AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005725.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005725.01.T01 MTR_1g105920 93.077 130 9 0 1 130 1 130 1.86e-85 249
MsG0180005725.01.T01 MTR_1g105910 93.077 130 9 0 1 130 1 130 4.50e-85 248
MsG0180005725.01.T01 MTR_3g052870 94.444 126 7 0 1 126 1 126 2.45e-84 246
MsG0180005725.01.T01 MTR_8g043650 92.308 130 10 0 1 130 1 130 4.11e-84 246
MsG0180005725.01.T01 MTR_1g012570 90.698 129 12 0 1 129 1 129 5.09e-83 243
MsG0180005725.01.T01 MTR_3g052920 87.692 130 16 0 1 130 1 130 7.65e-81 237
MsG0180005725.01.T01 MTR_1g106070 87.692 130 16 0 1 130 1 130 3.76e-80 234
MsG0180005725.01.T01 MTR_2g030740 86.923 130 17 0 1 130 1 130 1.61e-78 231
MsG0180005725.01.T01 MTR_1g108510 80.000 130 26 0 1 130 1 130 9.98e-73 216
MsG0180005725.01.T01 MTR_3g030770 80.000 130 26 0 1 130 1 130 4.09e-72 215
MsG0180005725.01.T01 MTR_1g105905 89.381 113 12 0 18 130 1 113 1.33e-70 211
MsG0180005725.01.T01 MTR_2g093190 76.923 130 30 0 1 130 1 130 6.79e-68 204
MsG0180005725.01.T01 MTR_1g108580 76.154 130 31 0 1 130 1 130 8.93e-68 204
MsG0180005725.01.T01 MTR_0121s0100 75.000 128 32 0 1 128 1 128 2.77e-67 199
MsG0180005725.01.T01 MTR_5g045560 74.219 128 33 0 1 128 1 128 9.75e-66 199
MsG0180005725.01.T01 MTR_1g075600 74.219 128 33 0 1 128 1 128 4.80e-65 197
MsG0180005725.01.T01 MTR_1g077360 71.875 128 36 0 1 128 1 128 1.65e-64 196
MsG0180005725.01.T01 MTR_3g030780 72.868 129 35 0 1 129 1 129 3.30e-64 192
MsG0180005725.01.T01 MTR_0121s0080 75.194 129 32 0 1 129 1 129 3.67e-63 192
MsG0180005725.01.T01 MTR_2g085280 70.312 128 38 0 1 128 1 128 1.02e-62 191
MsG0180005725.01.T01 MTR_2g085250 70.312 128 38 0 1 128 1 128 1.10e-62 191
MsG0180005725.01.T01 MTR_5g055100 69.291 127 39 0 1 127 1 127 2.37e-61 188
MsG0180005725.01.T01 MTR_5g053390 67.969 128 41 0 1 128 1 128 3.48e-57 177
MsG0180005725.01.T01 MTR_3g080940 62.602 123 46 0 7 129 7 129 1.38e-53 167
MsG0180005725.01.T01 MTR_3g067910 64.078 103 37 0 21 123 2 104 1.67e-45 144
MsG0180005725.01.T01 MTR_7g062350 66.972 109 35 1 16 123 27 135 1.02e-44 146
MsG0180005725.01.T01 MTR_1g075570 61.261 111 29 1 18 128 1 97 1.23e-40 133
MsG0180005725.01.T01 MTR_2g105290 42.520 127 63 2 5 128 8 127 1.11e-33 115
MsG0180005725.01.T01 MTR_8g086290 43.307 127 62 2 5 128 8 127 2.48e-32 112
MsG0180005725.01.T01 MTR_7g028448 47.200 125 58 2 5 129 8 124 2.35e-31 109
MsG0180005725.01.T01 MTR_4g036915 47.200 125 58 2 5 129 8 124 2.35e-31 109
MsG0180005725.01.T01 MTR_1g108500 60.825 97 17 1 22 118 110 185 3.00e-30 111
MsG0180005725.01.T01 MTR_3g067875 82.143 56 10 0 18 73 1 56 7.60e-30 102
MsG0180005725.01.T01 MTR_4g127140 43.307 127 62 2 5 128 8 127 3.32e-27 99.8
MsG0180005725.01.T01 MTR_3g067870 69.841 63 19 0 16 78 83 145 7.09e-26 95.5
MsG0180005725.01.T01 MTR_1g047550 57.971 69 29 0 9 77 2 70 1.75e-24 92.8
MsG0180005725.01.T01 MTR_1g063160 42.342 111 61 2 9 118 2 110 3.64e-24 91.7
MsG0180005725.01.T01 MTR_8g051580 40.800 125 69 2 9 130 2 124 4.44e-24 91.7
MsG0180005725.01.T01 MTR_8g079502 42.857 112 59 3 9 118 2 110 5.94e-24 91.3
MsG0180005725.01.T01 MTR_3g067915 61.194 67 26 0 60 126 30 96 1.45e-23 87.8
MsG0180005725.01.T01 MTR_1g054265 41.593 113 64 1 9 121 2 112 2.22e-23 89.4
MsG0180005725.01.T01 MTR_8g046350 38.889 126 68 3 9 130 2 122 4.40e-23 88.6
MsG0180005725.01.T01 MTR_4g131030 37.302 126 63 4 9 118 2 127 5.05e-23 89.7
MsG0180005725.01.T01 MTR_4g094632 39.623 106 62 1 9 114 2 105 3.27e-21 83.6
MsG0180005725.01.T01 MTR_4g094638 39.623 106 63 1 9 113 2 107 8.27e-20 80.5
MsG0180005725.01.T01 MTR_3g005530 50.000 68 34 0 9 76 2 69 2.34e-18 77.8
MsG0180005725.01.T01 MTR_1g053070 42.574 101 57 1 9 108 2 102 2.92e-18 77.8
MsG0180005725.01.T01 MTR_4g102530 47.945 73 38 0 10 82 3 75 4.88e-18 76.6
MsG0180005725.01.T01 MTR_3g452380 40.566 106 53 1 3 108 11 106 5.14e-18 77.4
MsG0180005725.01.T01 MTR_4g093970 53.030 66 31 0 10 75 29 94 8.38e-18 76.6
MsG0180005725.01.T01 MTR_5g066180 48.529 68 35 0 9 76 2 69 4.83e-17 74.3
MsG0180005725.01.T01 MTR_8g033270 48.529 68 35 0 9 76 2 69 9.96e-17 73.9
MsG0180005725.01.T01 MTR_1g101970 47.059 68 36 0 9 76 2 69 1.08e-16 72.8
MsG0180005725.01.T01 MTR_2g017865 37.273 110 68 1 9 118 17 125 1.73e-16 73.6
MsG0180005725.01.T01 MTR_8g033220 44.872 78 43 0 10 87 3 80 2.06e-16 72.8
MsG0180005725.01.T01 MTR_8g033220 44.872 78 43 0 10 87 3 80 2.19e-16 72.8
MsG0180005725.01.T01 MTR_4g109830 44.928 69 37 1 9 76 2 70 2.58e-16 72.4
MsG0180005725.01.T01 MTR_8g087860 46.667 75 40 0 2 76 11 85 2.59e-16 72.8
MsG0180005725.01.T01 MTR_6g464720 46.377 69 36 1 9 76 2 70 3.01e-16 72.8
MsG0180005725.01.T01 MTR_7g075870 36.364 110 68 1 10 119 3 110 3.27e-16 72.0
MsG0180005725.01.T01 MTR_2g009890 45.588 68 37 0 9 76 2 69 1.27e-15 71.2
MsG0180005725.01.T01 MTR_5g021270 47.143 70 35 1 9 76 2 71 2.16e-15 70.1
MsG0180005725.01.T01 MTR_5g021270 47.143 70 35 1 9 76 2 71 2.18e-15 70.1
MsG0180005725.01.T01 MTR_6g015975 46.377 69 36 1 9 76 2 70 2.34e-15 70.1
MsG0180005725.01.T01 MTR_0003s0590 33.562 146 66 3 9 123 2 147 2.87e-15 70.1
MsG0180005725.01.T01 MTR_3g102570 39.423 104 60 3 9 111 2 103 2.93e-15 70.9
MsG0180005725.01.T01 MTR_7g016600 46.377 69 36 1 9 76 2 70 3.53e-15 69.7
MsG0180005725.01.T01 MTR_5g031000 45.588 68 37 0 9 76 2 69 5.56e-15 68.9
MsG0180005725.01.T01 MTR_7g075870 36.036 111 68 2 10 119 3 111 5.57e-15 68.6
MsG0180005725.01.T01 MTR_5g031000 45.588 68 37 0 9 76 2 69 5.68e-15 68.9
MsG0180005725.01.T01 MTR_5g046790 36.170 94 48 3 9 90 2 95 6.38e-15 68.6
MsG0180005725.01.T01 MTR_8g066260 43.478 69 38 1 9 76 2 70 6.93e-15 68.9
MsG0180005725.01.T01 MTR_5g032150 44.118 68 38 0 9 76 2 69 8.78e-15 68.6
MsG0180005725.01.T01 MTR_7g016630 40.580 69 40 1 9 76 2 70 1.05e-14 68.6
MsG0180005725.01.T01 MTR_5g032520 44.118 68 38 0 9 76 2 69 1.07e-14 68.2
MsG0180005725.01.T01 MTR_2g461710 51.786 56 27 0 9 64 2 57 1.22e-14 63.9
MsG0180005725.01.T01 MTR_1g038300 45.714 70 36 1 9 76 2 71 2.40e-14 67.4
MsG0180005725.01.T01 MTR_3g088615 41.429 70 39 1 9 76 2 71 2.63e-14 66.2
MsG0180005725.01.T01 MTR_4g084740 43.421 76 41 2 9 83 2 76 2.63e-14 68.2
MsG0180005725.01.T01 MTR_5g046870 44.928 69 37 1 9 76 2 70 2.78e-14 64.7
MsG0180005725.01.T01 MTR_1g029670 43.939 66 36 1 9 74 2 66 4.62e-14 65.5
MsG0180005725.01.T01 MTR_5g066960 45.614 57 31 0 9 65 2 58 9.32e-14 62.0
MsG0180005725.01.T01 MTR_3g113030 42.857 70 38 1 9 76 2 71 1.76e-13 65.1
MsG0180005725.01.T01 MTR_3g084980 51.786 56 27 0 9 64 2 57 1.98e-13 65.1
MsG0180005725.01.T01 MTR_8g097090 50.000 56 28 0 9 64 2 57 3.24e-13 64.3
MsG0180005725.01.T01 MTR_7g075850 42.857 70 38 1 9 76 2 71 3.45e-13 64.3
MsG0180005725.01.T01 MTR_8g022970 41.333 75 44 0 8 82 17 91 3.83e-13 63.2
MsG0180005725.01.T01 MTR_4g109810 48.214 56 29 0 9 64 2 57 4.68e-13 63.9
MsG0180005725.01.T01 MTR_4g093030 39.189 74 45 0 9 82 2 75 7.23e-12 59.3
MsG0180005725.01.T01 MTR_4g051538 40.741 81 48 0 1 81 1 81 1.03e-11 60.1
MsG0180005725.01.T01 MTR_3g437790 46.296 54 28 1 26 78 30 83 3.32e-11 58.2
MsG0180005725.01.T01 MTR_4g036050 37.143 70 43 1 9 77 2 71 4.93e-11 57.4
MsG0180005725.01.T01 MTR_4g036050 37.143 70 43 1 9 77 2 71 5.02e-11 57.8
MsG0180005725.01.T01 MTR_4g036050 37.143 70 43 1 9 77 2 71 5.16e-11 57.8
MsG0180005725.01.T01 MTR_4g036050 37.143 70 43 1 9 77 2 71 5.29e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005725.01.T01 AT5G60440 63.281 128 45 1 5 130 3 130 2.47e-52 167
MsG0180005725.01.T01 AT4G36590 52.419 124 52 2 5 123 3 124 1.05e-36 125
MsG0180005725.01.T01 AT1G01530 56.604 106 44 1 4 109 2 105 3.55e-36 124
MsG0180005725.01.T01 AT2G24840 50.000 128 56 3 6 130 60 182 2.09e-35 123
MsG0180005725.01.T01 AT1G65360 48.246 114 57 1 5 118 3 114 1.37e-33 117
MsG0180005725.01.T01 AT2G34440 43.363 113 63 1 9 121 2 113 8.57e-28 100
MsG0180005725.01.T01 AT3G66656 42.017 119 65 1 9 123 2 120 1.09e-25 95.9
MsG0180005725.01.T01 AT1G72350 53.425 73 32 1 9 81 43 113 3.27e-22 87.8
MsG0180005725.01.T01 AT3G04100 33.913 115 73 1 2 113 7 121 9.28e-21 83.6
MsG0180005725.01.T01 AT4G22950 47.368 76 40 0 10 85 3 78 2.41e-19 79.3
MsG0180005725.01.T01 AT2G45660 41.748 103 53 3 10 106 3 104 6.73e-19 77.8
MsG0180005725.01.T01 AT4G22950 49.296 71 36 0 10 80 3 73 1.83e-18 78.2
MsG0180005725.01.T01 AT4G22950 49.296 71 36 0 10 80 3 73 1.83e-18 78.2
MsG0180005725.01.T01 AT2G45660 50.000 68 34 0 10 77 3 70 2.07e-18 77.8
MsG0180005725.01.T01 AT2G45650 50.000 68 34 0 9 76 2 69 3.04e-18 78.2
MsG0180005725.01.T01 AT4G09960 48.529 68 35 0 9 76 2 69 5.43e-18 76.6
MsG0180005725.01.T01 AT4G09960 48.529 68 35 0 9 76 2 69 5.80e-18 77.0
MsG0180005725.01.T01 AT4G09960 48.529 68 35 0 9 76 3 70 5.96e-18 77.0
MsG0180005725.01.T01 AT4G09960 48.529 68 35 0 9 76 12 79 7.23e-18 76.6
MsG0180005725.01.T01 AT4G09960 48.529 68 35 0 9 76 28 95 9.70e-18 76.6
MsG0180005725.01.T01 AT4G09960 48.529 68 35 0 9 76 97 164 1.80e-17 77.0
MsG0180005725.01.T01 AT5G51870 50.746 67 33 0 10 76 3 69 2.70e-17 74.7
MsG0180005725.01.T01 AT5G51870 50.746 67 33 0 10 76 3 69 2.84e-17 73.9
MsG0180005725.01.T01 AT5G51870 50.746 67 33 0 10 76 3 69 4.74e-17 74.3
MsG0180005725.01.T01 AT5G51870 50.746 67 33 0 10 76 13 79 5.86e-17 74.3
MsG0180005725.01.T01 AT5G51870 47.222 72 38 0 5 76 21 92 6.06e-17 73.6
MsG0180005725.01.T01 AT4G18960 38.318 107 56 1 2 108 11 107 6.55e-17 74.3
MsG0180005725.01.T01 AT5G23260 45.745 94 43 3 5 90 12 105 9.19e-17 74.3
MsG0180005725.01.T01 AT5G23260 43.478 92 46 2 5 90 14 105 9.36e-17 74.3
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 9.95e-17 70.9
MsG0180005725.01.T01 AT1G28460 34.694 98 64 0 5 102 4 101 1.05e-16 72.8
MsG0180005725.01.T01 AT3G57230 44.118 68 38 0 9 76 2 69 1.19e-16 71.6
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 1.34e-16 71.6
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 1.34e-16 71.6
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 1.34e-16 71.6
MsG0180005725.01.T01 AT4G24540 37.069 116 68 2 9 124 2 112 1.51e-16 72.8
MsG0180005725.01.T01 AT5G23260 45.455 88 42 2 9 90 2 89 1.57e-16 73.6
MsG0180005725.01.T01 AT5G23260 45.455 88 42 2 9 90 2 89 1.66e-16 73.2
MsG0180005725.01.T01 AT3G61120 48.529 68 35 0 9 76 2 69 1.68e-16 73.2
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 1.94e-16 71.2
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 1.94e-16 71.2
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 1.94e-16 71.2
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 1.94e-16 71.2
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 1.94e-16 71.2
MsG0180005725.01.T01 AT4G37940 45.588 68 37 0 9 76 2 69 2.25e-16 72.4
MsG0180005725.01.T01 AT4G37940 45.588 68 37 0 9 76 2 69 2.27e-16 72.8
MsG0180005725.01.T01 AT2G42830 48.529 68 35 0 9 76 17 84 2.73e-16 72.8
MsG0180005725.01.T01 AT2G42830 48.529 68 35 0 9 76 17 84 3.01e-16 72.8
MsG0180005725.01.T01 AT4G37940 45.588 68 37 0 9 76 2 69 3.42e-16 71.2
MsG0180005725.01.T01 AT5G10140 47.826 69 35 1 9 76 2 70 3.45e-16 70.9
MsG0180005725.01.T01 AT3G58780 47.887 71 37 0 6 76 14 84 3.82e-16 72.4
MsG0180005725.01.T01 AT5G51860 49.254 67 34 0 10 76 3 69 3.89e-16 71.6
MsG0180005725.01.T01 AT3G57390 47.059 68 36 0 9 76 2 69 4.15e-16 72.0
MsG0180005725.01.T01 AT2G22540 47.059 68 36 0 9 76 2 69 4.50e-16 72.0
MsG0180005725.01.T01 AT2G22540 47.059 68 36 0 9 76 2 69 4.50e-16 72.0
MsG0180005725.01.T01 AT4G11880 45.833 72 38 1 10 80 3 74 4.52e-16 70.9
MsG0180005725.01.T01 AT4G11880 45.833 72 38 1 10 80 3 74 4.52e-16 70.9
MsG0180005725.01.T01 AT3G58780 47.887 71 37 0 6 76 20 90 4.72e-16 72.4
MsG0180005725.01.T01 AT5G51860 49.254 67 34 0 10 76 3 69 5.02e-16 71.2
MsG0180005725.01.T01 AT5G10140 47.826 69 35 1 9 76 2 70 5.05e-16 70.9
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 5.17e-16 71.2
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 5.17e-16 71.2
MsG0180005725.01.T01 AT5G10140 47.826 69 35 1 9 76 2 70 5.32e-16 70.9
MsG0180005725.01.T01 AT3G57230 44.118 68 38 0 9 76 2 69 5.48e-16 72.0
MsG0180005725.01.T01 AT3G57230 44.118 68 38 0 9 76 2 69 5.48e-16 72.0
MsG0180005725.01.T01 AT5G13790 48.529 68 35 0 9 76 2 69 5.58e-16 72.4
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 5.66e-16 71.2
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 5.66e-16 71.2
MsG0180005725.01.T01 AT5G62165 46.269 67 36 0 10 76 3 69 5.66e-16 71.2
MsG0180005725.01.T01 AT5G13790 48.529 68 35 0 9 76 2 69 5.68e-16 72.0
MsG0180005725.01.T01 AT5G10140 47.826 69 35 1 9 76 2 70 6.59e-16 70.9
MsG0180005725.01.T01 AT3G58780 47.887 71 37 0 6 76 14 84 7.07e-16 72.0
MsG0180005725.01.T01 AT3G30260 34.167 120 70 3 9 127 2 113 7.83e-16 71.6
MsG0180005725.01.T01 AT3G57390 47.059 68 36 0 9 76 2 69 8.19e-16 71.6
MsG0180005725.01.T01 AT4G11880 45.833 72 38 1 10 80 3 74 9.22e-16 70.9
MsG0180005725.01.T01 AT4G11880 45.833 72 38 1 10 80 3 74 9.22e-16 70.9
MsG0180005725.01.T01 AT3G54340 44.286 70 37 1 9 76 2 71 9.66e-16 70.9
MsG0180005725.01.T01 AT1G77950 43.421 76 41 2 9 83 2 76 1.22e-15 71.2
MsG0180005725.01.T01 AT1G77950 43.421 76 41 2 9 83 2 76 1.22e-15 71.2
MsG0180005725.01.T01 AT1G77950 43.421 76 41 2 9 83 2 76 1.22e-15 71.2
MsG0180005725.01.T01 AT1G77950 43.421 76 41 2 9 83 2 76 1.22e-15 71.2
MsG0180005725.01.T01 AT2G22630 44.118 68 38 0 9 76 2 69 1.45e-15 70.5
MsG0180005725.01.T01 AT2G22630 44.118 68 38 0 9 76 2 69 1.45e-15 70.5
MsG0180005725.01.T01 AT1G22130 34.286 105 68 1 9 112 2 106 1.86e-15 71.2
MsG0180005725.01.T01 AT5G60910 46.479 71 35 1 9 79 2 69 2.08e-15 70.5
MsG0180005725.01.T01 AT1G69120 38.889 90 52 1 9 98 2 88 2.23e-15 70.1
MsG0180005725.01.T01 AT1G17310 52.703 74 33 1 8 81 47 118 2.44e-15 69.7
MsG0180005725.01.T01 AT1G29962 40.541 74 44 0 5 78 4 77 2.50e-15 68.9
MsG0180005725.01.T01 AT1G77980 35.238 105 67 1 9 112 2 106 2.54e-15 70.9
MsG0180005725.01.T01 AT1G17310 50.633 79 37 1 8 86 58 134 3.02e-15 69.7
MsG0180005725.01.T01 AT1G26310 37.500 96 46 2 9 90 2 97 3.43e-15 70.1
MsG0180005725.01.T01 AT1G69120 38.889 90 52 1 9 98 2 88 4.01e-15 69.7
MsG0180005725.01.T01 AT5G20240 44.286 70 37 1 9 76 2 71 4.59e-15 67.8
MsG0180005725.01.T01 AT5G20240 44.286 70 37 1 9 76 2 71 7.39e-15 68.2
MsG0180005725.01.T01 AT5G15800 46.377 69 36 1 9 76 2 70 9.86e-15 68.6
MsG0180005725.01.T01 AT5G15800 46.377 69 36 1 9 76 2 70 1.82e-14 68.2
MsG0180005725.01.T01 AT2G14210 43.478 69 38 1 9 76 2 70 2.58e-14 67.4
MsG0180005725.01.T01 AT2G14210 43.478 69 38 1 9 76 2 70 3.21e-14 67.0
MsG0180005725.01.T01 AT5G65050 43.478 69 38 1 9 76 2 70 3.78e-14 65.9
MsG0180005725.01.T01 AT2G03710 44.286 70 37 2 9 76 2 71 4.11e-14 65.9
MsG0180005725.01.T01 AT3G02310 44.928 69 37 1 9 76 2 70 4.92e-14 65.9
MsG0180005725.01.T01 AT1G47760 31.405 121 67 3 9 129 2 106 9.06e-14 65.1
MsG0180005725.01.T01 AT3G58780 50.000 60 30 0 6 65 14 73 9.48e-14 65.9
MsG0180005725.01.T01 AT2G22540 51.786 56 27 0 9 64 2 57 1.02e-13 65.9
MsG0180005725.01.T01 AT5G65050 43.478 69 38 1 9 76 2 70 1.06e-13 64.7
MsG0180005725.01.T01 AT5G65050 43.478 69 38 1 9 76 2 70 1.06e-13 65.1
MsG0180005725.01.T01 AT3G58780 50.000 60 30 0 6 65 14 73 1.17e-13 65.9
MsG0180005725.01.T01 AT5G65050 43.478 69 38 1 9 76 2 70 1.21e-13 64.7
MsG0180005725.01.T01 AT2G03710 44.286 70 37 2 9 76 2 71 1.57e-13 65.5
MsG0180005725.01.T01 AT2G03710 44.286 70 37 2 9 76 2 71 1.64e-13 65.5
MsG0180005725.01.T01 AT5G65060 43.478 69 38 1 9 76 2 70 1.83e-13 64.3
MsG0180005725.01.T01 AT1G24260 39.175 97 56 1 9 105 2 95 1.97e-13 65.1
MsG0180005725.01.T01 AT1G24260 50.000 56 28 0 9 64 2 57 2.10e-13 65.1
MsG0180005725.01.T01 AT1G24260 39.175 97 56 1 9 105 2 95 2.24e-13 64.7
MsG0180005725.01.T01 AT5G65060 43.478 69 38 1 9 76 2 70 2.72e-13 63.5
MsG0180005725.01.T01 AT1G71692 41.429 70 40 1 9 77 2 71 3.04e-13 63.9
MsG0180005725.01.T01 AT5G65060 43.478 69 38 1 9 76 2 70 3.14e-13 63.9
MsG0180005725.01.T01 AT3G02310 44.928 69 37 1 9 76 2 70 3.72e-13 64.3
MsG0180005725.01.T01 AT5G65070 39.130 69 41 1 9 76 2 70 6.51e-13 62.0
MsG0180005725.01.T01 AT5G65070 39.130 69 41 1 9 76 2 70 1.29e-12 62.4
MsG0180005725.01.T01 AT1G28450 35.135 74 48 0 5 78 4 77 1.85e-12 61.6
MsG0180005725.01.T01 AT5G65070 39.130 69 41 1 9 76 2 70 2.68e-12 61.6
MsG0180005725.01.T01 AT5G65070 39.130 69 41 1 9 76 2 70 3.64e-12 61.2
MsG0180005725.01.T01 AT4G37435 37.500 72 44 1 9 79 2 73 6.18e-12 60.1
MsG0180005725.01.T01 AT5G65070 43.860 57 32 0 9 65 2 58 1.45e-11 59.7

Find 23 sgRNAs with CRISPR-Local

Find 30 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCATGGTACCATTGTTT+TGG 0.337688 1:+95352932 None:intergenic
TCTTCTCGTTGTCCAGTAGC+TGG 0.424175 1:+95352848 None:intergenic
CGTAGTGGGCTCTTCAAGAA+AGG 0.499918 1:-95353084 MsG0180005725.01.T01:CDS
GACTCAGATCAACCAGCTAC+TGG 0.507836 1:-95352860 MsG0180005725.01.T01:CDS
TGGCCAACCCAATGTGGATA+CGG 0.509185 1:-95352986 MsG0180005725.01.T01:CDS
TCTATGACCGTATCCACATT+GGG 0.514276 1:+95352979 None:intergenic
GCTCGCGCACGTTGGCGCTA+CGG 0.534754 1:+95352896 None:intergenic
ATCTATGACCGTATCCACAT+TGG 0.545676 1:+95352978 None:intergenic
CTTTCTCGAAGCGCCGTAGT+GGG 0.553366 1:-95353098 MsG0180005725.01.T01:CDS
AGCGACATGTGCACCACAGA+TGG 0.558797 1:+95353047 None:intergenic
CTTCAACCATGTCGAGTGGA+AGG 0.562158 1:-95353185 None:intergenic
AATGAAAATACCTTCTCTCC+AGG 0.563686 1:+95353009 None:intergenic
ACTTTCTCGAAGCGCCGTAG+TGG 0.571963 1:-95353099 MsG0180005725.01.T01:CDS
AGTATTGAGCTCGCGCACGT+TGG 0.584782 1:+95352888 None:intergenic
TGACCGTATCCACATTGGGT+TGG 0.608969 1:+95352983 None:intergenic
CTTTCTTGAAGAGCCCACTA+CGG 0.610979 1:+95353085 None:intergenic
TTCATTTGGCCAACCCAATG+TGG 0.622502 1:-95352992 MsG0180005725.01.T01:CDS
TGTGCTTCAACCATGTCGAG+TGG 0.638522 1:-95353189 None:intergenic
CGAGTCCCACCCCAAAACAA+TGG 0.639467 1:-95352943 MsG0180005725.01.T01:CDS
GTGAGTCTCAATGAATTGCA+TGG 0.640763 1:+95352918 None:intergenic
AGTGAGCTTTGTACCATCTG+TGG 0.652271 1:-95353060 MsG0180005725.01.T01:CDS
TCGAGTGGAAGGAAAAGCCG+AGG 0.691796 1:-95353174 MsG0180005725.01.T01:CDS
GGACAACGAGAAGAAACGTG+CGG 0.746947 1:-95352839 MsG0180005725.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCATCTCAATCTTT+TGG + Chr1:95352839-95352858 None:intergenic 20.0%
AATGAAAATACCTTCTCTCC+AGG + Chr1:95352978-95352997 None:intergenic 35.0%
! ATTGCATGGTACCATTGTTT+TGG + Chr1:95353055-95353074 None:intergenic 35.0%
! TTGCATGGTACCATTGTTTT+GGG + Chr1:95353054-95353073 None:intergenic 35.0%
!!! GGAGAGAAGGTATTTTCATT+TGG - Chr1:95352978-95352997 MsG0180005725.01.T01:CDS 35.0%
ATCTATGACCGTATCCACAT+TGG + Chr1:95353009-95353028 None:intergenic 40.0%
GTGAGTCTCAATGAATTGCA+TGG + Chr1:95353069-95353088 None:intergenic 40.0%
TCTATGACCGTATCCACATT+GGG + Chr1:95353008-95353027 None:intergenic 40.0%
!! TGCATGGTACCATTGTTTTG+GGG + Chr1:95353053-95353072 None:intergenic 40.0%
CTTTCTTGAAGAGCCCACTA+CGG + Chr1:95352902-95352921 None:intergenic 45.0%
TTCATTTGGCCAACCCAATG+TGG - Chr1:95352992-95353011 MsG0180005725.01.T01:CDS 45.0%
! AGTGAGCTTTGTACCATCTG+TGG - Chr1:95352924-95352943 MsG0180005725.01.T01:CDS 45.0%
! TCTCAATCTTTTGGCGACCT+CGG + Chr1:95352830-95352849 None:intergenic 45.0%
! TGTTTTCTCACCTGGAGAGA+AGG - Chr1:95352965-95352984 MsG0180005725.01.T01:CDS 45.0%
!!! ATGGTACCATTGTTTTGGGG+TGG + Chr1:95353050-95353069 None:intergenic 45.0%
!!! TGGTACCATTGTTTTGGGGT+GGG + Chr1:95353049-95353068 None:intergenic 45.0%
GACTCAGATCAACCAGCTAC+TGG - Chr1:95353124-95353143 MsG0180005725.01.T01:CDS 50.0%
GGACAACGAGAAGAAACGTG+CGG - Chr1:95353145-95353164 MsG0180005725.01.T01:CDS 50.0%
TCTTCTCGTTGTCCAGTAGC+TGG + Chr1:95353139-95353158 None:intergenic 50.0%
TGACCGTATCCACATTGGGT+TGG + Chr1:95353004-95353023 None:intergenic 50.0%
TGGCCAACCCAATGTGGATA+CGG - Chr1:95352998-95353017 MsG0180005725.01.T01:CDS 50.0%
!! CGTAGTGGGCTCTTCAAGAA+AGG - Chr1:95352900-95352919 MsG0180005725.01.T01:CDS 50.0%
!! GCTCTCGTTGTTTTCTCACC+TGG - Chr1:95352957-95352976 MsG0180005725.01.T01:CDS 50.0%
AGCGACATGTGCACCACAGA+TGG + Chr1:95352940-95352959 None:intergenic 55.0%
CGAGTCCCACCCCAAAACAA+TGG - Chr1:95353041-95353060 MsG0180005725.01.T01:CDS 55.0%
TCGAGTGGAAGGAAAAGCCG+AGG - Chr1:95352810-95352829 MsG0180005725.01.T01:CDS 55.0%
! AGTATTGAGCTCGCGCACGT+TGG + Chr1:95353099-95353118 None:intergenic 55.0%
!! ACTTTCTCGAAGCGCCGTAG+TGG - Chr1:95352885-95352904 MsG0180005725.01.T01:CDS 55.0%
!! CTTTCTCGAAGCGCCGTAGT+GGG - Chr1:95352886-95352905 MsG0180005725.01.T01:CDS 55.0%
GCTCGCGCACGTTGGCGCTA+CGG + Chr1:95353091-95353110 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 95352807 95353199 95352807 ID=MsG0180005725.01;Name=MsG0180005725.01
Chr1 mRNA 95352807 95353199 95352807 ID=MsG0180005725.01.T01;Parent=MsG0180005725.01;Name=MsG0180005725.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|130
Chr1 exon 95352807 95353199 95352807 ID=MsG0180005725.01.T01:exon:19359;Parent=MsG0180005725.01.T01
Chr1 CDS 95352807 95353199 95352807 ID=MsG0180005725.01.T01:cds;Parent=MsG0180005725.01.T01
Gene Sequence

>MsG0180005725.01.T01

ATGTCGAGTGGAAGGAAAAGCCGAGGTCGCCAAAAGATTGAGATGAAAAAAATGAGCAATGAGAGCAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGGCAGTGAGCTTTGTACCATCTGTGGTGCACATGTCGCTCTCGTTGTTTTCTCACCTGGAGAGAAGGTATTTTCATTTGGCCAACCCAATGTGGATACGGTCATAGATCGTTATCTCTCTCGAGTCCCACCCCAAAACAATGGTACCATGCAATTCATTGAGACTCACCGTAGCGCCAACGTGCGCGAGCTCAATACTCAGTTGACTCAGATCAACCAGCTACTGGACAACGAGAAGAAACGTGCGGAAGAGCTGAGACACTTGCGCAAAGCTACATAG
Protein sequence

>MsG0180005725.01.T01

MSSGRKSRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKGSELCTICGAHVALVVFSPGEKVFSFGQPNVDTVIDRYLSRVPPQNNGTMQFIETHRSANVRELNTQLTQINQLLDNEKKRAEELRHLRKAT*