AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005684.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005684.01.T01 MTR_1g105605 98.391 746 10 1 1 744 1 746 0.0 1518
MsG0180005684.01.T01 MTR_3g084740 44.125 766 394 12 7 743 10 770 0.0 653
MsG0180005684.01.T01 MTR_8g011270 43.394 772 395 11 2 743 4 763 0.0 637
MsG0180005684.01.T01 MTR_3g084740 42.398 684 362 11 7 663 10 688 0.0 558
MsG0180005684.01.T01 MTR_6g452530 52.414 145 58 2 525 659 11 154 1.32e-42 152
MsG0180005684.01.T01 MTR_6g452520 52.414 145 58 2 525 659 11 154 1.56e-42 153
MsG0180005684.01.T01 MTR_6g452510 52.414 145 58 2 525 659 11 154 1.56e-42 153
MsG0180005684.01.T01 MTR_3g083830 40.928 237 64 8 228 462 32 194 8.17e-36 134
MsG0180005684.01.T01 MTR_7g110640 22.048 703 453 22 34 709 164 798 3.88e-21 99.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005684.01.T01 AT5G43670 61.355 797 252 8 1 744 1 794 0.0 1009
MsG0180005684.01.T01 AT3G23660 44.605 760 397 11 5 743 8 764 0.0 665
MsG0180005684.01.T01 AT3G23660 43.384 786 395 13 5 743 8 790 0.0 652
MsG0180005684.01.T01 AT1G05520 42.327 782 409 11 1 743 4 782 0.0 638
MsG0180005684.01.T01 AT4G14160 43.832 762 403 10 4 743 13 771 0.0 636
MsG0180005684.01.T01 AT4G14160 43.644 763 404 10 4 743 13 772 0.0 635
MsG0180005684.01.T01 AT2G21630 43.338 773 393 10 2 743 3 761 0.0 599
MsG0180005684.01.T01 AT4G14160 40.102 591 331 9 4 574 13 600 5.32e-143 433
MsG0180005684.01.T01 AT4G01810 22.399 692 440 19 51 709 200 827 1.72e-23 107
MsG0180005684.01.T01 AT4G01810 22.399 692 440 19 51 709 200 827 1.72e-23 107
MsG0180005684.01.T01 AT4G01810 22.399 692 440 19 51 709 200 827 1.72e-23 107

Find 260 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCTACTTAAACAATTAAT+TGG 0.110749 1:+94887922 None:intergenic
TGGCTTGGGTGGGGACTTCT+AGG 0.145488 1:-94887895 MsG0180005684.01.T01:three_prime_UTR
TCAGCCCAGCTCTGCATTTA+TGG 0.146142 1:-94889410 MsG0180005684.01.T01:CDS
TTCCTTGTGGTGATCCATTA+TGG 0.166108 1:-94888869 MsG0180005684.01.T01:CDS
TCCTTAAGTGGAACATAAAT+TGG 0.174012 1:+94889095 None:intergenic
CATTTGAATCCGATCAATTT+AGG 0.188915 1:-94889693 MsG0180005684.01.T01:CDS
ACTATTGATGTCAAAATTTC+GGG 0.219464 1:-94889586 MsG0180005684.01.T01:CDS
TACTATTGATGTCAAAATTT+CGG 0.221736 1:-94889587 MsG0180005684.01.T01:CDS
CTAAACTCACATTCTGAAAT+TGG 0.225580 1:+94890123 None:intergenic
CTGATGAAACTGCGTATTTC+CGG 0.234643 1:-94889039 MsG0180005684.01.T01:CDS
TGTTCCAAAACAGGGATTTC+TGG 0.241058 1:-94890148 MsG0180005684.01.T01:CDS
AGAATCATGGTATTCACTTC+TGG 0.244413 1:-94889967 MsG0180005684.01.T01:CDS
CACAATGGATTTCGTTGAAT+TGG 0.251009 1:-94891471 MsG0180005684.01.T01:exon
TCCTTGTGGTGATCCATTAT+GGG 0.259198 1:-94888868 MsG0180005684.01.T01:CDS
GGAACCAGAAATCCCTGTTT+TGG 0.272568 1:+94890144 None:intergenic
GGAACATAAATTGGGGATAA+AGG 0.273621 1:+94889104 None:intergenic
TGAGGTGGTTACTGTTAATT+TGG 0.275841 1:+94891698 None:intergenic
CTTCTTCCACTGAGCAATCT+TGG 0.278201 1:+94888844 None:intergenic
TTCTAAAATTCTCATGGTTT+GGG 0.281291 1:+94888804 None:intergenic
GTGTAGGTTGAATCATTATA+AGG 0.283660 1:+94888984 None:intergenic
CCCAATTTATGTTCCACTTA+AGG 0.287293 1:-94889096 MsG0180005684.01.T01:CDS
ATTGTTTAAGTAGGTGATTT+TGG 0.291013 1:-94887915 MsG0180005684.01.T01:three_prime_UTR
TGTTAGAGACGTCAATAAAT+TGG 0.296694 1:+94889068 None:intergenic
TTTCTAAAATTCTCATGGTT+TGG 0.298952 1:+94888803 None:intergenic
ATACAAGAGTGTGTAAAATT+AGG 0.300654 1:+94887647 None:intergenic
CTAAATCTTGCAGTTTCTAT+AGG 0.313799 1:-94889846 MsG0180005684.01.T01:CDS
TCGATTACCAATCACGTATC+TGG 0.316494 1:-94891265 MsG0180005684.01.T01:CDS
TCTAGATCAATTGCAGATAC+TGG 0.318050 1:-94888582 MsG0180005684.01.T01:CDS
CAACGGCGGGGTGTGGGTAG+AGG 0.320692 1:+94891568 None:intergenic
AGGAAGAGGTTACATGATTT+CGG 0.320988 1:-94888521 MsG0180005684.01.T01:three_prime_UTR
CTAGATCCGTTTCTTGAAAC+TGG 0.321984 1:+94891514 None:intergenic
TGTTGTTCGGCAGTGGCTTA+TGG 0.328604 1:+94891608 None:intergenic
GGTGGTTCAACGGCGGGGTG+TGG 0.329028 1:+94891561 None:intergenic
GTCAAAATTTCGGGAGCTCT+TGG 0.333105 1:-94889577 MsG0180005684.01.T01:CDS
CTACTTATTACATGGTTCCT+TGG 0.334328 1:-94888112 MsG0180005684.01.T01:three_prime_UTR
AGGGATTGTTAGGTCTGATT+TGG 0.339917 1:+94891400 None:intergenic
CGGAAGGAAGAAGGATCTTC+TGG 0.343028 1:+94889145 None:intergenic
AGGTCTGATTTGGTTGTTGA+TGG 0.354224 1:+94891410 None:intergenic
ACACAATTAAGATCGATAAA+AGG 0.354642 1:+94888161 None:intergenic
AACTGTTCTGCATCCAGTTC+TGG 0.361114 1:+94888767 None:intergenic
TTTGATTACGTTTGATTCAA+TGG 0.371675 1:-94890997 MsG0180005684.01.T01:CDS
GAGCAATCTTGGACCCATAA+TGG 0.371953 1:+94888855 None:intergenic
CCTTAAGTGGAACATAAATT+GGG 0.371980 1:+94889096 None:intergenic
CACATAGTCCCCAAACTTAG+AGG 0.376203 1:+94889168 None:intergenic
AACACAGCCTGTTCCAAAAC+AGG 0.376787 1:-94890157 MsG0180005684.01.T01:CDS
TGGTTCGGATATCATCTTTA+CGG 0.381108 1:-94888627 MsG0180005684.01.T01:CDS
TGATGGTTAGAGGGATTGTT+AGG 0.382749 1:+94891390 None:intergenic
GTGGCCCATCAAACGAATAT+TGG 0.386146 1:+94888957 None:intergenic
GTACCTGATCGGAAGAAAAT+TGG 0.386477 1:+94890913 None:intergenic
CATCTTCAAAACTAGTCTAA+TGG 0.387475 1:+94888424 None:intergenic
GAACATAAATTGGGGATAAA+GGG 0.387749 1:+94889105 None:intergenic
GTTGAATTGGAGGCAGTAGA+AGG 0.388619 1:-94891458 MsG0180005684.01.T01:CDS
CAATCACTTGACTCCTAAAT+CGG 0.393918 1:+94888236 None:intergenic
GGTGTGGACGGCTAATGTTC+AGG 0.396007 1:+94890196 None:intergenic
ACTTCTGGGCCTGCTACTCT+TGG 0.397015 1:-94889952 MsG0180005684.01.T01:CDS
GAATCATGGTATTCACTTCT+GGG 0.404127 1:-94889966 MsG0180005684.01.T01:CDS
AAAGCAACAAGAGCAGTATC+AGG 0.409675 1:+94891017 None:intergenic
ATCAATTTAGGAAATGTCTA+AGG 0.415893 1:-94889681 MsG0180005684.01.T01:CDS
CGGAAATACGCAGTTTCATC+AGG 0.417657 1:+94889040 None:intergenic
CTGAACCATAAATGCAGAGC+TGG 0.420001 1:+94889405 None:intergenic
TTCATTCTACGTATAACTTC+AGG 0.421752 1:-94890077 MsG0180005684.01.T01:CDS
TTGCAGCTCCAGTGGACCTC+GGG 0.424808 1:+94890040 None:intergenic
AGAACAGTTGGTGGCTGAAC+GGG 0.425965 1:-94888753 MsG0180005684.01.T01:CDS
ACCTACTTAAACAATTAATT+GGG 0.428804 1:+94887923 None:intergenic
GCTGTTGGAAGCTCCAGAAC+TGG 0.430961 1:-94888780 MsG0180005684.01.T01:CDS
CGAGATGGTGGTTCAACGGC+GGG 0.433234 1:+94891555 None:intergenic
TGAGCGCTCGGGTGGATTTG+TGG 0.435162 1:-94889728 MsG0180005684.01.T01:CDS
CAAGATAGAATCGGGGCAAA+TGG 0.435352 1:+94888907 None:intergenic
TTCGGATGCATTGGAAGTAT+AGG 0.438351 1:-94888025 MsG0180005684.01.T01:three_prime_UTR
AAGATGTAGCATCCTGCATA+AGG 0.439209 1:-94888407 MsG0180005684.01.T01:three_prime_UTR
AATAGTAGTCACTATTTCAA+TGG 0.439691 1:+94889603 None:intergenic
GTGGTTCAACGGCGGGGTGT+GGG 0.439977 1:+94891562 None:intergenic
CCCTCGCCAGTTTCAAGAAA+CGG 0.440665 1:-94891520 MsG0180005684.01.T01:five_prime_UTR
TAAAGCACTGGCGCCGTCGC+AGG 0.443528 1:-94891653 MsG0180005684.01.T01:five_prime_UTR
TATACTAGCTATAAAATAGC+TGG 0.445115 1:-94888478 MsG0180005684.01.T01:three_prime_UTR
TCCGTTGGTCATGGAATTCA+TGG 0.445862 1:-94891433 MsG0180005684.01.T01:CDS
AAATCCACCCGAGCGCTCAA+TGG 0.446015 1:+94889732 None:intergenic
AACAGAACAGCCTCTGTCCC+TGG 0.446878 1:+94887765 None:intergenic
GTTAGAGACGTCAATAAATT+GGG 0.449613 1:+94889069 None:intergenic
ATGCCCGTGATGTTGTTAGA+TGG 0.450547 1:-94889216 MsG0180005684.01.T01:CDS
AGAAGCAGCAGCTTCGGTTA+TGG 0.452065 1:-94889272 MsG0180005684.01.T01:CDS
AGGGTTACGTTGAGAACAAA+AGG 0.452981 1:+94891235 None:intergenic
ATCAAAGAGCAAGATAGAAT+CGG 0.454307 1:+94888898 None:intergenic
TTGATCGGATTCAAATGATT+CGG 0.454750 1:+94889699 None:intergenic
CGTCCACACCAGCTGCATAC+TGG 0.456155 1:-94890183 MsG0180005684.01.T01:CDS
TGATCAAGAAGCAGCAGCTT+CGG 0.456711 1:-94889278 MsG0180005684.01.T01:CDS
ACGGTACAGGCAGGGGAACA+TGG 0.459727 1:-94889374 MsG0180005684.01.T01:CDS
GCTGCAATTTCAGCTGCCAT+TGG 0.460310 1:-94890024 MsG0180005684.01.T01:CDS
CATTCCACAGATATTGCTGC+TGG 0.461956 1:-94889304 MsG0180005684.01.T01:CDS
TGGTCACATCTTATAACCTT+TGG 0.463433 1:+94888722 None:intergenic
CCCCAAACTTAGAGGTAAAA+CGG 0.465443 1:+94889176 None:intergenic
TCAAAGAGCAAGATAGAATC+GGG 0.465693 1:+94888899 None:intergenic
TGTAGGTTGAATCATTATAA+GGG 0.466734 1:+94888985 None:intergenic
AACGGTAGTGTGCTGTTGTT+CGG 0.471438 1:+94891595 None:intergenic
GTTTATAACACGGTACAGGC+AGG 0.471778 1:-94889383 MsG0180005684.01.T01:CDS
TCACCAAACTGAAAAGTAAA+GGG 0.474460 1:-94891678 MsG0180005684.01.T01:five_prime_UTR
ACTACTTATTTCGGATGCAT+TGG 0.475492 1:-94888034 MsG0180005684.01.T01:three_prime_UTR
ACACGTCTCTGCTCGGAGAA+TGG 0.475673 1:+94889240 None:intergenic
TGGTCTGTTTATCATTAACT+TGG 0.475694 1:+94889434 None:intergenic
AATGTCATTGTGGGTTCTCA+TGG 0.475832 1:+94889894 None:intergenic
CGGCGGGGTGTGGGTAGAGG+AGG 0.478515 1:+94891571 None:intergenic
TTCAACATACACAGATGGTT+CGG 0.479217 1:-94888642 MsG0180005684.01.T01:CDS
AATCCACCCGAGCGCTCAAT+GGG 0.481475 1:+94889733 None:intergenic
CCCATTGAAAATGTCATTGT+GGG 0.482404 1:+94889885 None:intergenic
CCTCTTTGTTGTGGTTTCCA+AGG 0.483958 1:+94888095 None:intergenic
CTCACCAAACTGAAAAGTAA+AGG 0.485382 1:-94891679 MsG0180005684.01.T01:five_prime_UTR
GACTTCATACCTCTTTGTTG+TGG 0.486544 1:+94888086 None:intergenic
TGGTAATCGAGACGAGCGTA+AGG 0.486726 1:+94891278 None:intergenic
TAGACATTTCCTAAATTGAT+CGG 0.487637 1:+94889684 None:intergenic
TCGAGAACCCATTGAGCGCT+CGG 0.488153 1:-94889740 MsG0180005684.01.T01:CDS
AAATGCAGAGCTGGGCTGAA+TGG 0.489105 1:+94889414 None:intergenic
GAAGAAGCTTGGTTATGATA+AGG 0.491651 1:-94888828 MsG0180005684.01.T01:CDS
TGATAAAACTACTTATTACA+TGG 0.491753 1:-94888120 MsG0180005684.01.T01:three_prime_UTR
AAGTAAAGGGTTTAAAGCAC+TGG 0.491772 1:-94891665 MsG0180005684.01.T01:five_prime_UTR
CTGAACCGCGAAGGAGTAGT+TGG 0.492465 1:-94889010 MsG0180005684.01.T01:CDS
AGTCTAGGAGTGGTGAAGAA+AGG 0.493323 1:-94888067 MsG0180005684.01.T01:three_prime_UTR
AATGGATTTCGTTGAATTGG+AGG 0.494230 1:-94891468 MsG0180005684.01.T01:CDS
ACCCAATTAATTGTTTAAGT+AGG 0.494328 1:-94887924 MsG0180005684.01.T01:three_prime_UTR
AGTCCAGGTCCAAGAGTAGC+AGG 0.496349 1:+94889943 None:intergenic
GCTTGCTCCCTTGACCAAGT+TGG 0.498697 1:-94889775 MsG0180005684.01.T01:CDS
GTGTTTGTCCAGTATGCAGC+TGG 0.501667 1:+94890175 None:intergenic
ACAGCTTTCTAAAATTCTCA+TGG 0.505567 1:+94888798 None:intergenic
ACCATGCAAAAGAACGATCC+TGG 0.506831 1:+94890941 None:intergenic
ATGTGACCAGCATAGTAGTC+AGG 0.507191 1:-94888708 MsG0180005684.01.T01:CDS
CATCTTATAACCTTTGGCAC+TGG 0.507470 1:+94888728 None:intergenic
TAAATTGGGATCTCCTTAAG+TGG 0.510541 1:+94889083 None:intergenic
AACTGGCGAGGGAGAGGTGA+TGG 0.510878 1:+94891531 None:intergenic
AGAGGATCGTAAGGGAGAAG+AGG 0.512714 1:+94891332 None:intergenic
TCGGCGATGGAGCGAGGGAA+AGG 0.512946 1:+94891215 None:intergenic
TAAGTAGGAAAGAGTTCAGC+GGG 0.512994 1:+94891182 None:intergenic
TCTTGAAACTGGCGAGGGAG+AGG 0.514066 1:+94891525 None:intergenic
CACCACTGCTGCACGACGAT+GGG 0.514134 1:-94889335 MsG0180005684.01.T01:CDS
ATATCTAGAAGTACAGGAAT+GGG 0.517316 1:+94888935 None:intergenic
CGAGAACCCATTGAGCGCTC+GGG 0.517565 1:-94889739 MsG0180005684.01.T01:CDS
TCAGAGTCCACAACGAGTCC+AGG 0.518023 1:+94889928 None:intergenic
GAACGAATATCTAGAAGTAC+AGG 0.518525 1:+94888929 None:intergenic
TCTACGTATAACTTCAGGTC+CGG 0.521484 1:-94890072 MsG0180005684.01.T01:CDS
AATATCTAGAAGTACAGGAA+TGG 0.522926 1:+94888934 None:intergenic
GGGCCTGCTACTCTTGGACC+TGG 0.524957 1:-94889946 MsG0180005684.01.T01:CDS
CTTTGATTCGTTCTTCCTTG+TGG 0.525311 1:-94888882 MsG0180005684.01.T01:CDS
CAGCAATTCCAACTTGGTCA+AGG 0.525487 1:+94889767 None:intergenic
CGGCGATGGAGCGAGGGAAA+GGG 0.525845 1:+94891216 None:intergenic
GAAGATAAACGGAAGGAAGA+AGG 0.526796 1:+94889136 None:intergenic
GTGCAAAGGAGAGGATCGTA+AGG 0.529711 1:+94891323 None:intergenic
TGTAACAGATGGATTCAACT+TGG 0.530109 1:+94888670 None:intergenic
TAGAAGGCCTCCGTTGGTCA+TGG 0.530254 1:-94891442 MsG0180005684.01.T01:CDS
GAAGCTCAGCAATTCCAACT+TGG 0.532180 1:+94889761 None:intergenic
AACAAAGAGGTATGAAGTCT+AGG 0.532893 1:-94888082 MsG0180005684.01.T01:three_prime_UTR
GAACAATAGTAACCTTATGC+AGG 0.535963 1:+94888395 None:intergenic
AACCCATCGTCGTGCAGCAG+TGG 0.542579 1:+94889333 None:intergenic
GACAGTGCCAGATACGTGAT+TGG 0.543112 1:+94891258 None:intergenic
ATTGCTCAGTGGAAGAAGCT+TGG 0.543785 1:-94888839 MsG0180005684.01.T01:CDS
ATGGTGGTGCGTACGTTGGA+CGG 0.545573 1:+94891627 None:intergenic
GTTTGGCTGGTTCATCCTGT+GGG 0.548743 1:-94887683 MsG0180005684.01.T01:three_prime_UTR
CAATCAATTCATCCTCACAA+TGG 0.550914 1:-94891486 MsG0180005684.01.T01:exon
AAATGTTGGCTCTAGAATCA+TGG 0.551109 1:-94889980 MsG0180005684.01.T01:CDS
CGGTACAGGCAGGGGAACAT+GGG 0.552230 1:-94889373 MsG0180005684.01.T01:CDS
CGTTGGACGGCAGCCTGCGA+CGG 0.553323 1:+94891640 None:intergenic
TATTCAACAGTGGTGTAAGT+AGG 0.553342 1:+94891167 None:intergenic
TTCAGTTTATAACACGGTAC+AGG 0.554307 1:-94889387 MsG0180005684.01.T01:CDS
ATTGGGTAGAACAAACAAGA+TGG 0.554504 1:+94887940 None:intergenic
TGTTTGGCTGGTTCATCCTG+TGG 0.558321 1:-94887684 MsG0180005684.01.T01:three_prime_UTR
CAGAACAGTTGGTGGCTGAA+CGG 0.558794 1:-94888754 MsG0180005684.01.T01:CDS
ATTAAGATCGATAAAAGGAT+AGG 0.558834 1:+94888166 None:intergenic
AACGAATATTGGAAAAGTGT+AGG 0.560902 1:+94888968 None:intergenic
TCAGTGAGTGAGACCGAGGT+TGG 0.560984 1:-94889523 MsG0180005684.01.T01:CDS
TCTTGGACCTGGACTCGTTG+TGG 0.564738 1:-94889935 MsG0180005684.01.T01:CDS
GAACCCATTGAGCGCTCGGG+TGG 0.564852 1:-94889736 MsG0180005684.01.T01:CDS
ACCTAGCCTGACTACTATGC+TGG 0.565891 1:+94888702 None:intergenic
AGTGTGCTGTTGTTCGGCAG+TGG 0.566256 1:+94891601 None:intergenic
TTATAACACGGTACAGGCAG+GGG 0.567860 1:-94889381 MsG0180005684.01.T01:CDS
GGGATCCAACTACTCCTTCG+CGG 0.568133 1:+94889005 None:intergenic
TCACCACTGCTGCACGACGA+TGG 0.569982 1:-94889336 MsG0180005684.01.T01:CDS
AGAACTGGATGCAGAACAGT+TGG 0.570733 1:-94888765 MsG0180005684.01.T01:CDS
TTTAAACATGATGATGATGA+GGG 0.572026 1:-94889652 MsG0180005684.01.T01:CDS
GGTGTGCACATGATGGTTAG+AGG 0.573658 1:+94891380 None:intergenic
AATCTTGCAGTTTCTATAGG+CGG 0.576088 1:-94889843 MsG0180005684.01.T01:CDS
GCCATGAATTCCATGACCAA+CGG 0.578093 1:+94891432 None:intergenic
AAAAGCAATGCAAGTTCGGT+CGG 0.578544 1:+94889462 None:intergenic
GGGAAGATTAGCGTCGGCGA+TGG 0.578769 1:+94891202 None:intergenic
CAGCAGCAATATCTGTGGAA+TGG 0.580313 1:+94889305 None:intergenic
AATAGCTGGTTTCTAGAGTG+TGG 0.580626 1:-94888464 MsG0180005684.01.T01:three_prime_UTR
CGGCTTATGCTGAACCGCGA+AGG 0.581017 1:-94889019 MsG0180005684.01.T01:CDS
TTGGGTAGAACAAACAAGAT+GGG 0.581412 1:+94887941 None:intergenic
AGCTGAAATTGCAGCTCCAG+TGG 0.583120 1:+94890032 None:intergenic
TGAACCATAAATGCAGAGCT+GGG 0.583186 1:+94889406 None:intergenic
TAGCGTCGGCGATGGAGCGA+GGG 0.583880 1:+94891210 None:intergenic
TCCGTTTCTTGAAACTGGCG+AGG 0.585623 1:+94891519 None:intergenic
CGGCGCCGCATCGAGTGCAA+AGG 0.588744 1:+94891309 None:intergenic
TTTATAACACGGTACAGGCA+GGG 0.591863 1:-94889382 MsG0180005684.01.T01:CDS
TTAGCGTCGGCGATGGAGCG+AGG 0.595860 1:+94891209 None:intergenic
TGAACGGGTTCCAGTGCCAA+AGG 0.596266 1:-94888738 MsG0180005684.01.T01:CDS
AAAATTTGAAGATAAACGGA+AGG 0.596325 1:+94889129 None:intergenic
GGGCATGACACGTCTCTGCT+CGG 0.596609 1:+94889233 None:intergenic
AGCAATTCCAACTTGGTCAA+GGG 0.597325 1:+94889768 None:intergenic
GCCCATTGAAAATGTCATTG+TGG 0.599300 1:+94889884 None:intergenic
ATTGCAGCTCCAGTGGACCT+CGG 0.601250 1:+94890039 None:intergenic
CAGTATGCAGCTGGTGTGGA+CGG 0.601268 1:+94890184 None:intergenic
GGGAGAGGTGATGGACGAGA+TGG 0.601791 1:+94891540 None:intergenic
GTTTAAACATGATGATGATG+AGG 0.601853 1:-94889653 MsG0180005684.01.T01:CDS
GGTACCACCTTGTCCAACCT+CGG 0.602216 1:+94889510 None:intergenic
GGTGTGGGTAGAGGAGGAAA+CGG 0.606164 1:+94891577 None:intergenic
AAGCCATCTAACAACATCAC+GGG 0.606998 1:+94889213 None:intergenic
GATCGTAAGGGAGAAGAGGT+AGG 0.607864 1:+94891336 None:intergenic
GGTAATCGAGACGAGCGTAA+GGG 0.611343 1:+94891279 None:intergenic
CCGCATCGAGTGCAAAGGAG+AGG 0.613097 1:+94891314 None:intergenic
AGAGGTGATGGACGAGATGG+TGG 0.613122 1:+94891543 None:intergenic
ATTCCACAGATATTGCTGCT+GGG 0.613853 1:-94889303 MsG0180005684.01.T01:CDS
CAAAATTCAACATACACAGA+TGG 0.616886 1:-94888647 MsG0180005684.01.T01:CDS
GACAAGGTGGTACCTGCGTG+TGG 0.618247 1:-94889501 MsG0180005684.01.T01:CDS
TGGACGAGATGGTGGTTCAA+CGG 0.620175 1:+94891551 None:intergenic
ACGAGCGTAAGGGTTTAAAA+CGG 0.624354 1:+94891289 None:intergenic
CTTAAGTGGAACATAAATTG+GGG 0.624706 1:+94889097 None:intergenic
GGATACAATTATACACCCAC+AGG 0.625076 1:+94887668 None:intergenic
GCTTATGGTGGTGCGTACGT+TGG 0.625331 1:+94891623 None:intergenic
TCAGTGCCGTGTTGAGAGAG+TGG 0.625706 1:+94891359 None:intergenic
ACTGGATGCAGAACAGTTGG+TGG 0.626186 1:-94888762 MsG0180005684.01.T01:CDS
CCGTTTCTTGAAACTGGCGA+GGG 0.626275 1:+94891520 None:intergenic
AGTGAGACCGAGGTTGGACA+AGG 0.628463 1:-94889517 MsG0180005684.01.T01:CDS
CGCTTCAGTGAGTGAGACCG+AGG 0.630186 1:-94889527 MsG0180005684.01.T01:CDS
GGGTTACGTTGAGAACAAAA+GGG 0.630742 1:+94891236 None:intergenic
TTGCAGATACTGGCAGTGCA+AGG 0.631681 1:-94888572 MsG0180005684.01.T01:CDS
ATTCAACGAAATCCATTGTG+AGG 0.632294 1:+94891474 None:intergenic
CTTCGCGGTTCAGCATAAGC+CGG 0.634012 1:+94889020 None:intergenic
TACAAACCAGCAGCGACAGA+GGG 0.635465 1:+94887739 None:intergenic
TGCAGCTCCAGTGGACCTCG+GGG 0.636160 1:+94890041 None:intergenic
AGGCAGTAGAAGGCCTCCGT+TGG 0.638703 1:-94891448 MsG0180005684.01.T01:CDS
ACAACACTCTAAAAGACCAA+TGG 0.640553 1:+94890008 None:intergenic
AGAGAGTGGTGTGCACATGA+TGG 0.640666 1:+94891373 None:intergenic
ATTAATCGGAGGTACCTGAT+CGG 0.643714 1:+94890902 None:intergenic
CTACAAACCAGCAGCGACAG+AGG 0.644009 1:+94887738 None:intergenic
CAAGCCATCTAACAACATCA+CGG 0.645432 1:+94889212 None:intergenic
GTGTGCACATGATGGTTAGA+GGG 0.648276 1:+94891381 None:intergenic
CCTTGGAAACCACAACAAAG+AGG 0.648522 1:-94888095 MsG0180005684.01.T01:three_prime_UTR
ACGAGATGGTGGTTCAACGG+CGG 0.649290 1:+94891554 None:intergenic
TTCAGCGGGAAGATTAGCGT+CGG 0.651769 1:+94891196 None:intergenic
TGCAAAGGAGAGGATCGTAA+GGG 0.656194 1:+94891324 None:intergenic
AAACCCAGCAGCAATATCTG+TGG 0.656981 1:+94889300 None:intergenic
AGAAGAAGAGTATTCAACAG+TGG 0.657516 1:+94891157 None:intergenic
TCTAGAAGTACAGGAATGGG+TGG 0.661190 1:+94888938 None:intergenic
ACACAGCCTGTTCCAAAACA+GGG 0.661300 1:-94890156 MsG0180005684.01.T01:CDS
GACAGTTTCAAACAACAATG+TGG 0.661817 1:-94887999 MsG0180005684.01.T01:three_prime_UTR
ACCAGCATAGTAGTCAGGCT+AGG 0.662465 1:-94888703 MsG0180005684.01.T01:CDS
TCTATAGGCGGATTGCGAAG+AGG 0.663013 1:-94889831 MsG0180005684.01.T01:CDS
ATGAATTCCATGACCAACGG+AGG 0.664818 1:+94891435 None:intergenic
TGTTCGGCAGTGGCTTATGG+TGG 0.665033 1:+94891611 None:intergenic
TGTCCAGTATGCAGCTGGTG+TGG 0.665544 1:+94890180 None:intergenic
ACCCATAATGGATCACCACA+AGG 0.667206 1:+94888867 None:intergenic
TTATGGTTCAGTTTATAACA+CGG 0.670322 1:-94889393 MsG0180005684.01.T01:CDS
AGAGGTATGAAGTCTAGGAG+TGG 0.679089 1:-94888077 MsG0180005684.01.T01:three_prime_UTR
CCTCTCCTTTGCACTCGATG+CGG 0.680345 1:-94891314 MsG0180005684.01.T01:CDS
AAGAGGTTACATGATTTCGG+CGG 0.686625 1:-94888518 MsG0180005684.01.T01:three_prime_UTR
TGTATTCAACTTCCACACGC+AGG 0.686684 1:+94889489 None:intergenic
GAGATGGTGGTTCAACGGCG+GGG 0.698569 1:+94891556 None:intergenic
GAGACCGAGGTTGGACAAGG+TGG 0.712733 1:-94889514 MsG0180005684.01.T01:CDS
CAAAGAGCAAGATAGAATCG+GGG 0.712881 1:+94888900 None:intergenic
GCAGCTCCAGTGGACCTCGG+GGG 0.714974 1:+94890042 None:intergenic
GTAAGTAGGAAAGAGTTCAG+CGG 0.716936 1:+94891181 None:intergenic
TGCACACCACTCTCTCAACA+CGG 0.725723 1:-94891365 MsG0180005684.01.T01:CDS
ATGGGTCCAAGATTGCTCAG+TGG 0.775938 1:-94888850 MsG0180005684.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTGTAAGTAGATTTTA+AGG - Chr1:94890788-94890807 MsG0180005684.01.T01:intron 15.0%
!!! CTAATTTTACATTAAATTTG+AGG - Chr1:94888968-94888987 MsG0180005684.01.T01:CDS 15.0%
!!! TTTTTAGAAACTACTTATTT+CGG - Chr1:94891286-94891305 MsG0180005684.01.T01:CDS 15.0%
!! ACCTACTTAAACAATTAATT+GGG + Chr1:94891409-94891428 None:intergenic 20.0%
!! TACTATTGATGTCAAAATTT+CGG - Chr1:94889742-94889761 MsG0180005684.01.T01:CDS 20.0%
!! TATGGCTCAAATAAAATAAT+CGG + Chr1:94888804-94888823 None:intergenic 20.0%
!! TGAATGAAAAGGTAATTAAT+CGG + Chr1:94888444-94888463 None:intergenic 20.0%
!! TGATAAAACTACTTATTACA+TGG - Chr1:94891209-94891228 MsG0180005684.01.T01:CDS 20.0%
!!! TCTTAATTGTGTATTTTGAT+AGG - Chr1:94891179-94891198 MsG0180005684.01.T01:CDS 20.0%
!!! TGTTAGGTTTTTTTTTTAGT+GGG - Chr1:94891492-94891511 MsG0180005684.01.T01:five_prime_UTR 20.0%
! AAAATTTGAAGATAAACGGA+AGG + Chr1:94890203-94890222 None:intergenic 25.0%
! AATAGTAGTCACTATTTCAA+TGG + Chr1:94889729-94889748 None:intergenic 25.0%
! ACACAATTAAGATCGATAAA+AGG + Chr1:94891171-94891190 None:intergenic 25.0%
! ACCCAATTAATTGTTTAAGT+AGG - Chr1:94891405-94891424 MsG0180005684.01.T01:CDS 25.0%
! ACTATTGATGTCAAAATTTC+GGG - Chr1:94889743-94889762 MsG0180005684.01.T01:CDS 25.0%
! ATAACAGTGTATGAATGAAA+AGG + Chr1:94888455-94888474 None:intergenic 25.0%
! ATCAATTTAGGAAATGTCTA+AGG - Chr1:94889648-94889667 MsG0180005684.01.T01:CDS 25.0%
! ATCGATTACAAAAACAAAAG+CGG + Chr1:94888226-94888245 None:intergenic 25.0%
! ATTAAGATCGATAAAAGGAT+AGG + Chr1:94891166-94891185 None:intergenic 25.0%
! CACCTACTTAAACAATTAAT+TGG + Chr1:94891410-94891429 None:intergenic 25.0%
! GGGAAAAATTTGAAGATAAA+CGG + Chr1:94890207-94890226 None:intergenic 25.0%
! TAGACATTTCCTAAATTGAT+CGG + Chr1:94889648-94889667 None:intergenic 25.0%
! TAGCTTATGAAAACAACTTA+TGG + Chr1:94888822-94888841 None:intergenic 25.0%
! TATACTAGCTATAAAATAGC+TGG - Chr1:94890851-94890870 MsG0180005684.01.T01:intron 25.0%
! TTATGGTTCAGTTTATAACA+CGG - Chr1:94889936-94889955 MsG0180005684.01.T01:CDS 25.0%
! TTTGATTACGTTTGATTCAA+TGG - Chr1:94888332-94888351 MsG0180005684.01.T01:three_prime_UTR 25.0%
!! ATACAAGAGTGTGTAAAATT+AGG + Chr1:94891685-94891704 None:intergenic 25.0%
!! ATTGTTTAAGTAGGTGATTT+TGG - Chr1:94891414-94891433 MsG0180005684.01.T01:CDS 25.0%
!! TGTAGGTTGAATCATTATAA+GGG + Chr1:94890347-94890366 None:intergenic 25.0%
!! TTTAAACATGATGATGATGA+GGG - Chr1:94889677-94889696 MsG0180005684.01.T01:CDS 25.0%
!! TTTTCCAATATTCGTTTGAT+GGG - Chr1:94890368-94890387 MsG0180005684.01.T01:intron 25.0%
!!! CTGTTAGGTTTTTTTTTTAG+TGG - Chr1:94891491-94891510 MsG0180005684.01.T01:five_prime_UTR 25.0%
!!! GTTAGGTTTTTTTTTTAGTG+GGG - Chr1:94891493-94891512 MsG0180005684.01.T01:five_prime_UTR 25.0%
!!! TACTGTTAATTTGGTTTTGT+GGG + Chr1:94887625-94887644 None:intergenic 25.0%
!!! TATGAGTTTTTTACCGATTT+AGG - Chr1:94891080-94891099 MsG0180005684.01.T01:CDS 25.0%
!!! TTACTGTTAATTTGGTTTTG+TGG + Chr1:94887626-94887645 None:intergenic 25.0%
!!! TTCATTGCTTTTATGTTTTG+CGG - Chr1:94891049-94891068 MsG0180005684.01.T01:CDS 25.0%
!!! TTCTAAAATTCTCATGGTTT+GGG + Chr1:94890528-94890547 None:intergenic 25.0%
!!! TTTCTAAAATTCTCATGGTT+TGG + Chr1:94890529-94890548 None:intergenic 25.0%
!!! TTTTTTTTGTCTCTCAGATA+CGG - Chr1:94889105-94889124 MsG0180005684.01.T01:CDS 25.0%
AACAAGCTGAAAACAACTTA+TGG - Chr1:94888860-94888879 MsG0180005684.01.T01:CDS 30.0%
AGAAAAAAGCAATGCAAGTT+CGG + Chr1:94889874-94889893 None:intergenic 30.0%
ATCAAAGAGCAAGATAGAAT+CGG + Chr1:94890434-94890453 None:intergenic 30.0%
ATGAAAAGGTAATTAATCGG+AGG + Chr1:94888441-94888460 None:intergenic 30.0%
ATTAATGCAAGATGTTCTCT+AGG - Chr1:94888575-94888594 MsG0180005684.01.T01:CDS 30.0%
CAAAATTCAACATACACAGA+TGG - Chr1:94890682-94890701 MsG0180005684.01.T01:intron 30.0%
CATTTGAATCCGATCAATTT+AGG - Chr1:94889636-94889655 MsG0180005684.01.T01:CDS 30.0%
CCTTAAGTGGAACATAAATT+GGG + Chr1:94890236-94890255 None:intergenic 30.0%
CTAAATCTTGCAGTTTCTAT+AGG - Chr1:94889483-94889502 MsG0180005684.01.T01:CDS 30.0%
CTTAAGTGGAACATAAATTG+GGG + Chr1:94890235-94890254 None:intergenic 30.0%
GAACATAAATTGGGGATAAA+GGG + Chr1:94890227-94890246 None:intergenic 30.0%
GTAATAATCAATCAGTACTC+TGG - Chr1:94888666-94888685 MsG0180005684.01.T01:CDS 30.0%
GTTAGAGACGTCAATAAATT+GGG + Chr1:94890263-94890282 None:intergenic 30.0%
TCACCAAACTGAAAAGTAAA+GGG - Chr1:94887651-94887670 MsG0180005684.01.T01:three_prime_UTR 30.0%
TCCTTAAGTGGAACATAAAT+TGG + Chr1:94890237-94890256 None:intergenic 30.0%
TCGATTACAAAAACAAAAGC+GGG + Chr1:94888225-94888244 None:intergenic 30.0%
TGGTCTGTTTATCATTAACT+TGG + Chr1:94889898-94889917 None:intergenic 30.0%
TGTTAGAGACGTCAATAAAT+TGG + Chr1:94890264-94890283 None:intergenic 30.0%
TTCATTCTACGTATAACTTC+AGG - Chr1:94889252-94889271 MsG0180005684.01.T01:CDS 30.0%
TTGATCGGATTCAAATGATT+CGG + Chr1:94889633-94889652 None:intergenic 30.0%
! AACGAATATTGGAAAAGTGT+AGG + Chr1:94890364-94890383 None:intergenic 30.0%
! AATATCTAGAAGTACAGGAA+TGG + Chr1:94890398-94890417 None:intergenic 30.0%
! ATATCTAGAAGTACAGGAAT+GGG + Chr1:94890397-94890416 None:intergenic 30.0%
! CATCTTCAAAACTAGTCTAA+TGG + Chr1:94890908-94890927 None:intergenic 30.0%
! CTTTTCCAATATTCGTTTGA+TGG - Chr1:94890367-94890386 MsG0180005684.01.T01:intron 30.0%
! GTGTAGGTTGAATCATTATA+AGG + Chr1:94890348-94890367 None:intergenic 30.0%
! GTTGAATTTTGTGTAACAGA+TGG + Chr1:94890673-94890692 None:intergenic 30.0%
! GTTTAAACATGATGATGATG+AGG - Chr1:94889676-94889695 MsG0180005684.01.T01:CDS 30.0%
!! AAACCCTTTACTTTTCAGTT+TGG + Chr1:94887657-94887676 None:intergenic 30.0%
!! AAACTGTGCTGGTAATTTTT+AGG - Chr1:94891466-94891485 MsG0180005684.01.T01:CDS 30.0%
!! ACAGCTTTCTAAAATTCTCA+TGG + Chr1:94890534-94890553 None:intergenic 30.0%
!! CTAAACTCACATTCTGAAAT+TGG + Chr1:94889209-94889228 None:intergenic 30.0%
!! GTAAGTAGATTTTAAGGAAG+AGG - Chr1:94890794-94890813 MsG0180005684.01.T01:intron 30.0%
!! TGAGAATTTTAGAAAGCTGT+TGG - Chr1:94890534-94890553 MsG0180005684.01.T01:intron 30.0%
!!! ATTTGTTGCTTTTTGGTGTT+TGG - Chr1:94891629-94891648 MsG0180005684.01.T01:five_prime_UTR 30.0%
!!! GAGTGTTGTTTTGTAAATGT+TGG - Chr1:94889335-94889354 MsG0180005684.01.T01:CDS 30.0%
!!! TTTTTTCTAAGAGACATGCA+AGG + Chr1:94889779-94889798 None:intergenic 30.0%
AATCTTGCAGTTTCTATAGG+CGG - Chr1:94889486-94889505 MsG0180005684.01.T01:CDS 35.0%
ACTACTTATTTCGGATGCAT+TGG - Chr1:94891295-94891314 MsG0180005684.01.T01:CDS 35.0%
AGAATCATGGTATTCACTTC+TGG - Chr1:94889362-94889381 MsG0180005684.01.T01:CDS 35.0%
AGGAAGAGGTTACATGATTT+CGG - Chr1:94890808-94890827 MsG0180005684.01.T01:intron 35.0%
ATTACAAAAACAAAAGCGGG+AGG + Chr1:94888222-94888241 None:intergenic 35.0%
ATTCAACGAAATCCATTGTG+AGG + Chr1:94887858-94887877 None:intergenic 35.0%
ATTGGGTAGAACAAACAAGA+TGG + Chr1:94891392-94891411 None:intergenic 35.0%
CAATCAATTCATCCTCACAA+TGG - Chr1:94887843-94887862 MsG0180005684.01.T01:three_prime_UTR 35.0%
CAATCACTTGACTCCTAAAT+CGG + Chr1:94891096-94891115 None:intergenic 35.0%
CCCAATTTATGTTCCACTTA+AGG - Chr1:94890233-94890252 MsG0180005684.01.T01:intron 35.0%
CCCATTGAAAATGTCATTGT+GGG + Chr1:94889447-94889466 None:intergenic 35.0%
CTACTTATTACATGGTTCCT+TGG - Chr1:94891217-94891236 MsG0180005684.01.T01:CDS 35.0%
CTCACCAAACTGAAAAGTAA+AGG - Chr1:94887650-94887669 MsG0180005684.01.T01:three_prime_UTR 35.0%
CTTCACACTTAGACATTGTT+TGG - Chr1:94888696-94888715 MsG0180005684.01.T01:CDS 35.0%
GAACAATAGTAACCTTATGC+AGG + Chr1:94890937-94890956 None:intergenic 35.0%
GAAGAAGCTTGGTTATGATA+AGG - Chr1:94890501-94890520 MsG0180005684.01.T01:intron 35.0%
GAATCATGGTATTCACTTCT+GGG - Chr1:94889363-94889382 MsG0180005684.01.T01:CDS 35.0%
GACAGTTTCAAACAACAATG+TGG - Chr1:94891330-94891349 MsG0180005684.01.T01:CDS 35.0%
GGAACATAAATTGGGGATAA+AGG + Chr1:94890228-94890247 None:intergenic 35.0%
TAAATTGGGATCTCCTTAAG+TGG + Chr1:94890249-94890268 None:intergenic 35.0%
TATTCAACAGTGGTGTAAGT+AGG + Chr1:94888165-94888184 None:intergenic 35.0%
TCAAAGAGCAAGATAGAATC+GGG + Chr1:94890433-94890452 None:intergenic 35.0%
TCTAAGCATGAATCTAAGCA+AGG + Chr1:94888535-94888554 None:intergenic 35.0%
TCTAGATCAATTGCAGATAC+TGG - Chr1:94890747-94890766 MsG0180005684.01.T01:intron 35.0%
TCTCAACTAAGTAACTAAGC+TGG + Chr1:94888999-94889018 None:intergenic 35.0%
TGAGGTGGTTACTGTTAATT+TGG + Chr1:94887634-94887653 None:intergenic 35.0%
TGGTCACATCTTATAACCTT+TGG + Chr1:94890610-94890629 None:intergenic 35.0%
TTCAACATACACAGATGGTT+CGG - Chr1:94890687-94890706 MsG0180005684.01.T01:intron 35.0%
TTCAGTTTATAACACGGTAC+AGG - Chr1:94889942-94889961 MsG0180005684.01.T01:CDS 35.0%
TTGGGTAGAACAAACAAGAT+GGG + Chr1:94891391-94891410 None:intergenic 35.0%
! AACAAAGAGGTATGAAGTCT+AGG - Chr1:94891247-94891266 MsG0180005684.01.T01:CDS 35.0%
! AAGTAAAGGGTTTAAAGCAC+TGG - Chr1:94887664-94887683 MsG0180005684.01.T01:three_prime_UTR 35.0%
! AATGGATTTCGTTGAATTGG+AGG - Chr1:94887861-94887880 MsG0180005684.01.T01:three_prime_UTR 35.0%
! ACAACACTCTAAAAGACCAA+TGG + Chr1:94889324-94889343 None:intergenic 35.0%
! ACCCACAATGACATTTTCAA+TGG - Chr1:94889443-94889462 MsG0180005684.01.T01:CDS 35.0%
! ATCCGTTTTACCTCTAAGTT+TGG - Chr1:94890151-94890170 MsG0180005684.01.T01:CDS 35.0%
! CACAATGGATTTCGTTGAAT+TGG - Chr1:94887858-94887877 MsG0180005684.01.T01:three_prime_UTR 35.0%
! CCCACAATGACATTTTCAAT+GGG - Chr1:94889444-94889463 MsG0180005684.01.T01:CDS 35.0%
! GAACGAATATCTAGAAGTAC+AGG + Chr1:94890403-94890422 None:intergenic 35.0%
! TCCGTTTTACCTCTAAGTTT+GGG - Chr1:94890152-94890171 MsG0180005684.01.T01:CDS 35.0%
! TGGTTCGGATATCATCTTTA+CGG - Chr1:94890702-94890721 MsG0180005684.01.T01:intron 35.0%
! TGTAACAGATGGATTCAACT+TGG + Chr1:94890662-94890681 None:intergenic 35.0%
!! AAATGTTGGCTCTAGAATCA+TGG - Chr1:94889349-94889368 MsG0180005684.01.T01:CDS 35.0%
!! AGAAGAAGAGTATTCAACAG+TGG + Chr1:94888175-94888194 None:intergenic 35.0%
!! CTGGTTTGTAGTGTATTTTC+AGG - Chr1:94891603-94891622 MsG0180005684.01.T01:five_prime_UTR 35.0%
!! CTTTACTTTTCAGTTTGGTG+AGG + Chr1:94887652-94887671 None:intergenic 35.0%
!! GTTGTTTTCATAAGCTATCC+TGG - Chr1:94888825-94888844 MsG0180005684.01.T01:CDS 35.0%
!!! CAGGTCTATTTGTTGCTTTT+TGG - Chr1:94891622-94891641 MsG0180005684.01.T01:five_prime_UTR 35.0%
!!! GGTAATTTTTAGGTGCTGTT+AGG - Chr1:94891476-94891495 MsG0180005684.01.T01:exon 35.0%
!!! TAAGTAGGTGATTTTGGCTT+GGG - Chr1:94891420-94891439 MsG0180005684.01.T01:CDS 35.0%
!!! TTAAGTAGGTGATTTTGGCT+TGG - Chr1:94891419-94891438 MsG0180005684.01.T01:CDS 35.0%
AAAAGCAATGCAAGTTCGGT+CGG + Chr1:94889870-94889889 None:intergenic 40.0%
AAAGCAACAAGAGCAGTATC+AGG + Chr1:94888315-94888334 None:intergenic 40.0%
AAGAGGTTACATGATTTCGG+CGG - Chr1:94890811-94890830 MsG0180005684.01.T01:intron 40.0%
AAGATGTAGCATCCTGCATA+AGG - Chr1:94890922-94890941 MsG0180005684.01.T01:CDS 40.0%
AAGCCATCTAACAACATCAC+GGG + Chr1:94890119-94890138 None:intergenic 40.0%
AATGTCATTGTGGGTTCTCA+TGG + Chr1:94889438-94889457 None:intergenic 40.0%
ACGAGCGTAAGGGTTTAAAA+CGG + Chr1:94888043-94888062 None:intergenic 40.0%
AGCAATTCCAACTTGGTCAA+GGG + Chr1:94889564-94889583 None:intergenic 40.0%
AGGGATTGTTAGGTCTGATT+TGG + Chr1:94887932-94887951 None:intergenic 40.0%
AGGGTTACGTTGAGAACAAA+AGG + Chr1:94888097-94888116 None:intergenic 40.0%
ATTCCACAGATATTGCTGCT+GGG - Chr1:94890026-94890045 MsG0180005684.01.T01:CDS 40.0%
CAAAGAGCAAGATAGAATCG+GGG + Chr1:94890432-94890451 None:intergenic 40.0%
CAAGCCATCTAACAACATCA+CGG + Chr1:94890120-94890139 None:intergenic 40.0%
CATCTTATAACCTTTGGCAC+TGG + Chr1:94890604-94890623 None:intergenic 40.0%
CCCCAAACTTAGAGGTAAAA+CGG + Chr1:94890156-94890175 None:intergenic 40.0%
CCTAACTAACTACCTGTCTA+AGG + Chr1:94888920-94888939 None:intergenic 40.0%
CCTTAGACAGGTAGTTAGTT+AGG - Chr1:94888917-94888936 MsG0180005684.01.T01:CDS 40.0%
CTAGATCCGTTTCTTGAAAC+TGG + Chr1:94887818-94887837 None:intergenic 40.0%
CTGATGAAACTGCGTATTTC+CGG - Chr1:94890290-94890309 MsG0180005684.01.T01:intron 40.0%
GAAGATAAACGGAAGGAAGA+AGG + Chr1:94890196-94890215 None:intergenic 40.0%
GACTTCATACCTCTTTGTTG+TGG + Chr1:94891246-94891265 None:intergenic 40.0%
GCCCATTGAAAATGTCATTG+TGG + Chr1:94889448-94889467 None:intergenic 40.0%
GGATACAATTATACACCCAC+AGG + Chr1:94891664-94891683 None:intergenic 40.0%
GGGTTACGTTGAGAACAAAA+GGG + Chr1:94888096-94888115 None:intergenic 40.0%
GTAAGTAGGAAAGAGTTCAG+CGG + Chr1:94888151-94888170 None:intergenic 40.0%
GTACCTGATCGGAAGAAAAT+TGG + Chr1:94888419-94888438 None:intergenic 40.0%
TAAGTAGGAAAGAGTTCAGC+GGG + Chr1:94888150-94888169 None:intergenic 40.0%
TAGACAGGTAGTTAGTTAGG+TGG - Chr1:94888920-94888939 MsG0180005684.01.T01:CDS 40.0%
TCCTTGTGGTGATCCATTAT+GGG - Chr1:94890461-94890480 MsG0180005684.01.T01:intron 40.0%
TCGATTACCAATCACGTATC+TGG - Chr1:94888064-94888083 MsG0180005684.01.T01:three_prime_UTR 40.0%
TCTACGTATAACTTCAGGTC+CGG - Chr1:94889257-94889276 MsG0180005684.01.T01:CDS 40.0%
TGAACCATAAATGCAGAGCT+GGG + Chr1:94889926-94889945 None:intergenic 40.0%
TGATGGTTAGAGGGATTGTT+AGG + Chr1:94887942-94887961 None:intergenic 40.0%
TGTTCCAAAACAGGGATTTC+TGG - Chr1:94889181-94889200 MsG0180005684.01.T01:CDS 40.0%
TTCCTTGTGGTGATCCATTA+TGG - Chr1:94890460-94890479 MsG0180005684.01.T01:intron 40.0%
TTTATAACACGGTACAGGCA+GGG - Chr1:94889947-94889966 MsG0180005684.01.T01:CDS 40.0%
! ACACCAATTTTCTTCCGATC+AGG - Chr1:94888413-94888432 MsG0180005684.01.T01:three_prime_UTR 40.0%
! CAATGACATTTTCAATGGGC+AGG - Chr1:94889448-94889467 MsG0180005684.01.T01:CDS 40.0%
! CCGTTTTACCTCTAAGTTTG+GGG - Chr1:94890153-94890172 MsG0180005684.01.T01:CDS 40.0%
! CTTTGATTCGTTCTTCCTTG+TGG - Chr1:94890447-94890466 MsG0180005684.01.T01:intron 40.0%
! TCGTTGTGGACTCTGATTTT+CGG - Chr1:94889408-94889427 MsG0180005684.01.T01:CDS 40.0%
! TTCAGTTTTCTCACTGTTCC+AGG - Chr1:94888370-94888389 MsG0180005684.01.T01:three_prime_UTR 40.0%
! TTCGGATGCATTGGAAGTAT+AGG - Chr1:94891304-94891323 MsG0180005684.01.T01:CDS 40.0%
!! AATAGCTGGTTTCTAGAGTG+TGG - Chr1:94890865-94890884 MsG0180005684.01.T01:intron 40.0%
!! AGGTCTGATTTGGTTGTTGA+TGG + Chr1:94887922-94887941 None:intergenic 40.0%
!! ATTAATCGGAGGTACCTGAT+CGG + Chr1:94888430-94888449 None:intergenic 40.0%
!! CTGCTAGCATTTTGTTTCCA+GGG - Chr1:94891547-94891566 MsG0180005684.01.T01:five_prime_UTR 40.0%
!! TACTTTTCAGTTTGGTGAGG+TGG + Chr1:94887649-94887668 None:intergenic 40.0%
!!! AGAAATCCCTGTTTTGGAAC+AGG + Chr1:94889182-94889201 None:intergenic 40.0%
!!! GTTTTTTTTTTAGTGGGGCG+TGG - Chr1:94891498-94891517 MsG0180005684.01.T01:five_prime_UTR 40.0%
!!! TGTTTTTTCTGGTGTGTTGC+TGG - Chr1:94891522-94891541 MsG0180005684.01.T01:five_prime_UTR 40.0%
AAACCCAGCAGCAATATCTG+TGG + Chr1:94890032-94890051 None:intergenic 45.0%
AACACAGCCTGTTCCAAAAC+AGG - Chr1:94889172-94889191 MsG0180005684.01.T01:CDS 45.0%
AACTACCTGTCTAAGGACGT+AGG + Chr1:94888913-94888932 None:intergenic 45.0%
AACTGTTCTGCATCCAGTTC+TGG + Chr1:94890565-94890584 None:intergenic 45.0%
ACACAGCCTGTTCCAAAACA+GGG - Chr1:94889173-94889192 MsG0180005684.01.T01:CDS 45.0%
ACCATGCAAAAGAACGATCC+TGG + Chr1:94888391-94888410 None:intergenic 45.0%
ACTACCTGTCTAAGGACGTA+GGG + Chr1:94888912-94888931 None:intergenic 45.0%
AGAACTGGATGCAGAACAGT+TGG - Chr1:94890564-94890583 MsG0180005684.01.T01:intron 45.0%
AGTCTAGGAGTGGTGAAGAA+AGG - Chr1:94891262-94891281 MsG0180005684.01.T01:CDS 45.0%
ATGAATTCCATGACCAACGG+AGG + Chr1:94887897-94887916 None:intergenic 45.0%
ATGCCCGTGATGTTGTTAGA+TGG - Chr1:94890113-94890132 MsG0180005684.01.T01:CDS 45.0%
ATGTGACCAGCATAGTAGTC+AGG - Chr1:94890621-94890640 MsG0180005684.01.T01:intron 45.0%
ATTGCTCAGTGGAAGAAGCT+TGG - Chr1:94890490-94890509 MsG0180005684.01.T01:intron 45.0%
CAAGATAGAATCGGGGCAAA+TGG + Chr1:94890425-94890444 None:intergenic 45.0%
CACATAGTCCCCAAACTTAG+AGG + Chr1:94890164-94890183 None:intergenic 45.0%
CAGCAATTCCAACTTGGTCA+AGG + Chr1:94889565-94889584 None:intergenic 45.0%
CAGCAGCAATATCTGTGGAA+TGG + Chr1:94890027-94890046 None:intergenic 45.0%
CATTCCACAGATATTGCTGC+TGG - Chr1:94890025-94890044 MsG0180005684.01.T01:CDS 45.0%
CCTTGGAAACCACAACAAAG+AGG - Chr1:94891234-94891253 MsG0180005684.01.T01:CDS 45.0%
CGGAAATACGCAGTTTCATC+AGG + Chr1:94890292-94890311 None:intergenic 45.0%
CTGAACCATAAATGCAGAGC+TGG + Chr1:94889927-94889946 None:intergenic 45.0%
CTTCTTCCACTGAGCAATCT+TGG + Chr1:94890488-94890507 None:intergenic 45.0%
GAAGCTCAGCAATTCCAACT+TGG + Chr1:94889571-94889590 None:intergenic 45.0%
GAGCAATCTTGGACCCATAA+TGG + Chr1:94890477-94890496 None:intergenic 45.0%
GCCATGAATTCCATGACCAA+CGG + Chr1:94887900-94887919 None:intergenic 45.0%
GTCAAAATTTCGGGAGCTCT+TGG - Chr1:94889752-94889771 MsG0180005684.01.T01:CDS 45.0%
GTGGCCCATCAAACGAATAT+TGG + Chr1:94890375-94890394 None:intergenic 45.0%
GTGTGCACATGATGGTTAGA+GGG + Chr1:94887951-94887970 None:intergenic 45.0%
GTTGAATTGGAGGCAGTAGA+AGG - Chr1:94887871-94887890 MsG0180005684.01.T01:three_prime_UTR 45.0%
GTTTATAACACGGTACAGGC+AGG - Chr1:94889946-94889965 MsG0180005684.01.T01:CDS 45.0%
TCCGTTGGTCATGGAATTCA+TGG - Chr1:94887896-94887915 MsG0180005684.01.T01:three_prime_UTR 45.0%
TGATCAAGAAGCAGCAGCTT+CGG - Chr1:94890051-94890070 MsG0180005684.01.T01:CDS 45.0%
TGCAAAGGAGAGGATCGTAA+GGG + Chr1:94888008-94888027 None:intergenic 45.0%
TGTATTCAACTTCCACACGC+AGG + Chr1:94889843-94889862 None:intergenic 45.0%
TTATAACACGGTACAGGCAG+GGG - Chr1:94889948-94889967 MsG0180005684.01.T01:CDS 45.0%
! AACGGTAGTGTGCTGTTGTT+CGG + Chr1:94887737-94887756 None:intergenic 45.0%
! AAGCTATCCTGGAGTGCTTA+CGG - Chr1:94888836-94888855 MsG0180005684.01.T01:CDS 45.0%
! AGAGGTATGAAGTCTAGGAG+TGG - Chr1:94891252-94891271 MsG0180005684.01.T01:CDS 45.0%
! CCTCTTTGTTGTGGTTTCCA+AGG + Chr1:94891237-94891256 None:intergenic 45.0%
! GGAACCAGAAATCCCTGTTT+TGG + Chr1:94889188-94889207 None:intergenic 45.0%
! TCCAGGATCGTTCTTTTGCA+TGG - Chr1:94888387-94888406 MsG0180005684.01.T01:three_prime_UTR 45.0%
! TCTAGAAGTACAGGAATGGG+TGG + Chr1:94890394-94890413 None:intergenic 45.0%
!! ACCCATAATGGATCACCACA+AGG + Chr1:94890465-94890484 None:intergenic 45.0%
!! CATTTTGTTTCCAGGGACAG+AGG - Chr1:94891554-94891573 MsG0180005684.01.T01:five_prime_UTR 45.0%
!! GCTGCTAGCATTTTGTTTCC+AGG - Chr1:94891546-94891565 MsG0180005684.01.T01:five_prime_UTR 45.0%
!!! GGTGTTTTGAGAAACTGTGC+TGG - Chr1:94891455-94891474 MsG0180005684.01.T01:CDS 45.0%
!!! GTTGCTTTTTGGTGTTTGGC+TGG - Chr1:94891633-94891652 MsG0180005684.01.T01:five_prime_UTR 45.0%
!!! TAGGTGATTTTGGCTTGGGT+GGG - Chr1:94891424-94891443 MsG0180005684.01.T01:CDS 45.0%
AAATGCAGAGCTGGGCTGAA+TGG + Chr1:94889918-94889937 None:intergenic 50.0%
ACCAGCATAGTAGTCAGGCT+AGG - Chr1:94890626-94890645 MsG0180005684.01.T01:intron 50.0%
ACCTAGCCTGACTACTATGC+TGG + Chr1:94890630-94890649 None:intergenic 50.0%
ACTGGATGCAGAACAGTTGG+TGG - Chr1:94890567-94890586 MsG0180005684.01.T01:intron 50.0%
AGAAGCAGCAGCTTCGGTTA+TGG - Chr1:94890057-94890076 MsG0180005684.01.T01:CDS 50.0%
AGAGAGTGGTGTGCACATGA+TGG + Chr1:94887959-94887978 None:intergenic 50.0%
AGAGGATCGTAAGGGAGAAG+AGG + Chr1:94888000-94888019 None:intergenic 50.0%
AGCTGAAATTGCAGCTCCAG+TGG + Chr1:94889300-94889319 None:intergenic 50.0%
ATGGGTCCAAGATTGCTCAG+TGG - Chr1:94890479-94890498 MsG0180005684.01.T01:intron 50.0%
CCCTCGCCAGTTTCAAGAAA+CGG - Chr1:94887809-94887828 MsG0180005684.01.T01:three_prime_UTR 50.0%
CCGTTTCTTGAAACTGGCGA+GGG + Chr1:94887812-94887831 None:intergenic 50.0%
CGGAAGGAAGAAGGATCTTC+TGG + Chr1:94890187-94890206 None:intergenic 50.0%
GACAGTGCCAGATACGTGAT+TGG + Chr1:94888074-94888093 None:intergenic 50.0%
GATCGTAAGGGAGAAGAGGT+AGG + Chr1:94887996-94888015 None:intergenic 50.0%
GCTGCAATTTCAGCTGCCAT+TGG - Chr1:94889305-94889324 MsG0180005684.01.T01:CDS 50.0%
GGTAATCGAGACGAGCGTAA+GGG + Chr1:94888053-94888072 None:intergenic 50.0%
GGTGTGCACATGATGGTTAG+AGG + Chr1:94887952-94887971 None:intergenic 50.0%
GTGCAAAGGAGAGGATCGTA+AGG + Chr1:94888009-94888028 None:intergenic 50.0%
GTGTTTGTCCAGTATGCAGC+TGG + Chr1:94889157-94889176 None:intergenic 50.0%
TACAAACCAGCAGCGACAGA+GGG + Chr1:94891593-94891612 None:intergenic 50.0%
TCAGCCCAGCTCTGCATTTA+TGG - Chr1:94889919-94889938 MsG0180005684.01.T01:CDS 50.0%
TCCGTTTCTTGAAACTGGCG+AGG + Chr1:94887813-94887832 None:intergenic 50.0%
TGCACACCACTCTCTCAACA+CGG - Chr1:94887964-94887983 MsG0180005684.01.T01:three_prime_UTR 50.0%
TGGTAATCGAGACGAGCGTA+AGG + Chr1:94888054-94888073 None:intergenic 50.0%
TGTTGTTCGGCAGTGGCTTA+TGG + Chr1:94887724-94887743 None:intergenic 50.0%
TTCAGCGGGAAGATTAGCGT+CGG + Chr1:94888136-94888155 None:intergenic 50.0%
TTGCAGATACTGGCAGTGCA+AGG - Chr1:94890757-94890776 MsG0180005684.01.T01:intron 50.0%
! GTTTGGCTGGTTCATCCTGT+GGG - Chr1:94891646-94891665 MsG0180005684.01.T01:five_prime_UTR 50.0%
! TGGACGAGATGGTGGTTCAA+CGG + Chr1:94887781-94887800 None:intergenic 50.0%
! TGTTTGGCTGGTTCATCCTG+TGG - Chr1:94891645-94891664 MsG0180005684.01.T01:five_prime_UTR 50.0%
!! AGAACAGTTGGTGGCTGAAC+GGG - Chr1:94890576-94890595 MsG0180005684.01.T01:intron 50.0%
!! CAGAACAGTTGGTGGCTGAA+CGG - Chr1:94890575-94890594 MsG0180005684.01.T01:intron 50.0%
!! TCTATAGGCGGATTGCGAAG+AGG - Chr1:94889498-94889517 MsG0180005684.01.T01:CDS 50.0%
!!! AGGTGATTTTGGCTTGGGTG+GGG - Chr1:94891425-94891444 MsG0180005684.01.T01:CDS 50.0%
!!! GTAGGTGATTTTGGCTTGGG+TGG - Chr1:94891423-94891442 MsG0180005684.01.T01:CDS 50.0%
AAATCCACCCGAGCGCTCAA+TGG + Chr1:94889600-94889619 None:intergenic 55.0%
AACAGAACAGCCTCTGTCCC+TGG + Chr1:94891567-94891586 None:intergenic 55.0%
AATCCACCCGAGCGCTCAAT+GGG + Chr1:94889599-94889618 None:intergenic 55.0%
ACACGTCTCTGCTCGGAGAA+TGG + Chr1:94890092-94890111 None:intergenic 55.0%
ACTTCTGGGCCTGCTACTCT+TGG - Chr1:94889377-94889396 MsG0180005684.01.T01:CDS 55.0%
AGTCCAGGTCCAAGAGTAGC+AGG + Chr1:94889389-94889408 None:intergenic 55.0%
AGTGAGACCGAGGTTGGACA+AGG - Chr1:94889812-94889831 MsG0180005684.01.T01:CDS 55.0%
ATTGCAGCTCCAGTGGACCT+CGG + Chr1:94889293-94889312 None:intergenic 55.0%
CAGTATGCAGCTGGTGTGGA+CGG + Chr1:94889148-94889167 None:intergenic 55.0%
CCTCTCCTTTGCACTCGATG+CGG - Chr1:94888015-94888034 MsG0180005684.01.T01:three_prime_UTR 55.0%
CTACAAACCAGCAGCGACAG+AGG + Chr1:94891594-94891613 None:intergenic 55.0%
CTCTCCCTACGTCCTTAGAC+AGG - Chr1:94888905-94888924 MsG0180005684.01.T01:CDS 55.0%
CTGAACCGCGAAGGAGTAGT+TGG - Chr1:94890319-94890338 MsG0180005684.01.T01:intron 55.0%
CTTCGCGGTTCAGCATAAGC+CGG + Chr1:94890312-94890331 None:intergenic 55.0%
CTTGTTGCCGTAAGCACTCC+AGG + Chr1:94888846-94888865 None:intergenic 55.0%
GCTGTTGGAAGCTCCAGAAC+TGG - Chr1:94890549-94890568 MsG0180005684.01.T01:intron 55.0%
GCTTGCTCCCTTGACCAAGT+TGG - Chr1:94889554-94889573 MsG0180005684.01.T01:CDS 55.0%
GGGATCCAACTACTCCTTCG+CGG + Chr1:94890327-94890346 None:intergenic 55.0%
GGTACCACCTTGTCCAACCT+CGG + Chr1:94889822-94889841 None:intergenic 55.0%
GGTGTGGACGGCTAATGTTC+AGG + Chr1:94889136-94889155 None:intergenic 55.0%
GGTGTGGGTAGAGGAGGAAA+CGG + Chr1:94887755-94887774 None:intergenic 55.0%
TAGAAGGCCTCCGTTGGTCA+TGG - Chr1:94887887-94887906 MsG0180005684.01.T01:three_prime_UTR 55.0%
TCAGAGTCCACAACGAGTCC+AGG + Chr1:94889404-94889423 None:intergenic 55.0%
TCAGTGAGTGAGACCGAGGT+TGG - Chr1:94889806-94889825 MsG0180005684.01.T01:CDS 55.0%
TCAGTGCCGTGTTGAGAGAG+TGG + Chr1:94887973-94887992 None:intergenic 55.0%
TCGAGAACCCATTGAGCGCT+CGG - Chr1:94889589-94889608 MsG0180005684.01.T01:CDS 55.0%
TCTTGAAACTGGCGAGGGAG+AGG + Chr1:94887807-94887826 None:intergenic 55.0%
TCTTGGACCTGGACTCGTTG+TGG - Chr1:94889394-94889413 MsG0180005684.01.T01:CDS 55.0%
TGTCCAGTATGCAGCTGGTG+TGG + Chr1:94889152-94889171 None:intergenic 55.0%
TGTTCGGCAGTGGCTTATGG+TGG + Chr1:94887721-94887740 None:intergenic 55.0%
! ACGAGATGGTGGTTCAACGG+CGG + Chr1:94887778-94887797 None:intergenic 55.0%
! AGTGTGCTGTTGTTCGGCAG+TGG + Chr1:94887731-94887750 None:intergenic 55.0%
! ATGGTGGTGCGTACGTTGGA+CGG + Chr1:94887705-94887724 None:intergenic 55.0%
! GCTTATGGTGGTGCGTACGT+TGG + Chr1:94887709-94887728 None:intergenic 55.0%
! TGAACGGGTTCCAGTGCCAA+AGG - Chr1:94890591-94890610 MsG0180005684.01.T01:intron 55.0%
!! AGAGGTGATGGACGAGATGG+TGG + Chr1:94887789-94887808 None:intergenic 55.0%
!!! TGGGGCGTGGCTGTTTTTTC+TGG - Chr1:94891511-94891530 MsG0180005684.01.T01:five_prime_UTR 55.0%
AACCCATCGTCGTGCAGCAG+TGG + Chr1:94889999-94890018 None:intergenic 60.0%
AACTGGCGAGGGAGAGGTGA+TGG + Chr1:94887801-94887820 None:intergenic 60.0%
ACGGTACAGGCAGGGGAACA+TGG - Chr1:94889955-94889974 MsG0180005684.01.T01:CDS 60.0%
AGGCAGTAGAAGGCCTCCGT+TGG - Chr1:94887881-94887900 MsG0180005684.01.T01:three_prime_UTR 60.0%
CACCACTGCTGCACGACGAT+GGG - Chr1:94889994-94890013 MsG0180005684.01.T01:CDS 60.0%
CCGCATCGAGTGCAAAGGAG+AGG + Chr1:94888018-94888037 None:intergenic 60.0%
CGAGAACCCATTGAGCGCTC+GGG - Chr1:94889590-94889609 MsG0180005684.01.T01:CDS 60.0%
CGCTTCAGTGAGTGAGACCG+AGG - Chr1:94889802-94889821 MsG0180005684.01.T01:CDS 60.0%
CGGCTTATGCTGAACCGCGA+AGG - Chr1:94890310-94890329 MsG0180005684.01.T01:intron 60.0%
CGGTACAGGCAGGGGAACAT+GGG - Chr1:94889956-94889975 MsG0180005684.01.T01:CDS 60.0%
CGTCCACACCAGCTGCATAC+TGG - Chr1:94889146-94889165 MsG0180005684.01.T01:CDS 60.0%
GACAAGGTGGTACCTGCGTG+TGG - Chr1:94889828-94889847 MsG0180005684.01.T01:CDS 60.0%
GAGACCGAGGTTGGACAAGG+TGG - Chr1:94889815-94889834 MsG0180005684.01.T01:CDS 60.0%
GGGCATGACACGTCTCTGCT+CGG + Chr1:94890099-94890118 None:intergenic 60.0%
TCACCACTGCTGCACGACGA+TGG - Chr1:94889993-94890012 MsG0180005684.01.T01:CDS 60.0%
TTGCAGCTCCAGTGGACCTC+GGG + Chr1:94889292-94889311 None:intergenic 60.0%
! CGAGATGGTGGTTCAACGGC+GGG + Chr1:94887777-94887796 None:intergenic 60.0%
! GAGATGGTGGTTCAACGGCG+GGG + Chr1:94887776-94887795 None:intergenic 60.0%
! GTTTTGCCCTCTGTCGCTGC+TGG - Chr1:94891584-94891603 MsG0180005684.01.T01:five_prime_UTR 60.0%
! TGAGCGCTCGGGTGGATTTG+TGG - Chr1:94889601-94889620 MsG0180005684.01.T01:CDS 60.0%
! TGGCTTGGGTGGGGACTTCT+AGG - Chr1:94891434-94891453 MsG0180005684.01.T01:CDS 60.0%
!! GGGAAGATTAGCGTCGGCGA+TGG + Chr1:94888130-94888149 None:intergenic 60.0%
!! GGGAGAGGTGATGGACGAGA+TGG + Chr1:94887792-94887811 None:intergenic 60.0%
CGGCGATGGAGCGAGGGAAA+GGG + Chr1:94888116-94888135 None:intergenic 65.0%
GAACCCATTGAGCGCTCGGG+TGG - Chr1:94889593-94889612 MsG0180005684.01.T01:CDS 65.0%
GGGCCTGCTACTCTTGGACC+TGG - Chr1:94889383-94889402 MsG0180005684.01.T01:CDS 65.0%
GTGGTTCAACGGCGGGGTGT+GGG + Chr1:94887770-94887789 None:intergenic 65.0%
TCGGCGATGGAGCGAGGGAA+AGG + Chr1:94888117-94888136 None:intergenic 65.0%
TGCAGCTCCAGTGGACCTCG+GGG + Chr1:94889291-94889310 None:intergenic 65.0%
!! TAAAGCACTGGCGCCGTCGC+AGG - Chr1:94887676-94887695 MsG0180005684.01.T01:three_prime_UTR 65.0%
!! TAGCGTCGGCGATGGAGCGA+GGG + Chr1:94888122-94888141 None:intergenic 65.0%
!! TTAGCGTCGGCGATGGAGCG+AGG + Chr1:94888123-94888142 None:intergenic 65.0%
CAACGGCGGGGTGTGGGTAG+AGG + Chr1:94887764-94887783 None:intergenic 70.0%
CGGCGCCGCATCGAGTGCAA+AGG + Chr1:94888023-94888042 None:intergenic 70.0%
CGTTGGACGGCAGCCTGCGA+CGG + Chr1:94887692-94887711 None:intergenic 70.0%
CTCCAGTGGACCTCGGGGGA+CGG + Chr1:94889286-94889305 None:intergenic 70.0%
GCAGCTCCAGTGGACCTCGG+GGG + Chr1:94889290-94889309 None:intergenic 70.0%
GGTGGTTCAACGGCGGGGTG+TGG + Chr1:94887771-94887790 None:intergenic 70.0%
AGCCGTCCCCCGAGGTCCAC+TGG - Chr1:94889281-94889300 MsG0180005684.01.T01:CDS 75.0%
CGGCGGGGTGTGGGTAGAGG+AGG + Chr1:94887761-94887780 None:intergenic 75.0%
GGACCTCGGGGGACGGCTTC+CGG + Chr1:94889279-94889298 None:intergenic 75.0%
! GGTCCGGAAGCCGTCCCCCG+AGG - Chr1:94889273-94889292 MsG0180005684.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 94887612 94891739 94887612 ID=MsG0180005684.01;Name=MsG0180005684.01
Chr1 mRNA 94887612 94891739 94887612 ID=MsG0180005684.01.T01;Parent=MsG0180005684.01;Name=MsG0180005684.01.T01;_AED=0.14;_eAED=0.14;_QI=250|1|1|1|1|1|2|956|744
Chr1 exon 94887612 94890229 94887612 ID=MsG0180005684.01.T01:exon:10324;Parent=MsG0180005684.01.T01
Chr1 exon 94890917 94891739 94890917 ID=MsG0180005684.01.T01:exon:10323;Parent=MsG0180005684.01.T01
Chr1 five_prime_UTR 94891490 94891739 94891490 ID=MsG0180005684.01.T01:five_prime_utr;Parent=MsG0180005684.01.T01
Chr1 CDS 94890917 94891489 94890917 ID=MsG0180005684.01.T01:cds;Parent=MsG0180005684.01.T01
Chr1 CDS 94888568 94890229 94888568 ID=MsG0180005684.01.T01:cds;Parent=MsG0180005684.01.T01
Chr1 three_prime_UTR 94887612 94888567 94887612 ID=MsG0180005684.01.T01:three_prime_utr;Parent=MsG0180005684.01.T01
Gene Sequence

>MsG0180005684.01.T01

ATGGATTTCGTTGAATTGGAGGCAGTAGAAGGCCTCCGTTGGTCATGGAATTCATGGCCATCAACAACCAAATCAGACCTAACAATCCCTCTAACCATCATGTGCACACCACTCTCTCAACACGGCACTGACCTACCTCTTCTCCCTTACGATCCTCTCCTTTGCACTCGATGCGGCGCCGTTTTAAACCCTTACGCTCGTCTCGATTACCAATCACGTATCTGGCACTGTCCCTTTTGTTCTCAACGTAACCCTTTCCCTCGCTCCATCGCCGACGCTAATCTTCCCGCTGAACTCTTTCCTACTTACACCACTGTTGAATACTCTTCTTCTTCTTCTTCTTCTTCACTTTTTCATCCTCCCGCTTTTGTTTTTGTAATCGATGTTTCAACTTCTCAAGATGAGCTTTGTTCACTTAAGAATGAAATTTTGCTTCTTCTTCATCATTTGCCTGATACTGCTCTTGTTGCTTTGATTACGTTTGATTCAATGGTTTATCTTCATGATATTCAGTTTTCTCACTGTTCCAGGATCGTTCTTTTGCATGGTGAACACCAATTTTCTTCCGATCAGATACGGCAGTTCCTGAACATTAGCCGTCCACACCAGCTGCATACTGGACAAACACAGCCTGTTCCAAAACAGGGATTTCTGGTTCCAATTTCAGAATGTGAGTTTAGTATCACAGCTGCAATTGAAGATATTCATTCTACGTATAACTTCAGGTCCGGAAGCCGTCCCCCGAGGTCCACTGGAGCTGCAATTTCAGCTGCCATTGGTCTTTTAGAGTGTTGTTTTGTAAATGTTGGCTCTAGAATCATGGTATTCACTTCTGGGCCTGCTACTCTTGGACCTGGACTCGTTGTGGACTCTGATTTTCGGCAATCCATGAGAACCCACAATGACATTTTCAATGGGCAGGCGAGACATCATTCTAAATCTTGCAGTTTCTATAGGCGGATTGCGAAGAGGCTGTCTGATGCGTCTGTAGTTCTTGATCTGTTTGCTTGCTCCCTTGACCAAGTTGGAATTGCTGAGCTTCGAGAACCCATTGAGCGCTCGGGTGGATTTGTGGTTCTTGCCGAATCATTTGAATCCGATCAATTTAGGAAATGTCTAAGGCACTTGTTTAAACATGATGATGATGAGGGATTTTTGAAGATGAATTTTGATGCAACCATTGAAATAGTGACTACTATTGATGTCAAAATTTCGGGAGCTCTTGGACCTTGCATGTCTCTTAGAAAAAAGAACGCTTCAGTGAGTGAGACCGAGGTTGGACAAGGTGGTACCTGCGTGTGGAAGTTGAATACACTCACCGACCGAACTTGCATTGCTTTTTTCTTCCAAGTTAATGATAAACAGACCATTCAGCCCAGCTCTGCATTTATGGTTCAGTTTATAACACGGTACAGGCAGGGGAACATGGGTCTCAGAAAAAGAGTCACCACTGCTGCACGACGATGGGTTGCAAACCATTCCACAGATATTGCTGCTGGGTTTGATCAAGAAGCAGCAGCTTCGGTTATGGCAAGACTTGCCATTCTCCGAGCAGAGACGTGTCATGCCCGTGATGTTGTTAGATGGCTTGATGACACACTTATCCGTTTTACCTCTAAGTTTGGGGACTATGTGCCAGAAGATCCTTCTTCCTTCCGTTTATCTTCAAATTTTTCCCTTTATCCCCAATTTATGTTCCACTTAAGGAGATCCCAATTTATTGACGTCTCTAACACTACTCCTGATGAAACTGCGTATTTCCGGCTTATGCTGAACCGCGAAGGAGTAGTTGGATCCCTTATAATGATTCAACCTACACTTTTCCAATATTCGTTTGATGGGCCACCCATTCCTGTACTTCTAGATATTCGTTCCATTTGCCCCGATTCTATCTTGCTCTTTGATTCGTTCTTCCTTGTGGTGATCCATTATGGGTCCAAGATTGCTCAGTGGAAGAAGCTTGGTTATGATAAGGACCCAAACCATGAGAATTTTAGAAAGCTGTTGGAAGCTCCAGAACTGGATGCAGAACAGTTGGTGGCTGAACGGGTTCCAGTGCCAAAGGTTATAAGATGTGACCAGCATAGTAGTCAGGCTAGGTTTCTTCTTGCCAAGTTGAATCCATCTGTTACACAAAATTCAACATACACAGATGGTTCGGATATCATCTTTACGGATGACTTGAGCTTGCAAGTTTTTCTAGATCAATTGCAGATACTGGCAGTGCAAGGCTGA
Protein sequence

>MsG0180005684.01.T01

MDFVELEAVEGLRWSWNSWPSTTKSDLTIPLTIMCTPLSQHGTDLPLLPYDPLLCTRCGAVLNPYARLDYQSRIWHCPFCSQRNPFPRSIADANLPAELFPTYTTVEYSSSSSSSSLFHPPAFVFVIDVSTSQDELCSLKNEILLLLHHLPDTALVALITFDSMVYLHDIQFSHCSRIVLLHGEHQFSSDQIRQFLNISRPHQLHTGQTQPVPKQGFLVPISECEFSITAAIEDIHSTYNFRSGSRPPRSTGAAISAAIGLLECCFVNVGSRIMVFTSGPATLGPGLVVDSDFRQSMRTHNDIFNGQARHHSKSCSFYRRIAKRLSDASVVLDLFACSLDQVGIAELREPIERSGGFVVLAESFESDQFRKCLRHLFKHDDDEGFLKMNFDATIEIVTTIDVKISGALGPCMSLRKKNASVSETEVGQGGTCVWKLNTLTDRTCIAFFFQVNDKQTIQPSSAFMVQFITRYRQGNMGLRKRVTTAARRWVANHSTDIAAGFDQEAAASVMARLAILRAETCHARDVVRWLDDTLIRFTSKFGDYVPEDPSSFRLSSNFSLYPQFMFHLRRSQFIDVSNTTPDETAYFRLMLNREGVVGSLIMIQPTLFQYSFDGPPIPVLLDIRSICPDSILLFDSFFLVVIHYGSKIAQWKKLGYDKDPNHENFRKLLEAPELDAEQLVAERVPVPKVIRCDQHSSQARFLLAKLNPSVTQNSTYTDGSDIIFTDDLSLQVFLDQLQILAVQG*