AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005218.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005218.01.T01 MTR_1g095165 97.639 466 8 1 1 466 1 463 0.0 939
MsG0180005218.01.T01 MTR_0368s0010 99.329 298 2 0 168 465 1 298 0.0 617
MsG0180005218.01.T01 MTR_2g029510 45.395 456 191 11 11 465 21 419 2.92e-125 371
MsG0180005218.01.T01 MTR_1g072190 40.323 372 175 7 74 442 29 356 7.68e-86 268
MsG0180005218.01.T01 MTR_7g094940 38.718 390 194 8 74 457 29 379 7.64e-84 263
MsG0180005218.01.T01 MTR_1g019940 28.537 410 252 15 75 461 21 412 4.43e-38 144
MsG0180005218.01.T01 MTR_1g019940 28.537 410 250 16 75 461 21 410 6.05e-37 140
MsG0180005218.01.T01 MTR_3g101410 29.921 381 224 15 94 451 39 399 3.74e-35 135
MsG0180005218.01.T01 MTR_3g101400 28.723 376 229 13 94 448 39 396 8.43e-35 134
MsG0180005218.01.T01 MTR_5g017670 30.000 360 209 14 75 413 16 353 9.96e-35 134
MsG0180005218.01.T01 MTR_5g017680 29.888 358 215 12 75 413 10 350 5.18e-34 132
MsG0180005218.01.T01 MTR_8g007090 29.563 389 236 12 75 448 32 397 1.05e-29 120
MsG0180005218.01.T01 MTR_8g007040 27.062 388 247 9 75 448 32 397 1.40e-29 120
MsG0180005218.01.T01 MTR_8g007095 29.262 393 232 14 75 448 32 397 5.20e-29 118
MsG0180005218.01.T01 MTR_8g007065 26.097 433 267 13 31 451 7 398 2.06e-27 114
MsG0180005218.01.T01 MTR_8g007140 30.233 387 221 17 75 448 33 383 6.80e-25 106
MsG0180005218.01.T01 MTR_8g007125 28.750 400 221 15 75 448 32 393 7.91e-22 97.8
MsG0180005218.01.T01 MTR_1g019940 26.909 275 172 11 210 461 25 293 1.58e-15 77.4
MsG0180005218.01.T02 MTR_1g095165 97.639 466 8 1 1 466 1 463 0.0 939
MsG0180005218.01.T02 MTR_0368s0010 99.329 298 2 0 168 465 1 298 0.0 617
MsG0180005218.01.T02 MTR_2g029510 45.395 456 191 11 11 465 21 419 2.92e-125 371
MsG0180005218.01.T02 MTR_1g072190 40.323 372 175 7 74 442 29 356 7.68e-86 268
MsG0180005218.01.T02 MTR_7g094940 38.718 390 194 8 74 457 29 379 7.64e-84 263
MsG0180005218.01.T02 MTR_1g019940 28.537 410 252 15 75 461 21 412 4.43e-38 144
MsG0180005218.01.T02 MTR_1g019940 28.537 410 250 16 75 461 21 410 6.05e-37 140
MsG0180005218.01.T02 MTR_3g101410 29.921 381 224 15 94 451 39 399 3.74e-35 135
MsG0180005218.01.T02 MTR_3g101400 28.723 376 229 13 94 448 39 396 8.43e-35 134
MsG0180005218.01.T02 MTR_5g017670 30.000 360 209 14 75 413 16 353 9.96e-35 134
MsG0180005218.01.T02 MTR_5g017680 29.888 358 215 12 75 413 10 350 5.18e-34 132
MsG0180005218.01.T02 MTR_8g007090 29.563 389 236 12 75 448 32 397 1.05e-29 120
MsG0180005218.01.T02 MTR_8g007040 27.062 388 247 9 75 448 32 397 1.40e-29 120
MsG0180005218.01.T02 MTR_8g007095 29.262 393 232 14 75 448 32 397 5.20e-29 118
MsG0180005218.01.T02 MTR_8g007065 26.097 433 267 13 31 451 7 398 2.06e-27 114
MsG0180005218.01.T02 MTR_8g007140 30.233 387 221 17 75 448 33 383 6.80e-25 106
MsG0180005218.01.T02 MTR_8g007125 28.750 400 221 15 75 448 32 393 7.91e-22 97.8
MsG0180005218.01.T02 MTR_1g019940 26.909 275 172 11 210 461 25 293 1.58e-15 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005218.01.T01 AT2G39220 68.996 458 125 5 8 461 37 481 0.0 642
MsG0180005218.01.T01 AT3G54950 68.928 457 109 5 8 464 48 471 0.0 639
MsG0180005218.01.T01 AT4G29800 63.557 461 150 4 17 464 53 508 0.0 572
MsG0180005218.01.T01 AT4G29800 63.420 462 150 5 17 464 53 509 0.0 567
MsG0180005218.01.T01 AT3G63200 42.276 369 176 5 74 442 29 360 5.46e-91 282
MsG0180005218.01.T01 AT4G37060 29.073 399 242 14 75 451 19 398 2.76e-37 141
MsG0180005218.01.T01 AT2G26560 31.392 395 237 14 75 451 19 397 7.30e-37 140
MsG0180005218.01.T01 AT4G37070 28.536 403 239 14 75 451 19 398 6.41e-36 137
MsG0180005218.01.T01 AT4G37070 28.841 371 218 12 75 420 19 368 3.48e-35 135
MsG0180005218.01.T01 AT4G37070 28.841 371 218 12 75 420 19 368 3.48e-35 135
MsG0180005218.01.T01 AT4G37060 27.273 429 242 15 75 451 19 429 1.25e-31 126
MsG0180005218.01.T01 AT4G37070 27.224 371 213 12 75 420 19 357 2.70e-29 118
MsG0180005218.01.T01 AT4G37050 28.642 405 244 17 75 451 35 422 1.32e-26 112
MsG0180005218.01.T01 AT5G43590 29.014 355 211 9 75 410 14 346 1.97e-26 110
MsG0180005218.01.T01 AT5G43590 29.014 355 211 9 75 410 81 413 3.59e-26 111
MsG0180005218.01.T02 AT2G39220 68.996 458 125 5 8 461 37 481 0.0 642
MsG0180005218.01.T02 AT3G54950 68.928 457 109 5 8 464 48 471 0.0 639
MsG0180005218.01.T02 AT4G29800 63.557 461 150 4 17 464 53 508 0.0 572
MsG0180005218.01.T02 AT4G29800 63.420 462 150 5 17 464 53 509 0.0 567
MsG0180005218.01.T02 AT3G63200 42.276 369 176 5 74 442 29 360 5.46e-91 282
MsG0180005218.01.T02 AT4G37060 29.073 399 242 14 75 451 19 398 2.76e-37 141
MsG0180005218.01.T02 AT2G26560 31.392 395 237 14 75 451 19 397 7.30e-37 140
MsG0180005218.01.T02 AT4G37070 28.536 403 239 14 75 451 19 398 6.41e-36 137
MsG0180005218.01.T02 AT4G37070 28.841 371 218 12 75 420 19 368 3.48e-35 135
MsG0180005218.01.T02 AT4G37070 28.841 371 218 12 75 420 19 368 3.48e-35 135
MsG0180005218.01.T02 AT4G37060 27.273 429 242 15 75 451 19 429 1.25e-31 126
MsG0180005218.01.T02 AT4G37070 27.224 371 213 12 75 420 19 357 2.70e-29 118
MsG0180005218.01.T02 AT4G37050 28.642 405 244 17 75 451 35 422 1.32e-26 112
MsG0180005218.01.T02 AT5G43590 29.014 355 211 9 75 410 14 346 1.97e-26 110
MsG0180005218.01.T02 AT5G43590 29.014 355 211 9 75 410 81 413 3.59e-26 111

Find 131 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAAGCAGCTGTTGTAATT+TGG 0.242495 1:+88707174 MsG0180005218.01.T01:five_prime_UTR
CAGGCCGTTGCTATGGCGTT+TGG 0.279175 1:+88708858 MsG0180005218.01.T01:CDS
CTTGAGAGCAAGTTTCTCTT+TGG 0.302392 1:+88707862 MsG0180005218.01.T01:CDS
ACGTATACTATTATATTATA+TGG 0.306952 1:+88707149 None:intergenic
CTATGGCGTTTGGGCATTGC+CGG 0.308860 1:+88708868 MsG0180005218.01.T01:CDS
AGCTTATCCGTTTCAATGCT+TGG 0.316802 1:-88707817 None:intergenic
GGAGCTAGCTTTGCTACTTT+CGG 0.323930 1:+88707253 MsG0180005218.01.T01:five_prime_UTR
TAGAGCAACTTCGGCTGAAC+CGG 0.359167 1:+88708542 MsG0180005218.01.T01:CDS
AGGGTAATAATTCTATTCTA+AGG 0.371139 1:-88707387 None:intergenic
TACTAATTATGTCCGTGTTC+AGG 0.380764 1:+88708893 MsG0180005218.01.T01:CDS
TTTGAAATATGAAATATATA+AGG 0.383056 1:-88707474 None:intergenic
AGAAAAGCAGAAAATAATAA+TGG 0.385664 1:+88707765 MsG0180005218.01.T01:exon
AGGCCGTTGCTATGGCGTTT+GGG 0.395216 1:+88708859 MsG0180005218.01.T01:CDS
TCAACATCAGGTATCTGCTT+AGG 0.397587 1:-88707910 None:intergenic
CTCCGCTGACCTTGTTGATC+AGG 0.405823 1:+88708839 MsG0180005218.01.T01:CDS
CTAGTTCTTTCGCTTGGAAC+CGG 0.412376 1:+88708723 MsG0180005218.01.T01:CDS
AAATTCTACCGTCAGGGAAC+AGG 0.418583 1:+88708255 MsG0180005218.01.T01:CDS
TTTGACGTGGCAGCCGGTGC+CGG 0.419564 1:+88708129 MsG0180005218.01.T01:CDS
GGAGAAGCAAAGAGTGGAGG+AGG 0.422020 1:-88707453 None:intergenic
GCCGTGGCGGCGACGGTTGG+TGG 0.422292 1:-88707943 None:intergenic
GCTTGGAACCGGTCAGTTGT+TGG 0.425684 1:+88708734 MsG0180005218.01.T01:CDS
TCCGTTCGTGCGAGGGGTGG+AGG 0.430043 1:+88708695 MsG0180005218.01.T01:CDS
GGAACAGGCAATGGAAGCTC+CGG 0.443643 1:+88708270 MsG0180005218.01.T01:CDS
GGCTGCCACGTCAAAATAAT+CGG 0.443651 1:-88708121 None:intergenic
GCTTTGCTACTTTCGGCAAA+AGG 0.444059 1:+88707260 MsG0180005218.01.T01:five_prime_UTR
TCAATAGACCGCATTTGAAC+CGG 0.444590 1:-88708576 None:intergenic
TCTGTTCGGTGCTTGTTTGT+TGG 0.446381 1:+88707208 MsG0180005218.01.T01:five_prime_UTR
GCTGAAAGACACTTTAAAAC+CGG 0.447229 1:+88708416 MsG0180005218.01.T01:CDS
GTTCAAATGCGGTCTATTGA+TGG 0.451860 1:+88708579 MsG0180005218.01.T01:CDS
TTCCGTCGAATCTGCGACGG+CGG 0.453716 1:+88708338 MsG0180005218.01.T01:CDS
AATGGAAGCTCCGGCGGGAG+AGG 0.454766 1:+88708279 MsG0180005218.01.T01:CDS
TGAACCGGGTTTACTTGAAC+CGG 0.456051 1:+88708557 MsG0180005218.01.T01:CDS
TTGAAATACGAGCCATTGGC+CGG 0.457567 1:-88708809 None:intergenic
GTGTCATCCGCCGAGAAAAT+CGG 0.458396 1:-88708204 None:intergenic
CTTCCCACGTTGATTCTTGA+CGG 0.463155 1:-88707983 None:intergenic
TCCGTCGAATCTGCGACGGC+GGG 0.463860 1:+88708339 MsG0180005218.01.T01:CDS
CAACATCAGGTATCTGCTTA+GGG 0.467164 1:-88707909 None:intergenic
ACATGTGCTTCATAATAAAC+AGG 0.468166 1:+88708668 MsG0180005218.01.T01:CDS
CGAGATGGAAGGCGAAGGAT+TGG 0.469895 1:+88708784 MsG0180005218.01.T01:CDS
ACCAAGTGTGTGGCGGTTGA+TGG 0.471814 1:+88708606 MsG0180005218.01.T01:CDS
GGGGAAGAAATTCTACCGTC+AGG 0.473318 1:+88708248 MsG0180005218.01.T01:CDS
TACCGTCAGGGAACAGGCAA+TGG 0.479650 1:+88708261 MsG0180005218.01.T01:CDS
CGAATCTGCGACGGCGGGGA+TGG 0.480183 1:+88708344 MsG0180005218.01.T01:CDS
ACAGGCAATGGAAGCTCCGG+CGG 0.482595 1:+88708273 MsG0180005218.01.T01:CDS
GTCAACGGCCGTGGCGGCGA+CGG 0.484836 1:-88707950 None:intergenic
GGATTTCTCAAGAGACTGTT+CGG 0.485627 1:+88708300 MsG0180005218.01.T01:CDS
GTGGCAGCCGGTGCCGGCGT+CGG 0.487538 1:+88708135 MsG0180005218.01.T01:CDS
CGCACCGGTAGGATTATTCA+TGG 0.488768 1:-88708637 None:intergenic
TGTGGCGGTTGATGGTGGTT+TGG 0.489151 1:+88708614 MsG0180005218.01.T01:CDS
TCATAGCACGGTATCAAAAC+CGG 0.489644 1:-88708435 None:intergenic
TGTTGATCAGGCCGTTGCTA+TGG 0.491992 1:+88708851 MsG0180005218.01.T01:CDS
AAGAAGATTATTATTGAATG+AGG 0.492160 1:+88707520 MsG0180005218.01.T01:five_prime_UTR
GAAGGATTGGGCCCGGCCAA+TGG 0.492348 1:+88708797 MsG0180005218.01.T01:CDS
ACGGCCGTGGCGGCGACGGT+TGG 0.499828 1:-88707946 None:intergenic
CTCAAGAGACTGTTCGGTAG+CGG 0.503155 1:+88708306 MsG0180005218.01.T01:CDS
TCCTCCACCCCTCGCACGAA+CGG 0.514409 1:-88708696 None:intergenic
AGGAGTTTCCGTTCGTGCGA+GGG 0.515075 1:+88708688 MsG0180005218.01.T01:CDS
CAGAGAGAAACTGAGTCAAA+AGG 0.515223 1:-88707351 None:intergenic
GAGAAAATTAACACAAGAGT+GGG 0.518824 1:+88707303 MsG0180005218.01.T01:five_prime_UTR
ACCACCAACCGTCGCCGCCA+CGG 0.521167 1:+88707942 MsG0180005218.01.T01:CDS
AGGTCAACTATGATTATGAT+CGG 0.522969 1:+88708757 MsG0180005218.01.T01:CDS
TTCTATAGGCGTCACTTCCG+AGG 0.524590 1:+88707695 MsG0180005218.01.T01:intron
GGAAACAGAGTCAACGGCCG+TGG 0.527447 1:-88707959 None:intergenic
AATACCTCCGACGCCGGCAC+CGG 0.530714 1:-88708142 None:intergenic
GGAAGGCGAAGGATTGGGCC+CGG 0.531527 1:+88708790 MsG0180005218.01.T01:CDS
GAGAAGCAAAGAGTGGAGGA+GGG 0.532846 1:-88707452 None:intergenic
GCAAGAACCAAGCATTGAAA+CGG 0.533106 1:+88707810 MsG0180005218.01.T01:CDS
GCTACGATGATCAAAAGCTC+TGG 0.535567 1:+88707884 MsG0180005218.01.T01:CDS
GGTTGTTGAGAATCAACATC+AGG 0.536613 1:-88707922 None:intergenic
TTCCATTGCCTGTTCCCTGA+CGG 0.537005 1:-88708263 None:intergenic
CCCCGCCGTCGCAGATTCGA+CGG 0.537842 1:-88708340 None:intergenic
GAGATGGAAGGCGAAGGATT+GGG 0.539639 1:+88708785 MsG0180005218.01.T01:CDS
TCACTTGAAATACGAGCCAT+TGG 0.542079 1:-88708813 None:intergenic
ACCATCAACCGCCACACACT+TGG 0.543430 1:-88708607 None:intergenic
CGTGAAAATACCTCCGACGC+CGG 0.544652 1:-88708148 None:intergenic
GATTTGCTAGTTCTTTCGCT+TGG 0.545085 1:+88708717 MsG0180005218.01.T01:CDS
ATATAAGGAGAAGCAAAGAG+TGG 0.546945 1:-88707459 None:intergenic
GACGGCGGGGATGGAGAAAA+CGG 0.553646 1:+88708353 MsG0180005218.01.T01:CDS
GCAGCCGGTGCCGGCGTCGG+AGG 0.554285 1:+88708138 MsG0180005218.01.T01:CDS
CACATGTGTAATCGCCGCAC+CGG 0.555745 1:-88708652 None:intergenic
GTTTCCGTTCGTGCGAGGGG+TGG 0.558566 1:+88708692 MsG0180005218.01.T01:CDS
TGAAATACGAGCCATTGGCC+GGG 0.563766 1:-88708808 None:intergenic
CAGGCAATGGAAGCTCCGGC+GGG 0.564349 1:+88708274 MsG0180005218.01.T01:CDS
CAGGAGTTTCCGTTCGTGCG+AGG 0.565614 1:+88708687 MsG0180005218.01.T01:CDS
GGAGTTTCCGTTCGTGCGAG+GGG 0.566638 1:+88708689 MsG0180005218.01.T01:CDS
AGAGCAACTTCGGCTGAACC+GGG 0.567221 1:+88708543 MsG0180005218.01.T01:CDS
ATGCCCAAACGCCATAGCAA+CGG 0.571854 1:-88708862 None:intergenic
GGTCAACTATGATTATGATC+GGG 0.574808 1:+88708758 MsG0180005218.01.T01:CDS
GGAGGTGTGTAGAGCAACTT+CGG 0.577605 1:+88708533 MsG0180005218.01.T01:CDS
AGAGAAAATTAACACAAGAG+TGG 0.579080 1:+88707302 MsG0180005218.01.T01:five_prime_UTR
TGTGTAATCGCCGCACCGGT+AGG 0.579559 1:-88708648 None:intergenic
TGGAACCGGTCAGTTGTTGG+AGG 0.586781 1:+88708737 MsG0180005218.01.T01:CDS
ATTATGATCGGGTTACGAGA+TGG 0.589388 1:+88708769 MsG0180005218.01.T01:CDS
CACGGACATAATTAGTACTC+CGG 0.593724 1:-88708887 None:intergenic
GGGTAATAATTCTATTCTAA+GGG 0.597458 1:-88707386 None:intergenic
ACGTGCGGATGCTTTAGAAA+CGG 0.601408 1:+88708488 MsG0180005218.01.T01:CDS
TACTTGAACCGGTTCAAATG+CGG 0.602507 1:+88708568 MsG0180005218.01.T01:CDS
TAAGGAGAAGCAAAGAGTGG+AGG 0.602874 1:-88707456 None:intergenic
GTTGACCTCCAACAACTGAC+CGG 0.609502 1:-88708742 None:intergenic
CTTGAGAAATCCTCTCCCGC+CGG 0.609642 1:-88708289 None:intergenic
CTGATCAACAAGGTCAGCGG+AGG 0.610850 1:-88708838 None:intergenic
TGATGTTTACATAGATAGAG+AGG 0.611209 1:+88707232 MsG0180005218.01.T01:five_prime_UTR
TTGGCCATGAATAATCCTAC+CGG 0.612580 1:+88708633 MsG0180005218.01.T01:CDS
TGAACCGGTTCAAGTAAACC+CGG 0.613116 1:-88708561 None:intergenic
AAGAGACTGTTCGGTAGCGG+AGG 0.614347 1:+88708309 MsG0180005218.01.T01:CDS
AACAGAGTCAACGGCCGTGG+CGG 0.614880 1:-88707956 None:intergenic
GAGTTCCGTCGAATCTGCGA+CGG 0.615964 1:+88708335 MsG0180005218.01.T01:CDS
GACGGCGGAAACAGAGTCAA+CGG 0.623711 1:-88707965 None:intergenic
AAGTGTGTGGCGGTTGATGG+TGG 0.623727 1:+88708609 MsG0180005218.01.T01:CDS
GGGAAGAAATTCTACCGTCA+GGG 0.626899 1:+88708249 MsG0180005218.01.T01:CDS
GTGCTATGATTTATCCAGTA+CGG 0.631624 1:+88708449 MsG0180005218.01.T01:CDS
GGTATGCGAGGCATTCTCGC+CGG 0.639751 1:+88708033 MsG0180005218.01.T01:CDS
TGATCGGGTTACGAGATGGA+AGG 0.648112 1:+88708773 MsG0180005218.01.T01:CDS
ATACTCACAATCGACGGAGG+AGG 0.648993 1:+88708012 MsG0180005218.01.T01:CDS
ATCGACGGAGGAGGTATGCG+AGG 0.650228 1:+88708021 MsG0180005218.01.T01:CDS
GGCCTGATCAACAAGGTCAG+CGG 0.653320 1:-88708841 None:intergenic
TAGCAACGGCCTGATCAACA+AGG 0.664417 1:-88708848 None:intergenic
CCGTCGAATCTGCGACGGCG+GGG 0.668981 1:+88708340 MsG0180005218.01.T01:CDS
CCCACGTTGATTCTTGACGG+CGG 0.670164 1:-88707980 None:intergenic
GGTTACGAGATGGAAGGCGA+AGG 0.671448 1:+88708779 MsG0180005218.01.T01:CDS
ATATGTATACTCACAATCGA+CGG 0.672325 1:+88708006 MsG0180005218.01.T01:CDS
TGTTTGCTACAAAAGATGAA+CGG 0.675721 1:+88708178 MsG0180005218.01.T01:CDS
TTGATGAACATACCTGAACA+CGG 0.698028 1:-88708905 None:intergenic
TGGTGTAACCAAGTGTGTGG+CGG 0.702857 1:+88708599 MsG0180005218.01.T01:CDS
TGATGGTGTAACCAAGTGTG+TGG 0.703336 1:+88708596 MsG0180005218.01.T01:CDS
CATGAATAATCCTACCGGTG+CGG 0.712541 1:+88708638 MsG0180005218.01.T01:CDS
GTACTGGATAAATCATAGCA+CGG 0.718842 1:-88708447 None:intergenic
TGTATACTCACAATCGACGG+AGG 0.721634 1:+88708009 MsG0180005218.01.T01:CDS
CCGCCGTCAAGAATCAACGT+GGG 0.730624 1:+88707980 MsG0180005218.01.T01:CDS
TCTCGGCGGATGACACGTGG+CGG 0.736625 1:+88708211 MsG0180005218.01.T01:CDS
TCCGCCGTCAAGAATCAACG+TGG 0.746396 1:+88707979 MsG0180005218.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAGAATTACTATATAAAA+TGG + Chr1:88710723-88710742 MsG0180005218.01.T01:intron 10.0%
!!! ATTTAATTTACAATATTGTT+TGG + Chr1:88708942-88708961 MsG0180005218.01.T01:intron 10.0%
!!! ATTTTTTTTTTAATTTGGAA+TGG + Chr1:88707548-88707567 MsG0180005218.01.T01:intron 10.0%
!!! GTTTTTTTATTTTGAAATTA+CGG + Chr1:88711030-88711049 MsG0180005218.01.T01:intron 10.0%
!!! TCATTTTTTTTCTTTTAATT+TGG + Chr1:88711627-88711646 MsG0180005218.01.T01:intron 10.0%
!!! TTTGAAATATGAAATATATA+AGG - Chr1:88707477-88707496 None:intergenic 10.0%
!!! TTTTTTTATTTTGAAATTAC+GGG + Chr1:88711031-88711050 MsG0180005218.01.T01:intron 10.0%
!! AAATAAAAAAACAAACAAAC+CGG - Chr1:88711022-88711041 None:intergenic 15.0%
!! AATTACTATATAAAATGGTT+AGG + Chr1:88710728-88710747 MsG0180005218.01.T01:intron 15.0%
!! AGAAAAAAAATGATAAGATT+TGG - Chr1:88711620-88711639 None:intergenic 15.0%
!! TGACTAAATAATGTAAATTT+GGG + Chr1:88711387-88711406 MsG0180005218.01.T01:intron 15.0%
!! TTGACTAAATAATGTAAATT+TGG + Chr1:88711386-88711405 MsG0180005218.01.T01:intron 15.0%
!!! TTTTTGTTAATTTACCAAAA+AGG - Chr1:88709601-88709620 None:intergenic 15.0%
!! AAAAAAGAATGAAAATTCAG+AGG + Chr1:88712112-88712131 MsG0180005218.01.T01:three_prime_UTR 20.0%
!! AAAAAGAATGAAAATTCAGA+GGG + Chr1:88712113-88712132 MsG0180005218.01.T01:three_prime_UTR 20.0%
!! AACTATTGAAGTAATTATTG+GGG - Chr1:88709542-88709561 None:intergenic 20.0%
!! AAGAAGATTATTATTGAATG+AGG + Chr1:88707520-88707539 MsG0180005218.01.T01:five_prime_UTR 20.0%
!! ACTTGAATTTCTAATTGTTT+GGG + Chr1:88711125-88711144 MsG0180005218.01.T01:intron 20.0%
!! AGAAAAGCAGAAAATAATAA+TGG + Chr1:88707765-88707784 MsG0180005218.01.T01:exon 20.0%
!! ATAATATTTCATTTCGTGAA+TGG + Chr1:88711675-88711694 MsG0180005218.01.T01:intron 20.0%
!! CAACTATTGAAGTAATTATT+GGG - Chr1:88709543-88709562 None:intergenic 20.0%
!! GTTGAATTGATAAAAGTTAA+GGG + Chr1:88709145-88709164 MsG0180005218.01.T01:intron 20.0%
!! TACGGAGTTAAAAAAAATAA+GGG + Chr1:88709016-88709035 MsG0180005218.01.T01:intron 20.0%
!! TACTTGAATTTCTAATTGTT+TGG + Chr1:88711124-88711143 MsG0180005218.01.T01:intron 20.0%
!! TATTATAAATTTCAAGAGCA+AGG - Chr1:88711661-88711680 None:intergenic 20.0%
!! TATTTGGTTACATATTTCTT+TGG + Chr1:88711216-88711235 MsG0180005218.01.T01:intron 20.0%
!! TCAACTATTGAAGTAATTAT+TGG - Chr1:88709544-88709563 None:intergenic 20.0%
!! TCATAAATAAAATCAGATCA+TGG + Chr1:88710927-88710946 MsG0180005218.01.T01:intron 20.0%
!! TGGTAAATATACTATATGTT+TGG - Chr1:88711580-88711599 None:intergenic 20.0%
!! TGTTGAATTGATAAAAGTTA+AGG + Chr1:88709144-88709163 MsG0180005218.01.T01:intron 20.0%
!! TTGAATTGATAAAAGTTAAG+GGG + Chr1:88709146-88709165 MsG0180005218.01.T01:intron 20.0%
!!! ATAGTTTTGATTTTCGTTTA+TGG + Chr1:88708511-88708530 MsG0180005218.01.T01:CDS 20.0%
!!! ATATTTCTGTCTTGTTTTTT+TGG - Chr1:88711544-88711563 None:intergenic 20.0%
!!! CAATTTTAGGAAATTTTTGT+TGG + Chr1:88709368-88709387 MsG0180005218.01.T01:intron 20.0%
!!! GAATTCTATTTATTTTGCAA+AGG + Chr1:88711422-88711441 MsG0180005218.01.T01:intron 20.0%
!!! TACATTTTAGTATAGTTACA+TGG + Chr1:88709087-88709106 MsG0180005218.01.T01:intron 20.0%
!!! TAGTTTTGATTTTCGTTTAT+GGG + Chr1:88708512-88708531 MsG0180005218.01.T01:CDS 20.0%
!!! TCTTCTTATCTTTTTTCTAT+AGG + Chr1:88707681-88707700 MsG0180005218.01.T01:intron 20.0%
!!! TCTTTTTAGCTCTTTTTATT+TGG - Chr1:88707625-88707644 None:intergenic 20.0%
! AAAATTGAAACACATTCTTC+TGG - Chr1:88709355-88709374 None:intergenic 25.0%
! AAAGCAAAAAAAGAACAAGA+TGG + Chr1:88711798-88711817 MsG0180005218.01.T01:three_prime_UTR 25.0%
! ACAAGTGGTGTAATTAAAAA+GGG + Chr1:88711923-88711942 MsG0180005218.01.T01:three_prime_UTR 25.0%
! AGGGTAATAATTCTATTCTA+AGG - Chr1:88707390-88707409 None:intergenic 25.0%
! CATGTAATAAAATGTTTGCA+GGG + Chr1:88711730-88711749 MsG0180005218.01.T01:intron 25.0%
! CGAGATTATTGAATTTCATT+TGG + Chr1:88709515-88709534 MsG0180005218.01.T01:intron 25.0%
! CTTGAATTTCTAATTGTTTG+GGG + Chr1:88711126-88711145 MsG0180005218.01.T01:intron 25.0%
! GAAACTAATTACCAAAACTA+TGG - Chr1:88709395-88709414 None:intergenic 25.0%
! GGGTAATAATTCTATTCTAA+GGG - Chr1:88707389-88707408 None:intergenic 25.0%
! GTAACCAAATATATACTTGA+AGG - Chr1:88711207-88711226 None:intergenic 25.0%
! GTACGGAGTTAAAAAAAATA+AGG + Chr1:88709015-88709034 MsG0180005218.01.T01:intron 25.0%
! GTGATCTTTATTGTACAAAA+AGG + Chr1:88711081-88711100 MsG0180005218.01.T01:intron 25.0%
! TAAAGACATCCACAAATTAA+GGG - Chr1:88710549-88710568 None:intergenic 25.0%
! TAAATAAAATCAGATCATGG+AGG + Chr1:88710930-88710949 MsG0180005218.01.T01:intron 25.0%
! TAATACTAACAAATGAGTGT+CGG - Chr1:88710820-88710839 None:intergenic 25.0%
! TGTCATAATAAAGTTATTGC+CGG + Chr1:88711000-88711019 MsG0180005218.01.T01:intron 25.0%
! TTAAAGACATCCACAAATTA+AGG - Chr1:88710550-88710569 None:intergenic 25.0%
! TTGAATTTCTAATTGTTTGG+GGG + Chr1:88711127-88711146 MsG0180005218.01.T01:intron 25.0%
! TTTGATTGAGAAAAACAACA+AGG - Chr1:88711707-88711726 None:intergenic 25.0%
!! ATCTAGTTCAAAATAGGAAA+AGG + Chr1:88710859-88710878 MsG0180005218.01.T01:intron 25.0%
!! ATTAGTTTCATTATAGCATG+TGG + Chr1:88709406-88709425 MsG0180005218.01.T01:intron 25.0%
!! ATTGTTGTTACATACTTACA+TGG + Chr1:88710757-88710776 MsG0180005218.01.T01:intron 25.0%
!! ATTTTAGATTACAAAAGGGT+GGG + Chr1:88707326-88707345 MsG0180005218.01.T01:five_prime_UTR 25.0%
!! CATTTGTTAGTATTAGGAAA+GGG + Chr1:88710825-88710844 MsG0180005218.01.T01:intron 25.0%
!! CTTGGTAATTTATTACTCAA+GGG - Chr1:88710185-88710204 None:intergenic 25.0%
!! GAAGAATGTGTTTCAATTTT+AGG + Chr1:88709355-88709374 MsG0180005218.01.T01:intron 25.0%
!! TAGTCAATCTAGTTCAAAAT+AGG + Chr1:88710853-88710872 MsG0180005218.01.T01:intron 25.0%
!! TCATTTGTTAGTATTAGGAA+AGG + Chr1:88710824-88710843 MsG0180005218.01.T01:intron 25.0%
!! TCTAGTTCAAAATAGGAAAA+GGG + Chr1:88710860-88710879 MsG0180005218.01.T01:intron 25.0%
!! TGGGATTTTAGATTACAAAA+GGG + Chr1:88707322-88707341 MsG0180005218.01.T01:five_prime_UTR 25.0%
!! TTGGTAATTTATTACTCAAG+GGG - Chr1:88710184-88710203 None:intergenic 25.0%
!! TTTGTATATAGCAAGTTGAA+GGG + Chr1:88709251-88709270 MsG0180005218.01.T01:intron 25.0%
!!! ATTTTCATGATTTTGAGTAG+TGG + Chr1:88711314-88711333 MsG0180005218.01.T01:intron 25.0%
!!! ATTTTTTTTAACTCCGTACT+AGG - Chr1:88709014-88709033 None:intergenic 25.0%
!!! CTTAATTTTGATCCTAAAGA+CGG - Chr1:88709487-88709506 None:intergenic 25.0%
!!! GGTCTTTGGTAATTTTTAAT+GGG + Chr1:88710508-88710527 MsG0180005218.01.T01:intron 25.0%
!!! GTTAAGAGGGTATTTTATTT+TGG + Chr1:88710904-88710923 MsG0180005218.01.T01:intron 25.0%
!!! TACACTTTGTTTTTCTTTCT+TGG - Chr1:88712036-88712055 None:intergenic 25.0%
!!! TCATATTTCAAAGTGTTTTC+TGG + Chr1:88707485-88707504 MsG0180005218.01.T01:five_prime_UTR 25.0%
!!! TGTGTTCTAAAATACCTTTT+TGG + Chr1:88709584-88709603 MsG0180005218.01.T01:intron 25.0%
!!! TTTGGTAATTTTTAATGGGT+GGG + Chr1:88710512-88710531 MsG0180005218.01.T01:intron 25.0%
!!! TTTTTTTTAACTCCGTACTA+GGG - Chr1:88709013-88709032 None:intergenic 25.0%
AAATAAAGATGCTTTCACCT+TGG - Chr1:88710203-88710222 None:intergenic 30.0%
AATAAAATGTTTGCAGGGAA+TGG + Chr1:88711735-88711754 MsG0180005218.01.T01:intron 30.0%
AATGCGTTGAAGAAAAAATC+CGG + Chr1:88708078-88708097 MsG0180005218.01.T01:CDS 30.0%
ACAAAAAGCCTAATCTGAAT+TGG + Chr1:88709614-88709633 MsG0180005218.01.T01:intron 30.0%
ACAGTGAAAAACTAATTGTG+AGG - Chr1:88707410-88707429 None:intergenic 30.0%
ACATGTGCTTCATAATAAAC+AGG + Chr1:88708668-88708687 MsG0180005218.01.T01:CDS 30.0%
ACCAAATATATACTTGAAGG+AGG - Chr1:88711204-88711223 None:intergenic 30.0%
AGAGAAAATTAACACAAGAG+TGG + Chr1:88707302-88707321 MsG0180005218.01.T01:five_prime_UTR 30.0%
AGGTCAACTATGATTATGAT+CGG + Chr1:88708757-88708776 MsG0180005218.01.T01:CDS 30.0%
AGTTTAGAGGTGAAAACAAT+AGG - Chr1:88710417-88710436 None:intergenic 30.0%
ATAATGTAAATTTGGGCAGT+TGG + Chr1:88711394-88711413 MsG0180005218.01.T01:intron 30.0%
ATATGTATACTCACAATCGA+CGG + Chr1:88708006-88708025 MsG0180005218.01.T01:CDS 30.0%
ATTACTATGATGAATCTGTG+TGG - Chr1:88710584-88710603 None:intergenic 30.0%
ATTGTTATCTGAGTAGTACT+TGG - Chr1:88710333-88710352 None:intergenic 30.0%
CAAAACAAAAAGTAATGTCG+CGG + Chr1:88711507-88711526 MsG0180005218.01.T01:intron 30.0%
CAGTGAAAAACTAATTGTGA+GGG - Chr1:88707409-88707428 None:intergenic 30.0%
CCATGTAATAAAATGTTTGC+AGG + Chr1:88711729-88711748 MsG0180005218.01.T01:intron 30.0%
CCTTGAGTAATAAATTACCA+AGG + Chr1:88710183-88710202 MsG0180005218.01.T01:intron 30.0%
GACAAGTGGTGTAATTAAAA+AGG + Chr1:88711922-88711941 MsG0180005218.01.T01:three_prime_UTR 30.0%
GAGAAAATTAACACAAGAGT+GGG + Chr1:88707303-88707322 MsG0180005218.01.T01:five_prime_UTR 30.0%
GGCATAAATAATTTCCATCT+TGG - Chr1:88711254-88711273 None:intergenic 30.0%
TACAATTCTTTGCTAGTGAA+TGG - Chr1:88710628-88710647 None:intergenic 30.0%
TAGAACCAACCTAAACAAAA+CGG + Chr1:88710084-88710103 MsG0180005218.01.T01:three_prime_UTR 30.0%
TCCTCCTTCAAGTATATATT+TGG + Chr1:88711200-88711219 MsG0180005218.01.T01:intron 30.0%
TGAGAGAACATAAGTTATGT+CGG + Chr1:88710790-88710809 MsG0180005218.01.T01:intron 30.0%
TGATGTTTACATAGATAGAG+AGG + Chr1:88707232-88707251 MsG0180005218.01.T01:five_prime_UTR 30.0%
TTCAAAATAGGAAAAGGGTA+GGG + Chr1:88710865-88710884 MsG0180005218.01.T01:intron 30.0%
TTGCAAAGGAATGATGATAT+GGG + Chr1:88711436-88711455 MsG0180005218.01.T01:intron 30.0%
TTTGCAAAGGAATGATGATA+TGG + Chr1:88711435-88711454 MsG0180005218.01.T01:intron 30.0%
! ACTACTAGTTGAAGCTTTTT+AGG + Chr1:88712055-88712074 MsG0180005218.01.T01:three_prime_UTR 30.0%
! CCTGCAAACATTTTATTACA+TGG - Chr1:88711732-88711751 None:intergenic 30.0%
! CCTTGGTAATTTATTACTCA+AGG - Chr1:88710186-88710205 None:intergenic 30.0%
! CTACTAGTTGAAGCTTTTTA+GGG + Chr1:88712056-88712075 MsG0180005218.01.T01:three_prime_UTR 30.0%
! CTTTCAAACAAAGCTTTTCA+GGG + Chr1:88710156-88710175 MsG0180005218.01.T01:intron 30.0%
! GACACTCATTTGTTAGTATT+AGG + Chr1:88710819-88710838 MsG0180005218.01.T01:intron 30.0%
! GATTTGGTACAATCAAATTG+TGG - Chr1:88711604-88711623 None:intergenic 30.0%
! GATTTTAGATTACAAAAGGG+TGG + Chr1:88707325-88707344 MsG0180005218.01.T01:five_prime_UTR 30.0%
! GTGGGATTTTAGATTACAAA+AGG + Chr1:88707321-88707340 MsG0180005218.01.T01:five_prime_UTR 30.0%
! GTTTGTATATAGCAAGTTGA+AGG + Chr1:88709250-88709269 MsG0180005218.01.T01:intron 30.0%
! TAATCAACACCCTTAATTTG+TGG + Chr1:88710537-88710556 MsG0180005218.01.T01:intron 30.0%
! TCTATATTGTACTGATGATG+AGG - Chr1:88710709-88710728 None:intergenic 30.0%
! TGTTGTAATTTGGCATTTTC+TGG + Chr1:88707184-88707203 MsG0180005218.01.T01:five_prime_UTR 30.0%
! TGTTTGCTACAAAAGATGAA+CGG + Chr1:88708178-88708197 MsG0180005218.01.T01:CDS 30.0%
! TTACCTTTGAAGATAGACAA+GGG + Chr1:88711878-88711897 MsG0180005218.01.T01:three_prime_UTR 30.0%
! TTTACCTTTGAAGATAGACA+AGG + Chr1:88711877-88711896 MsG0180005218.01.T01:three_prime_UTR 30.0%
! TTTCAAACAAAGCTTTTCAG+GGG + Chr1:88710157-88710176 MsG0180005218.01.T01:intron 30.0%
! TTTTTGTTGGTCCATAGTTT+TGG + Chr1:88709381-88709400 MsG0180005218.01.T01:intron 30.0%
!! CAACTTGCTATATACAAACA+AGG - Chr1:88709249-88709268 None:intergenic 30.0%
!! CGGTCTTTGGTAATTTTTAA+TGG + Chr1:88710507-88710526 MsG0180005218.01.T01:intron 30.0%
!! CTTTGGTAATTTTTAATGGG+TGG + Chr1:88710511-88710530 MsG0180005218.01.T01:intron 30.0%
!! GTACAAAAAGGTATTTCTGA+GGG + Chr1:88711093-88711112 MsG0180005218.01.T01:intron 30.0%
!! TGTACAAAAAGGTATTTCTG+AGG + Chr1:88711092-88711111 MsG0180005218.01.T01:intron 30.0%
!! TTGGTAATTTTTAATGGGTG+GGG + Chr1:88710513-88710532 MsG0180005218.01.T01:intron 30.0%
!!! TATTTTGAAATTACGGGTTG+TGG + Chr1:88711037-88711056 MsG0180005218.01.T01:intron 30.0%
!!! TTTTGATTTTCGTTTATGGG+AGG + Chr1:88708515-88708534 MsG0180005218.01.T01:CDS 30.0%
AAAAGCCTAATCTGAATTGG+TGG + Chr1:88709617-88709636 MsG0180005218.01.T01:intron 35.0%
AAAGCCTAATCTGAATTGGT+GGG + Chr1:88709618-88709637 MsG0180005218.01.T01:intron 35.0%
AACAAGATGGAGAAAGTGAA+AGG + Chr1:88711811-88711830 MsG0180005218.01.T01:three_prime_UTR 35.0%
AAGAATGAAAATTCAGAGGG+TGG + Chr1:88712116-88712135 MsG0180005218.01.T01:three_prime_UTR 35.0%
AATGGTCAAAAAATGTTGCC+GGG + Chr1:88711753-88711772 MsG0180005218.01.T01:three_prime_UTR 35.0%
AATTTCAAGAGCAAGGACTA+AGG - Chr1:88711654-88711673 None:intergenic 35.0%
ACTACGGAAAAAACTTTGGA+GGG - Chr1:88710961-88710980 None:intergenic 35.0%
AGCAATGTAAAGATGCTGAT+GGG + Chr1:88709849-88709868 MsG0180005218.01.T01:CDS 35.0%
AGTGGTGTAATTAAAAAGGG+TGG + Chr1:88711926-88711945 MsG0180005218.01.T01:three_prime_UTR 35.0%
AGTGTGTTCGAATAGTTTAG+AGG - Chr1:88710430-88710449 None:intergenic 35.0%
ATATAAGGAGAAGCAAAGAG+TGG - Chr1:88707462-88707481 None:intergenic 35.0%
ATCAGCATCTTTACATTGCT+GGG - Chr1:88709849-88709868 None:intergenic 35.0%
ATGTTAAGTGTGTTGAGAGA+TGG + Chr1:88709064-88709083 MsG0180005218.01.T01:intron 35.0%
CACAAAGAACCCAATAAGAA+CGG - Chr1:88711161-88711180 None:intergenic 35.0%
CAGCTAAATAAACACAAGCA+CGG + Chr1:88710487-88710506 MsG0180005218.01.T01:intron 35.0%
GAACTTGGAAGATGTTAAGA+GGG + Chr1:88710891-88710910 MsG0180005218.01.T01:intron 35.0%
GAATGGTCAAAAAATGTTGC+CGG + Chr1:88711752-88711771 MsG0180005218.01.T01:three_prime_UTR 35.0%
GAGAATAATGAGGTGTAAAC+AGG + Chr1:88709118-88709137 MsG0180005218.01.T01:intron 35.0%
GAGAGAACATAAGTTATGTC+GGG + Chr1:88710791-88710810 MsG0180005218.01.T01:intron 35.0%
GATCAATTCATGCTTAGTTC+AGG - Chr1:88709701-88709720 None:intergenic 35.0%
GGTCAACTATGATTATGATC+GGG + Chr1:88708758-88708777 MsG0180005218.01.T01:CDS 35.0%
GGTTGAGTTTGAGAATAATG+AGG + Chr1:88709108-88709127 MsG0180005218.01.T01:intron 35.0%
GTAACTTTCAGAAGCTTGAT+TGG + Chr1:88709946-88709965 MsG0180005218.01.T01:CDS 35.0%
GTACTGGATAAATCATAGCA+CGG - Chr1:88708450-88708469 None:intergenic 35.0%
GTGCTATGATTTATCCAGTA+CGG + Chr1:88708449-88708468 MsG0180005218.01.T01:CDS 35.0%
GTGGTGTAATTAAAAAGGGT+GGG + Chr1:88711927-88711946 MsG0180005218.01.T01:three_prime_UTR 35.0%
GTTCAAAATAGGAAAAGGGT+AGG + Chr1:88710864-88710883 MsG0180005218.01.T01:intron 35.0%
TAAATTTGGGCAGTTGGATA+TGG + Chr1:88711400-88711419 MsG0180005218.01.T01:intron 35.0%
TAACCCTTGTCTATCTTCAA+AGG - Chr1:88711884-88711903 None:intergenic 35.0%
TAATAGCTAGAAAGATGGAG+TGG - Chr1:88712002-88712021 None:intergenic 35.0%
TACATACTTACATGGTCGTA+TGG + Chr1:88710765-88710784 MsG0180005218.01.T01:intron 35.0%
TACCCTAATAGCTAGAAAGA+TGG - Chr1:88712007-88712026 None:intergenic 35.0%
TACTAATTATGTCCGTGTTC+AGG + Chr1:88708893-88708912 MsG0180005218.01.T01:CDS 35.0%
TAGTGGTCCTAATATGCTAT+TGG + Chr1:88711331-88711350 MsG0180005218.01.T01:intron 35.0%
TATGTTTGTTTGCCGTCTTT+AGG + Chr1:88709472-88709491 MsG0180005218.01.T01:intron 35.0%
TCAGAAGTCATCTATGCAAA+GGG - Chr1:88711275-88711294 None:intergenic 35.0%
TCTGTAGAAACTCTGTTGAT+GGG + Chr1:88710369-88710388 MsG0180005218.01.T01:intron 35.0%
TCTGTGTCACAGAAATGAAA+TGG + Chr1:88709448-88709467 MsG0180005218.01.T01:intron 35.0%
TGCAAAGGAATGATGATATG+GGG + Chr1:88711437-88711456 MsG0180005218.01.T01:intron 35.0%
TGGTACAATCAAATTGTGGT+TGG - Chr1:88711600-88711619 None:intergenic 35.0%
TGTGATCGAGTTTATTATGC+TGG + Chr1:88709674-88709693 MsG0180005218.01.T01:intron 35.0%
TGTTGAGTGAAAAAGACAAG+TGG + Chr1:88711908-88711927 MsG0180005218.01.T01:three_prime_UTR 35.0%
TTCTTATTGGGTTCTTTGTG+TGG + Chr1:88711161-88711180 MsG0180005218.01.T01:intron 35.0%
TTGAAGCAGCTGTTGTAATT+TGG + Chr1:88707174-88707193 MsG0180005218.01.T01:five_prime_UTR 35.0%
TTGATGAACATACCTGAACA+CGG - Chr1:88708908-88708927 None:intergenic 35.0%
! AAAAGAAGAGTGCAAATAGC+AGG + Chr1:88711834-88711853 MsG0180005218.01.T01:three_prime_UTR 35.0%
! AACGGTGAAAGAAGCTTTTA+CGG + Chr1:88708371-88708390 MsG0180005218.01.T01:CDS 35.0%
! AAGATAAGCGAGTGTTTTTC+CGG - Chr1:88708055-88708074 None:intergenic 35.0%
! AATCTAAGTTGAGCAATGCA+GGG - Chr1:88710293-88710312 None:intergenic 35.0%
! CCTTTCAAACAAAGCTTTTC+AGG + Chr1:88710155-88710174 MsG0180005218.01.T01:intron 35.0%
! GTTTGTTACATGAACATGAC+AGG + Chr1:88709770-88709789 MsG0180005218.01.T01:intron 35.0%
! TGTGTAGAGAATTTTCACCT+CGG - Chr1:88707715-88707734 None:intergenic 35.0%
!! ACTCCATCTTTCTAGCTATT+AGG + Chr1:88712001-88712020 MsG0180005218.01.T01:three_prime_UTR 35.0%
!! CCTGAAAAGCTTTGTTTGAA+AGG - Chr1:88710158-88710177 None:intergenic 35.0%
!! CTCCATCTTTCTAGCTATTA+GGG + Chr1:88712002-88712021 MsG0180005218.01.T01:three_prime_UTR 35.0%
!! GCTGAAAGACACTTTAAAAC+CGG + Chr1:88708416-88708435 MsG0180005218.01.T01:CDS 35.0%
!! GTTTAGGTTGGTTCTATAGA+CGG - Chr1:88710080-88710099 None:intergenic 35.0%
!! TCAAAGTGTTTTCTGGTGAT+TGG + Chr1:88707492-88707511 MsG0180005218.01.T01:five_prime_UTR 35.0%
!! TTTAGGTTGGTTCTATAGAC+GGG - Chr1:88710079-88710098 None:intergenic 35.0%
!!! AGGTATTTTAGAACACACTG+AGG - Chr1:88709581-88709600 None:intergenic 35.0%
!!! GGTATTTTAGAACACACTGA+GGG - Chr1:88709580-88709599 None:intergenic 35.0%
!!! GTATTTTAGAACACACTGAG+GGG - Chr1:88709579-88709598 None:intergenic 35.0%
!!! TTTTTTCCGTAGTCCTGAAA+AGG + Chr1:88710968-88710987 MsG0180005218.01.T01:intron 35.0%
AAAACGGTAAGCACACTCAT+TGG + Chr1:88710100-88710119 MsG0180005218.01.T01:intron 40.0%
AAAATGTTGCCGGGTAAAGA+CGG + Chr1:88711762-88711781 MsG0180005218.01.T01:three_prime_UTR 40.0%
AAAATTCAGAGGGTGGTGAT+TGG + Chr1:88712123-88712142 MsG0180005218.01.T01:three_prime_UTR 40.0%
AAATAGGAAAAGGGTAGGGT+AGG + Chr1:88710869-88710888 MsG0180005218.01.T01:intron 40.0%
AAGCCTAATCTGAATTGGTG+GGG + Chr1:88709619-88709638 MsG0180005218.01.T01:intron 40.0%
AATGTGGAGTCAGTTCTGTT+TGG + Chr1:88709900-88709919 MsG0180005218.01.T01:CDS 40.0%
ACTTGCATCTGTATCCACAT+TGG - Chr1:88709826-88709845 None:intergenic 40.0%
AGCTTATCCGTTTCAATGCT+TGG - Chr1:88707820-88707839 None:intergenic 40.0%
ATAAACACAAGCACGGTCTT+TGG + Chr1:88710494-88710513 MsG0180005218.01.T01:intron 40.0%
ATTATGATCGGGTTACGAGA+TGG + Chr1:88708769-88708788 MsG0180005218.01.T01:CDS 40.0%
ATTCCCCACCAATTCAGATT+AGG - Chr1:88709625-88709644 None:intergenic 40.0%
CAACATCAGGTATCTGCTTA+GGG - Chr1:88707912-88707931 None:intergenic 40.0%
CACAAGTTTCAATGTGTTGC+TGG - Chr1:88710463-88710482 None:intergenic 40.0%
CACGGACATAATTAGTACTC+CGG - Chr1:88708890-88708909 None:intergenic 40.0%
CAGAGAGAAACTGAGTCAAA+AGG - Chr1:88707354-88707373 None:intergenic 40.0%
CAGCAATGTAAAGATGCTGA+TGG + Chr1:88709848-88709867 MsG0180005218.01.T01:CDS 40.0%
CAGGACTACGGAAAAAACTT+TGG - Chr1:88710965-88710984 None:intergenic 40.0%
CATCAGCATCTTTACATTGC+TGG - Chr1:88709850-88709869 None:intergenic 40.0%
CCTATATATCCGTCTTTACC+CGG - Chr1:88711774-88711793 None:intergenic 40.0%
CTCAGAAGTCATCTATGCAA+AGG - Chr1:88711276-88711295 None:intergenic 40.0%
CTGTAGAAACTCTGTTGATG+GGG + Chr1:88710370-88710389 MsG0180005218.01.T01:intron 40.0%
CTTCTGTGTATTCATGGTCA+TGG + Chr1:88710665-88710684 MsG0180005218.01.T01:intron 40.0%
CTTGAGAGCAAGTTTCTCTT+TGG + Chr1:88707862-88707881 MsG0180005218.01.T01:CDS 40.0%
CTTGCATCTGTATCCACATT+GGG - Chr1:88709825-88709844 None:intergenic 40.0%
GACTACGGAAAAAACTTTGG+AGG - Chr1:88710962-88710981 None:intergenic 40.0%
GCAAAAGATATCCCCTATGA+TGG - Chr1:88709227-88709246 None:intergenic 40.0%
GCTTGTTTGAAAGCAACAGT+GGG - Chr1:88710023-88710042 None:intergenic 40.0%
GGAACTTGGAAGATGTTAAG+AGG + Chr1:88710890-88710909 MsG0180005218.01.T01:intron 40.0%
GGATTTCTCAAGAGACTGTT+CGG + Chr1:88708300-88708319 MsG0180005218.01.T01:CDS 40.0%
GGTAAAGACGGATATATAGG+AGG + Chr1:88711774-88711793 MsG0180005218.01.T01:three_prime_UTR 40.0%
GGTCCTAATATGCTATTGGA+GGG + Chr1:88711335-88711354 MsG0180005218.01.T01:intron 40.0%
GGTTGTTGAGAATCAACATC+AGG - Chr1:88707925-88707944 None:intergenic 40.0%
GTCTGTAGAAACTCTGTTGA+TGG + Chr1:88710368-88710387 MsG0180005218.01.T01:intron 40.0%
GTTCAAATGCGGTCTATTGA+TGG + Chr1:88708579-88708598 MsG0180005218.01.T01:CDS 40.0%
TCAACATCAGGTATCTGCTT+AGG - Chr1:88707913-88707932 None:intergenic 40.0%
TCAATAGACCGCATTTGAAC+CGG - Chr1:88708579-88708598 None:intergenic 40.0%
TCACAAGAGGACAGACATTA+TGG + Chr1:88711973-88711992 MsG0180005218.01.T01:three_prime_UTR 40.0%
TCACTTGAAATACGAGCCAT+TGG - Chr1:88708816-88708835 None:intergenic 40.0%
TCATAGCACGGTATCAAAAC+CGG - Chr1:88708438-88708457 None:intergenic 40.0%
TGAAGATAGACAAGGGTTAG+AGG + Chr1:88711885-88711904 MsG0180005218.01.T01:three_prime_UTR 40.0%
TGACCCTCCAATAGCATATT+AGG - Chr1:88711341-88711360 None:intergenic 40.0%
TGGTCCTAATATGCTATTGG+AGG + Chr1:88711334-88711353 MsG0180005218.01.T01:intron 40.0%
TGTCAGCTTCTGTGTATTCA+TGG + Chr1:88710659-88710678 MsG0180005218.01.T01:intron 40.0%
TTATAGCATGTGGAATGCTG+TGG + Chr1:88709416-88709435 MsG0180005218.01.T01:intron 40.0%
TTGGCCATGAATAATCCTAC+CGG + Chr1:88708633-88708652 MsG0180005218.01.T01:CDS 40.0%
! AGCAAGTTGAAGGGTATGTA+TGG + Chr1:88709260-88709279 MsG0180005218.01.T01:intron 40.0%
! AGCTTGTTTGAAAGCAACAG+TGG - Chr1:88710024-88710043 None:intergenic 40.0%
! CAAGTTGAAGGGTATGTATG+GGG + Chr1:88709262-88709281 MsG0180005218.01.T01:intron 40.0%
! CTACGGAAAAAACTTTGGAG+GGG - Chr1:88710960-88710979 None:intergenic 40.0%
! GAATCTAAGTTGAGCAATGC+AGG - Chr1:88710294-88710313 None:intergenic 40.0%
! GAGTGTTGTAAACCCTAGTA+CGG + Chr1:88708998-88709017 MsG0180005218.01.T01:intron 40.0%
! GCAAGTTGAAGGGTATGTAT+GGG + Chr1:88709261-88709280 MsG0180005218.01.T01:intron 40.0%
! TACTTGAACCGGTTCAAATG+CGG + Chr1:88708568-88708587 MsG0180005218.01.T01:CDS 40.0%
!! AGCTGGATTTGGACTTGTTT+TGG + Chr1:88709291-88709310 MsG0180005218.01.T01:intron 40.0%
!! AGGTATTTCTGAGGGCATTT+AGG + Chr1:88711101-88711120 MsG0180005218.01.T01:intron 40.0%
!! GATTTGCTAGTTCTTTCGCT+TGG + Chr1:88708717-88708736 MsG0180005218.01.T01:CDS 40.0%
!! GCAAGAACCAAGCATTGAAA+CGG + Chr1:88707810-88707829 MsG0180005218.01.T01:CDS 40.0%
!! GCTGGATTTGGACTTGTTTT+GGG + Chr1:88709292-88709311 MsG0180005218.01.T01:intron 40.0%
!! TGAACGGAAACCGATTTTCT+CGG + Chr1:88708194-88708213 MsG0180005218.01.T01:CDS 40.0%
!!! AATCGCCGATTATTTTGACG+TGG + Chr1:88708116-88708135 MsG0180005218.01.T01:CDS 40.0%
!!! GCTTACCGTTTTGTTTAGGT+TGG - Chr1:88710092-88710111 None:intergenic 40.0%
!!! GTGTGCTTACCGTTTTGTTT+AGG - Chr1:88710096-88710115 None:intergenic 40.0%
!!! TGGCATTTTCTGGTTCTGTT+CGG + Chr1:88707194-88707213 MsG0180005218.01.T01:five_prime_UTR 40.0%
AAAAGGGTAGGGTAGGAACT+TGG + Chr1:88710876-88710895 MsG0180005218.01.T01:intron 45.0%
AAATTCTACCGTCAGGGAAC+AGG + Chr1:88708255-88708274 MsG0180005218.01.T01:CDS 45.0%
ACAGGCAAGTGGATCAAGTA+TGG + Chr1:88709788-88709807 MsG0180005218.01.T01:intron 45.0%
ACATGAACATGACAGGCAAG+TGG + Chr1:88709777-88709796 MsG0180005218.01.T01:intron 45.0%
AGCAGATGAGATGTTGAAGC+AGG + Chr1:88709875-88709894 MsG0180005218.01.T01:CDS 45.0%
AGGCAAGTGGATCAAGTATG+GGG + Chr1:88709790-88709809 MsG0180005218.01.T01:intron 45.0%
ATGATATGGGGACAACAACG+TGG + Chr1:88711449-88711468 MsG0180005218.01.T01:intron 45.0%
CAGGCAAGTGGATCAAGTAT+GGG + Chr1:88709789-88709808 MsG0180005218.01.T01:intron 45.0%
CATGAATAATCCTACCGGTG+CGG + Chr1:88708638-88708657 MsG0180005218.01.T01:CDS 45.0%
CCGGGTAAAGACGGATATAT+AGG + Chr1:88711771-88711790 MsG0180005218.01.T01:three_prime_UTR 45.0%
CTGTTTGGAGGGAAGAAGAT+TGG + Chr1:88709915-88709934 MsG0180005218.01.T01:CDS 45.0%
GATGTTGAAGCAGGAGAATG+TGG + Chr1:88709884-88709903 MsG0180005218.01.T01:CDS 45.0%
GCTACGATGATCAAAAGCTC+TGG + Chr1:88707884-88707903 MsG0180005218.01.T01:CDS 45.0%
GGCTGCCACGTCAAAATAAT+CGG - Chr1:88708124-88708143 None:intergenic 45.0%
GGGAAGAAATTCTACCGTCA+GGG + Chr1:88708249-88708268 MsG0180005218.01.T01:CDS 45.0%
GGTGTCTTCAACAACCAAGA+TGG + Chr1:88711237-88711256 MsG0180005218.01.T01:intron 45.0%
GTGGGGTTTCTTCCATCATA+GGG + Chr1:88709212-88709231 MsG0180005218.01.T01:intron 45.0%
TAAGGAGAAGCAAAGAGTGG+AGG - Chr1:88707459-88707478 None:intergenic 45.0%
TATGTATGGGGTGAGATAGC+TGG + Chr1:88709274-88709293 MsG0180005218.01.T01:intron 45.0%
TCCGCACGTGAGAACAAAAA+CGG - Chr1:88708477-88708496 None:intergenic 45.0%
TGAACCGGGTTTACTTGAAC+CGG + Chr1:88708557-88708576 MsG0180005218.01.T01:CDS 45.0%
TGAGTCAATTTCACACCAGC+AGG + Chr1:88709177-88709196 MsG0180005218.01.T01:intron 45.0%
TGGAGTCAGTTCTGTTTGGA+GGG + Chr1:88709904-88709923 MsG0180005218.01.T01:CDS 45.0%
TGGGATACTTTGCTCACAAG+AGG + Chr1:88711960-88711979 MsG0180005218.01.T01:three_prime_UTR 45.0%
TGGGGTTTCTTCCATCATAG+GGG + Chr1:88709213-88709232 MsG0180005218.01.T01:intron 45.0%
TGTATACTCACAATCGACGG+AGG + Chr1:88708009-88708028 MsG0180005218.01.T01:CDS 45.0%
TGTGGGGTTTCTTCCATCAT+AGG + Chr1:88709211-88709230 MsG0180005218.01.T01:intron 45.0%
TTGAAATACGAGCCATTGGC+CGG - Chr1:88708812-88708831 None:intergenic 45.0%
TTGGTTGCAGCGCAAATGAT+TGG + Chr1:88708961-88708980 MsG0180005218.01.T01:intron 45.0%
! AGAAGAGTGCAAATAGCAGG+TGG + Chr1:88711837-88711856 MsG0180005218.01.T01:three_prime_UTR 45.0%
! CTAGTTCTTTCGCTTGGAAC+CGG + Chr1:88708723-88708742 MsG0180005218.01.T01:CDS 45.0%
! GATTTTCGCGTTCTGATCAC+CGG - Chr1:88708100-88708119 None:intergenic 45.0%
! GGTGAAAGAAGCTTTTACGG+CGG + Chr1:88708374-88708393 MsG0180005218.01.T01:CDS 45.0%
! TGAAATTACGGGTTGTGGAG+TGG + Chr1:88711042-88711061 MsG0180005218.01.T01:intron 45.0%
! TGAACCGGTTCAAGTAAACC+CGG - Chr1:88708564-88708583 None:intergenic 45.0%
! TGATGGTGTAACCAAGTGTG+TGG + Chr1:88708596-88708615 MsG0180005218.01.T01:CDS 45.0%
!! AACTTGTTCAGGAGCATCAG+AGG + Chr1:88709979-88709998 MsG0180005218.01.T01:CDS 45.0%
!! ACGTGCGGATGCTTTAGAAA+CGG + Chr1:88708488-88708507 MsG0180005218.01.T01:CDS 45.0%
!! CTTCCCACGTTGATTCTTGA+CGG - Chr1:88707986-88708005 None:intergenic 45.0%
!! GAAGCACCTTTTCAGGACTA+CGG - Chr1:88710977-88710996 None:intergenic 45.0%
!! GCTTTGCTACTTTCGGCAAA+AGG + Chr1:88707260-88707279 MsG0180005218.01.T01:five_prime_UTR 45.0%
!! GGAGCTAGCTTTGCTACTTT+CGG + Chr1:88707253-88707272 MsG0180005218.01.T01:five_prime_UTR 45.0%
!! GTTGGTTCTATAGACGGGTT+GGG - Chr1:88710074-88710093 None:intergenic 45.0%
!! TCTATAGACGGGTTGGGTTT+GGG - Chr1:88710068-88710087 None:intergenic 45.0%
!! TCTGTTCGGTGCTTGTTTGT+TGG + Chr1:88707208-88707227 MsG0180005218.01.T01:five_prime_UTR 45.0%
!! TTCTATAGACGGGTTGGGTT+TGG - Chr1:88710069-88710088 None:intergenic 45.0%
!!! GACATGAGAAGCACCTTTTC+AGG - Chr1:88710984-88711003 None:intergenic 45.0%
!!! GATTATTTTGACGTGGCAGC+CGG + Chr1:88708123-88708142 MsG0180005218.01.T01:CDS 45.0%
!!! TATGTATTTTTTTTTTAATT+TGG + Chr1:88707543-88707562 MsG0180005218.01.T01:intron 5.0%
AAAGGGTGGGAAGATCTCTG+TGG + Chr1:88711940-88711959 MsG0180005218.01.T01:three_prime_UTR 50.0%
AAGGGTGGGAAGATCTCTGT+GGG + Chr1:88711941-88711960 MsG0180005218.01.T01:three_prime_UTR 50.0%
ATACTCACAATCGACGGAGG+AGG + Chr1:88708012-88708031 MsG0180005218.01.T01:CDS 50.0%
ATGCCCAAACGCCATAGCAA+CGG - Chr1:88708865-88708884 None:intergenic 50.0%
ATGCTATTGGAGGGTCACGT+GGG + Chr1:88711344-88711363 MsG0180005218.01.T01:intron 50.0%
CTCAAGAGACTGTTCGGTAG+CGG + Chr1:88708306-88708325 MsG0180005218.01.T01:CDS 50.0%
GAGAAGCAAAGAGTGGAGGA+GGG - Chr1:88707455-88707474 None:intergenic 50.0%
GAGATGGAAGGCGAAGGATT+GGG + Chr1:88708785-88708804 MsG0180005218.01.T01:CDS 50.0%
GAGGGTGGTGATTGGTGAAT+TGG + Chr1:88712131-88712150 MsG0180005218.01.T01:three_prime_UTR 50.0%
GGATCAAGTATGGGGCAATG+TGG + Chr1:88709798-88709817 MsG0180005218.01.T01:CDS 50.0%
GGGGAAGAAATTCTACCGTC+AGG + Chr1:88708248-88708267 MsG0180005218.01.T01:CDS 50.0%
GTGGAGTCAGTTCTGTTTGG+AGG + Chr1:88709903-88709922 MsG0180005218.01.T01:CDS 50.0%
GTGTCATCCGCCGAGAAAAT+CGG - Chr1:88708207-88708226 None:intergenic 50.0%
GTTGACCTCCAACAACTGAC+CGG - Chr1:88708745-88708764 None:intergenic 50.0%
TAGAGCAACTTCGGCTGAAC+CGG + Chr1:88708542-88708561 MsG0180005218.01.T01:CDS 50.0%
TAGCAACGGCCTGATCAACA+AGG - Chr1:88708851-88708870 None:intergenic 50.0%
TATGCTATTGGAGGGTCACG+TGG + Chr1:88711343-88711362 MsG0180005218.01.T01:intron 50.0%
TGAAATACGAGCCATTGGCC+GGG - Chr1:88708811-88708830 None:intergenic 50.0%
TGATCGGGTTACGAGATGGA+AGG + Chr1:88708773-88708792 MsG0180005218.01.T01:CDS 50.0%
TGGGGTGAGATAGCTGGATT+TGG + Chr1:88709280-88709299 MsG0180005218.01.T01:intron 50.0%
TGGTGTAACCAAGTGTGTGG+CGG + Chr1:88708599-88708618 MsG0180005218.01.T01:CDS 50.0%
TGTTGATCAGGCCGTTGCTA+TGG + Chr1:88708851-88708870 MsG0180005218.01.T01:CDS 50.0%
TTCACACCAGCAGGAGAGTA+AGG + Chr1:88709186-88709205 MsG0180005218.01.T01:intron 50.0%
TTCCATTGCCTGTTCCCTGA+CGG - Chr1:88708266-88708285 None:intergenic 50.0%
TTCTATAGGCGTCACTTCCG+AGG + Chr1:88707695-88707714 MsG0180005218.01.T01:intron 50.0%
TTGGGTTTGGGCTTCTAGGT+GGG - Chr1:88710056-88710075 None:intergenic 50.0%
! CGCACCGGTAGGATTATTCA+TGG - Chr1:88708640-88708659 None:intergenic 50.0%
! CGGAAAAAACTTTGGAGGGG+TGG - Chr1:88710957-88710976 None:intergenic 50.0%
! GAAGCTTTTACGGCGGAGAA+TGG + Chr1:88708381-88708400 MsG0180005218.01.T01:CDS 50.0%
! GCTTGCTGGAGAACTTGTTC+AGG + Chr1:88709968-88709987 MsG0180005218.01.T01:CDS 50.0%
! GGAGGTGTGTAGAGCAACTT+CGG + Chr1:88708533-88708552 MsG0180005218.01.T01:CDS 50.0%
!! ACGGAAACCGATTTTCTCGG+CGG + Chr1:88708197-88708216 MsG0180005218.01.T01:CDS 50.0%
!! CAGAAGCTTGATTGGCTTGC+TGG + Chr1:88709954-88709973 MsG0180005218.01.T01:CDS 50.0%
!! GGTTGGTTCTATAGACGGGT+TGG - Chr1:88710075-88710094 None:intergenic 50.0%
!! TTGGGCTTCTAGGTGGGTTT+TGG - Chr1:88710050-88710069 None:intergenic 50.0%
!! TTGTTCAGGAGCATCAGAGG+AGG + Chr1:88709982-88710001 MsG0180005218.01.T01:CDS 50.0%
!!! GCCGTTTTTGTTCTCACGTG+CGG + Chr1:88708473-88708492 MsG0180005218.01.T01:CDS 50.0%
ACCAAGTGTGTGGCGGTTGA+TGG + Chr1:88708606-88708625 MsG0180005218.01.T01:CDS 55.0%
ACCATCAACCGCCACACACT+TGG - Chr1:88708610-88708629 None:intergenic 55.0%
AGAGCAACTTCGGCTGAACC+GGG + Chr1:88708543-88708562 MsG0180005218.01.T01:CDS 55.0%
AGCAGGAGAGTAAGGCGTGT+GGG + Chr1:88709194-88709213 MsG0180005218.01.T01:intron 55.0%
AGGAGTTTCCGTTCGTGCGA+GGG + Chr1:88708688-88708707 MsG0180005218.01.T01:CDS 55.0%
AGGCCGTTGCTATGGCGTTT+GGG + Chr1:88708859-88708878 MsG0180005218.01.T01:CDS 55.0%
CACATGTGTAATCGCCGCAC+CGG - Chr1:88708655-88708674 None:intergenic 55.0%
CCGCCGTCAAGAATCAACGT+GGG + Chr1:88707980-88707999 MsG0180005218.01.T01:CDS 55.0%
CGAGATGGAAGGCGAAGGAT+TGG + Chr1:88708784-88708803 MsG0180005218.01.T01:CDS 55.0%
CGTGAAAATACCTCCGACGC+CGG - Chr1:88708151-88708170 None:intergenic 55.0%
CTCCGCTGACCTTGTTGATC+AGG + Chr1:88708839-88708858 MsG0180005218.01.T01:CDS 55.0%
CTGATCAACAAGGTCAGCGG+AGG - Chr1:88708841-88708860 None:intergenic 55.0%
CTTGAGAAATCCTCTCCCGC+CGG - Chr1:88708292-88708311 None:intergenic 55.0%
GAACAAAAACGGCGCCGTAC+TGG - Chr1:88708466-88708485 None:intergenic 55.0%
GACGGCGGAAACAGAGTCAA+CGG - Chr1:88707968-88707987 None:intergenic 55.0%
GAGTTCCGTCGAATCTGCGA+CGG + Chr1:88708335-88708354 MsG0180005218.01.T01:CDS 55.0%
GCTTGGAACCGGTCAGTTGT+TGG + Chr1:88708734-88708753 MsG0180005218.01.T01:CDS 55.0%
GGAACAGGCAATGGAAGCTC+CGG + Chr1:88708270-88708289 MsG0180005218.01.T01:CDS 55.0%
GGACAACAACGTGGCAAGAC+AGG + Chr1:88711458-88711477 MsG0180005218.01.T01:intron 55.0%
GGAGAAGCAAAGAGTGGAGG+AGG - Chr1:88707456-88707475 None:intergenic 55.0%
GGCCTGATCAACAAGGTCAG+CGG - Chr1:88708844-88708863 None:intergenic 55.0%
GGTTACGAGATGGAAGGCGA+AGG + Chr1:88708779-88708798 MsG0180005218.01.T01:CDS 55.0%
GTTGGGTTTGGGCTTCTAGG+TGG - Chr1:88710057-88710076 None:intergenic 55.0%
TACCGTCAGGGAACAGGCAA+TGG + Chr1:88708261-88708280 MsG0180005218.01.T01:CDS 55.0%
TCCGCCGTCAAGAATCAACG+TGG + Chr1:88707979-88707998 MsG0180005218.01.T01:CDS 55.0%
TGGAACCGGTCAGTTGTTGG+AGG + Chr1:88708737-88708756 MsG0180005218.01.T01:CDS 55.0%
! AAGAGACTGTTCGGTAGCGG+AGG + Chr1:88708309-88708328 MsG0180005218.01.T01:CDS 55.0%
! CTATGGCGTTTGGGCATTGC+CGG + Chr1:88708868-88708887 MsG0180005218.01.T01:CDS 55.0%
! GGATGACACGTGGCGGTTTT+TGG + Chr1:88708218-88708237 MsG0180005218.01.T01:CDS 55.0%
! TTTTCTCGGCGGATGACACG+TGG + Chr1:88708208-88708227 MsG0180005218.01.T01:CDS 55.0%
!! AAGTGTGTGGCGGTTGATGG+TGG + Chr1:88708609-88708628 MsG0180005218.01.T01:CDS 55.0%
!! CCCACGTTGATTCTTGACGG+CGG - Chr1:88707983-88708002 None:intergenic 55.0%
!! TGACACGTGGCGGTTTTTGG+CGG + Chr1:88708221-88708240 MsG0180005218.01.T01:CDS 55.0%
!! TGTGGCGGTTGATGGTGGTT+TGG + Chr1:88708614-88708633 MsG0180005218.01.T01:CDS 55.0%
!!! CGGCGTCGGAGGTATTTTCA+CGG + Chr1:88708149-88708168 MsG0180005218.01.T01:CDS 55.0%
!!! TGGCGGTTTTTGGCGGAACA+GGG + Chr1:88708228-88708247 MsG0180005218.01.T01:CDS 55.0%
AACAGAGTCAACGGCCGTGG+CGG - Chr1:88707959-88707978 None:intergenic 60.0%
ACAGGCAATGGAAGCTCCGG+CGG + Chr1:88708273-88708292 MsG0180005218.01.T01:CDS 60.0%
CACACGCCTTACTCTCCTGC+TGG - Chr1:88709195-88709214 None:intergenic 60.0%
CAGCAGGAGAGTAAGGCGTG+TGG + Chr1:88709193-88709212 MsG0180005218.01.T01:intron 60.0%
CAGGAGTTTCCGTTCGTGCG+AGG + Chr1:88708687-88708706 MsG0180005218.01.T01:CDS 60.0%
CAGGCCGTTGCTATGGCGTT+TGG + Chr1:88708858-88708877 MsG0180005218.01.T01:CDS 60.0%
GACGGCGGGGATGGAGAAAA+CGG + Chr1:88708353-88708372 MsG0180005218.01.T01:CDS 60.0%
GCAGGAGAGTAAGGCGTGTG+GGG + Chr1:88709195-88709214 MsG0180005218.01.T01:intron 60.0%
GGAAACAGAGTCAACGGCCG+TGG - Chr1:88707962-88707981 None:intergenic 60.0%
GGAGTTTCCGTTCGTGCGAG+GGG + Chr1:88708689-88708708 MsG0180005218.01.T01:CDS 60.0%
GGGGCAATGTGGTCCCAATG+TGG + Chr1:88709809-88709828 MsG0180005218.01.T01:CDS 60.0%
TTCCGTCGAATCTGCGACGG+CGG + Chr1:88708338-88708357 MsG0180005218.01.T01:CDS 60.0%
! ATCGACGGAGGAGGTATGCG+AGG + Chr1:88708021-88708040 MsG0180005218.01.T01:CDS 60.0%
! CGGGTTGGGTTTGGGCTTCT+AGG - Chr1:88710060-88710079 None:intergenic 60.0%
! GGTATGCGAGGCATTCTCGC+CGG + Chr1:88708033-88708052 MsG0180005218.01.T01:CDS 60.0%
! TGTGTAATCGCCGCACCGGT+AGG - Chr1:88708651-88708670 None:intergenic 60.0%
!!! GGCGGTTTTTGGCGGAACAG+GGG + Chr1:88708229-88708248 MsG0180005218.01.T01:CDS 60.0%
!!! GTGGCGGTTTTTGGCGGAAC+AGG + Chr1:88708227-88708246 MsG0180005218.01.T01:CDS 60.0%
AATACCTCCGACGCCGGCAC+CGG - Chr1:88708145-88708164 None:intergenic 65.0%
AATGGAAGCTCCGGCGGGAG+AGG + Chr1:88708279-88708298 MsG0180005218.01.T01:CDS 65.0%
CAGGCAATGGAAGCTCCGGC+GGG + Chr1:88708274-88708293 MsG0180005218.01.T01:CDS 65.0%
GAAGGATTGGGCCCGGCCAA+TGG + Chr1:88708797-88708816 MsG0180005218.01.T01:CDS 65.0%
GGAAGGCGAAGGATTGGGCC+CGG + Chr1:88708790-88708809 MsG0180005218.01.T01:CDS 65.0%
GTTTCCGTTCGTGCGAGGGG+TGG + Chr1:88708692-88708711 MsG0180005218.01.T01:CDS 65.0%
TCCGTCGAATCTGCGACGGC+GGG + Chr1:88708339-88708358 MsG0180005218.01.T01:CDS 65.0%
TCCTCCACCCCTCGCACGAA+CGG - Chr1:88708699-88708718 None:intergenic 65.0%
TCTCGGCGGATGACACGTGG+CGG + Chr1:88708211-88708230 MsG0180005218.01.T01:CDS 65.0%
TTTGACGTGGCAGCCGGTGC+CGG + Chr1:88708129-88708148 MsG0180005218.01.T01:CDS 65.0%
ACCACCAACCGTCGCCGCCA+CGG + Chr1:88707942-88707961 MsG0180005218.01.T01:CDS 70.0%
CCCCGCCGTCGCAGATTCGA+CGG - Chr1:88708343-88708362 None:intergenic 70.0%
CCGTCGAATCTGCGACGGCG+GGG + Chr1:88708340-88708359 MsG0180005218.01.T01:CDS 70.0%
CGAATCTGCGACGGCGGGGA+TGG + Chr1:88708344-88708363 MsG0180005218.01.T01:CDS 70.0%
TCCGTTCGTGCGAGGGGTGG+AGG + Chr1:88708695-88708714 MsG0180005218.01.T01:CDS 70.0%
GTCAACGGCCGTGGCGGCGA+CGG - Chr1:88707953-88707972 None:intergenic 75.0%
! ACGGCCGTGGCGGCGACGGT+TGG - Chr1:88707949-88707968 None:intergenic 80.0%
! GCCGTGGCGGCGACGGTTGG+TGG - Chr1:88707946-88707965 None:intergenic 80.0%
!!! GTGGCAGCCGGTGCCGGCGT+CGG + Chr1:88708135-88708154 MsG0180005218.01.T01:CDS 80.0%
!!! GCAGCCGGTGCCGGCGTCGG+AGG + Chr1:88708138-88708157 MsG0180005218.01.T01:CDS 85.0%
Chromosome Type Strat End Strand Name
Chr1 gene 88707151 88712223 88707151 ID=MsG0180005218.01;Name=MsG0180005218.01
Chr1 mRNA 88707151 88712223 88707151 ID=MsG0180005218.01.T01;Parent=MsG0180005218.01;Name=MsG0180005218.01.T01;_AED=0.27;_eAED=0.27;_QI=472|1|1|1|0.33|0|4|517|466
Chr1 exon 88707151 88707541 88707151 ID=MsG0180005218.01.T01:exon:11021;Parent=MsG0180005218.01.T01
Chr1 exon 88707703 88708914 88707703 ID=MsG0180005218.01.T01:exon:11022;Parent=MsG0180005218.01.T01
Chr1 five_prime_UTR 88707151 88707541 88707151 ID=MsG0180005218.01.T01:five_prime_utr;Parent=MsG0180005218.01.T01
Chr1 five_prime_UTR 88707703 88707783 88707703 ID=MsG0180005218.01.T01:five_prime_utr;Parent=MsG0180005218.01.T01
Chr1 CDS 88707784 88708914 88707784 ID=MsG0180005218.01.T01:cds;Parent=MsG0180005218.01.T01
Chr1 CDS 88709792 88710061 88709792 ID=MsG0180005218.01.T01:cds;Parent=MsG0180005218.01.T01
Chr1 three_prime_UTR 88710062 88710105 88710062 ID=MsG0180005218.01.T01:three_prime_utr;Parent=MsG0180005218.01.T01
Chr1 three_prime_UTR 88711751 88712223 88711751 ID=MsG0180005218.01.T01:three_prime_utr;Parent=MsG0180005218.01.T01
Chr1 mRNA 88707506 88712223 88707506 ID=MsG0180005218.01.T02;Parent=MsG0180005218.01;Name=MsG0180005218.01.T02;_AED=0.29;_eAED=0.29;_QI=278|1|1|1|0.5|0.33|3|517|466
Chr1 exon 88707506 88708914 88707506 ID=MsG0180005218.01.T02:exon:11025;Parent=MsG0180005218.01.T02
Chr1 five_prime_UTR 88707506 88707783 88707506 ID=MsG0180005218.01.T02:five_prime_utr;Parent=MsG0180005218.01.T02
Chr1 CDS 88707784 88708914 88707784 ID=MsG0180005218.01.T02:cds;Parent=MsG0180005218.01.T02
Chr1 CDS 88709792 88710061 88709792 ID=MsG0180005218.01.T02:cds;Parent=MsG0180005218.01.T02
Chr1 three_prime_UTR 88710062 88710105 88710062 ID=MsG0180005218.01.T02:three_prime_utr;Parent=MsG0180005218.01.T02
Chr1 three_prime_UTR 88711751 88712223 88711751 ID=MsG0180005218.01.T02:three_prime_utr;Parent=MsG0180005218.01.T02
Gene Sequence

>MsG0180005218.01.T01

ATGGATTCTAGTGATCAATTTGAAATGCAAGAACCAAGCATTGAAACGGATAAGCTCAGCTACGAAATCTTTTCTATTCTTGAGAGCAAGTTTCTCTTTGGCTACGATGATCAAAAGCTCTGGTTCCCTAAGCAGATACCTGATGTTGATTCTCAACAACCACCAACCGTCGCCGCCACGGCCGTTGACTCTGTTTCCGCCGTCAAGAATCAACGTGGGAAGATATGTATACTCACAATCGACGGAGGAGGTATGCGAGGCATTCTCGCCGGAAAAACACTCGCTTATCTTGAGAATGCGTTGAAGAAAAAATCCGGTGATCAGAACGCGAAAATCGCCGATTATTTTGACGTGGCAGCCGGTGCCGGCGTCGGAGGTATTTTCACGGCGATGCTGTTTGCTACAAAAGATGAACGGAAACCGATTTTCTCGGCGGATGACACGTGGCGGTTTTTGGCGGAACAGGGGAAGAAATTCTACCGTCAGGGAACAGGCAATGGAAGCTCCGGCGGGAGAGGATTTCTCAAGAGACTGTTCGGTAGCGGAGGTTCGAGTTCCGTCGAATCTGCGACGGCGGGGATGGAGAAAACGGTGAAAGAAGCTTTTACGGCGGAGAATGGTCGTTGTTTAACGCTGAAAGACACTTTAAAACCGGTTTTGATACCGTGCTATGATTTATCCAGTACGGCGCCGTTTTTGTTCTCACGTGCGGATGCTTTAGAAACGGATAGTTTTGATTTTCGTTTATGGGAGGTGTGTAGAGCAACTTCGGCTGAACCGGGTTTACTTGAACCGGTTCAAATGCGGTCTATTGATGGTGTAACCAAGTGTGTGGCGGTTGATGGTGGTTTGGCCATGAATAATCCTACCGGTGCGGCGATTACACATGTGCTTCATAATAAACAGGAGTTTCCGTTCGTGCGAGGGGTGGAGGATTTGCTAGTTCTTTCGCTTGGAACCGGTCAGTTGTTGGAGGTCAACTATGATTATGATCGGGTTACGAGATGGAAGGCGAAGGATTGGGCCCGGCCAATGGCTCGTATTTCAAGTGATGCCTCCGCTGACCTTGTTGATCAGGCCGTTGCTATGGCGTTTGGGCATTGCCGGAGTACTAATTATGTCCGTGTTCAGGCAAGTGGATCAAGTATGGGGCAATGTGGTCCCAATGTGGATACAGATGCAAGTCCCAGCAATGTAAAGATGCTGATGGGAATAGCAGATGAGATGTTGAAGCAGGAGAATGTGGAGTCAGTTCTGTTTGGAGGGAAGAAGATTGGAGAGCAGAGTAACTTTCAGAAGCTTGATTGGCTTGCTGGAGAACTTGTTCAGGAGCATCAGAGGAGGAGTTGCAGAATAGCTCCCACTGTTGCTTTCAAACAAGCTACACCAAAACCCACCTAG

>MsG0180005218.01.T02

ATGGATTCTAGTGATCAATTTGAAATGCAAGAACCAAGCATTGAAACGGATAAGCTCAGCTACGAAATCTTTTCTATTCTTGAGAGCAAGTTTCTCTTTGGCTACGATGATCAAAAGCTCTGGTTCCCTAAGCAGATACCTGATGTTGATTCTCAACAACCACCAACCGTCGCCGCCACGGCCGTTGACTCTGTTTCCGCCGTCAAGAATCAACGTGGGAAGATATGTATACTCACAATCGACGGAGGAGGTATGCGAGGCATTCTCGCCGGAAAAACACTCGCTTATCTTGAGAATGCGTTGAAGAAAAAATCCGGTGATCAGAACGCGAAAATCGCCGATTATTTTGACGTGGCAGCCGGTGCCGGCGTCGGAGGTATTTTCACGGCGATGCTGTTTGCTACAAAAGATGAACGGAAACCGATTTTCTCGGCGGATGACACGTGGCGGTTTTTGGCGGAACAGGGGAAGAAATTCTACCGTCAGGGAACAGGCAATGGAAGCTCCGGCGGGAGAGGATTTCTCAAGAGACTGTTCGGTAGCGGAGGTTCGAGTTCCGTCGAATCTGCGACGGCGGGGATGGAGAAAACGGTGAAAGAAGCTTTTACGGCGGAGAATGGTCGTTGTTTAACGCTGAAAGACACTTTAAAACCGGTTTTGATACCGTGCTATGATTTATCCAGTACGGCGCCGTTTTTGTTCTCACGTGCGGATGCTTTAGAAACGGATAGTTTTGATTTTCGTTTATGGGAGGTGTGTAGAGCAACTTCGGCTGAACCGGGTTTACTTGAACCGGTTCAAATGCGGTCTATTGATGGTGTAACCAAGTGTGTGGCGGTTGATGGTGGTTTGGCCATGAATAATCCTACCGGTGCGGCGATTACACATGTGCTTCATAATAAACAGGAGTTTCCGTTCGTGCGAGGGGTGGAGGATTTGCTAGTTCTTTCGCTTGGAACCGGTCAGTTGTTGGAGGTCAACTATGATTATGATCGGGTTACGAGATGGAAGGCGAAGGATTGGGCCCGGCCAATGGCTCGTATTTCAAGTGATGCCTCCGCTGACCTTGTTGATCAGGCCGTTGCTATGGCGTTTGGGCATTGCCGGAGTACTAATTATGTCCGTGTTCAGGCAAGTGGATCAAGTATGGGGCAATGTGGTCCCAATGTGGATACAGATGCAAGTCCCAGCAATGTAAAGATGCTGATGGGAATAGCAGATGAGATGTTGAAGCAGGAGAATGTGGAGTCAGTTCTGTTTGGAGGGAAGAAGATTGGAGAGCAGAGTAACTTTCAGAAGCTTGATTGGCTTGCTGGAGAACTTGTTCAGGAGCATCAGAGGAGGAGTTGCAGAATAGCTCCCACTGTTGCTTTCAAACAAGCTACACCAAAACCCACCTAG
Protein sequence

>MsG0180005218.01.T01

MDSSDQFEMQEPSIETDKLSYEIFSILESKFLFGYDDQKLWFPKQIPDVDSQQPPTVAATAVDSVSAVKNQRGKICILTIDGGGMRGILAGKTLAYLENALKKKSGDQNAKIADYFDVAAGAGVGGIFTAMLFATKDERKPIFSADDTWRFLAEQGKKFYRQGTGNGSSGGRGFLKRLFGSGGSSSVESATAGMEKTVKEAFTAENGRCLTLKDTLKPVLIPCYDLSSTAPFLFSRADALETDSFDFRLWEVCRATSAEPGLLEPVQMRSIDGVTKCVAVDGGLAMNNPTGAAITHVLHNKQEFPFVRGVEDLLVLSLGTGQLLEVNYDYDRVTRWKAKDWARPMARISSDASADLVDQAVAMAFGHCRSTNYVRVQASGSSMGQCGPNVDTDASPSNVKMLMGIADEMLKQENVESVLFGGKKIGEQSNFQKLDWLAGELVQEHQRRSCRIAPTVAFKQATPKPT*

>MsG0180005218.01.T02

MDSSDQFEMQEPSIETDKLSYEIFSILESKFLFGYDDQKLWFPKQIPDVDSQQPPTVAATAVDSVSAVKNQRGKICILTIDGGGMRGILAGKTLAYLENALKKKSGDQNAKIADYFDVAAGAGVGGIFTAMLFATKDERKPIFSADDTWRFLAEQGKKFYRQGTGNGSSGGRGFLKRLFGSGGSSSVESATAGMEKTVKEAFTAENGRCLTLKDTLKPVLIPCYDLSSTAPFLFSRADALETDSFDFRLWEVCRATSAEPGLLEPVQMRSIDGVTKCVAVDGGLAMNNPTGAAITHVLHNKQEFPFVRGVEDLLVLSLGTGQLLEVNYDYDRVTRWKAKDWARPMARISSDASADLVDQAVAMAFGHCRSTNYVRVQASGSSMGQCGPNVDTDASPSNVKMLMGIADEMLKQENVESVLFGGKKIGEQSNFQKLDWLAGELVQEHQRRSCRIAPTVAFKQATPKPT*