AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005117.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005117.01.T01 MTR_0002s0890 77.901 629 106 5 334 931 425 1051 0.0 945
MsG0180005117.01.T01 MTR_0002s0890 80.840 381 58 3 1 366 1 381 0.0 627
MsG0180005117.01.T01 MTR_1g094010 87.371 388 31 5 1 381 1 377 0.0 675
MsG0180005117.01.T01 MTR_1g094010 94.805 231 12 0 345 575 413 643 4.10e-132 411
MsG0180005117.01.T01 MTR_4g079860 39.979 943 431 16 71 931 77 966 0.0 647
MsG0180005117.01.T01 MTR_8g463920 40.106 940 435 17 71 931 77 967 0.0 642
MsG0180005117.01.T01 MTR_2g092930 39.535 946 431 15 71 931 77 966 0.0 638
MsG0180005117.01.T01 MTR_2g076670 39.703 942 436 16 71 931 76 966 0.0 630
MsG0180005117.01.T01 MTR_8g463920 41.756 843 394 16 71 865 77 870 0.0 608
MsG0180005117.01.T01 MTR_1g094000 87.719 342 13 3 619 931 1 342 0.0 571
MsG0180005117.01.T01 MTR_1g009850 37.634 465 190 10 472 931 1 370 2.00e-77 257
MsG0180005117.01.T01 MTR_7g060030 51.323 189 52 5 149 329 29 185 2.05e-46 165
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005117.01.T01 AT1G68750 74.632 611 120 2 353 931 425 1032 0.0 904
MsG0180005117.01.T01 AT1G68750 76.751 357 77 2 1 353 1 355 0.0 565
MsG0180005117.01.T01 AT1G53310 40.042 944 430 16 71 931 77 967 0.0 645
MsG0180005117.01.T01 AT1G53310 40.042 944 430 16 71 931 77 967 0.0 645
MsG0180005117.01.T01 AT1G53310 40.042 944 430 16 71 931 77 967 0.0 645
MsG0180005117.01.T01 AT3G14940 40.275 946 426 16 71 931 77 968 0.0 640
MsG0180005117.01.T01 AT3G14940 40.275 946 426 16 71 931 77 968 0.0 640
MsG0180005117.01.T01 AT2G42600 39.831 944 428 16 71 931 77 963 0.0 635
MsG0180005117.01.T01 AT2G42600 39.831 944 428 16 71 931 77 963 0.0 635
MsG0180005117.01.T01 AT2G42600 39.831 944 428 16 71 931 77 963 0.0 635

Find 248 sgRNAs with CRISPR-Local

Find 550 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAGCATCTCTGAGTTTA+AGG 0.106305 1:-87263365 None:intergenic
CATCCAAGTTCCAAACTTTA+TGG 0.132919 1:-87257329 None:intergenic
GCTTTGCTTATCACCGTAAA+TGG 0.145481 1:+87263381 MsG0180005117.01.T01:CDS
TGATGCAGTTACAACATATT+TGG 0.164824 1:+87259992 MsG0180005117.01.T01:CDS
CTTCAACATGTAGCATCTTT+TGG 0.216012 1:+87256730 MsG0180005117.01.T01:intron
AGTTACAACATATTTGGATA+TGG 0.231474 1:+87259998 MsG0180005117.01.T01:CDS
ATCAGCATTTCTCGATCTTC+AGG 0.245771 1:-87256779 None:intergenic
TTTGTGTTCTTCCTTCTTGC+AGG 0.245866 1:-87262898 None:intergenic
ATGGTTGGATATTCTGATTC+TGG 0.258407 1:+87261879 MsG0180005117.01.T01:CDS
CTCTAAAAGCTTCTGAAAAC+TGG 0.293404 1:-87258903 None:intergenic
TCCCACCCCGAGATGAAAAT+TGG 0.299079 1:+87262737 MsG0180005117.01.T01:CDS
GAAATGGTAGAGGCTAAGTT+TGG 0.300010 1:+87262640 MsG0180005117.01.T01:CDS
TGAAACAGCTGACCAGCTTT+TGG 0.305920 1:+87259665 MsG0180005117.01.T01:CDS
CCCAGCAGCAATCCCATTTA+CGG 0.307234 1:-87263394 None:intergenic
ATGGGATGAAGAAAAGAAAT+TGG 0.307389 1:+87260034 MsG0180005117.01.T01:CDS
GCTTGCTGCTATTGGAGAAT+TGG 0.313039 1:+87261214 MsG0180005117.01.T01:CDS
CTTCAGCAATCATGTGGGTC+TGG 0.317808 1:+87259788 MsG0180005117.01.T01:intron
AGAAACTTCAGCAGAATAAT+AGG 0.322124 1:+87263244 MsG0180005117.01.T01:CDS
TAGACCTTATTGAGATGGTT+AGG 0.323614 1:+87263090 MsG0180005117.01.T01:intron
CTCACCTTTGCGGTAACGTT+TGG 0.334654 1:-87257373 None:intergenic
CTATTCCCTGGGTATTTGCT+TGG 0.336715 1:+87262941 MsG0180005117.01.T01:CDS
GTAGCTGCTTGCAATGATTA+TGG 0.337387 1:+87261960 MsG0180005117.01.T01:CDS
ATTCGTAGAGTTGCAACCTT+TGG 0.349488 1:+87259842 MsG0180005117.01.T01:CDS
CCACAGCTCCCTCAACTTGC+TGG 0.351216 1:+87258926 MsG0180005117.01.T01:CDS
TGGCTATTGACCTCTATATT+CGG 0.351376 1:+87257693 MsG0180005117.01.T01:CDS
CTGTTTCACTTCTATCTAGA+TGG 0.356352 1:+87257669 MsG0180005117.01.T01:CDS
ACTTGCACTCCCATAAAGTT+TGG 0.358450 1:+87257319 MsG0180005117.01.T01:CDS
CAGTCATTATCTTACTATGA+TGG 0.363104 1:+87255780 MsG0180005117.01.T01:CDS
TCTCACAGGTTTGAATATAG+TGG 0.366572 1:+87257128 MsG0180005117.01.T01:intron
GGTTCGTAAAGGAGGGAATA+TGG 0.367321 1:+87256199 MsG0180005117.01.T01:CDS
CTAGCTGCATTACAGGAATC+TGG 0.367694 1:+87259951 MsG0180005117.01.T01:intron
GCCACTAGTACCTGTTAGTA+TGG 0.367990 1:+87260088 MsG0180005117.01.T01:CDS
TTCAGCAATCATGTGGGTCT+GGG 0.368013 1:+87259789 MsG0180005117.01.T01:intron
CAATCCCATGAACCTGTTGC+AGG 0.368697 1:+87263305 MsG0180005117.01.T01:CDS
AGGAAGAACACAAAGGGAAT+TGG 0.369646 1:+87262907 MsG0180005117.01.T01:CDS
TAACTGAACCAGCACCTCTT+AGG 0.373958 1:-87261697 None:intergenic
GATGCACGGCTTGCTGCTAT+TGG 0.377320 1:+87261206 MsG0180005117.01.T01:CDS
ATCCAAGTTCCAAACTTTAT+GGG 0.378571 1:-87257328 None:intergenic
CTGCTTCAGGCGTGGCTTCG+TGG 0.378796 1:-87262846 None:intergenic
TGGCCGCTTCACTGCTGCTT+GGG 0.379895 1:+87261911 MsG0180005117.01.T01:CDS
TTTCCCAGGACAACTCTATA+AGG 0.392064 1:-87258956 None:intergenic
CTTCCAGCTTGGCTCGGAGT+TGG 0.392451 1:+87262981 MsG0180005117.01.T01:CDS
AGTCTATTGATAAAAGTTTC+CGG 0.395571 1:-87261721 None:intergenic
CTGGCCGCTTCACTGCTGCT+TGG 0.395587 1:+87261910 MsG0180005117.01.T01:CDS
CTAGCACATGAAATTCTAGA+AGG 0.398688 1:+87257776 MsG0180005117.01.T01:CDS
TAATAGGAGCTTGAGGAGGT+TGG 0.402520 1:+87263260 MsG0180005117.01.T01:CDS
TGCTCCTTATAGAGTTGTCC+TGG 0.405365 1:+87258952 MsG0180005117.01.T01:CDS
GCTCCTCTGTTATGAATCTC+TGG 0.406497 1:+87259695 MsG0180005117.01.T01:CDS
CTCCCATAAAGTTTGGAACT+TGG 0.409973 1:+87257326 MsG0180005117.01.T01:CDS
CTCCACCTGCAACAGGTTCA+TGG 0.410924 1:-87263310 None:intergenic
AGAGCTTCGATGATGATTGT+AGG 0.410996 1:+87255302 MsG0180005117.01.T01:CDS
ACATATTTACATTAGGTTGC+GGG 0.414213 1:+87261646 MsG0180005117.01.T01:intron
GCTATTCAGTCCCAACCACC+TGG 0.416046 1:+87262050 MsG0180005117.01.T01:CDS
AGGAGCCTATGTGATATCTA+TGG 0.416320 1:+87261038 MsG0180005117.01.T01:CDS
GAAACCTTCGTGCTATTCCC+TGG 0.416675 1:+87262929 MsG0180005117.01.T01:CDS
ACCGTAAATGGGATTGCTGC+TGG 0.417768 1:+87263393 MsG0180005117.01.T01:CDS
TGCTGATGTTAAAGAAGTCT+TGG 0.419254 1:+87260975 MsG0180005117.01.T01:CDS
AGAAATGCTGATTGAGGATC+TGG 0.420397 1:+87256790 MsG0180005117.01.T01:CDS
TGTCTCACCTCCATACTAAC+AGG 0.425394 1:-87260098 None:intergenic
GTTACAACATATTTGGATAT+GGG 0.425578 1:+87259999 MsG0180005117.01.T01:CDS
TCCTTCACGGTTTCAAATAG+AGG 0.428095 1:-87261674 None:intergenic
GAGGTGCTGGTTCAGTTATC+CGG 0.429326 1:+87261702 MsG0180005117.01.T01:CDS
CTTGCTGCTATTGGAGAATT+GGG 0.430420 1:+87261215 MsG0180005117.01.T01:CDS
TCAGAATCTCCACCTGCAAC+AGG 0.436922 1:-87263317 None:intergenic
AGGCGGTGGCCCTACATATC+TGG 0.437685 1:+87262028 MsG0180005117.01.T01:CDS
TGCATGTGACTATGATCCTT+TGG 0.439479 1:+87259635 MsG0180005117.01.T01:CDS
AACACTTCGGTCTACCGAGC+AGG 0.441668 1:+87262615 MsG0180005117.01.T01:CDS
GGCTATTGACCTCTATATTC+GGG 0.443763 1:+87257694 MsG0180005117.01.T01:CDS
TGAGAGAGATAACTTCAATA+TGG 0.445525 1:+87256939 MsG0180005117.01.T01:CDS
GGCAGTATTGGTCGAGGCGG+TGG 0.449566 1:+87262014 MsG0180005117.01.T01:CDS
TGTTAAGAAGCAGTGTTAAC+CGG 0.450188 1:-87263427 None:intergenic
CCAGCTCTAGCTTCATCAAC+TGG 0.450656 1:-87256995 None:intergenic
GTCTACCGAGCAGGGAGAAA+TGG 0.450962 1:+87262624 MsG0180005117.01.T01:CDS
CATAAAGTTTGGAACTTGGA+TGG 0.451055 1:+87257330 MsG0180005117.01.T01:CDS
TTCCGAATCGCTGCTGAACT+AGG 0.451804 1:+87261003 MsG0180005117.01.T01:CDS
ACTGTGTTGTAAAGATCATC+CGG 0.454214 1:-87256281 None:intergenic
ACCAGATTGTTCTTCCAGCT+TGG 0.454325 1:+87262970 MsG0180005117.01.T01:CDS
AGGAAGCCGAGCTCTGCTTC+AGG 0.462959 1:-87262859 None:intergenic
CATCACAGACCCAGGTGGTT+GGG 0.463137 1:-87262060 None:intergenic
CTTTGCTTATCACCGTAAAT+GGG 0.463812 1:+87263382 MsG0180005117.01.T01:CDS
TTTCCCTAACCATCTCAATA+AGG 0.464025 1:-87263094 None:intergenic
ATATGGGTACTTATAGTGAA+TGG 0.464922 1:+87260015 MsG0180005117.01.T01:CDS
TACAATCATCATCGAAGCTC+TGG 0.466446 1:-87255300 None:intergenic
CCTGGGAAATGTAAAGGATA+AGG 0.469149 1:+87258970 MsG0180005117.01.T01:CDS
GGCAGAGTGCATGTAATATG+AGG 0.469229 1:+87255656 MsG0180005117.01.T01:intron
CACTGCAATACAAACACATT+CGG 0.470757 1:+87256604 MsG0180005117.01.T01:CDS
AGTCATTATCTTACTATGAT+GGG 0.472061 1:+87255781 MsG0180005117.01.T01:CDS
GGAGCAGAGGTTCCAAAAGC+TGG 0.475317 1:-87259677 None:intergenic
TGAAAATTGGCGTAGTCTCA+TGG 0.476454 1:+87262750 MsG0180005117.01.T01:CDS
TTGTGTTCTTCCTTCTTGCA+GGG 0.476962 1:-87262897 None:intergenic
TCCCTAGTTCAGCAGCGATT+CGG 0.477789 1:-87261005 None:intergenic
TGTGCAGGGTGGAGTTTCCC+CGG 0.478623 1:+87256262 MsG0180005117.01.T01:CDS
GCTTGGCTCGGAGTTGGAGC+AGG 0.478720 1:+87262987 MsG0180005117.01.T01:CDS
CATGGCCGTGGAGGCAGTAT+TGG 0.479015 1:+87262002 MsG0180005117.01.T01:CDS
GAGCAATTCCAGCAAGTTGA+GGG 0.480050 1:-87258934 None:intergenic
ATTGTTCTTCCAGCTTGGCT+CGG 0.482407 1:+87262975 MsG0180005117.01.T01:CDS
AAGACTTCTTTAACATCAGC+AGG 0.482543 1:-87260973 None:intergenic
AGGTTCATGGGATTGAGAAA+TGG 0.484409 1:-87263297 None:intergenic
GAGGGTAAATGAGCTCTAGC+TGG 0.485019 1:-87258297 None:intergenic
AGACCTTATTGAGATGGTTA+GGG 0.488459 1:+87263091 MsG0180005117.01.T01:intron
TTGGGAACTTTACAAAGCTC+AGG 0.497178 1:+87261929 MsG0180005117.01.T01:CDS
CAGGGCGACTACCTATGTTC+AGG 0.498058 1:-87262879 None:intergenic
GGAGTGCAAGTCAGTGGAAG+TGG 0.498492 1:-87257307 None:intergenic
TGTGTTTAACCAGCTTGTGC+AGG 0.501342 1:+87256247 MsG0180005117.01.T01:CDS
CTCTACCATTTCTCCCTGCT+CGG 0.502297 1:-87262629 None:intergenic
CTGTATATGCAGGTTATGGT+TGG 0.505392 1:+87261864 MsG0180005117.01.T01:intron
GCTCCAACTCCGAGCCAAGC+TGG 0.505446 1:-87262984 None:intergenic
ACGAGAATCGCCATGAGAGT+TGG 0.506900 1:+87258232 MsG0180005117.01.T01:CDS
TGACCTCTATATTCGGGAAG+TGG 0.507739 1:+87257700 MsG0180005117.01.T01:CDS
GACATTCTTCACCGTGAAGT+TGG 0.507840 1:+87255346 MsG0180005117.01.T01:CDS
CCATGTCTTCAGCAATCATG+TGG 0.508496 1:+87259782 MsG0180005117.01.T01:intron
AGCACCTCTTAGGTCCTTCA+CGG 0.509480 1:-87261687 None:intergenic
CAATACTGCCTCCACGGCCA+TGG 0.510703 1:-87262001 None:intergenic
GCTCTAGCTGGAAGCTGTGT+TGG 0.512706 1:-87258285 None:intergenic
AAATGGTAGAGGCTAAGTTT+GGG 0.514174 1:+87262641 MsG0180005117.01.T01:CDS
GAAGAAGTTCTAACCGTCTA+CGG 0.515159 1:-87259602 None:intergenic
GATGATGATTGTAGGTTGCT+TGG 0.516176 1:+87255310 MsG0180005117.01.T01:CDS
CGATCTTCAGGGCTAAGATC+AGG 0.517591 1:-87256767 None:intergenic
TCAGCATTTCTCGATCTTCA+GGG 0.517745 1:-87256778 None:intergenic
TCATCTCGGGGTGGGAGAGG+TGG 0.518044 1:-87262730 None:intergenic
TATCCACTTCCCGAATATAG+AGG 0.519946 1:-87257703 None:intergenic
TCCACCTGCAACAGGTTCAT+GGG 0.520556 1:-87263309 None:intergenic
GCCGAGCTCTGCTTCAGGCG+TGG 0.520653 1:-87262854 None:intergenic
CCTTATCCTTTACATTTCCC+AGG 0.522515 1:-87258970 None:intergenic
ATTATGTGTACCAGCAAAAG+AGG 0.526645 1:-87258316 None:intergenic
AGTTGTCCTGGGAAATGTAA+AGG 0.527528 1:+87258964 MsG0180005117.01.T01:CDS
TCTGATTCTGGTAAAGATGC+TGG 0.527744 1:+87261891 MsG0180005117.01.T01:CDS
TCCGAATCGCTGCTGAACTA+GGG 0.530013 1:+87261004 MsG0180005117.01.T01:CDS
AAACCTTCGTGCTATTCCCT+GGG 0.530352 1:+87262930 MsG0180005117.01.T01:CDS
TACAATAGACCTTATTGAGA+TGG 0.531083 1:+87263085 MsG0180005117.01.T01:intron
CTTGCCTCTCCTCTGACACA+AGG 0.531845 1:-87263152 None:intergenic
GATTTGAGCTATCTATGAAT+CGG 0.532118 1:+87257732 MsG0180005117.01.T01:CDS
TGGAAGTAAGAAAGGAACTC+TGG 0.534013 1:-87262826 None:intergenic
ATAAAGTTTGGAACTTGGAT+GGG 0.536672 1:+87257331 MsG0180005117.01.T01:CDS
TATGGCAGACAGATGAGCTT+AGG 0.537663 1:+87256957 MsG0180005117.01.T01:CDS
GACTGAATAGCCAGATATGT+AGG 0.537677 1:-87262038 None:intergenic
CTAGCTTCATCAACTGGAGT+GGG 0.537880 1:-87256989 None:intergenic
TAGAGTTGCAACCTTTGGAA+TGG 0.539927 1:+87259847 MsG0180005117.01.T01:CDS
TAGCTGCATTACAGGAATCT+GGG 0.541027 1:+87259952 MsG0180005117.01.T01:intron
GCCAAGCTGGAAGAACAATC+TGG 0.541240 1:-87262971 None:intergenic
CAAAGGTGGTACCAACTTCA+CGG 0.542181 1:-87255357 None:intergenic
TGTTCGTCGATTAATTTGTG+TGG 0.545050 1:-87256583 None:intergenic
GCAAGAAGGAAGAACACAAA+GGG 0.545085 1:+87262901 MsG0180005117.01.T01:CDS
CGTGTTCACAGGGTTCGTAA+AGG 0.546242 1:+87256188 MsG0180005117.01.T01:intron
GGGTGGGAGAGGTGGACGAA+GGG 0.547195 1:-87262722 None:intergenic
CTTCATTAAAACCATTCCAA+AGG 0.547879 1:-87259858 None:intergenic
AAGTTTGTGCTCGTGATTAG+TGG 0.548271 1:+87263216 MsG0180005117.01.T01:CDS
AAGGGCTTCATCATAGTACT+TGG 0.548292 1:-87263133 None:intergenic
AAAAGTTAGTTACTTGAGCA+AGG 0.549708 1:-87255405 None:intergenic
CCATCACAGACCCAGGTGGT+TGG 0.550298 1:-87262061 None:intergenic
TATGGGTACTTATAGTGAAT+GGG 0.550472 1:+87260016 MsG0180005117.01.T01:CDS
GTGAAGGACCTAAGAGGTGC+TGG 0.552645 1:+87261689 MsG0180005117.01.T01:CDS
TGGAGATTCTGAAGAGGTTG+AGG 0.553888 1:+87263328 MsG0180005117.01.T01:CDS
GCATGTAATATGAGGCAAGC+AGG 0.554017 1:+87255664 MsG0180005117.01.T01:CDS
TGATGAAGCCCTTGTGTCAG+AGG 0.554453 1:+87263143 MsG0180005117.01.T01:CDS
AGATCGAGAAATGCTGATTG+AGG 0.555540 1:+87256784 MsG0180005117.01.T01:CDS
GTTCACAGGGTTCGTAAAGG+AGG 0.555920 1:+87256191 MsG0180005117.01.T01:intron
TGGCTTCGTGGAAGTAAGAA+AGG 0.556061 1:-87262834 None:intergenic
ATGGGATTGCTGCTGGGATG+AGG 0.557054 1:+87263400 MsG0180005117.01.T01:CDS
GGAGCAATTCCAGCAAGTTG+AGG 0.557720 1:-87258935 None:intergenic
TCAGCAATCATGTGGGTCTG+GGG 0.558099 1:+87259790 MsG0180005117.01.T01:intron
GGGGTGGGAGAGGTGGACGA+AGG 0.558545 1:-87262723 None:intergenic
ATTAAAGTTACACTATTCCA+TGG 0.558555 1:+87261984 MsG0180005117.01.T01:CDS
CCAGTTGATGAAGCTAGAGC+TGG 0.561704 1:+87256995 MsG0180005117.01.T01:CDS
AGTTTGTGCTCGTGATTAGT+GGG 0.563717 1:+87263217 MsG0180005117.01.T01:CDS
GCTCCTTATAGAGTTGTCCT+GGG 0.565302 1:+87258953 MsG0180005117.01.T01:CDS
GCCACGCCTGAAGCAGAGCT+CGG 0.565662 1:+87262853 MsG0180005117.01.T01:CDS
AATGAAGCTTGATTTACGCC+AGG 0.565768 1:+87259874 MsG0180005117.01.T01:CDS
TGGACTGATTCCAACTCTCA+TGG 0.566823 1:-87258242 None:intergenic
GTGTTTAACCAGCTTGTGCA+GGG 0.568664 1:+87256248 MsG0180005117.01.T01:CDS
TTCACTTCTATCTAGATGGA+TGG 0.571403 1:+87257673 MsG0180005117.01.T01:CDS
GTTACACTATTCCATGGCCG+TGG 0.572502 1:+87261990 MsG0180005117.01.T01:CDS
CTGACACGTCGTAAATAATG+AGG 0.573177 1:-87257174 None:intergenic
GATTCATAACAGAGGAGCAG+AGG 0.575099 1:-87259690 None:intergenic
GCTGCTGGGATGAGGAATAC+CGG 0.577928 1:+87263408 MsG0180005117.01.T01:CDS
TAGGTAGTCGCCCTGCAAGA+AGG 0.578256 1:+87262887 MsG0180005117.01.T01:CDS
GTTCGTCGATTAATTTGTGT+GGG 0.578693 1:-87256582 None:intergenic
GGGTCTGGGGTGCTAGCTGA+TGG 0.578897 1:+87259803 MsG0180005117.01.T01:CDS
CAAGAGAGCTGAAAGGAAAG+AGG 0.580073 1:+87260066 MsG0180005117.01.T01:CDS
CCCTCTATTTGAAACCGTGA+AGG 0.582239 1:+87261673 MsG0180005117.01.T01:CDS
AAACTCCACCCTGCACAAGC+TGG 0.582588 1:-87256256 None:intergenic
CCGTAAATGGGATTGCTGCT+GGG 0.582637 1:+87263394 MsG0180005117.01.T01:CDS
AAGTGACTGACTTCTATTCG+TGG 0.582977 1:-87258262 None:intergenic
TTCGAGTTTGTCAACAAAGG+TGG 0.583706 1:-87255371 None:intergenic
TGTCAGCAATGCTTTAAAGA+AGG 0.584116 1:+87257191 MsG0180005117.01.T01:CDS
ATATAGTGGAGCAGTCACTC+TGG 0.585383 1:+87257142 MsG0180005117.01.T01:CDS
GTTCCCAAGCAGCAGTGAAG+CGG 0.586086 1:-87261914 None:intergenic
TCCCATGAACCTGTTGCAGG+TGG 0.586186 1:+87263308 MsG0180005117.01.T01:CDS
CCTTCACGGTTTCAAATAGA+GGG 0.586828 1:-87261673 None:intergenic
AGCAGAATAATAGGAGCTTG+AGG 0.589386 1:+87263253 MsG0180005117.01.T01:CDS
TTGCCTCTCCTCTGACACAA+GGG 0.590774 1:-87263151 None:intergenic
AAATCCAAACGTTACCGCAA+AGG 0.593471 1:+87257369 MsG0180005117.01.T01:CDS
CTATTCAGTCCCAACCACCT+GGG 0.594998 1:+87262051 MsG0180005117.01.T01:CDS
TTCACAGGGTTCGTAAAGGA+GGG 0.596243 1:+87256192 MsG0180005117.01.T01:intron
GCAAGCAGGTATAGTGAACA+TGG 0.596263 1:+87255678 MsG0180005117.01.T01:CDS
AGCTTGAGAGAAGCCGTAGA+CGG 0.598721 1:+87259589 MsG0180005117.01.T01:intron
ACTGAATAGCCAGATATGTA+GGG 0.599957 1:-87262037 None:intergenic
CCAACCACCTGGGTCTGTGA+TGG 0.600411 1:+87262061 MsG0180005117.01.T01:CDS
GGTTCTTAATGACGTGCTCG+CGG 0.600425 1:-87261748 None:intergenic
CGTGGAGGCAGTATTGGTCG+AGG 0.601373 1:+87262008 MsG0180005117.01.T01:CDS
CTGTGTTGTAAAGATCATCC+GGG 0.602908 1:-87256280 None:intergenic
GAAACCGTGAAGGACCTAAG+AGG 0.603322 1:+87261683 MsG0180005117.01.T01:CDS
TCTAGCTTCATCAACTGGAG+TGG 0.604729 1:-87256990 None:intergenic
AAGTTTGGAACTTGGATGGG+AGG 0.608594 1:+87257334 MsG0180005117.01.T01:CDS
TCTTTCGAGTTTGTCAACAA+AGG 0.610094 1:-87255374 None:intergenic
TGGATGGGAGGTGATAGAGA+TGG 0.610576 1:+87257346 MsG0180005117.01.T01:CDS
GAACCACAATGGACATCAAG+AGG 0.612446 1:+87261766 MsG0180005117.01.T01:CDS
CATGTCTTCAGCAATCATGT+GGG 0.620570 1:+87259783 MsG0180005117.01.T01:intron
GTTCCTACTTACGTTCCACC+AGG 0.621553 1:-87261248 None:intergenic
GCTGTTTCATAATAATCCAA+AGG 0.621583 1:-87259651 None:intergenic
GCACCTCTTGATGTCCATTG+TGG 0.622223 1:-87261769 None:intergenic
TCAGAGGAGAGGCAAGAACT+CGG 0.623021 1:+87263159 MsG0180005117.01.T01:CDS
TCCATACTAACAGGTACTAG+TGG 0.624015 1:-87260089 None:intergenic
CCAGCAAGTTGAGGGAGCTG+TGG 0.625144 1:-87258926 None:intergenic
CTCGACCAATACTGCCTCCA+CGG 0.625263 1:-87262007 None:intergenic
GGAACTTTACAAAGCTCAGG+AGG 0.626662 1:+87261932 MsG0180005117.01.T01:CDS
TTTATGGGAGTGCAAGTCAG+TGG 0.628326 1:-87257313 None:intergenic
CGAGCAGGGAGAAATGGTAG+AGG 0.629375 1:+87262630 MsG0180005117.01.T01:CDS
ACACTTCGGTCTACCGAGCA+GGG 0.629832 1:+87262616 MsG0180005117.01.T01:CDS
TTGAGTCCAAGCAAATACCC+AGG 0.630631 1:-87262947 None:intergenic
AAGCCCTTGTGTCAGAGGAG+AGG 0.630970 1:+87263148 MsG0180005117.01.T01:CDS
GGCAATTATTCATACACTCG+AGG 0.633269 1:-87261061 None:intergenic
GTGTATTGCAGGGAACACTT+CGG 0.637688 1:+87262602 MsG0180005117.01.T01:intron
ACACTATTCCATGGCCGTGG+AGG 0.640049 1:+87261993 MsG0180005117.01.T01:CDS
TTCTTAACAAGAGAGCTGAA+AGG 0.641838 1:+87260059 MsG0180005117.01.T01:CDS
TTGGGAAGAGCATGTCCTGG+TGG 0.644240 1:+87261233 MsG0180005117.01.T01:CDS
ACGGTTAGAACTTCTTCTTG+AGG 0.647683 1:+87259608 MsG0180005117.01.T01:CDS
TCATAGATAGCTCAAATCTG+AGG 0.648141 1:-87257727 None:intergenic
CGAGGCCATAGATATCACAT+AGG 0.648602 1:-87261043 None:intergenic
GTATAGCTGAAACTCACCAT+AGG 0.648779 1:+87255803 MsG0180005117.01.T01:CDS
TAACCTACCATCACAGACCC+AGG 0.649354 1:-87262068 None:intergenic
TTATGTGTACCAGCAAAAGA+GGG 0.650285 1:-87258315 None:intergenic
TCTGTAAAAGCTCTACTGCA+AGG 0.652755 1:-87261181 None:intergenic
GAATTGGGAAGAGCATGTCC+TGG 0.653296 1:+87261230 MsG0180005117.01.T01:CDS
TGCAAGAAGGAAGAACACAA+AGG 0.657542 1:+87262900 MsG0180005117.01.T01:CDS
TTTAACCAGCTTGTGCAGGG+TGG 0.657609 1:+87256251 MsG0180005117.01.T01:CDS
ACTAGTACCTGTTAGTATGG+AGG 0.666381 1:+87260091 MsG0180005117.01.T01:CDS
CACGTCATTAAGAACCACAA+TGG 0.667175 1:+87261755 MsG0180005117.01.T01:CDS
TGAGTCCAAGCAAATACCCA+GGG 0.675293 1:-87262946 None:intergenic
AGAATAATAGGAGCTTGAGG+AGG 0.677598 1:+87263256 MsG0180005117.01.T01:CDS
GAGCTCGGCTTCCTGAACAT+AGG 0.682691 1:+87262868 MsG0180005117.01.T01:CDS
AGTTGTCTAACAGCTATCTG+TGG 0.683037 1:-87262667 None:intergenic
TGCAGGTGGAGATTCTGAAG+AGG 0.686065 1:+87263322 MsG0180005117.01.T01:CDS
GTACCAGAGATTCATAACAG+AGG 0.693986 1:-87259698 None:intergenic
GGAGGCAGTATTGGTCGAGG+CGG 0.705601 1:+87262011 MsG0180005117.01.T01:CDS
TGTGTTGTAAAGATCATCCG+GGG 0.722012 1:-87256279 None:intergenic
CCTACCATCACAGACCCAGG+TGG 0.773370 1:-87262065 None:intergenic
ATACCCAGGGAATAGCACGA+AGG 0.786673 1:-87262933 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAAAGTAATAATAATT+TGG + Chr1:87257070-87257089 MsG0180005117.01.T01:intron 10.0%
!! ACAAAATAGAATTTATATTA+AGG - Chr1:87258526-87258545 None:intergenic 10.0%
!!! ATTCATTTAATTTTATGTTA+TGG + Chr1:87261806-87261825 MsG0180005117.01.T01:intron 10.0%
!!! TGTATATTTTCTTAATTAAT+AGG + Chr1:87258704-87258723 MsG0180005117.01.T01:intron 10.0%
!! AATAAACAAGAAAAACATTA+AGG - Chr1:87256451-87256470 None:intergenic 15.0%
!! TAAAAAAATGTAAAACAAAC+TGG - Chr1:87256520-87256539 None:intergenic 15.0%
!! TCATATTTATCATTAAAAGA+TGG - Chr1:87260234-87260253 None:intergenic 15.0%
!! TTCTAAGCAAAAATATAAAA+AGG - Chr1:87260468-87260487 None:intergenic 15.0%
!! TTTATATCAACTTCTAATTA+TGG + Chr1:87260498-87260517 MsG0180005117.01.T01:intron 15.0%
!!! AGTTGTTTTATAAGTTATAT+TGG + Chr1:87261485-87261504 MsG0180005117.01.T01:intron 15.0%
!!! TAATGTTTTTCTTGTTTATT+TGG + Chr1:87256451-87256470 MsG0180005117.01.T01:intron 15.0%
!!! TATTTTCTTAATTAATAGGA+TGG + Chr1:87258708-87258727 MsG0180005117.01.T01:intron 15.0%
!!! TTTTAGCTTTTCAATATAAT+TGG - Chr1:87260546-87260565 None:intergenic 15.0%
!! AAAAGAAAGTCTCATTAATT+TGG - Chr1:87260378-87260397 None:intergenic 20.0%
!! AAATTATACTTGCATGTTAT+TGG + Chr1:87259084-87259103 MsG0180005117.01.T01:intron 20.0%
!! AAATTGTAGTCATAATTTCA+AGG - Chr1:87261088-87261107 None:intergenic 20.0%
!! AATGCATGCATTTATTATAA+TGG - Chr1:87259560-87259579 None:intergenic 20.0%
!! AGCAAAAATATAAAAAGGAT+TGG - Chr1:87260463-87260482 None:intergenic 20.0%
!! CAAAAAATTGGAATTAAGAA+TGG + Chr1:87258036-87258055 MsG0180005117.01.T01:intron 20.0%
!! TAAAATCAAATTCATAGTTG+AGG - Chr1:87262479-87262498 None:intergenic 20.0%
!! TAATAGTACTTTCCAAATTT+CGG + Chr1:87255870-87255889 MsG0180005117.01.T01:intron 20.0%
!! TATTATAAATCTGTATATGC+AGG + Chr1:87261854-87261873 MsG0180005117.01.T01:intron 20.0%
!! TCAACTTAGCTATAAAAAAA+GGG + Chr1:87259305-87259324 MsG0180005117.01.T01:intron 20.0%
!! TCTTATGACATATTTACATT+AGG + Chr1:87261639-87261658 MsG0180005117.01.T01:intron 20.0%
!! TGATAATAAATACACCAAAA+TGG - Chr1:87260350-87260369 None:intergenic 20.0%
!! TTAAACATTGACATAACAAT+AGG - Chr1:87257479-87257498 None:intergenic 20.0%
!! TTATCTGTTTAACTATTAAG+TGG + Chr1:87256872-87256891 MsG0180005117.01.T01:intron 20.0%
!! TTCAACTTAGCTATAAAAAA+AGG + Chr1:87259304-87259323 MsG0180005117.01.T01:intron 20.0%
!!! AAAGTATTAGCACAAAAAAT+TGG + Chr1:87258024-87258043 MsG0180005117.01.T01:intron 20.0%
!!! AATTAATGAGACTTTCTTTT+TGG + Chr1:87260378-87260397 MsG0180005117.01.T01:intron 20.0%
!!! AATTTTCACAATACAGATAT+AGG - Chr1:87261616-87261635 None:intergenic 20.0%
!!! ATTGGTATCTTGATTTTATT+AGG + Chr1:87260948-87260967 MsG0180005117.01.T01:intron 20.0%
!!! ATTTTCACAATACAGATATA+GGG - Chr1:87261615-87261634 None:intergenic 20.0%
!!! CAAATATTTTGTTCAACTTT+GGG + Chr1:87257605-87257624 MsG0180005117.01.T01:intron 20.0%
!!! CAATAATCTTAAGAACTTTT+AGG + Chr1:87262395-87262414 MsG0180005117.01.T01:intron 20.0%
!!! CATTCCATTGAATTTTTTAA+TGG - Chr1:87256658-87256677 None:intergenic 20.0%
!!! TAAACAATAAACATCCATTT+TGG - Chr1:87260414-87260433 None:intergenic 20.0%
!!! TAATTTTTTTGGTACATCAA+TGG + Chr1:87262176-87262195 MsG0180005117.01.T01:intron 20.0%
!!! TATCTTTTTCATGTAGAAAA+TGG + Chr1:87258582-87258601 MsG0180005117.01.T01:intron 20.0%
!!! TTTTTCTTGTTTATTTGGAA+TGG + Chr1:87256456-87256475 MsG0180005117.01.T01:intron 20.0%
!!! TTTTTTATTTTTGTTGCTTC+AGG + Chr1:87256533-87256552 MsG0180005117.01.T01:intron 20.0%
! AATAAGCTGTTTATCAAAAC+AGG - Chr1:87261354-87261373 None:intergenic 25.0%
! ACAATTTCCAAAAAAATGCA+AGG - Chr1:87256400-87256419 None:intergenic 25.0%
! ACATTGAAATCAAAGAGATA+TGG - Chr1:87258383-87258402 None:intergenic 25.0%
! ACCAACACTTATTATGATAA+GGG + Chr1:87261387-87261406 MsG0180005117.01.T01:intron 25.0%
! AGTCATTATCTTACTATGAT+GGG + Chr1:87255781-87255800 MsG0180005117.01.T01:CDS 25.0%
! AGTCTATTGATAAAAGTTTC+CGG - Chr1:87261724-87261743 None:intergenic 25.0%
! AGTTACAACATATTTGGATA+TGG + Chr1:87259998-87260017 MsG0180005117.01.T01:CDS 25.0%
! ATCAGACTAATTGAAAGAAA+GGG - Chr1:87261273-87261292 None:intergenic 25.0%
! ATTAAAGTTACACTATTCCA+TGG + Chr1:87261984-87262003 MsG0180005117.01.T01:CDS 25.0%
! CATAATTAGAAAATACTCTG+AGG - Chr1:87258149-87258168 None:intergenic 25.0%
! CATGATGACAAATGAAAATA+CGG - Chr1:87256909-87256928 None:intergenic 25.0%
! CCAAAGTTGAACAAAATATT+TGG - Chr1:87257607-87257626 None:intergenic 25.0%
! CCATAATCACACTAATAATA+TGG + Chr1:87261128-87261147 MsG0180005117.01.T01:intron 25.0%
! CCATATTATTAGTGTGATTA+TGG - Chr1:87261131-87261150 None:intergenic 25.0%
! GACATGAAAAGAACAAAAAA+TGG - Chr1:87256319-87256338 None:intergenic 25.0%
! GTAAATAAGTGACAAACATT+TGG + Chr1:87262277-87262296 MsG0180005117.01.T01:intron 25.0%
! GTTACAACATATTTGGATAT+GGG + Chr1:87259999-87260018 MsG0180005117.01.T01:CDS 25.0%
! TAAAAGCAATGTACAAAGAA+TGG + Chr1:87263048-87263067 MsG0180005117.01.T01:intron 25.0%
! TATACATTATATAGCATGCT+AGG - Chr1:87258690-87258709 None:intergenic 25.0%
! TATGAAATATAAATCGTACC+TGG - Chr1:87259895-87259914 None:intergenic 25.0%
! TGATGATATTATTCAAGTAC+AGG - Chr1:87257578-87257597 None:intergenic 25.0%
! TTATGAATACTAGTAACTGA+GGG + Chr1:87257442-87257461 MsG0180005117.01.T01:intron 25.0%
! TTGCACGAGAAATAATTATT+AGG + Chr1:87258488-87258507 MsG0180005117.01.T01:intron 25.0%
! TTGGCCATTAAAAAATTCAA+TGG + Chr1:87256651-87256670 MsG0180005117.01.T01:intron 25.0%
! TTTATGAATACTAGTAACTG+AGG + Chr1:87257441-87257460 MsG0180005117.01.T01:intron 25.0%
! TTTCATTTGTCATCATGATT+TGG + Chr1:87256912-87256931 MsG0180005117.01.T01:intron 25.0%
! TTTCTTAATTAATAGGATGG+TGG + Chr1:87258711-87258730 MsG0180005117.01.T01:intron 25.0%
!! CAAATCATTTGAAGCATTTA+CGG - Chr1:87259166-87259185 None:intergenic 25.0%
!! CCAAATATTTTGTTCAACTT+TGG + Chr1:87257604-87257623 MsG0180005117.01.T01:intron 25.0%
!! TATCAAGTATTGTATATGTC+AGG + Chr1:87257031-87257050 MsG0180005117.01.T01:intron 25.0%
!! TCTATTGTACTTTGAAAGAA+AGG - Chr1:87263074-87263093 None:intergenic 25.0%
!! TGTCTGTTGAATTTTACTTT+TGG + Chr1:87257801-87257820 MsG0180005117.01.T01:intron 25.0%
!! TGTGAGTATTTTACTTTGTT+TGG + Chr1:87256632-87256651 MsG0180005117.01.T01:intron 25.0%
!! TTATAGCTAAGTTGAAAAGA+TGG - Chr1:87259300-87259319 None:intergenic 25.0%
!! TTCAATTAGTCTGATCAAAA+TGG + Chr1:87261278-87261297 MsG0180005117.01.T01:intron 25.0%
!! TTGGAATTAGTTTACCAAAA+TGG + Chr1:87260397-87260416 MsG0180005117.01.T01:intron 25.0%
!!! AAACTGTTTTGGTTGAATTT+TGG + Chr1:87262364-87262383 MsG0180005117.01.T01:intron 25.0%
!!! ACTTTTTAAGTACTAATCAC+CGG - Chr1:87259014-87259033 None:intergenic 25.0%
!!! CGTTTTATTTTATTTCTCAC+AGG + Chr1:87257114-87257133 MsG0180005117.01.T01:intron 25.0%
!!! GAGGATTTAATTTGATTATC+AGG - Chr1:87262460-87262479 None:intergenic 25.0%
!!! GATGTTCCTATTTTTGTTTT+TGG + Chr1:87255635-87255654 MsG0180005117.01.T01:intron 25.0%
!!! TTCTTTCGTAGTTTTGTTAT+GGG + Chr1:87257508-87257527 MsG0180005117.01.T01:intron 25.0%
!!! TTTCTTTCGTAGTTTTGTTA+TGG + Chr1:87257507-87257526 MsG0180005117.01.T01:intron 25.0%
AAAAAGCAAAACCCCATAAA+AGG - Chr1:87255535-87255554 None:intergenic 30.0%
AAAAATCACTGTATTGTGAG+AGG + Chr1:87256841-87256860 MsG0180005117.01.T01:intron 30.0%
AAAAGTTAGTTACTTGAGCA+AGG - Chr1:87255408-87255427 None:intergenic 30.0%
AAAATTACAGCTAATTGACC+AGG - Chr1:87257233-87257252 None:intergenic 30.0%
AAATCTGTATATGCAGGTTA+TGG + Chr1:87261860-87261879 MsG0180005117.01.T01:intron 30.0%
AATTAGCTGCTTATAGCATA+AGG - Chr1:87256111-87256130 None:intergenic 30.0%
AATTGAAGATGAAGAACCAT+TGG - Chr1:87258811-87258830 None:intergenic 30.0%
AATTGGAATTAAGAATGGAG+AGG + Chr1:87258041-87258060 MsG0180005117.01.T01:intron 30.0%
ACAAGTTCAGAAAATTCCAA+TGG + Chr1:87258792-87258811 MsG0180005117.01.T01:intron 30.0%
ACTCTGCCAAAAACAAAAAT+AGG - Chr1:87255644-87255663 None:intergenic 30.0%
AGAAACTTCAGCAGAATAAT+AGG + Chr1:87263244-87263263 MsG0180005117.01.T01:CDS 30.0%
ATAACCTGCTTGAAACTTAA+TGG + Chr1:87262134-87262153 MsG0180005117.01.T01:intron 30.0%
ATATGGGTACTTATAGTGAA+TGG + Chr1:87260015-87260034 MsG0180005117.01.T01:CDS 30.0%
ATCCAAGTTCCAAACTTTAT+GGG - Chr1:87257331-87257350 None:intergenic 30.0%
ATGGGATGAAGAAAAGAAAT+TGG + Chr1:87260034-87260053 MsG0180005117.01.T01:CDS 30.0%
ATTAAGCTGTTTATCCAAAC+AGG + Chr1:87256128-87256147 MsG0180005117.01.T01:intron 30.0%
ATTCAACCAAAACAGTTTCA+TGG - Chr1:87262362-87262381 None:intergenic 30.0%
ATTGGAATTAAGAATGGAGA+GGG + Chr1:87258042-87258061 MsG0180005117.01.T01:intron 30.0%
CACCAACACTTATTATGATA+AGG + Chr1:87261386-87261405 MsG0180005117.01.T01:intron 30.0%
CACCATAGGTAAATAATCTA+CGG + Chr1:87255817-87255836 MsG0180005117.01.T01:intron 30.0%
CACTAACTCTGATTATTTGT+TGG + Chr1:87255843-87255862 MsG0180005117.01.T01:intron 30.0%
CAGAAAGTCAAAAATATCTG+AGG - Chr1:87258420-87258439 None:intergenic 30.0%
CAGAATTTATTCATTCACTC+AGG - Chr1:87260614-87260633 None:intergenic 30.0%
CAGTCATTATCTTACTATGA+TGG + Chr1:87255780-87255799 MsG0180005117.01.T01:CDS 30.0%
CATGTCTATCTACATATGTA+TGG + Chr1:87256333-87256352 MsG0180005117.01.T01:intron 30.0%
CCATGAAAAGTAAAAAAGTG+GGG - Chr1:87255463-87255482 None:intergenic 30.0%
CCCATGAAAAGTAAAAAAGT+GGG - Chr1:87255464-87255483 None:intergenic 30.0%
CTTCATTAAAACCATTCCAA+AGG - Chr1:87259861-87259880 None:intergenic 30.0%
CTTTCATAAGTTCTCATAAC+CGG - Chr1:87255946-87255965 None:intergenic 30.0%
GATCAGACTAATTGAAAGAA+AGG - Chr1:87261274-87261293 None:intergenic 30.0%
GATGGATAGATGTAGATTAT+TGG - Chr1:87259282-87259301 None:intergenic 30.0%
GATTTGAGCTATCTATGAAT+CGG + Chr1:87257732-87257751 MsG0180005117.01.T01:CDS 30.0%
GCAAAAATTTATGTTTCCCA+TGG + Chr1:87262580-87262599 MsG0180005117.01.T01:intron 30.0%
TACAATAGACCTTATTGAGA+TGG + Chr1:87263085-87263104 MsG0180005117.01.T01:intron 30.0%
TATGGGTACTTATAGTGAAT+GGG + Chr1:87260016-87260035 MsG0180005117.01.T01:CDS 30.0%
TATTGTACTTGTTTCACTCT+CGG + Chr1:87260863-87260882 MsG0180005117.01.T01:intron 30.0%
TCGAAGTAACAAGATTGAAT+TGG - Chr1:87257958-87257977 None:intergenic 30.0%
TCTCCATATGACATCAAAAT+TGG - Chr1:87260266-87260285 None:intergenic 30.0%
TGAGACTATTAAGAAGTGAA+TGG - Chr1:87260809-87260828 None:intergenic 30.0%
TGAGAGAGATAACTTCAATA+TGG + Chr1:87256939-87256958 MsG0180005117.01.T01:CDS 30.0%
TGATGCAGTTACAACATATT+TGG + Chr1:87259992-87260011 MsG0180005117.01.T01:CDS 30.0%
TGCATTATCAGAATATCTAC+TGG + Chr1:87259477-87259496 MsG0180005117.01.T01:intron 30.0%
TGTTAATGGTTTCAACTTCT+AGG + Chr1:87262237-87262256 MsG0180005117.01.T01:intron 30.0%
TTAAGCTGTTTATCCAAACA+GGG + Chr1:87256129-87256148 MsG0180005117.01.T01:intron 30.0%
TTAGCTGTATATCTTGTGTT+AGG + Chr1:87260162-87260181 MsG0180005117.01.T01:intron 30.0%
TTGTAGTCATAATTTCAAGG+TGG - Chr1:87261085-87261104 None:intergenic 30.0%
! ACATATTTACATTAGGTTGC+GGG + Chr1:87261646-87261665 MsG0180005117.01.T01:intron 30.0%
! ATAAAGTTTGGAACTTGGAT+GGG + Chr1:87257331-87257350 MsG0180005117.01.T01:CDS 30.0%
! ATAGATTTTCACATTCAGCA+AGG - Chr1:87255560-87255579 None:intergenic 30.0%
! ATTCTATTTTGTCATGCATG+AGG + Chr1:87258534-87258553 MsG0180005117.01.T01:intron 30.0%
! CAAACATTGATAGACCATTT+TGG + Chr1:87260333-87260352 MsG0180005117.01.T01:intron 30.0%
! CATAATTTTCTGATTGAGAC+TGG + Chr1:87259226-87259245 MsG0180005117.01.T01:intron 30.0%
! GAAAAGCTAAAACTTGTTTC+TGG + Chr1:87260554-87260573 MsG0180005117.01.T01:intron 30.0%
! GACATATTTACATTAGGTTG+CGG + Chr1:87261645-87261664 MsG0180005117.01.T01:intron 30.0%
! GCTGTTTCATAATAATCCAA+AGG - Chr1:87259654-87259673 None:intergenic 30.0%
! GGAAACTTTTATCAATAGAC+TGG + Chr1:87261723-87261742 MsG0180005117.01.T01:CDS 30.0%
! GTGACAAACATTTGGAATAT+TGG + Chr1:87262285-87262304 MsG0180005117.01.T01:intron 30.0%
! GTTTAACCATGAAACTGTTT+TGG + Chr1:87262353-87262372 MsG0180005117.01.T01:intron 30.0%
! TAAAACTTGTTCCTTAAGAC+TGG - Chr1:87262524-87262543 None:intergenic 30.0%
! TACTTTAGAAGAAAGATGTG+AGG - Chr1:87258010-87258029 None:intergenic 30.0%
! TACTTTCCAAATTTCGGTTT+TGG + Chr1:87255876-87255895 MsG0180005117.01.T01:intron 30.0%
! TAGATTTTCACATTCAGCAA+GGG - Chr1:87255559-87255578 None:intergenic 30.0%
! TTTGCTCTGTTTCCTTTTAT+GGG + Chr1:87255520-87255539 MsG0180005117.01.T01:intron 30.0%
! TTTTGCTCTGTTTCCTTTTA+TGG + Chr1:87255519-87255538 MsG0180005117.01.T01:intron 30.0%
!! ATTTGTCATCATGATTTGGT+AGG + Chr1:87256916-87256935 MsG0180005117.01.T01:intron 30.0%
!! CATACGAGTCTATTTTGAAA+AGG + Chr1:87260189-87260208 MsG0180005117.01.T01:intron 30.0%
!! GCTTTTTCCTTGCATTTTTT+TGG + Chr1:87256390-87256409 MsG0180005117.01.T01:intron 30.0%
!! GTTACTGATACTTTAAGACT+GGG - Chr1:87258774-87258793 None:intergenic 30.0%
!! TGTCCAATTTTGATGTCATA+TGG + Chr1:87260260-87260279 MsG0180005117.01.T01:intron 30.0%
!! TGTTACTGATACTTTAAGAC+TGG - Chr1:87258775-87258794 None:intergenic 30.0%
!! TTTTTGGTACATCAATGGTA+TGG + Chr1:87262181-87262200 MsG0180005117.01.T01:intron 30.0%
!!! CCACTTTTTTACTTTTCATG+GGG + Chr1:87255462-87255481 MsG0180005117.01.T01:intron 30.0%
!!! CCCACTTTTTTACTTTTCAT+GGG + Chr1:87255461-87255480 MsG0180005117.01.T01:intron 30.0%
!!! GTTTTTTTCATGAGCTATCT+TGG - Chr1:87256025-87256044 None:intergenic 30.0%
!!! TATTGGTTTCTTGGCATTTT+CGG + Chr1:87259101-87259120 MsG0180005117.01.T01:intron 30.0%
!!! TCACCAGCTGTTTTTATTTT+CGG + Chr1:87255981-87256000 MsG0180005117.01.T01:intron 30.0%
!!! TCTTTCGTAGTTTTGTTATG+GGG + Chr1:87257509-87257528 MsG0180005117.01.T01:intron 30.0%
!!! TTTATTTTTGTTGCTTCAGG+AGG + Chr1:87256536-87256555 MsG0180005117.01.T01:intron 30.0%
!!! TTTGGATTGGCTTATTTTGT+GGG - Chr1:87261588-87261607 None:intergenic 30.0%
AAATGGTAGAGGCTAAGTTT+GGG + Chr1:87262641-87262660 MsG0180005117.01.T01:CDS 35.0%
AAATTTACAGAATCCCAGAC+AGG + Chr1:87258875-87258894 MsG0180005117.01.T01:intron 35.0%
AACAGAAATTACGTGTTCAC+AGG + Chr1:87256177-87256196 MsG0180005117.01.T01:intron 35.0%
AAGACTTCTTTAACATCAGC+AGG - Chr1:87260976-87260995 None:intergenic 35.0%
AAGCCGAAAATAAAAACAGC+TGG - Chr1:87255987-87256006 None:intergenic 35.0%
AATTGATCTACCTTGTGATC+AGG - Chr1:87258641-87258660 None:intergenic 35.0%
ACAAACCTTTCATGAAAGAG+AGG - Chr1:87259734-87259753 None:intergenic 35.0%
ACAGAAATTACGTGTTCACA+GGG + Chr1:87256178-87256197 MsG0180005117.01.T01:intron 35.0%
ACTGAATAGCCAGATATGTA+GGG - Chr1:87262040-87262059 None:intergenic 35.0%
ACTGTGTTGTAAAGATCATC+CGG - Chr1:87256284-87256303 None:intergenic 35.0%
ACTTTCAACGAACAGCATTT+GGG - Chr1:87257887-87257906 None:intergenic 35.0%
AGACCTTATTGAGATGGTTA+GGG + Chr1:87263091-87263110 MsG0180005117.01.T01:intron 35.0%
AGCCGTAGATTATTTACCTA+TGG - Chr1:87255822-87255841 None:intergenic 35.0%
AGTTCGTGGCAATTTATGAT+TGG + Chr1:87260930-87260949 MsG0180005117.01.T01:intron 35.0%
ATGGTTGGATATTCTGATTC+TGG + Chr1:87261879-87261898 MsG0180005117.01.T01:CDS 35.0%
ATTATGTGTACCAGCAAAAG+AGG - Chr1:87258319-87258338 None:intergenic 35.0%
ATTGTATATGTCAGGTCTTC+TGG + Chr1:87257039-87257058 MsG0180005117.01.T01:intron 35.0%
ATTTCTCGTGCAATCAGAAA+GGG - Chr1:87258481-87258500 None:intergenic 35.0%
CAAAAAGTTACTTGCCCATA+GGG + Chr1:87261328-87261347 MsG0180005117.01.T01:intron 35.0%
CAAAATAAGCCAATCCAAAC+AGG + Chr1:87261589-87261608 MsG0180005117.01.T01:intron 35.0%
CAAACCTTTCATGAAAGAGA+GGG - Chr1:87259733-87259752 None:intergenic 35.0%
CACTGCAATACAAACACATT+CGG + Chr1:87256604-87256623 MsG0180005117.01.T01:CDS 35.0%
CATACCATTAAGTTTCAAGC+AGG - Chr1:87262141-87262160 None:intergenic 35.0%
CATCCAAGTTCCAAACTTTA+TGG - Chr1:87257332-87257351 None:intergenic 35.0%
CCCCATGAAAAGTAAAAAAG+TGG - Chr1:87255465-87255484 None:intergenic 35.0%
CTAGCACATGAAATTCTAGA+AGG + Chr1:87257776-87257795 MsG0180005117.01.T01:CDS 35.0%
CTATTACTCACTCTGATCAA+AGG - Chr1:87255610-87255629 None:intergenic 35.0%
CTGTTTCACTTCTATCTAGA+TGG + Chr1:87257669-87257688 MsG0180005117.01.T01:CDS 35.0%
CTTTGCTTATCACCGTAAAT+GGG + Chr1:87263382-87263401 MsG0180005117.01.T01:CDS 35.0%
GCCCTTATCATAATAAGTGT+TGG - Chr1:87261391-87261410 None:intergenic 35.0%
GCTTATGTATAAGCTTGCAT+AGG + Chr1:87261409-87261428 MsG0180005117.01.T01:intron 35.0%
GCTTGAAACTTAATGGTATG+AGG + Chr1:87262141-87262160 MsG0180005117.01.T01:intron 35.0%
GGAGAGTTAAATAGCAATTG+TGG - Chr1:87259764-87259783 None:intergenic 35.0%
GTACAATACCCAATAATGGT+GGG - Chr1:87259380-87259399 None:intergenic 35.0%
GTAGATCAATTCAGTGTTTG+TGG + Chr1:87258650-87258669 MsG0180005117.01.T01:intron 35.0%
GTCACATGATAGAAGACAAA+AGG - Chr1:87257863-87257882 None:intergenic 35.0%
GTTAAAAAAGCTCACCTTTG+CGG - Chr1:87257386-87257405 None:intergenic 35.0%
TACTTTCAACGAACAGCATT+TGG - Chr1:87257888-87257907 None:intergenic 35.0%
TAGACCTTATTGAGATGGTT+AGG + Chr1:87263090-87263109 MsG0180005117.01.T01:intron 35.0%
TATTTCTCGTGCAATCAGAA+AGG - Chr1:87258482-87258501 None:intergenic 35.0%
TCAAAAAGTTACTTGCCCAT+AGG + Chr1:87261327-87261346 MsG0180005117.01.T01:intron 35.0%
TCAGGCAACAAAAGTAATTC+CGG - Chr1:87260596-87260615 None:intergenic 35.0%
TCATAGATAGCTCAAATCTG+AGG - Chr1:87257730-87257749 None:intergenic 35.0%
TCTCACAGGTTTGAATATAG+TGG + Chr1:87257128-87257147 MsG0180005117.01.T01:intron 35.0%
TGATTACCATTACCCTATGT+AGG - Chr1:87256155-87256174 None:intergenic 35.0%
TGCTGATGTTAAAGAAGTCT+TGG + Chr1:87260975-87260994 MsG0180005117.01.T01:CDS 35.0%
TGGCTATTGACCTCTATATT+CGG + Chr1:87257693-87257712 MsG0180005117.01.T01:CDS 35.0%
TGTGATCATTTCAAAGTTCG+TGG + Chr1:87260916-87260935 MsG0180005117.01.T01:intron 35.0%
TTAACTGATTGAAACACCAG+CGG - Chr1:87256497-87256516 None:intergenic 35.0%
TTATGTGTACCAGCAAAAGA+GGG - Chr1:87258318-87258337 None:intergenic 35.0%
TTCACTTCTATCTAGATGGA+TGG + Chr1:87257673-87257692 MsG0180005117.01.T01:CDS 35.0%
TTCTTAACAAGAGAGCTGAA+AGG + Chr1:87260059-87260078 MsG0180005117.01.T01:CDS 35.0%
TTTATCAAAACAGGCCCTAT+GGG - Chr1:87261345-87261364 None:intergenic 35.0%
TTTCCCTAACCATCTCAATA+AGG - Chr1:87263097-87263116 None:intergenic 35.0%
! AGATTTTCACATTCAGCAAG+GGG - Chr1:87255558-87255577 None:intergenic 35.0%
! CATAAAGTTTGGAACTTGGA+TGG + Chr1:87257330-87257349 MsG0180005117.01.T01:CDS 35.0%
! CTCTAAAAGCTTCTGAAAAC+TGG - Chr1:87258906-87258925 None:intergenic 35.0%
! CTTCAACATGTAGCATCTTT+TGG + Chr1:87256730-87256749 MsG0180005117.01.T01:intron 35.0%
! GACATAAGATTGACTTCAAC+TGG + Chr1:87258109-87258128 MsG0180005117.01.T01:intron 35.0%
! GATTTTCGTAGACTACATTG+CGG - Chr1:87262807-87262826 None:intergenic 35.0%
! GTATTGCTTCAGATTGATTC+CGG + Chr1:87258992-87259011 MsG0180005117.01.T01:intron 35.0%
! TGGACTTTTGCTTGTTTATC+AGG + Chr1:87261148-87261167 MsG0180005117.01.T01:intron 35.0%
! TGTAAATTTCCTCTGAGAAG+CGG - Chr1:87258864-87258883 None:intergenic 35.0%
! TGTCACTTATTTACGATCCA+AGG - Chr1:87262271-87262290 None:intergenic 35.0%
! TGTTTTTCTGTTTGTTCCTC+AGG + Chr1:87257637-87257656 MsG0180005117.01.T01:intron 35.0%
! TTAGCCATTCTAAGAGTTGA+TGG + Chr1:87258182-87258201 MsG0180005117.01.T01:intron 35.0%
! TTGCTCTGTTTCCTTTTATG+GGG + Chr1:87255521-87255540 MsG0180005117.01.T01:intron 35.0%
!! CTTGCATGTTATTGGTTTCT+TGG + Chr1:87259092-87259111 MsG0180005117.01.T01:intron 35.0%
!! GTTCGTCGATTAATTTGTGT+GGG - Chr1:87256585-87256604 None:intergenic 35.0%
!! TCTTTCGAGTTTGTCAACAA+AGG - Chr1:87255377-87255396 None:intergenic 35.0%
!! TGTCAGCAATGCTTTAAAGA+AGG + Chr1:87257191-87257210 MsG0180005117.01.T01:CDS 35.0%
!! TGTTCGTCGATTAATTTGTG+TGG - Chr1:87256586-87256605 None:intergenic 35.0%
!!! CCCCACTTTTTTACTTTTCA+TGG + Chr1:87255460-87255479 MsG0180005117.01.T01:intron 35.0%
!!! CTTTCGTAGTTTTGTTATGG+GGG + Chr1:87257510-87257529 MsG0180005117.01.T01:intron 35.0%
!!! GATGGTGGCTGTAATTTTTT+TGG + Chr1:87262165-87262184 MsG0180005117.01.T01:intron 35.0%
!!! GTTTGGATTGGCTTATTTTG+TGG - Chr1:87261589-87261608 None:intergenic 35.0%
!!! TCCAAATTTCGGTTTTGGAT+TGG + Chr1:87255881-87255900 MsG0180005117.01.T01:intron 35.0%
AAAACTGGACTTTCCTGTCT+GGG - Chr1:87258891-87258910 None:intergenic 40.0%
AAATCCAAACGTTACCGCAA+AGG + Chr1:87257369-87257388 MsG0180005117.01.T01:CDS 40.0%
AACATAAGCACTTGTGTGAC+CGG + Chr1:87255924-87255943 MsG0180005117.01.T01:intron 40.0%
AACTTAATGGTATGAGGCGA+TGG + Chr1:87262147-87262166 MsG0180005117.01.T01:intron 40.0%
AAGGGCTTCATCATAGTACT+TGG - Chr1:87263136-87263155 None:intergenic 40.0%
AAGTTTGTGCTCGTGATTAG+TGG + Chr1:87263216-87263235 MsG0180005117.01.T01:CDS 40.0%
AATGAAGCTTGATTTACGCC+AGG + Chr1:87259874-87259893 MsG0180005117.01.T01:CDS 40.0%
ACGGAAGATGTAGAAATGCA+AGG - Chr1:87259147-87259166 None:intergenic 40.0%
ACGGTTAGAACTTCTTCTTG+AGG + Chr1:87259608-87259627 MsG0180005117.01.T01:CDS 40.0%
ACTAGTACCTGTTAGTATGG+AGG + Chr1:87260091-87260110 MsG0180005117.01.T01:CDS 40.0%
ACTTGCACTCCCATAAAGTT+TGG + Chr1:87257319-87257338 MsG0180005117.01.T01:CDS 40.0%
AGAATAATAGGAGCTTGAGG+AGG + Chr1:87263256-87263275 MsG0180005117.01.T01:CDS 40.0%
AGAGCTTCGATGATGATTGT+AGG + Chr1:87255302-87255321 MsG0180005117.01.T01:CDS 40.0%
AGCAGAATAATAGGAGCTTG+AGG + Chr1:87263253-87263272 MsG0180005117.01.T01:CDS 40.0%
AGCCTCCTGTGTAAAAAACA+GGG - Chr1:87259412-87259431 None:intergenic 40.0%
AGGAAGAACACAAAGGGAAT+TGG + Chr1:87262907-87262926 MsG0180005117.01.T01:CDS 40.0%
AGGAGCCTATGTGATATCTA+TGG + Chr1:87261038-87261057 MsG0180005117.01.T01:CDS 40.0%
AGGTTCATGGGATTGAGAAA+TGG - Chr1:87263300-87263319 None:intergenic 40.0%
AGTTGTCCTGGGAAATGTAA+AGG + Chr1:87258964-87258983 MsG0180005117.01.T01:CDS 40.0%
AGTTGTCTAACAGCTATCTG+TGG - Chr1:87262670-87262689 None:intergenic 40.0%
AGTTTGTGCTCGTGATTAGT+GGG + Chr1:87263217-87263236 MsG0180005117.01.T01:CDS 40.0%
ATACAGATATAGGGCCTGTT+TGG - Chr1:87261606-87261625 None:intergenic 40.0%
ATCAGCATTTCTCGATCTTC+AGG - Chr1:87256782-87256801 None:intergenic 40.0%
ATTCGTAGAGTTGCAACCTT+TGG + Chr1:87259842-87259861 MsG0180005117.01.T01:CDS 40.0%
CACGTCATTAAGAACCACAA+TGG + Chr1:87261755-87261774 MsG0180005117.01.T01:CDS 40.0%
CATGTCTTCAGCAATCATGT+GGG + Chr1:87259783-87259802 MsG0180005117.01.T01:intron 40.0%
CCTGGGAAATGTAAAGGATA+AGG + Chr1:87258970-87258989 MsG0180005117.01.T01:CDS 40.0%
CCTGTGTAAAAAACAGGGTA+AGG - Chr1:87259407-87259426 None:intergenic 40.0%
CCTTATCCTTTACATTTCCC+AGG - Chr1:87258973-87258992 None:intergenic 40.0%
CCTTCACGGTTTCAAATAGA+GGG - Chr1:87261676-87261695 None:intergenic 40.0%
CGTACAATACCCAATAATGG+TGG - Chr1:87259381-87259400 None:intergenic 40.0%
CTGACACGTCGTAAATAATG+AGG - Chr1:87257177-87257196 None:intergenic 40.0%
CTGCGTACAATACCCAATAA+TGG - Chr1:87259384-87259403 None:intergenic 40.0%
CTGGAAATGCAGTTAAGACT+CGG + Chr1:87260573-87260592 MsG0180005117.01.T01:intron 40.0%
CTGTATATGCAGGTTATGGT+TGG + Chr1:87261864-87261883 MsG0180005117.01.T01:intron 40.0%
CTGTGTTGTAAAGATCATCC+GGG - Chr1:87256283-87256302 None:intergenic 40.0%
CTTGCTGCTATTGGAGAATT+GGG + Chr1:87261215-87261234 MsG0180005117.01.T01:CDS 40.0%
CTTTCCAGTATGCTGCAAAA+TGG - Chr1:87257287-87257306 None:intergenic 40.0%
GAAATGGTAGAGGCTAAGTT+TGG + Chr1:87262640-87262659 MsG0180005117.01.T01:CDS 40.0%
GAATGTAATGTCTATACCGC+TGG + Chr1:87256478-87256497 MsG0180005117.01.T01:intron 40.0%
GACTGAATAGCCAGATATGT+AGG - Chr1:87262041-87262060 None:intergenic 40.0%
GATGATGATTGTAGGTTGCT+TGG + Chr1:87255310-87255329 MsG0180005117.01.T01:CDS 40.0%
GCAAGAAGGAAGAACACAAA+GGG + Chr1:87262901-87262920 MsG0180005117.01.T01:CDS 40.0%
GCCAATCCAAAACCGAAATT+TGG - Chr1:87255885-87255904 None:intergenic 40.0%
GCTATAAAAAAAGGGCAACC+CGG + Chr1:87259313-87259332 MsG0180005117.01.T01:intron 40.0%
GCTTTGCTTATCACCGTAAA+TGG + Chr1:87263381-87263400 MsG0180005117.01.T01:CDS 40.0%
GGCAATTATTCATACACTCG+AGG - Chr1:87261064-87261083 None:intergenic 40.0%
GGCTATTGACCTCTATATTC+GGG + Chr1:87257694-87257713 MsG0180005117.01.T01:CDS 40.0%
GGTCTATCATCTTGAATTCC+TGG + Chr1:87257212-87257231 MsG0180005117.01.T01:intron 40.0%
GGTTGACTAGAGTTGTAAGA+GGG - Chr1:87258843-87258862 None:intergenic 40.0%
GTACCAGAGATTCATAACAG+AGG - Chr1:87259701-87259720 None:intergenic 40.0%
GTAGCTGCTTGCAATGATTA+TGG + Chr1:87261960-87261979 MsG0180005117.01.T01:CDS 40.0%
GTATAGCTGAAACTCACCAT+AGG + Chr1:87255803-87255822 MsG0180005117.01.T01:CDS 40.0%
GTGACCATCAACTCTTAGAA+TGG - Chr1:87258189-87258208 None:intergenic 40.0%
GTTTATCAAAACAGGCCCTA+TGG - Chr1:87261346-87261365 None:intergenic 40.0%
TACAATCATCATCGAAGCTC+TGG - Chr1:87255303-87255322 None:intergenic 40.0%
TAGCTGCATTACAGGAATCT+GGG + Chr1:87259952-87259971 MsG0180005117.01.T01:intron 40.0%
TATCCACTTCCCGAATATAG+AGG - Chr1:87257706-87257725 None:intergenic 40.0%
TCAGCATTTCTCGATCTTCA+GGG - Chr1:87256781-87256800 None:intergenic 40.0%
TCATGCATGAGGAATGATGA+GGG + Chr1:87258545-87258564 MsG0180005117.01.T01:intron 40.0%
TCCATACTAACAGGTACTAG+TGG - Chr1:87260092-87260111 None:intergenic 40.0%
TCCTTCACGGTTTCAAATAG+AGG - Chr1:87261677-87261696 None:intergenic 40.0%
TCGACAGATCATTTGAGTGT+CGG - Chr1:87258451-87258470 None:intergenic 40.0%
TCTGATTCTGGTAAAGATGC+TGG + Chr1:87261891-87261910 MsG0180005117.01.T01:CDS 40.0%
TCTGTAAAAGCTCTACTGCA+AGG - Chr1:87261184-87261203 None:intergenic 40.0%
TGAAAATTGGCGTAGTCTCA+TGG + Chr1:87262750-87262769 MsG0180005117.01.T01:CDS 40.0%
TGCAAGAAGGAAGAACACAA+AGG + Chr1:87262900-87262919 MsG0180005117.01.T01:CDS 40.0%
TGCATGTGACTATGATCCTT+TGG + Chr1:87259635-87259654 MsG0180005117.01.T01:CDS 40.0%
TGCTTGTGAGAAAGGTCATA+GGG + Chr1:87263019-87263038 MsG0180005117.01.T01:intron 40.0%
TGGAAATGCAGTTAAGACTC+CGG + Chr1:87260574-87260593 MsG0180005117.01.T01:intron 40.0%
TGGAAATGCAGTTAAGACTC+GGG + Chr1:87260574-87260593 MsG0180005117.01.T01:intron 40.0%
TGGAAGTAAGAAAGGAACTC+TGG - Chr1:87262829-87262848 None:intergenic 40.0%
TGTGTTGTAAAGATCATCCG+GGG - Chr1:87256282-87256301 None:intergenic 40.0%
TTACAACACAGTCTGCAAAC+AGG + Chr1:87256292-87256311 MsG0180005117.01.T01:intron 40.0%
TTGGGAACTTTACAAAGCTC+AGG + Chr1:87261929-87261948 MsG0180005117.01.T01:CDS 40.0%
TTGTGTTCTTCCTTCTTGCA+GGG - Chr1:87262900-87262919 None:intergenic 40.0%
TTTCCCAGGACAACTCTATA+AGG - Chr1:87258959-87258978 None:intergenic 40.0%
TTTCTCGTGCAATCAGAAAG+GGG - Chr1:87258480-87258499 None:intergenic 40.0%
TTTGTGTTCTTCCTTCTTGC+AGG - Chr1:87262901-87262920 None:intergenic 40.0%
! AAGTGACTGACTTCTATTCG+TGG - Chr1:87258265-87258284 None:intergenic 40.0%
! ACTACGCCAATTTTCATCTC+GGG - Chr1:87262746-87262765 None:intergenic 40.0%
! AGAAATGCTGATTGAGGATC+TGG + Chr1:87256790-87256809 MsG0180005117.01.T01:CDS 40.0%
! AGATCGAGAAATGCTGATTG+AGG + Chr1:87256784-87256803 MsG0180005117.01.T01:CDS 40.0%
! AGCTTTATAGTGACGTGCAA+TGG - Chr1:87256373-87256392 None:intergenic 40.0%
! AGCTTTTACAGAAGGATGCA+CGG + Chr1:87261192-87261211 MsG0180005117.01.T01:CDS 40.0%
! CTATCCATTTTGCAGCATAC+TGG + Chr1:87257280-87257299 MsG0180005117.01.T01:intron 40.0%
! CTCCCATAAAGTTTGGAACT+TGG + Chr1:87257326-87257345 MsG0180005117.01.T01:CDS 40.0%
! GAAGAAGTTCTAACCGTCTA+CGG - Chr1:87259605-87259624 None:intergenic 40.0%
! GACTACGCCAATTTTCATCT+CGG - Chr1:87262747-87262766 None:intergenic 40.0%
! GAGTCTTATGACCAGTCTTA+AGG + Chr1:87262510-87262529 MsG0180005117.01.T01:intron 40.0%
! GCAAAGCATCTCTGAGTTTA+AGG - Chr1:87263368-87263387 None:intergenic 40.0%
! TAGAGTTGCAACCTTTGGAA+TGG + Chr1:87259847-87259866 MsG0180005117.01.T01:CDS 40.0%
! TGCAGTAGAGCTTTTACAGA+AGG + Chr1:87261184-87261203 MsG0180005117.01.T01:CDS 40.0%
! TTCGAGTTTGTCAACAAAGG+TGG - Chr1:87255374-87255393 None:intergenic 40.0%
!! ACTTCTAGGACTTGATTCCT+TGG + Chr1:87262251-87262270 MsG0180005117.01.T01:intron 40.0%
!! ATGAGAGGTTGGTGTGTTAA+TGG + Chr1:87262223-87262242 MsG0180005117.01.T01:intron 40.0%
!! TTGAAAGGTGCTTGTGAGAA+AGG + Chr1:87263011-87263030 MsG0180005117.01.T01:intron 40.0%
!!! CCTTACCCTGTTTTTTACAC+AGG + Chr1:87259404-87259423 MsG0180005117.01.T01:intron 40.0%
!!! TACCCTGTTTTTTACACAGG+AGG + Chr1:87259407-87259426 MsG0180005117.01.T01:intron 40.0%
AACACACCAACCTCTCATGT+GGG - Chr1:87262221-87262240 None:intergenic 45.0%
AAGGTGAATGCTAAGTCCCT+TGG - Chr1:87257844-87257863 None:intergenic 45.0%
ACCAGATTGTTCTTCCAGCT+TGG + Chr1:87262970-87262989 MsG0180005117.01.T01:CDS 45.0%
AGTCCAACTACACTCAGAAC+TGG + Chr1:87258744-87258763 MsG0180005117.01.T01:intron 45.0%
ATCCAAACAGGGCCTACATA+GGG + Chr1:87256140-87256159 MsG0180005117.01.T01:intron 45.0%
ATCTACCTTGTGATCAGGTC+CGG - Chr1:87258636-87258655 None:intergenic 45.0%
ATTCAGAAACGAGCTGTCAG+CGG - Chr1:87262547-87262566 None:intergenic 45.0%
ATTGTTCTTCCAGCTTGGCT+CGG + Chr1:87262975-87262994 MsG0180005117.01.T01:CDS 45.0%
CAAAGGTGGTACCAACTTCA+CGG - Chr1:87255360-87255379 None:intergenic 45.0%
CAAGAGAGCTGAAAGGAAAG+AGG + Chr1:87260066-87260085 MsG0180005117.01.T01:CDS 45.0%
CAGCCTCCTGTGTAAAAAAC+AGG - Chr1:87259413-87259432 None:intergenic 45.0%
CATGCATGAGGAATGATGAG+GGG + Chr1:87258546-87258565 MsG0180005117.01.T01:intron 45.0%
CCACATGATTGCTGAAGACA+TGG - Chr1:87259785-87259804 None:intergenic 45.0%
CCATGTCTTCAGCAATCATG+TGG + Chr1:87259782-87259801 MsG0180005117.01.T01:intron 45.0%
CCTGAAACTAGCTGCATTAC+AGG + Chr1:87259944-87259963 MsG0180005117.01.T01:intron 45.0%
CCTTCCCTCTCTTTCATGAA+AGG + Chr1:87259726-87259745 MsG0180005117.01.T01:intron 45.0%
CCTTTCATGAAAGAGAGGGA+AGG - Chr1:87259729-87259748 None:intergenic 45.0%
CGAGGCCATAGATATCACAT+AGG - Chr1:87261046-87261065 None:intergenic 45.0%
CGGTTGACTAGAGTTGTAAG+AGG - Chr1:87258844-87258863 None:intergenic 45.0%
CTAGCTGCATTACAGGAATC+TGG + Chr1:87259951-87259970 MsG0180005117.01.T01:intron 45.0%
CTAGCTTCATCAACTGGAGT+GGG - Chr1:87256992-87257011 None:intergenic 45.0%
CTATTCCCTGGGTATTTGCT+TGG + Chr1:87262941-87262960 MsG0180005117.01.T01:CDS 45.0%
GAAAACTGGACTTTCCTGTC+TGG - Chr1:87258892-87258911 None:intergenic 45.0%
GAACCACAATGGACATCAAG+AGG + Chr1:87261766-87261785 MsG0180005117.01.T01:CDS 45.0%
GACATTCTTCACCGTGAAGT+TGG + Chr1:87255346-87255365 MsG0180005117.01.T01:CDS 45.0%
GAGATTCTTCCTAGTGCCAA+GGG + Chr1:87257825-87257844 MsG0180005117.01.T01:intron 45.0%
GAGTTGTAAGAGGGAGAAGA+TGG - Chr1:87258834-87258853 None:intergenic 45.0%
GATATAGGGCCTGTTTGGAT+TGG - Chr1:87261601-87261620 None:intergenic 45.0%
GATTCATAACAGAGGAGCAG+AGG - Chr1:87259693-87259712 None:intergenic 45.0%
GCAAGCAGGTATAGTGAACA+TGG + Chr1:87255678-87255697 MsG0180005117.01.T01:CDS 45.0%
GCATGTAATATGAGGCAAGC+AGG + Chr1:87255664-87255683 MsG0180005117.01.T01:CDS 45.0%
GCCACTAGTACCTGTTAGTA+TGG + Chr1:87260088-87260107 MsG0180005117.01.T01:CDS 45.0%
GCTCCTCTGTTATGAATCTC+TGG + Chr1:87259695-87259714 MsG0180005117.01.T01:CDS 45.0%
GCTCCTTATAGAGTTGTCCT+GGG + Chr1:87258953-87258972 MsG0180005117.01.T01:CDS 45.0%
GGAACTTTACAAAGCTCAGG+AGG + Chr1:87261932-87261951 MsG0180005117.01.T01:CDS 45.0%
GGCAGAGTGCATGTAATATG+AGG + Chr1:87255656-87255675 MsG0180005117.01.T01:intron 45.0%
GGTTCGTAAAGGAGGGAATA+TGG + Chr1:87256199-87256218 MsG0180005117.01.T01:CDS 45.0%
GTCATGCATGAGGAATGATG+AGG + Chr1:87258544-87258563 MsG0180005117.01.T01:intron 45.0%
GTGCTTGTGAGAAAGGTCAT+AGG + Chr1:87263018-87263037 MsG0180005117.01.T01:intron 45.0%
GTGTATTGCAGGGAACACTT+CGG + Chr1:87262602-87262621 MsG0180005117.01.T01:intron 45.0%
GTGTTTAACCAGCTTGTGCA+GGG + Chr1:87256248-87256267 MsG0180005117.01.T01:CDS 45.0%
GTTTCCCATGGTGTATTGCA+GGG + Chr1:87262592-87262611 MsG0180005117.01.T01:intron 45.0%
TAACACACCAACCTCTCATG+TGG - Chr1:87262222-87262241 None:intergenic 45.0%
TAACTGAACCAGCACCTCTT+AGG - Chr1:87261700-87261719 None:intergenic 45.0%
TAATAGGAGCTTGAGGAGGT+TGG + Chr1:87263260-87263279 MsG0180005117.01.T01:CDS 45.0%
TATCCAAACAGGGCCTACAT+AGG + Chr1:87256139-87256158 MsG0180005117.01.T01:intron 45.0%
TATGGCAGACAGATGAGCTT+AGG + Chr1:87256957-87256976 MsG0180005117.01.T01:CDS 45.0%
TGACCTCTATATTCGGGAAG+TGG + Chr1:87257700-87257719 MsG0180005117.01.T01:CDS 45.0%
TGAGTCCAAGCAAATACCCA+GGG - Chr1:87262949-87262968 None:intergenic 45.0%
TGCTCCTTATAGAGTTGTCC+TGG + Chr1:87258952-87258971 MsG0180005117.01.T01:CDS 45.0%
TGGAATGATGCAGCAGATCA+AGG - Chr1:87260443-87260462 None:intergenic 45.0%
TGGCTTCGTGGAAGTAAGAA+AGG - Chr1:87262837-87262856 None:intergenic 45.0%
TGTCTCACCTCCATACTAAC+AGG - Chr1:87260101-87260120 None:intergenic 45.0%
TGTGTTTAACCAGCTTGTGC+AGG + Chr1:87256247-87256266 MsG0180005117.01.T01:CDS 45.0%
TGTTCCCTGCAATACACCAT+GGG - Chr1:87262599-87262618 None:intergenic 45.0%
TGTTTCCCATGGTGTATTGC+AGG + Chr1:87262591-87262610 MsG0180005117.01.T01:intron 45.0%
TTAATGGTATGAGGCGATGG+TGG + Chr1:87262150-87262169 MsG0180005117.01.T01:intron 45.0%
TTCACAGGGTTCGTAAAGGA+GGG + Chr1:87256192-87256211 MsG0180005117.01.T01:intron 45.0%
TTCAGCAATCATGTGGGTCT+GGG + Chr1:87259789-87259808 MsG0180005117.01.T01:intron 45.0%
TTGAGTCCAAGCAAATACCC+AGG - Chr1:87262950-87262969 None:intergenic 45.0%
! AAACCTTCGTGCTATTCCCT+GGG + Chr1:87262930-87262949 MsG0180005117.01.T01:CDS 45.0%
! AAGTTTGGAACTTGGATGGG+AGG + Chr1:87257334-87257353 MsG0180005117.01.T01:CDS 45.0%
! AATCGCTGATAGTGAGCACT+TGG - Chr1:87257415-87257434 None:intergenic 45.0%
! ACTCTGATCAAAGGTGTGTC+CGG - Chr1:87255601-87255620 None:intergenic 45.0%
! ATATAGTGGAGCAGTCACTC+TGG + Chr1:87257142-87257161 MsG0180005117.01.T01:CDS 45.0%
! CCCTCTATTTGAAACCGTGA+AGG + Chr1:87261673-87261692 MsG0180005117.01.T01:CDS 45.0%
! CCTGTAATGCAGCTAGTTTC+AGG - Chr1:87259947-87259966 None:intergenic 45.0%
! CTACGCCAATTTTCATCTCG+GGG - Chr1:87262745-87262764 None:intergenic 45.0%
! GAAACAGCTTTTGTGACCTG+AGG - Chr1:87257656-87257675 None:intergenic 45.0%
! GAACTAGGGAGCGATTTTCT+AGG + Chr1:87261018-87261037 MsG0180005117.01.T01:CDS 45.0%
! GAGCAATTCCAGCAAGTTGA+GGG - Chr1:87258937-87258956 None:intergenic 45.0%
! GCACAAACTTTTCAGCTGTC+AGG - Chr1:87263206-87263225 None:intergenic 45.0%
! GCTCATTTACCCTCTTTTGC+TGG + Chr1:87258306-87258325 MsG0180005117.01.T01:CDS 45.0%
! GCTTGCTGCTATTGGAGAAT+TGG + Chr1:87261214-87261233 MsG0180005117.01.T01:CDS 45.0%
! GTTCTGAGTGTAGTTGGACT+TGG - Chr1:87258744-87258763 None:intergenic 45.0%
! TCTAGCTTCATCAACTGGAG+TGG - Chr1:87256993-87257012 None:intergenic 45.0%
! TGAAACAGCTGACCAGCTTT+TGG + Chr1:87259665-87259684 MsG0180005117.01.T01:CDS 45.0%
! TGGACTGATTCCAACTCTCA+TGG - Chr1:87258245-87258264 None:intergenic 45.0%
! TGGAGATTCTGAAGAGGTTG+AGG + Chr1:87263328-87263347 MsG0180005117.01.T01:CDS 45.0%
! TTTATGGGAGTGCAAGTCAG+TGG - Chr1:87257316-87257335 None:intergenic 45.0%
!! CATCAACTGGAGTGGGTTTT+TGG - Chr1:87256985-87257004 None:intergenic 45.0%
!! TTGCCAGTTCTGAGTGTAGT+TGG - Chr1:87258750-87258769 None:intergenic 45.0%
!!! TCGTAGTTTTGTTATGGGGG+TGG + Chr1:87257513-87257532 MsG0180005117.01.T01:intron 45.0%
!!! TTTTTTTTTCAAAAAAAAAT+TGG - Chr1:87262114-87262133 None:intergenic 5.0%
ACAGGGCCTACATAGGGTAA+TGG + Chr1:87256146-87256165 MsG0180005117.01.T01:intron 50.0%
ACCGTAAATGGGATTGCTGC+TGG + Chr1:87263393-87263412 MsG0180005117.01.T01:CDS 50.0%
ACGAGAATCGCCATGAGAGT+TGG + Chr1:87258232-87258251 MsG0180005117.01.T01:CDS 50.0%
AGCACCTCTTAGGTCCTTCA+CGG - Chr1:87261690-87261709 None:intergenic 50.0%
AGCTTGAGAGAAGCCGTAGA+CGG + Chr1:87259589-87259608 MsG0180005117.01.T01:intron 50.0%
ATACCCAGGGAATAGCACGA+AGG - Chr1:87262936-87262955 None:intergenic 50.0%
ATGCTAAGTCCCTTGGCACT+AGG - Chr1:87257837-87257856 None:intergenic 50.0%
CAATCCCATGAACCTGTTGC+AGG + Chr1:87263305-87263324 MsG0180005117.01.T01:CDS 50.0%
CCCAGCAGCAATCCCATTTA+CGG - Chr1:87263397-87263416 None:intergenic 50.0%
CCGTAAATGGGATTGCTGCT+GGG + Chr1:87263394-87263413 MsG0180005117.01.T01:CDS 50.0%
CGAGATTCTTCCTAGTGCCA+AGG + Chr1:87257824-87257843 MsG0180005117.01.T01:intron 50.0%
CGATCTTCAGGGCTAAGATC+AGG - Chr1:87256770-87256789 None:intergenic 50.0%
CGTGTTCACAGGGTTCGTAA+AGG + Chr1:87256188-87256207 MsG0180005117.01.T01:intron 50.0%
CTATTCAGTCCCAACCACCT+GGG + Chr1:87262051-87262070 MsG0180005117.01.T01:CDS 50.0%
CTCACCTTTGCGGTAACGTT+TGG - Chr1:87257376-87257395 None:intergenic 50.0%
CTCTACCATTTCTCCCTGCT+CGG - Chr1:87262632-87262651 None:intergenic 50.0%
CTTCAGCAATCATGTGGGTC+TGG + Chr1:87259788-87259807 MsG0180005117.01.T01:intron 50.0%
GAAACCGTGAAGGACCTAAG+AGG + Chr1:87261683-87261702 MsG0180005117.01.T01:CDS 50.0%
GAAGGGGTCCCACCATTATT+GGG + Chr1:87259369-87259388 MsG0180005117.01.T01:intron 50.0%
GCACCTCTTGATGTCCATTG+TGG - Chr1:87261772-87261791 None:intergenic 50.0%
GCATCCTAGACTAGACATCC+CGG + Chr1:87258614-87258633 MsG0180005117.01.T01:intron 50.0%
GCCAAGCTGGAAGAACAATC+TGG - Chr1:87262974-87262993 None:intergenic 50.0%
GGAGCAATTCCAGCAAGTTG+AGG - Chr1:87258938-87258957 None:intergenic 50.0%
GGAGTTGGAGCAGGTTTGAA+AGG + Chr1:87262996-87263015 MsG0180005117.01.T01:intron 50.0%
GGTTCTTAATGACGTGCTCG+CGG - Chr1:87261751-87261770 None:intergenic 50.0%
GTGTTCCCTGCAATACACCA+TGG - Chr1:87262600-87262619 None:intergenic 50.0%
GTTACACTATTCCATGGCCG+TGG + Chr1:87261990-87262009 MsG0180005117.01.T01:CDS 50.0%
GTTCACAGGGTTCGTAAAGG+AGG + Chr1:87256191-87256210 MsG0180005117.01.T01:intron 50.0%
GTTCCTACTTACGTTCCACC+AGG - Chr1:87261251-87261270 None:intergenic 50.0%
TAACCTACCATCACAGACCC+AGG - Chr1:87262071-87262090 None:intergenic 50.0%
TACCCTATGTAGGCCCTGTT+TGG - Chr1:87256145-87256164 None:intergenic 50.0%
TATCCAGCATCCCACATGAG+AGG + Chr1:87262208-87262227 MsG0180005117.01.T01:intron 50.0%
TCAGAATCTCCACCTGCAAC+AGG - Chr1:87263320-87263339 None:intergenic 50.0%
TCAGAGGAGAGGCAAGAACT+CGG + Chr1:87263159-87263178 MsG0180005117.01.T01:CDS 50.0%
TCAGCAATCATGTGGGTCTG+GGG + Chr1:87259790-87259809 MsG0180005117.01.T01:intron 50.0%
TCCACCTGCAACAGGTTCAT+GGG - Chr1:87263312-87263331 None:intergenic 50.0%
TCCCACCCCGAGATGAAAAT+TGG + Chr1:87262737-87262756 MsG0180005117.01.T01:CDS 50.0%
TCCCTAGTTCAGCAGCGATT+CGG - Chr1:87261008-87261027 None:intergenic 50.0%
TCCGAATCGCTGCTGAACTA+GGG + Chr1:87261004-87261023 MsG0180005117.01.T01:CDS 50.0%
TCTACCTTGTGATCAGGTCC+GGG - Chr1:87258635-87258654 None:intergenic 50.0%
TCTAGTCAACCGCTTCTCAG+AGG + Chr1:87258852-87258871 MsG0180005117.01.T01:intron 50.0%
TGATGAAGCCCTTGTGTCAG+AGG + Chr1:87263143-87263162 MsG0180005117.01.T01:CDS 50.0%
TGGATGGGAGGTGATAGAGA+TGG + Chr1:87257346-87257365 MsG0180005117.01.T01:CDS 50.0%
TGTCCTGGTGGAACGTAAGT+AGG + Chr1:87261245-87261264 MsG0180005117.01.T01:intron 50.0%
TTCCGAATCGCTGCTGAACT+AGG + Chr1:87261003-87261022 MsG0180005117.01.T01:CDS 50.0%
TTGCCTCTCCTCTGACACAA+GGG - Chr1:87263154-87263173 None:intergenic 50.0%
TTTAACCAGCTTGTGCAGGG+TGG + Chr1:87256251-87256270 MsG0180005117.01.T01:CDS 50.0%
! CCAGCTCTAGCTTCATCAAC+TGG - Chr1:87256998-87257017 None:intergenic 50.0%
! GAAACCTTCGTGCTATTCCC+TGG + Chr1:87262929-87262948 MsG0180005117.01.T01:CDS 50.0%
! GAATTGGGAAGAGCATGTCC+TGG + Chr1:87261230-87261249 MsG0180005117.01.T01:CDS 50.0%
! GAGGGTAAATGAGCTCTAGC+TGG - Chr1:87258300-87258319 None:intergenic 50.0%
! GCCAATTTTCATCTCGGGGT+GGG - Chr1:87262741-87262760 None:intergenic 50.0%
! GCTGATAGTGAGCACTTGGA+TGG - Chr1:87257411-87257430 None:intergenic 50.0%
! TGCAGGTGGAGATTCTGAAG+AGG + Chr1:87263322-87263341 MsG0180005117.01.T01:CDS 50.0%
!! CCAGTTGATGAAGCTAGAGC+TGG + Chr1:87256995-87257014 MsG0180005117.01.T01:CDS 50.0%
!! GAGGTGCTGGTTCAGTTATC+CGG + Chr1:87261702-87261721 MsG0180005117.01.T01:CDS 50.0%
!! TGAAGCACTGACACAGACAC+CGG + Chr1:87255579-87255598 MsG0180005117.01.T01:intron 50.0%
AAACTCCACCCTGCACAAGC+TGG - Chr1:87256259-87256278 None:intergenic 55.0%
AACACTTCGGTCTACCGAGC+AGG + Chr1:87262615-87262634 MsG0180005117.01.T01:CDS 55.0%
AAGCCCTTGTGTCAGAGGAG+AGG + Chr1:87263148-87263167 MsG0180005117.01.T01:CDS 55.0%
ACACTATTCCATGGCCGTGG+AGG + Chr1:87261993-87262012 MsG0180005117.01.T01:CDS 55.0%
ACACTTCGGTCTACCGAGCA+GGG + Chr1:87262616-87262635 MsG0180005117.01.T01:CDS 55.0%
ACATCCCGGACCTGATCACA+AGG + Chr1:87258628-87258647 MsG0180005117.01.T01:intron 55.0%
AGGTCCGGGATGTCTAGTCT+AGG - Chr1:87258621-87258640 None:intergenic 55.0%
ATGGGATTGCTGCTGGGATG+AGG + Chr1:87263400-87263419 MsG0180005117.01.T01:CDS 55.0%
CAACCTCTCATGTGGGATGC+TGG - Chr1:87262214-87262233 None:intergenic 55.0%
CAGCATCCCACATGAGAGGT+TGG + Chr1:87262212-87262231 MsG0180005117.01.T01:intron 55.0%
CAGGGCGACTACCTATGTTC+AGG - Chr1:87262882-87262901 None:intergenic 55.0%
CATCACAGACCCAGGTGGTT+GGG - Chr1:87262063-87262082 None:intergenic 55.0%
CGAGCAGGGAGAAATGGTAG+AGG + Chr1:87262630-87262649 MsG0180005117.01.T01:CDS 55.0%
CTCCACCTGCAACAGGTTCA+TGG - Chr1:87263313-87263332 None:intergenic 55.0%
CTCGACCAATACTGCCTCCA+CGG - Chr1:87262010-87262029 None:intergenic 55.0%
CTTGCCTCTCCTCTGACACA+AGG - Chr1:87263155-87263174 None:intergenic 55.0%
GAGCTCGGCTTCCTGAACAT+AGG + Chr1:87262868-87262887 MsG0180005117.01.T01:CDS 55.0%
GCTATTCAGTCCCAACCACC+TGG + Chr1:87262050-87262069 MsG0180005117.01.T01:CDS 55.0%
GCTCTAGCTGGAAGCTGTGT+TGG - Chr1:87258288-87258307 None:intergenic 55.0%
GCTGCTGGGATGAGGAATAC+CGG + Chr1:87263408-87263427 MsG0180005117.01.T01:CDS 55.0%
GGAAGGGGTCCCACCATTAT+TGG + Chr1:87259368-87259387 MsG0180005117.01.T01:intron 55.0%
GGAGCAGAGGTTCCAAAAGC+TGG - Chr1:87259680-87259699 None:intergenic 55.0%
GGAGTGCAAGTCAGTGGAAG+TGG - Chr1:87257310-87257329 None:intergenic 55.0%
GTCTACCGAGCAGGGAGAAA+TGG + Chr1:87262624-87262643 MsG0180005117.01.T01:CDS 55.0%
GTTCCCAAGCAGCAGTGAAG+CGG - Chr1:87261917-87261936 None:intergenic 55.0%
TAGGTAGTCGCCCTGCAAGA+AGG + Chr1:87262887-87262906 MsG0180005117.01.T01:CDS 55.0%
TCCCATGAACCTGTTGCAGG+TGG + Chr1:87263308-87263327 MsG0180005117.01.T01:CDS 55.0%
TTAAAGCTCCCGCACACGCA+GGG + Chr1:87259341-87259360 MsG0180005117.01.T01:intron 55.0%
! ATAATGGTGGGACCCCTTCC+CGG - Chr1:87259368-87259387 None:intergenic 55.0%
! CGCCAATTTTCATCTCGGGG+TGG - Chr1:87262742-87262761 None:intergenic 55.0%
! GTGAAGGACCTAAGAGGTGC+TGG + Chr1:87261689-87261708 MsG0180005117.01.T01:CDS 55.0%
! TTGGGAAGAGCATGTCCTGG+TGG + Chr1:87261233-87261252 MsG0180005117.01.T01:CDS 55.0%
! TTTTCATCTCGGGGTGGGAG+AGG - Chr1:87262736-87262755 None:intergenic 55.0%
!! GATGCACGGCTTGCTGCTAT+TGG + Chr1:87261206-87261225 MsG0180005117.01.T01:CDS 55.0%
!! TGCGGGAGCTTTAAGTGCAC+CGG - Chr1:87259335-87259354 None:intergenic 55.0%
AGGAAGCCGAGCTCTGCTTC+AGG - Chr1:87262862-87262881 None:intergenic 60.0%
AGGCGGTGGCCCTACATATC+TGG + Chr1:87262028-87262047 MsG0180005117.01.T01:CDS 60.0%
CAATACTGCCTCCACGGCCA+TGG - Chr1:87262004-87262023 None:intergenic 60.0%
CATGGCCGTGGAGGCAGTAT+TGG + Chr1:87262002-87262021 MsG0180005117.01.T01:CDS 60.0%
CCAACCACCTGGGTCTGTGA+TGG + Chr1:87262061-87262080 MsG0180005117.01.T01:CDS 60.0%
CCACAGCTCCCTCAACTTGC+TGG + Chr1:87258926-87258945 MsG0180005117.01.T01:CDS 60.0%
CCACCTGGGTCTGTGATGGT+AGG + Chr1:87262065-87262084 MsG0180005117.01.T01:intron 60.0%
CCATCACAGACCCAGGTGGT+TGG - Chr1:87262064-87262083 None:intergenic 60.0%
CCTACCATCACAGACCCAGG+TGG - Chr1:87262068-87262087 None:intergenic 60.0%
CTTAAAGCTCCCGCACACGC+AGG + Chr1:87259340-87259359 MsG0180005117.01.T01:intron 60.0%
TGTGCAGGGTGGAGTTTCCC+CGG + Chr1:87256262-87256281 MsG0180005117.01.T01:CDS 60.0%
! CCAGCAAGTTGAGGGAGCTG+TGG - Chr1:87258929-87258948 None:intergenic 60.0%
! TGGCCGCTTCACTGCTGCTT+GGG + Chr1:87261911-87261930 MsG0180005117.01.T01:CDS 60.0%
!! CGTGGAGGCAGTATTGGTCG+AGG + Chr1:87262008-87262027 MsG0180005117.01.T01:CDS 60.0%
!! CTTCCAGCTTGGCTCGGAGT+TGG + Chr1:87262981-87263000 MsG0180005117.01.T01:CDS 60.0%
!! GCGGGAGCTTTAAGTGCACC+GGG - Chr1:87259334-87259353 None:intergenic 60.0%
!! GGAGGCAGTATTGGTCGAGG+CGG + Chr1:87262011-87262030 MsG0180005117.01.T01:CDS 60.0%
CTGCTTCAGGCGTGGCTTCG+TGG - Chr1:87262849-87262868 None:intergenic 65.0%
CTGGCCGCTTCACTGCTGCT+TGG + Chr1:87261910-87261929 MsG0180005117.01.T01:CDS 65.0%
GCCACGCCTGAAGCAGAGCT+CGG + Chr1:87262853-87262872 MsG0180005117.01.T01:CDS 65.0%
GCTCCAACTCCGAGCCAAGC+TGG - Chr1:87262987-87263006 None:intergenic 65.0%
GGGTGGGAGAGGTGGACGAA+GGG - Chr1:87262725-87262744 None:intergenic 65.0%
TCATCTCGGGGTGGGAGAGG+TGG - Chr1:87262733-87262752 None:intergenic 65.0%
! GGGTCTGGGGTGCTAGCTGA+TGG + Chr1:87259803-87259822 MsG0180005117.01.T01:CDS 65.0%
!! GCTTGGCTCGGAGTTGGAGC+AGG + Chr1:87262987-87263006 MsG0180005117.01.T01:CDS 65.0%
!! GGCAGTATTGGTCGAGGCGG+TGG + Chr1:87262014-87262033 MsG0180005117.01.T01:CDS 65.0%
CACACGCAGGGTCCGGGAAG+GGG + Chr1:87259353-87259372 MsG0180005117.01.T01:intron 70.0%
CTTCCCGGACCCTGCGTGTG+CGG - Chr1:87259353-87259372 None:intergenic 70.0%
GCACACGCAGGGTCCGGGAA+GGG + Chr1:87259352-87259371 MsG0180005117.01.T01:intron 70.0%
GCCGAGCTCTGCTTCAGGCG+TGG - Chr1:87262857-87262876 None:intergenic 70.0%
GGGGTGGGAGAGGTGGACGA+AGG - Chr1:87262726-87262745 None:intergenic 70.0%
TTCCCGGACCCTGCGTGTGC+GGG - Chr1:87259352-87259371 None:intergenic 70.0%
CGCACACGCAGGGTCCGGGA+AGG + Chr1:87259351-87259370 MsG0180005117.01.T01:intron 75.0%
CTCCCGCACACGCAGGGTCC+GGG + Chr1:87259347-87259366 MsG0180005117.01.T01:intron 75.0%
GCTCCCGCACACGCAGGGTC+CGG + Chr1:87259346-87259365 MsG0180005117.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 87255215 87263434 87255215 ID=MsG0180005117.01;Name=MsG0180005117.01
Chr1 mRNA 87255215 87263434 87255215 ID=MsG0180005117.01.T01;Parent=MsG0180005117.01;Name=MsG0180005117.01.T01;_AED=0.36;_eAED=0.36;_QI=44|0.84|0.8|1|1|1|20|0|931
Chr1 exon 87255215 87255414 87255215 ID=MsG0180005117.01.T01:exon:47549;Parent=MsG0180005117.01.T01
Chr1 exon 87255661 87255824 87255661 ID=MsG0180005117.01.T01:exon:47550;Parent=MsG0180005117.01.T01
Chr1 exon 87256199 87256301 87256199 ID=MsG0180005117.01.T01:exon:47551;Parent=MsG0180005117.01.T01
Chr1 exon 87256555 87256632 87256555 ID=MsG0180005117.01.T01:exon:47552;Parent=MsG0180005117.01.T01
Chr1 exon 87256743 87256811 87256743 ID=MsG0180005117.01.T01:exon:47553;Parent=MsG0180005117.01.T01
Chr1 exon 87256938 87257016 87256938 ID=MsG0180005117.01.T01:exon:47554;Parent=MsG0180005117.01.T01
Chr1 exon 87257136 87257212 87257136 ID=MsG0180005117.01.T01:exon:47555;Parent=MsG0180005117.01.T01
Chr1 exon 87257295 87257390 87257295 ID=MsG0180005117.01.T01:exon:47556;Parent=MsG0180005117.01.T01
Chr1 exon 87257659 87257797 87257659 ID=MsG0180005117.01.T01:exon:47557;Parent=MsG0180005117.01.T01
Chr1 exon 87258223 87258327 87258223 ID=MsG0180005117.01.T01:exon:47558;Parent=MsG0180005117.01.T01
Chr1 exon 87258897 87258991 87258897 ID=MsG0180005117.01.T01:exon:47559;Parent=MsG0180005117.01.T01
Chr1 exon 87259591 87259716 87259591 ID=MsG0180005117.01.T01:exon:47560;Parent=MsG0180005117.01.T01
Chr1 exon 87259794 87259895 87259794 ID=MsG0180005117.01.T01:exon:47561;Parent=MsG0180005117.01.T01
Chr1 exon 87259966 87260112 87259966 ID=MsG0180005117.01.T01:exon:47562;Parent=MsG0180005117.01.T01
Chr1 exon 87260970 87261068 87260970 ID=MsG0180005117.01.T01:exon:47563;Parent=MsG0180005117.01.T01
Chr1 exon 87261170 87261258 87261170 ID=MsG0180005117.01.T01:exon:47564;Parent=MsG0180005117.01.T01
Chr1 exon 87261661 87261787 87261661 ID=MsG0180005117.01.T01:exon:47565;Parent=MsG0180005117.01.T01
Chr1 exon 87261876 87262082 87261876 ID=MsG0180005117.01.T01:exon:47566;Parent=MsG0180005117.01.T01
Chr1 exon 87262613 87263008 87262613 ID=MsG0180005117.01.T01:exon:47567;Parent=MsG0180005117.01.T01
Chr1 exon 87263093 87263434 87263093 ID=MsG0180005117.01.T01:exon:47568;Parent=MsG0180005117.01.T01
Chr1 five_prime_UTR 87255215 87255258 87255215 ID=MsG0180005117.01.T01:five_prime_utr;Parent=MsG0180005117.01.T01
Chr1 CDS 87255259 87255414 87255259 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87255661 87255824 87255661 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87256199 87256301 87256199 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87256555 87256632 87256555 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87256743 87256811 87256743 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87256938 87257016 87256938 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87257136 87257212 87257136 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87257295 87257390 87257295 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87257659 87257797 87257659 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87258223 87258327 87258223 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87258897 87258991 87258897 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87259591 87259716 87259591 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87259794 87259895 87259794 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87259966 87260112 87259966 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87260970 87261068 87260970 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87261170 87261258 87261170 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87261661 87261787 87261661 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87261876 87262082 87261876 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87262613 87263008 87262613 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Chr1 CDS 87263093 87263434 87263093 ID=MsG0180005117.01.T01:cds;Parent=MsG0180005117.01.T01
Gene Sequence

>MsG0180005117.01.T01

ATGACAGACACTACAGATGATATTGCTGAAGAAATCTCGTTCCAGAGCTTCGATGATGATTGTAGGTTGCTTGGTAATCTTCTCAACGACATTCTTCACCGTGAAGTTGGTACCACCTTTGTTGACAAACTCGAAAGAATTCGTGTCCTTGCTCAAAGTGCATGTAATATGAGGCAAGCAGGTATAGTGAACATGGCTGAGTTACTTGAGAAGCAGTTAGCTTCAGAGTTGTCAAAGATGTCATTAGAAGAAGCTTTCACTCTTGCTCGTGCTTTCAGTCATTATCTTACTATGATGGGTATAGCTGAAACTCACCATAGGGTTCGTAAAGGAGGGAATATGGCACAAATTTCAAAATCTTGTGATGATGTGTTTAACCAGCTTGTGCAGGGTGGAGTTTCCCCGGATGATCTTTACAACACAGAGGTTGAGATTGTTCTTACAGCTCATCCCACACAAATTAATCGACGAACACTGCAATACAAACACATTCGGATTGCTCATCTTTTGGATTATAACGATCGACCTGATCTTAGCCCTGAAGATCGAGAAATGCTGATTGAGGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAGCTTAGGCGCCAAAAACCCACTCCAGTTGATGAAGCTAGAGCTGGTTTGAATATAGTGGAGCAGTCACTCTGGAAAGCTGTTCCTCATTATTTACGACGTGTCAGCAATGCTTTAAAGAAGCATACTGGAAAGCCACTTCCACTGACTTGCACTCCCATAAAGTTTGGAACTTGGATGGGAGGTGATAGAGATGGAAATCCAAACGTTACCGCAAAGGTCACAAAAGCTGTTTCACTTCTATCTAGATGGATGGCTATTGACCTCTATATTCGGGAAGTGGATAGCCTCAGATTTGAGCTATCTATGAATCGGTGCAGTGATACGTTGTCAAGACTAGCACATGAAATTCTAGAAGAAGCTAAAGACGAGAATCGCCATGAGAGTTGGAATCAGTCCACGAATAGAAGTCAGTCACTTCCAACACAGCTTCCAGCTAGAGCTCATTTACCCTCTTTTGCTGGAAAGTCCAGTTTTCAGAAGCTTTTAGAGCCACAGCTCCCTCAACTTGCTGGAATTGCTCCTTATAGAGTTGTCCTGGGAAATGTAAAGGATAAGCTTGAGAGAAGCCGTAGACGGTTAGAACTTCTTCTTGAGGATGTTGCATGTGACTATGATCCTTTGGATTATTATGAAACAGCTGACCAGCTTTTGGAACCTCTGCTCCTCTGTTATGAATCTCTGCAATCATGTGGGTCTGGGGTGCTAGCTGATGGTCGACTTGCTGATCTCATTCGTAGAGTTGCAACCTTTGGAATGGTTTTAATGAAGCTTGATTTACGCCAGGAATCTGGGAGACATGCTGAAACACTTGATGCAGTTACAACATATTTGGATATGGGTACTTATAGTGAATGGGATGAAGAAAAGAAATTGGACTTCTTAACAAGAGAGCTGAAAGGAAAGAGGCCACTAGTACCTGTTAGTATGGAGGTTCCTGCTGATGTTAAAGAAGTCTTGGATACATTCCGAATCGCTGCTGAACTAGGGAGCGATTTTCTAGGAGCCTATGTGATATCTATGGCCTCGAGTGCAAGTGATGTCCTTGCAGTAGAGCTTTTACAGAAGGATGCACGGCTTGCTGCTATTGGAGAATTGGGAAGAGCATGTCCTGGTGGAACGTTGCGGGTTGTCCCTCTATTTGAAACCGTGAAGGACCTAAGAGGTGCTGGTTCAGTTATCCGGAAACTTTTATCAATAGACTGGTACCGCGAGCACGTCATTAAGAACCACAATGGACATCAAGAGGTTATGGTTGGATATTCTGATTCTGGTAAAGATGCTGGCCGCTTCACTGCTGCTTGGGAACTTTACAAAGCTCAGGAGGATGTTGTAGCTGCTTGCAATGATTATGGTATTAAAGTTACACTATTCCATGGCCGTGGAGGCAGTATTGGTCGAGGCGGTGGCCCTACATATCTGGCTATTCAGTCCCAACCACCTGGGTCTGTGATGGGAACACTTCGGTCTACCGAGCAGGGAGAAATGGTAGAGGCTAAGTTTGGGTTGCCACAGATAGCTGTTAGACAACTTGAAATATACACAACTGCTGTATTACTTGCAACCCTTCGTCCACCTCTCCCACCCCGAGATGAAAATTGGCGTAGTCTCATGGAAGAAATCTCAGATATCAGCTGCAAGTGTTACCGCAATGTAGTCTACGAAAATCCAGAGTTCCTTTCTTACTTCCACGAAGCCACGCCTGAAGCAGAGCTCGGCTTCCTGAACATAGGTAGTCGCCCTGCAAGAAGGAAGAACACAAAGGGAATTGGAAACCTTCGTGCTATTCCCTGGGTATTTGCTTGGACTCAAACCAGATTGTTCTTCCAGCTTGGCTCGGAGTTGGAGCAGACCTTATTGAGATGGTTAGGGAAAGCAGACACTACTATAGCCAAGTACTATGATGAAGCCCTTGTGTCAGAGGAGAGGCAAGAACTCGGACGTGAGCTAAGAAACGAGCTCCTGACAGCTGAAAAGTTTGTGCTCGTGATTAGTGGGCACGAGAAACTTCAGCAGAATAATAGGAGCTTGAGGAGGTTGGTTGAGAATAGACTTCCATTTCTCAATCCCATGAACCTGTTGCAGGTGGAGATTCTGAAGAGGTTGAGGCGTGATGACGACAACCTTAAACTCAGAGATGCTTTGCTTATCACCGTAAATGGGATTGCTGCTGGGATGAGGAATACCGGTTAA
Protein sequence

>MsG0180005117.01.T01

MTDTTDDIAEEISFQSFDDDCRLLGNLLNDILHREVGTTFVDKLERIRVLAQSACNMRQAGIVNMAELLEKQLASELSKMSLEEAFTLARAFSHYLTMMGIAETHHRVRKGGNMAQISKSCDDVFNQLVQGGVSPDDLYNTEVEIVLTAHPTQINRRTLQYKHIRIAHLLDYNDRPDLSPEDREMLIEDLVREITSIWQTDELRRQKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIKFGTWMGGDRDGNPNVTAKVTKAVSLLSRWMAIDLYIREVDSLRFELSMNRCSDTLSRLAHEILEEAKDENRHESWNQSTNRSQSLPTQLPARAHLPSFAGKSSFQKLLEPQLPQLAGIAPYRVVLGNVKDKLERSRRRLELLLEDVACDYDPLDYYETADQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAETLDAVTTYLDMGTYSEWDEEKKLDFLTRELKGKRPLVPVSMEVPADVKEVLDTFRIAAELGSDFLGAYVISMASSASDVLAVELLQKDARLAAIGELGRACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYREHVIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNDYGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVEAKFGLPQIAVRQLEIYTTAVLLATLRPPLPPRDENWRSLMEEISDISCKCYRNVVYENPEFLSYFHEATPEAELGFLNIGSRPARRKNTKGIGNLRAIPWVFAWTQTRLFFQLGSELEQTLLRWLGKADTTIAKYYDEALVSEERQELGRELRNELLTAEKFVLVISGHEKLQQNNRSLRRLVENRLPFLNPMNLLQVEILKRLRRDDDNLKLRDALLITVNGIAAGMRNTG*