01
Chr1 exon 83351058 83351250 83351058 ID=MsG0180004833.01.T01:exon:8926;Parent=MsG0180004833.01.T01
Chr1 exon 83351388 83351506 83351388 ID=MsG0180004833.01.T01:exon:8927;Parent=MsG0180004833.01.T01
Chr1 exon 83351627 83351843 83351627 ID=MsG0180004833.01.T01:exon:8928;Parent=MsG0180004833.01.T01
Chr1 exon 83352005 83352108 83352005 ID=MsG0180004833.01.T01:exon:8929;Parent=MsG0180004833.01.T01
Chr1 exon 83352219 83352384 83352219 ID=MsG0180004833.01.T01:exon:8930;Parent=MsG0180004833.01.T01
Chr1 exon 83352553 83352669 83352553 ID=MsG0180004833.01.T01:exon:8931;Parent=MsG0180004833.01.T01
Chr1 exon 83352774 83352940 83352774 ID=MsG0180004833.01.T01:exon:8932;Parent=MsG0180004833.01.T01
Chr1 exon 83353390 83353614 83353390 ID=MsG0180004833.01.T01:exon:8933;Parent=MsG0180004833.01.T01
Chr1 exon 83353926 83354247 83353926 ID=MsG0180004833.01.T01:exon:8934;Parent=MsG0180004833.01.T01
Chr1 exon 83354326 83354570 83354326 ID=MsG0180004833.01.T01:exon:8935;Parent=MsG0180004833.01.T01
Chr1 exon 83354641 83354779 83354641 ID=MsG0180004833.01.T01:exon:8936;Parent=MsG0180004833.01.T01
Chr1 exon 83355018 83355056 83355018 ID=MsG0180004833.01.T01:exon:8937;Parent=MsG0180004833.01.T01
Chr1 CDS 83348816 83348916 83348816 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83350285 83350417 83350285 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83350792 83350943 83350792 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83351058 83351250 83351058 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83351388 83351506 83351388 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83351627 83351843 83351627 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83352005 83352108 83352005 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83352219 83352384 83352219 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83352553 83352669 83352553 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83352774 83352940 83352774 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83353390 83353614 83353390 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83353926 83354247 83353926 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83354326 83354570 83354326 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83354641 83354779 83354641 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Chr1 CDS 83355018 83355056 83355018 ID=MsG0180004833.01.T01:cds;Parent=MsG0180004833.01.T01
Gene Sequence

>MsG0180004833.01.T01

ATGTCTCAACCTCCTAAGCTTGTTAGACTTCCCAGTATCAGAGACAGAGTGGAGGGTACCCTTTCCGCTCATCGCAACGAACTTGTTTCCCTTCTCTCCAGGTATGTAGATCAGGGGAAAGGGATTCTGCAACCTCATAATTTGATTGATGAGTTGGAAAGCATCCATGGCGAGGGTCAGGCCACCGAGGATCTCAAAAATGGCCCCTTCGGTGAAATCATTAAGTCCGCACAGGAAGCCATAGTTATGCCTCCTTTTGTGGCAATAGCAGTTCGTCCACGACCTGGTATTTGGGAATATGTCCGTGTGCATGTTTTCGAACTTACTGTGGAGCAATTAACTGTTTCTGAATATCTCCACTTCAAAGAAGAACTTGTAGATGGAACGAATAATGATCATTATGTATTAGAGCTTGATTTTGAGCCATTTAATGCCTCATTTCCTCGACCAACCCGCTCATCGTCCATCGGTAATGGTGTTCAGTTTCTCAATCGTCACCTCTCTTCAATTATGTTTCGGAAAAAAGATTCATTGGAGCCTTTGCTTAATTTCCTCCGAGCTCACAAATATAAAGGCCATGGACTGATGTTAAATGATCGTATACACAGCATTTCCAAACTTCAGTCTTCTTTGGCCAAGGCTGAGGATCATCTTTCTAGGCTTGCACCCGATACACCCTATTCTGAGTTAGAATATGTATTACAGGGAATGGGTTTTGAGAGAGGTTGGGGTGATACTGCCGAACGGGTTCTAGAGACGATGCATCTGCTCTTGGACCTTCTTCAGGCTCCTGATCCTTCTACACTAGAGACTTTTCTTGGGAGAGTGCCAATGGTGTTCAATGTTGTTATATTATCTCCTCATGGTTATTTTGGGCAAGCCAATGTCCTGGGTTTGCCTGACACTGGTGGGCAGGTTGTATACATACTGGATCAGGTGCGTGCCCTTGAGAACGAGATGCTCCTTAGGATCAAGAAACAAGGACTTGATCTCACACCTAGAATTCTAATTGTGAGTGTGTTAATACCTGATGCAAAGGGGACAACATGCAACCAGCGACTAGAAAAAGTCTGTGGTACCGAACATACTCATATTTTGCGAGTTCCTTTCAGATCAGAGAAAGGAATTCTTCGTAAATGGATCTCAAGGTTTGATGTGTGGCCTTTTCTTGAGACTTTCGCACAGGATGCTGCTAGTGAAATTGCTGCCGAGTTACAAGGTTATCCTGATTTCATCATTGGAAATTATAGCGACGGGAATCTTGTTGCATCTTTACTGGCTTGTAAATTGGGAATCACACAGTGCACAATTGCTCATGCACTGGAGAAAACAAAATATCCAGATTCAGGTACTTATTGGAGGAAGTTCGATGATAAATACCATTTTTCATGTCAGTTCACTGCTGATCTAATAGCCATGAATAGCGCTGATTTTATCATCACCAGTACATACCAAGAAATTGCAGGAACAAGGAATACCGTTGGCCAGTATGAGAGTCACGCTGCTTTTACTCTTCCTGGGCTCTATAGGGTTGTTCACGGCATTGATGTTTTTGATCCTAAGTTTAATATTGTCTCTCCCGGAGCAGATATGTGCATATATTTCCCCTACTCAGAAAAACAGAAAAGACTTACAGCTCTGCACGGTGCAATTGAAAAGTTATTATATGACCCCGAGCAGACTGATGAATACATTGGTACACTGAAAGATCGGTCAAAGCCCATAATATTCTCCATGGCAAGGCTGGACCGAGTGAAAAACATTACCGGGTTGGTAGAAATCTATGGTAAGAACAGCAAACTAAGAGAACTGGTCAACCTTGTTGTGGTAGCTGGTTACATTGATGTAAGCAAGTCCAGGGACAGAGAAGAAATAGCTGAAATTGAAAAGATGTATGATCTCATAAAAACATATAAATTAGATGGTGATTTTCGATGGATTGCTTCCCAAACAAATAGAGCACGTAATGGTGAGTTGTATCGCTACATAGCAGATACAAAAGGTGCTTTTGTTCAGCCTGCCTTCTACGAAGCTTTTGGTCTTACAGTTGTGGAGGCCATGACTTGTGGCCTTCCGACATTTGCAACTTGCCATGGTGGCCCAGCTGAGATTATCCAGCACGGTAAATCAGGATTTAATATTGATCCTTATCACCCTGATAAAGCTTCTGACCTGTTGGTTGAATTCTTTCAACGGTGCAAGGAGGATCCAAGTCATTGGAATAAAATTTCTGATGGTGGTCTTCAAAGAATTTATGAAAGGTACACATGGAGGATTTATTCTGAAAGGCTCATGACCTTGGCGGGAGTTTATAGTTTCTGGAAGTATGTCTCCAAACTAGAGAGGCGTGAAACTCGGCGATATCTTGAAATGTTCTATATCCTTAAATACCGTGATTTGGCCAAGTCTGTTCCACTGGCAGAGGATGATGCAAATTAA
Protein sequence

>MsG0180004833.01.T01

MSQPPKLVRLPSIRDRVEGTLSAHRNELVSLLSRYVDQGKGILQPHNLIDELESIHGEGQATEDLKNGPFGEIIKSAQEAIVMPPFVAIAVRPRPGIWEYVRVHVFELTVEQLTVSEYLHFKEELVDGTNNDHYVLELDFEPFNASFPRPTRSSSIGNGVQFLNRHLSSIMFRKKDSLEPLLNFLRAHKYKGHGLMLNDRIHSISKLQSSLAKAEDHLSRLAPDTPYSELEYVLQGMGFERGWGDTAERVLETMHLLLDLLQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDLTPRILIVSVLIPDAKGTTCNQRLEKVCGTEHTHILRVPFRSEKGILRKWISRFDVWPFLETFAQDAASEIAAELQGYPDFIIGNYSDGNLVASLLACKLGITQCTIAHALEKTKYPDSGTYWRKFDDKYHFSCQFTADLIAMNSADFIITSTYQEIAGTRNTVGQYESHAAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKQKRLTALHGAIEKLLYDPEQTDEYIGTLKDRSKPIIFSMARLDRVKNITGLVEIYGKNSKLRELVNLVVVAGYIDVSKSRDREEIAEIEKMYDLIKTYKLDGDFRWIASQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIQHGKSGFNIDPYHPDKASDLLVEFFQRCKEDPSHWNKISDGGLQRIYERYTWRIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKYRDLAKSVPLAEDDAN*