AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005726.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005726.01.T01 MTR_8g043650 91.983 237 19 0 1 237 1 237 3.23e-162 448
MsG0180005726.01.T01 MTR_1g105910 95.536 224 10 0 1 224 1 224 2.66e-160 443
MsG0180005726.01.T01 MTR_1g105920 89.954 219 22 0 1 219 1 219 7.17e-148 412
MsG0180005726.01.T01 MTR_2g030740 87.764 237 29 0 1 237 1 237 6.08e-147 409
MsG0180005726.01.T01 MTR_1g012570 89.030 237 26 0 1 237 1 237 8.64e-145 404
MsG0180005726.01.T01 MTR_3g052920 84.932 219 33 0 1 219 1 219 2.77e-141 395
MsG0180005726.01.T01 MTR_1g105905 85.000 220 33 0 18 237 1 220 7.45e-139 388
MsG0180005726.01.T01 MTR_3g052870 79.452 219 26 1 1 219 1 200 3.78e-122 346
MsG0180005726.01.T01 MTR_0121s0080 70.886 237 68 1 1 237 1 236 8.88e-119 338
MsG0180005726.01.T01 MTR_1g106070 86.813 182 24 0 1 182 1 182 2.26e-116 330
MsG0180005726.01.T01 MTR_3g030770 72.222 234 47 3 1 224 1 226 3.19e-115 329
MsG0180005726.01.T01 MTR_5g055100 65.401 237 82 0 1 237 1 237 2.43e-114 327
MsG0180005726.01.T01 MTR_1g108510 72.222 234 47 3 1 224 1 226 2.67e-114 327
MsG0180005726.01.T01 MTR_1g077360 68.444 225 71 0 1 225 1 225 2.45e-113 324
MsG0180005726.01.T01 MTR_2g093190 71.795 234 48 3 1 224 1 226 9.28e-113 323
MsG0180005726.01.T01 MTR_2g085280 65.254 236 82 0 1 236 1 236 1.72e-112 322
MsG0180005726.01.T01 MTR_2g085250 65.254 236 82 0 1 236 1 236 6.33e-112 321
MsG0180005726.01.T01 MTR_1g075600 68.304 224 71 0 1 224 1 224 2.43e-110 317
MsG0180005726.01.T01 MTR_5g045560 67.932 237 76 0 1 237 1 237 1.96e-109 315
MsG0180005726.01.T01 MTR_1g108580 73.611 216 49 1 1 216 1 208 3.53e-109 313
MsG0180005726.01.T01 MTR_5g053390 67.411 224 73 0 1 224 1 224 1.68e-108 312
MsG0180005726.01.T01 MTR_7g062350 65.022 223 76 2 16 237 27 248 2.46e-98 287
MsG0180005726.01.T01 MTR_1g075570 63.483 178 51 1 18 195 1 164 1.65e-70 213
MsG0180005726.01.T01 MTR_0121s0100 79.688 128 26 0 1 128 1 128 4.44e-69 208
MsG0180005726.01.T01 MTR_3g080940 52.778 180 84 1 7 186 7 185 8.92e-65 200
MsG0180005726.01.T01 MTR_3g030780 75.194 129 32 0 1 129 1 129 1.60e-64 197
MsG0180005726.01.T01 MTR_3g067910 67.647 102 33 0 21 122 2 103 1.69e-45 147
MsG0180005726.01.T01 MTR_2g105290 40.936 171 91 2 5 172 8 171 3.27e-41 139
MsG0180005726.01.T01 MTR_8g086290 42.169 166 86 2 5 167 8 166 7.81e-41 138
MsG0180005726.01.T01 MTR_7g028448 45.161 155 73 3 5 159 8 150 2.88e-35 124
MsG0180005726.01.T01 MTR_4g036915 45.161 155 73 3 5 159 8 150 2.88e-35 124
MsG0180005726.01.T01 MTR_4g127140 39.227 181 90 4 5 172 8 181 6.31e-32 115
MsG0180005726.01.T01 MTR_1g108500 58.407 113 24 2 8 118 94 185 5.15e-31 117
MsG0180005726.01.T01 MTR_3g067875 85.714 56 8 0 18 73 1 56 2.01e-28 102
MsG0180005726.01.T01 MTR_3g067870 71.429 63 18 0 16 78 83 145 2.66e-24 95.1
MsG0180005726.01.T01 MTR_3g067915 64.179 67 24 0 60 126 30 96 8.71e-24 92.0
MsG0180005726.01.T01 MTR_1g047550 60.870 69 27 0 9 77 2 70 1.36e-23 94.0
MsG0180005726.01.T01 MTR_8g079502 60.870 69 27 0 9 77 2 70 3.58e-23 92.8
MsG0180005726.01.T01 MTR_4g131030 40.517 116 54 3 9 109 2 117 1.33e-22 92.0
MsG0180005726.01.T01 MTR_1g063160 45.536 112 56 3 9 118 2 110 1.99e-22 90.9
MsG0180005726.01.T01 MTR_8g051580 42.063 126 68 2 9 131 2 125 2.13e-22 90.9
MsG0180005726.01.T01 MTR_1g054265 45.545 101 53 1 9 109 2 100 2.36e-22 90.5
MsG0180005726.01.T01 MTR_8g046350 38.462 130 72 2 9 135 2 126 2.64e-21 87.4
MsG0180005726.01.T01 MTR_4g094632 41.509 106 60 1 9 114 2 105 3.21e-20 84.3
MsG0180005726.01.T01 MTR_4g093970 33.526 173 88 4 10 161 29 195 2.98e-19 84.0
MsG0180005726.01.T01 MTR_1g053070 36.667 150 80 3 9 157 2 137 4.90e-19 83.6
MsG0180005726.01.T01 MTR_3g005530 52.941 68 32 0 9 76 2 69 7.85e-19 82.4
MsG0180005726.01.T01 MTR_3g452380 42.453 106 51 1 3 108 11 106 1.51e-18 82.0
MsG0180005726.01.T01 MTR_4g094638 41.509 106 61 1 9 113 2 107 2.47e-18 80.1
MsG0180005726.01.T01 MTR_4g102530 50.685 73 36 0 10 82 3 75 6.00e-18 79.7
MsG0180005726.01.T01 MTR_8g033270 33.533 167 97 4 9 167 2 162 1.30e-17 79.7
MsG0180005726.01.T01 MTR_5g066180 51.471 68 33 0 9 76 2 69 1.97e-17 78.6
MsG0180005726.01.T01 MTR_3g102570 33.333 171 90 6 9 162 2 165 4.16e-17 79.3
MsG0180005726.01.T01 MTR_2g017865 30.270 185 100 4 9 167 17 198 4.32e-17 78.2
MsG0180005726.01.T01 MTR_8g087860 51.471 68 33 0 9 76 18 85 6.60e-17 77.4
MsG0180005726.01.T01 MTR_1g101970 50.000 68 34 0 9 76 2 69 8.30e-17 76.3
MsG0180005726.01.T01 MTR_6g464720 49.275 69 34 1 9 76 2 70 1.01e-16 77.0
MsG0180005726.01.T01 MTR_4g109830 47.826 69 35 1 9 76 2 70 1.66e-16 76.3
MsG0180005726.01.T01 MTR_8g022970 32.911 158 93 3 8 159 17 167 1.73e-16 75.1
MsG0180005726.01.T01 MTR_5g032520 48.529 68 35 0 9 76 2 69 2.10e-16 75.9
MsG0180005726.01.T01 MTR_5g032150 29.384 211 130 6 9 201 2 211 2.11e-16 75.9
MsG0180005726.01.T01 MTR_8g033220 47.436 78 41 0 10 87 3 80 2.40e-16 75.5
MsG0180005726.01.T01 MTR_7g075870 38.182 110 66 1 10 119 3 110 2.52e-16 75.5
MsG0180005726.01.T01 MTR_8g033220 47.436 78 41 0 10 87 3 80 2.70e-16 75.5
MsG0180005726.01.T01 MTR_2g009890 48.529 68 35 0 9 76 2 69 4.34e-16 75.9
MsG0180005726.01.T01 MTR_4g084740 47.368 76 38 2 9 83 2 76 6.57e-16 75.9
MsG0180005726.01.T01 MTR_0003s0590 51.471 68 33 0 9 76 2 69 9.53e-16 74.7
MsG0180005726.01.T01 MTR_6g015975 49.275 69 34 1 9 76 2 70 1.41e-15 73.9
MsG0180005726.01.T01 MTR_8g066260 40.964 83 46 1 9 91 2 81 1.76e-15 73.6
MsG0180005726.01.T01 MTR_7g016600 49.275 69 34 1 9 76 2 70 1.83e-15 73.6
MsG0180005726.01.T01 MTR_5g021270 50.000 70 33 1 9 76 2 71 2.07e-15 73.2
MsG0180005726.01.T01 MTR_5g021270 50.000 70 33 1 9 76 2 71 2.08e-15 73.2
MsG0180005726.01.T01 MTR_5g046790 45.070 71 36 1 9 79 2 69 2.84e-15 72.4
MsG0180005726.01.T01 MTR_5g031000 48.529 68 35 0 9 76 2 69 3.03e-15 72.8
MsG0180005726.01.T01 MTR_5g031000 48.529 68 35 0 9 76 2 69 3.12e-15 72.8
MsG0180005726.01.T01 MTR_2g461710 55.357 56 25 0 9 64 2 57 3.29e-15 68.2
MsG0180005726.01.T01 MTR_3g437790 33.566 143 78 4 26 159 30 164 3.94e-15 71.6
MsG0180005726.01.T01 MTR_7g075870 37.838 111 66 2 10 119 3 111 5.92e-15 71.6
MsG0180005726.01.T01 MTR_5g046870 47.826 69 35 1 9 76 2 70 6.22e-15 69.3
MsG0180005726.01.T01 MTR_3g088615 44.286 70 37 1 9 76 2 71 2.08e-14 69.3
MsG0180005726.01.T01 MTR_7g016630 43.478 69 38 1 9 76 2 70 2.60e-14 70.5
MsG0180005726.01.T01 MTR_1g029670 46.970 66 34 1 9 74 2 66 3.14e-14 68.9
MsG0180005726.01.T01 MTR_1g038300 47.143 70 35 1 9 76 2 71 3.71e-14 69.7
MsG0180005726.01.T01 MTR_7g075850 45.714 70 36 1 9 76 2 71 7.16e-14 69.3
MsG0180005726.01.T01 MTR_3g084980 55.357 56 25 0 9 64 2 57 8.52e-14 68.9
MsG0180005726.01.T01 MTR_8g097090 46.377 69 36 1 9 76 2 70 1.10e-13 68.6
MsG0180005726.01.T01 MTR_3g109930 30.714 140 81 3 27 159 20 150 1.19e-13 67.4
MsG0180005726.01.T01 MTR_4g109810 51.786 56 27 0 9 64 2 57 1.40e-13 68.2
MsG0180005726.01.T01 MTR_5g066960 49.123 57 29 0 9 65 2 58 1.75e-13 63.5
MsG0180005726.01.T01 MTR_3g113030 47.619 63 33 0 9 71 2 64 1.83e-13 67.8
MsG0180005726.01.T01 MTR_4g051538 32.099 162 98 3 1 162 1 150 1.09e-12 65.9
MsG0180005726.01.T01 MTR_4g093030 41.892 74 43 0 9 82 2 75 1.16e-12 64.3
MsG0180005726.01.T01 MTR_4g108720 26.738 187 115 7 9 183 2 178 1.13e-11 63.9
MsG0180005726.01.T01 MTR_4g036050 40.000 70 41 1 9 77 2 71 1.33e-11 61.6
MsG0180005726.01.T01 MTR_4g036050 40.000 70 41 1 9 77 2 71 1.37e-11 62.0
MsG0180005726.01.T01 MTR_4g036050 40.000 70 41 1 9 77 2 71 1.60e-11 61.6
MsG0180005726.01.T01 MTR_2g045020 31.875 160 81 7 7 156 21 162 1.60e-11 61.6
MsG0180005726.01.T01 MTR_4g036050 40.000 70 41 1 9 77 2 71 1.63e-11 62.0
MsG0180005726.01.T01 MTR_1g041615 34.513 113 64 2 20 132 17 119 7.91e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005726.01.T01 AT5G60440 47.541 244 111 5 5 233 3 244 7.69e-62 196
MsG0180005726.01.T01 AT2G24840 49.693 163 71 4 6 162 60 217 5.06e-44 149
MsG0180005726.01.T01 AT1G01530 40.476 210 102 4 4 192 2 209 2.18e-40 139
MsG0180005726.01.T01 AT1G65360 38.222 225 124 6 5 223 3 218 2.52e-39 135
MsG0180005726.01.T01 AT4G36590 45.732 164 79 4 5 160 3 164 1.85e-38 134
MsG0180005726.01.T01 AT2G34440 45.299 117 55 2 9 121 2 113 7.52e-27 102
MsG0180005726.01.T01 AT3G66656 41.985 131 71 2 9 134 2 132 7.35e-26 99.8
MsG0180005726.01.T01 AT3G04100 31.579 152 100 2 2 149 7 158 7.41e-25 97.8
MsG0180005726.01.T01 AT1G72350 35.374 147 62 3 9 155 43 156 8.69e-23 92.8
MsG0180005726.01.T01 AT1G28460 30.636 173 110 3 5 174 4 169 2.60e-20 85.5
MsG0180005726.01.T01 AT4G22950 49.351 77 39 0 10 86 3 79 3.39e-19 82.0
MsG0180005726.01.T01 AT4G09960 46.512 86 45 1 9 93 2 87 4.92e-19 82.8
MsG0180005726.01.T01 AT4G09960 46.512 86 45 1 9 93 3 88 6.04e-19 82.8
MsG0180005726.01.T01 AT4G09960 46.512 86 45 1 9 93 2 87 6.12e-19 82.8
MsG0180005726.01.T01 AT1G29962 29.651 172 114 4 5 169 4 175 6.25e-19 81.6
MsG0180005726.01.T01 AT4G09960 46.512 86 45 1 9 93 12 97 8.17e-19 82.8
MsG0180005726.01.T01 AT4G09960 46.512 86 45 1 9 93 28 113 1.19e-18 82.4
MsG0180005726.01.T01 AT2G45660 52.941 68 32 0 10 77 3 70 1.31e-18 80.1
MsG0180005726.01.T01 AT2G45650 52.941 68 32 0 9 76 2 69 1.53e-18 82.0
MsG0180005726.01.T01 AT4G22950 50.000 76 38 0 10 85 3 78 1.73e-18 81.3
MsG0180005726.01.T01 AT4G22950 50.000 76 38 0 10 85 3 78 1.73e-18 81.3
MsG0180005726.01.T01 AT4G18960 28.279 244 137 8 5 226 15 242 3.16e-18 81.3
MsG0180005726.01.T01 AT2G45660 52.941 68 32 0 10 77 3 70 3.59e-18 80.5
MsG0180005726.01.T01 AT4G09960 46.512 86 45 1 9 93 97 182 3.72e-18 82.4
MsG0180005726.01.T01 AT2G22540 38.406 138 65 5 9 132 2 133 2.19e-17 79.0
MsG0180005726.01.T01 AT2G22540 38.406 138 65 5 9 132 2 133 2.19e-17 79.0
MsG0180005726.01.T01 AT4G24540 36.486 148 77 5 9 156 2 132 2.91e-17 78.2
MsG0180005726.01.T01 AT5G51870 53.731 67 31 0 10 76 3 69 3.02e-17 77.0
MsG0180005726.01.T01 AT5G51870 53.731 67 31 0 10 76 3 69 3.33e-17 77.8
MsG0180005726.01.T01 AT3G57230 47.059 68 36 0 9 76 2 69 5.14e-17 75.5
MsG0180005726.01.T01 AT2G42830 47.368 76 40 0 1 76 9 84 6.51e-17 77.8
MsG0180005726.01.T01 AT5G51870 50.000 72 36 0 5 76 21 92 6.55e-17 76.6
MsG0180005726.01.T01 AT1G22130 36.441 118 73 2 9 125 2 118 6.61e-17 79.0
MsG0180005726.01.T01 AT2G42830 47.368 76 40 0 1 76 9 84 7.35e-17 77.4
MsG0180005726.01.T01 AT5G51870 53.731 67 31 0 10 76 3 69 8.39e-17 76.6
MsG0180005726.01.T01 AT3G58780 50.704 71 35 0 6 76 14 84 8.47e-17 77.4
MsG0180005726.01.T01 AT3G61120 51.471 68 33 0 9 76 2 69 9.19e-17 77.0
MsG0180005726.01.T01 AT3G58780 50.704 71 35 0 6 76 20 90 9.34e-17 77.4
MsG0180005726.01.T01 AT5G51870 53.731 67 31 0 10 76 13 79 9.74e-17 77.0
MsG0180005726.01.T01 AT4G37940 48.529 68 35 0 9 76 2 69 1.15e-16 76.3
MsG0180005726.01.T01 AT3G57390 50.000 68 34 0 9 76 2 69 1.16e-16 76.6
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 1.18e-16 73.6
MsG0180005726.01.T01 AT5G10140 50.725 69 33 1 9 76 2 70 1.19e-16 75.1
MsG0180005726.01.T01 AT4G37940 48.529 68 35 0 9 76 2 69 1.27e-16 76.6
MsG0180005726.01.T01 AT1G77980 38.095 105 64 1 9 112 2 106 1.32e-16 77.8
MsG0180005726.01.T01 AT1G77950 47.368 76 38 2 9 83 2 76 1.49e-16 76.6
MsG0180005726.01.T01 AT1G77950 47.368 76 38 2 9 83 2 76 1.49e-16 76.6
MsG0180005726.01.T01 AT1G77950 47.368 76 38 2 9 83 2 76 1.49e-16 76.6
MsG0180005726.01.T01 AT1G77950 47.368 76 38 2 9 83 2 76 1.49e-16 76.6
MsG0180005726.01.T01 AT4G37940 48.529 68 35 0 9 76 2 69 1.55e-16 75.1
MsG0180005726.01.T01 AT3G58780 50.704 71 35 0 6 76 14 84 1.71e-16 77.0
MsG0180005726.01.T01 AT5G10140 50.725 69 33 1 9 76 2 70 1.78e-16 75.1
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 1.85e-16 74.3
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 1.85e-16 74.3
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 1.85e-16 74.3
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 1.85e-16 74.3
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 1.85e-16 74.3
MsG0180005726.01.T01 AT3G57230 47.059 68 36 0 9 76 2 69 1.97e-16 76.3
MsG0180005726.01.T01 AT3G57230 47.059 68 36 0 9 76 2 69 1.97e-16 76.3
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 2.06e-16 74.3
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 2.06e-16 74.3
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 2.06e-16 74.3
MsG0180005726.01.T01 AT3G54340 30.128 156 85 3 9 162 2 135 2.13e-16 75.9
MsG0180005726.01.T01 AT5G10140 50.725 69 33 1 9 76 2 70 2.14e-16 75.1
MsG0180005726.01.T01 AT5G10140 50.725 69 33 1 9 76 2 70 2.25e-16 75.1
MsG0180005726.01.T01 AT5G13790 43.011 93 44 1 9 101 2 85 2.55e-16 76.3
MsG0180005726.01.T01 AT3G57390 50.000 68 34 0 9 76 2 69 2.72e-16 76.3
MsG0180005726.01.T01 AT5G13790 51.471 68 33 0 9 76 2 69 3.53e-16 75.9
MsG0180005726.01.T01 AT4G11880 48.611 72 36 1 10 80 3 74 3.86e-16 74.3
MsG0180005726.01.T01 AT4G11880 48.611 72 36 1 10 80 3 74 3.86e-16 74.3
MsG0180005726.01.T01 AT2G22630 47.059 68 36 0 9 76 2 69 4.62e-16 75.1
MsG0180005726.01.T01 AT2G22630 47.059 68 36 0 9 76 2 69 4.62e-16 75.1
MsG0180005726.01.T01 AT1G69120 40.659 91 51 1 9 99 2 89 5.11e-16 75.1
MsG0180005726.01.T01 AT1G28450 29.371 143 95 3 5 141 4 146 5.69e-16 73.9
MsG0180005726.01.T01 AT5G51860 52.239 67 32 0 10 76 3 69 6.47e-16 73.9
MsG0180005726.01.T01 AT5G60910 49.296 71 33 1 9 79 2 69 7.89e-16 74.7
MsG0180005726.01.T01 AT5G51860 52.239 67 32 0 10 76 3 69 8.15e-16 73.9
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 8.20e-16 73.6
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 8.20e-16 73.6
MsG0180005726.01.T01 AT4G11880 48.611 72 36 1 10 80 3 74 9.08e-16 73.9
MsG0180005726.01.T01 AT4G11880 48.611 72 36 1 10 80 3 74 9.08e-16 73.9
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 9.63e-16 73.9
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 9.63e-16 73.9
MsG0180005726.01.T01 AT5G62165 49.254 67 34 0 10 76 3 69 9.63e-16 73.9
MsG0180005726.01.T01 AT1G69120 40.659 91 51 1 9 99 2 89 1.15e-15 74.3
MsG0180005726.01.T01 AT1G26310 47.826 69 35 1 9 76 2 70 1.31e-15 74.3
MsG0180005726.01.T01 AT3G30260 46.377 69 36 1 9 76 2 70 1.53e-15 73.9
MsG0180005726.01.T01 AT5G23260 44.330 97 46 3 2 90 9 105 2.21e-15 73.9
MsG0180005726.01.T01 AT5G23260 44.330 97 46 3 2 90 9 105 2.30e-15 73.6
MsG0180005726.01.T01 AT5G20240 47.143 70 35 1 9 76 2 71 2.87e-15 71.2
MsG0180005726.01.T01 AT5G15800 49.275 69 34 1 9 76 2 70 3.59e-15 72.8
MsG0180005726.01.T01 AT5G23260 45.455 88 42 2 9 90 2 89 4.14e-15 72.4
MsG0180005726.01.T01 AT5G23260 45.455 88 42 2 9 90 2 89 4.77e-15 72.8
MsG0180005726.01.T01 AT2G22540 50.000 68 29 1 9 76 2 64 5.37e-15 72.0
MsG0180005726.01.T01 AT5G20240 47.143 70 35 1 9 76 2 71 5.54e-15 71.6
MsG0180005726.01.T01 AT5G15800 49.275 69 34 1 9 76 2 70 5.93e-15 72.4
MsG0180005726.01.T01 AT1G17310 51.899 79 36 1 8 86 47 123 7.26e-15 71.6
MsG0180005726.01.T01 AT2G14210 46.377 69 36 1 9 76 2 70 9.79e-15 71.6
MsG0180005726.01.T01 AT1G17310 51.899 79 36 1 8 86 58 134 1.02e-14 71.2
MsG0180005726.01.T01 AT2G14210 46.377 69 36 1 9 76 2 70 1.25e-14 71.2
MsG0180005726.01.T01 AT5G65050 28.646 192 120 9 9 193 2 183 1.40e-14 70.1
MsG0180005726.01.T01 AT3G58780 53.333 60 28 0 6 65 14 73 2.22e-14 70.5
MsG0180005726.01.T01 AT3G02310 47.826 69 35 1 9 76 2 70 2.31e-14 69.7
MsG0180005726.01.T01 AT5G65050 29.897 194 112 7 9 193 2 180 2.56e-14 69.3
MsG0180005726.01.T01 AT5G65050 46.377 69 36 1 9 76 2 70 2.58e-14 69.3
MsG0180005726.01.T01 AT3G58780 53.333 60 28 0 6 65 14 73 2.90e-14 70.9
MsG0180005726.01.T01 AT2G03710 47.143 70 35 2 9 76 2 71 4.23e-14 68.9
MsG0180005726.01.T01 AT5G65050 46.377 69 36 1 9 76 2 70 4.91e-14 68.9
MsG0180005726.01.T01 AT1G24260 41.237 97 54 1 9 105 2 95 5.35e-14 69.3
MsG0180005726.01.T01 AT3G02310 47.826 69 35 1 9 76 2 70 6.02e-14 69.7
MsG0180005726.01.T01 AT1G24260 41.237 97 54 1 9 105 2 95 6.09e-14 69.7
MsG0180005726.01.T01 AT2G03710 47.143 70 35 2 9 76 2 71 8.83e-14 69.3
MsG0180005726.01.T01 AT2G03710 47.143 70 35 2 9 76 2 71 8.90e-14 69.3
MsG0180005726.01.T01 AT5G65060 46.377 69 36 1 9 76 2 70 9.26e-14 67.8
MsG0180005726.01.T01 AT1G47760 34.127 126 66 4 9 131 2 113 9.62e-14 67.8
MsG0180005726.01.T01 AT5G65060 46.377 69 36 1 9 76 2 70 1.02e-13 67.8
MsG0180005726.01.T01 AT1G24260 53.571 56 26 0 9 64 2 57 1.15e-13 68.9
MsG0180005726.01.T01 AT5G65060 46.377 69 36 1 9 76 2 70 1.15e-13 67.8
MsG0180005726.01.T01 AT1G71692 44.286 70 38 1 9 77 2 71 1.25e-13 68.2
MsG0180005726.01.T01 AT5G65070 42.029 69 39 1 9 76 2 70 4.12e-13 65.1
MsG0180005726.01.T01 AT5G65070 42.029 69 39 1 9 76 2 70 8.39e-13 65.5
MsG0180005726.01.T01 AT5G65070 42.029 69 39 1 9 76 2 70 1.49e-12 65.1
MsG0180005726.01.T01 AT5G65070 42.029 69 39 1 9 76 2 70 1.55e-12 65.5
MsG0180005726.01.T01 AT5G65070 47.368 57 30 0 9 65 2 58 6.79e-12 63.5
MsG0180005726.01.T01 AT4G37435 40.278 72 42 1 9 79 2 73 1.62e-11 61.6
MsG0180005726.01.T01 AT1G18750 25.806 186 119 6 9 177 2 185 1.71e-11 63.5
MsG0180005726.01.T01 AT1G18750 25.806 186 119 6 9 177 2 185 1.75e-11 63.5
MsG0180005726.01.T01 AT1G69540 32.727 110 66 3 9 117 2 104 1.93e-11 63.2
MsG0180005726.01.T01 AT1G69540 32.727 110 66 3 9 117 2 104 2.14e-11 63.2
MsG0180005726.01.T01 AT1G18750 37.333 75 45 1 9 81 2 76 4.33e-11 62.4
MsG0180005726.01.T01 AT2G26320 40.000 70 40 1 9 76 18 87 4.35e-11 58.5
MsG0180005726.01.T01 AT5G65080 42.029 69 39 1 9 76 9 77 7.09e-11 60.1
MsG0180005726.01.T01 AT2G03060 39.286 84 48 3 9 90 2 84 7.23e-11 61.6
MsG0180005726.01.T01 AT2G03060 39.286 84 48 3 9 90 2 84 7.23e-11 61.6
MsG0180005726.01.T01 AT2G03060 39.286 84 48 3 9 90 2 84 7.23e-11 61.6
MsG0180005726.01.T01 AT2G03060 39.286 84 48 3 9 90 2 84 7.24e-11 61.6

Find 52 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTGGGCTGGTCCCGTTGA+TGG 0.303436 1:-95358018 MsG0180005726.01.T01:CDS
ATTGCATGGTACCATTGTTT+TGG 0.337688 1:+95358175 None:intergenic
ATGTTGCAACCTCACTTGTT+TGG 0.376512 1:-95357781 MsG0180005726.01.T01:CDS
GAGGAGACTAAGAAACTTGT+TGG 0.386198 1:-95357955 MsG0180005726.01.T01:CDS
TGCCGATAGGCTTGTAATCC+AGG 0.392094 1:-95357926 MsG0180005726.01.T01:CDS
GGGCTCAGATCAAAAGAATC+TGG 0.407516 1:+95357720 None:intergenic
TCTTCTCCATGTCCAGTAGC+TGG 0.428165 1:+95358091 None:intergenic
CTTGTTTGGCTTCAACAATA+CGG 0.429938 1:-95357767 MsG0180005726.01.T01:CDS
GTCCCGTTGATGGGATGAAT+AGG 0.432754 1:-95358008 MsG0180005726.01.T01:CDS
GCGGAGGATTTCGCTGATGA+TGG 0.435525 1:+95357842 None:intergenic
GGTGGGCTGGTCCCGTTGAT+GGG 0.452333 1:-95358017 MsG0180005726.01.T01:CDS
TCCCGTTGATGGGATGAATA+GGG 0.453040 1:-95358007 MsG0180005726.01.T01:CDS
AGGCGACCGAGAGTCAGTTT+TGG 0.458130 1:-95358038 MsG0180005726.01.T01:CDS
TTGTTTGGCTTCAACAATAC+GGG 0.463078 1:-95357766 MsG0180005726.01.T01:CDS
GCCCTATTCATCCCATCAAC+GGG 0.481029 1:+95358006 None:intergenic
AGTATTGAGCTCGCGCACAT+TGG 0.504609 1:+95358131 None:intergenic
GACTCAAATCAACCAGCTAC+TGG 0.506083 1:-95358103 MsG0180005726.01.T01:CDS
GTCTATGACCGTATCAACAT+TGG 0.509296 1:+95358221 None:intergenic
GTTGCAAACATTTGAGTTTG+CGG 0.514698 1:+95357823 None:intergenic
GCAGAGAGTGCAAAGCTCAC+TGG 0.516982 1:+95358305 None:intergenic
GGCCCTATTCATCCCATCAA+CGG 0.536262 1:+95358005 None:intergenic
AACAAGTGAGGTTGCAACAT+AGG 0.539918 1:+95357784 None:intergenic
TCTATGACCGTATCAACATT+GGG 0.542196 1:+95358222 None:intergenic
TGGCCAACCCAATGTTGATA+CGG 0.545005 1:-95358229 MsG0180005726.01.T01:CDS
CTTTCTCGAAGCGCCGTAGT+GGG 0.553366 1:-95358341 MsG0180005726.01.T01:CDS
CTTCAACCATGTCGAGTGGA+AGG 0.555433 1:-95358428 None:intergenic
GTGGGACTCGAGAGAGATAA+CGG 0.555728 1:+95358199 None:intergenic
AGCCCACCAAAACTGACTCT+CGG 0.565176 1:+95358032 None:intergenic
AATCAACCAGCTACTGGACA+TGG 0.571929 1:-95358097 MsG0180005726.01.T01:CDS
ACTTTCTCGAAGCGCCGTAG+TGG 0.571963 1:-95358342 MsG0180005726.01.T01:CDS
AATGAAAATACCTTCTCCCC+AGG 0.587583 1:+95358252 None:intergenic
AGAGCTGAGCAACTTGCGCA+AGG 0.589828 1:-95358058 MsG0180005726.01.T01:CDS
GCCGATAGGCTTGTAATCCA+GGG 0.597733 1:-95357925 MsG0180005726.01.T01:CDS
TTGTTGGACATCATGCCGAT+AGG 0.598515 1:-95357939 MsG0180005726.01.T01:CDS
TGACCGTATCAACATTGGGT+TGG 0.600758 1:+95358226 None:intergenic
AGGTTTGAGTAGGAGCACCC+TGG 0.605264 1:+95357908 None:intergenic
ACCCTGGATTACAAGCCTAT+CGG 0.607186 1:+95357924 None:intergenic
CTTTCTTGAAGAGCCCACTA+CGG 0.610979 1:+95358328 None:intergenic
TGTTTGGCTTCAACAATACG+GGG 0.616084 1:-95357765 MsG0180005726.01.T01:CDS
AGTGAGCTTTGCACTCTCTG+CGG 0.622154 1:-95358303 MsG0180005726.01.T01:CDS
TGAGCTTCAACCATGTCGAG+TGG 0.629588 1:-95358432 None:intergenic
GGATTTCGCTGATGATGGAG+AGG 0.633183 1:+95357847 None:intergenic
CTCAGATCAAAAGAATCTGG+AGG 0.633945 1:+95357723 None:intergenic
TGGTACCATGCAATTCATTG+AGG 0.638950 1:-95358166 MsG0180005726.01.T01:CDS
CGAGTCCCACCCCAAAACAA+TGG 0.639467 1:-95358186 MsG0180005726.01.T01:CDS
ATGAGCCTCAATGAATTGCA+TGG 0.640763 1:+95358161 None:intergenic
GCAAACATTTGAGTTTGCGG+AGG 0.647148 1:+95357826 None:intergenic
TTGTTGAAGCCAAACAAGTG+AGG 0.651690 1:+95357772 None:intergenic
TCAGATCAAAAGAATCTGGA+GGG 0.666536 1:+95357724 None:intergenic
TTTGGCTTCAACAATACGGG+GGG 0.687957 1:-95357763 MsG0180005726.01.T01:CDS
TCGAGTGGAAGGAAAAGCCG+AGG 0.691796 1:-95358417 MsG0180005726.01.T01:CDS
GTTTGGCTTCAACAATACGG+GGG 0.701007 1:-95357764 MsG0180005726.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTGAAAAATTCAAGTT+GGG + Chr1:95358168-95358187 None:intergenic 20.0%
!!! TTTTTTTCATCTCAATCTTT+TGG + Chr1:95357761-95357780 None:intergenic 20.0%
! AAAAATTGAAAGGTTTGAGT+AGG + Chr1:95358254-95358273 None:intergenic 25.0%
! ATTTCCACCAAAAAATTGAA+AGG + Chr1:95358264-95358283 None:intergenic 25.0%
!!! ACTCAAACCTTTCAATTTTT+TGG - Chr1:95358254-95358273 MsG0180005726.01.T01:CDS 25.0%
!!! CCAACTTGAATTTTTCAAAA+AGG - Chr1:95358166-95358185 MsG0180005726.01.T01:CDS 25.0%
!!! CCTTTTTGAAAAATTCAAGT+TGG + Chr1:95358169-95358188 None:intergenic 25.0%
!!! TGAATTTTTCAAAAAGGCTT+TGG - Chr1:95358172-95358191 MsG0180005726.01.T01:CDS 25.0%
!!! TTTCAATTTTTTGGTGGAAA+TGG - Chr1:95358263-95358282 MsG0180005726.01.T01:CDS 25.0%
!! ATTTTTCAAAAAGGCTTTGG+AGG - Chr1:95358175-95358194 MsG0180005726.01.T01:CDS 30.0%
!!! CAAACCTTTCAATTTTTTGG+TGG - Chr1:95358257-95358276 MsG0180005726.01.T01:CDS 30.0%
TCTATGACCGTATCAACATT+GGG + Chr1:95357930-95357949 None:intergenic 35.0%
! ATTGCATGGTACCATTGTTT+TGG + Chr1:95357977-95357996 None:intergenic 35.0%
! CTTGTTTGGCTTCAACAATA+CGG - Chr1:95358382-95358401 MsG0180005726.01.T01:CDS 35.0%
! GTTGCAAACATTTGAGTTTG+CGG + Chr1:95358329-95358348 None:intergenic 35.0%
! TTGCATGGTACCATTGTTTT+GGG + Chr1:95357976-95357995 None:intergenic 35.0%
! TTGTTTGGCTTCAACAATAC+GGG - Chr1:95358383-95358402 MsG0180005726.01.T01:CDS 35.0%
AACAAGTGAGGTTGCAACAT+AGG + Chr1:95358368-95358387 None:intergenic 40.0%
AATGAAAATACCTTCTCCCC+AGG + Chr1:95357900-95357919 None:intergenic 40.0%
ATGAGCCTCAATGAATTGCA+TGG + Chr1:95357991-95358010 None:intergenic 40.0%
ATGTTGCAACCTCACTTGTT+TGG - Chr1:95358368-95358387 MsG0180005726.01.T01:CDS 40.0%
GAGGAGACTAAGAAACTTGT+TGG - Chr1:95358194-95358213 MsG0180005726.01.T01:CDS 40.0%
GTCTATGACCGTATCAACAT+TGG + Chr1:95357931-95357950 None:intergenic 40.0%
TGGTACCATGCAATTCATTG+AGG - Chr1:95357983-95358002 MsG0180005726.01.T01:CDS 40.0%
TTGTTGAAGCCAAACAAGTG+AGG + Chr1:95358380-95358399 None:intergenic 40.0%
! TGTTTGGCTTCAACAATACG+GGG - Chr1:95358384-95358403 MsG0180005726.01.T01:CDS 40.0%
!! TGCATGGTACCATTGTTTTG+GGG + Chr1:95357975-95357994 None:intergenic 40.0%
!!! GGGGAGAAGGTATTTTCATT+TGG - Chr1:95357900-95357919 MsG0180005726.01.T01:CDS 40.0%
AATCAACCAGCTACTGGACA+TGG - Chr1:95358052-95358071 MsG0180005726.01.T01:CDS 45.0%
ACCCTGGATTACAAGCCTAT+CGG + Chr1:95358228-95358247 None:intergenic 45.0%
CTTTCTTGAAGAGCCCACTA+CGG + Chr1:95357824-95357843 None:intergenic 45.0%
GACTCAAATCAACCAGCTAC+TGG - Chr1:95358046-95358065 MsG0180005726.01.T01:CDS 45.0%
TGACCGTATCAACATTGGGT+TGG + Chr1:95357926-95357945 None:intergenic 45.0%
TGGCCAACCCAATGTTGATA+CGG - Chr1:95357920-95357939 MsG0180005726.01.T01:CDS 45.0%
TTGTTGGACATCATGCCGAT+AGG - Chr1:95358210-95358229 MsG0180005726.01.T01:CDS 45.0%
! GCAAACATTTGAGTTTGCGG+AGG + Chr1:95358326-95358345 None:intergenic 45.0%
! GTTTGGCTTCAACAATACGG+GGG - Chr1:95358385-95358404 MsG0180005726.01.T01:CDS 45.0%
! TCCCGTTGATGGGATGAATA+GGG - Chr1:95358142-95358161 MsG0180005726.01.T01:CDS 45.0%
! TCTCAATCTTTTGGCGACCT+CGG + Chr1:95357752-95357771 None:intergenic 45.0%
! TTTGGCTTCAACAATACGGG+GGG - Chr1:95358386-95358405 MsG0180005726.01.T01:CDS 45.0%
!! CTCTCGTTGTTTTCTCACCT+GGG - Chr1:95357880-95357899 MsG0180005726.01.T01:CDS 45.0%
!! TCTCGTTGTTTTCTCACCTG+GGG - Chr1:95357881-95357900 MsG0180005726.01.T01:CDS 45.0%
!!! ATGGTACCATTGTTTTGGGG+TGG + Chr1:95357972-95357991 None:intergenic 45.0%
!!! TGGTACCATTGTTTTGGGGT+GGG + Chr1:95357971-95357990 None:intergenic 45.0%
AGTGAGCTTTGCACTCTCTG+CGG - Chr1:95357846-95357865 MsG0180005726.01.T01:CDS 50.0%
GCCCTATTCATCCCATCAAC+GGG + Chr1:95358146-95358165 None:intergenic 50.0%
GCCGATAGGCTTGTAATCCA+GGG - Chr1:95358224-95358243 MsG0180005726.01.T01:CDS 50.0%
GGCCCTATTCATCCCATCAA+CGG + Chr1:95358147-95358166 None:intergenic 50.0%
GTGGGACTCGAGAGAGATAA+CGG + Chr1:95357953-95357972 None:intergenic 50.0%
TCTTCTCCATGTCCAGTAGC+TGG + Chr1:95358061-95358080 None:intergenic 50.0%
TGCCGATAGGCTTGTAATCC+AGG - Chr1:95358223-95358242 MsG0180005726.01.T01:CDS 50.0%
! AGCCCACCAAAACTGACTCT+CGG + Chr1:95358120-95358139 None:intergenic 50.0%
! AGTATTGAGCTCGCGCACAT+TGG + Chr1:95358021-95358040 None:intergenic 50.0%
! GTCCCGTTGATGGGATGAAT+AGG - Chr1:95358141-95358160 MsG0180005726.01.T01:CDS 50.0%
! TGTTTTCTCACCTGGGGAGA+AGG - Chr1:95357887-95357906 MsG0180005726.01.T01:CDS 50.0%
!! GACCGAGAGTCAGTTTTGGT+GGG - Chr1:95358115-95358134 MsG0180005726.01.T01:CDS 50.0%
!! GCTCTCGTTGTTTTCTCACC+TGG - Chr1:95357879-95357898 MsG0180005726.01.T01:CDS 50.0%
!! GGATTTCGCTGATGATGGAG+AGG + Chr1:95358305-95358324 None:intergenic 50.0%
AGAGCTGAGCAACTTGCGCA+AGG - Chr1:95358091-95358110 MsG0180005726.01.T01:CDS 55.0%
CGAGTCCCACCCCAAAACAA+TGG - Chr1:95357963-95357982 MsG0180005726.01.T01:CDS 55.0%
CTTCAACAATACGGGGGGAG+GGG - Chr1:95358391-95358410 MsG0180005726.01.T01:CDS 55.0%
GCGGAGGATTTCGCTGATGA+TGG + Chr1:95358310-95358329 None:intergenic 55.0%
GCTTCAACAATACGGGGGGA+GGG - Chr1:95358390-95358409 MsG0180005726.01.T01:CDS 55.0%
TCGAGTGGAAGGAAAAGCCG+AGG - Chr1:95357732-95357751 MsG0180005726.01.T01:CDS 55.0%
TTCAACAATACGGGGGGAGG+GGG - Chr1:95358392-95358411 MsG0180005726.01.T01:CDS 55.0%
! AGGCGACCGAGAGTCAGTTT+TGG - Chr1:95358111-95358130 MsG0180005726.01.T01:CDS 55.0%
! GCAGAGAGTGCAAAGCTCAC+TGG + Chr1:95357847-95357866 None:intergenic 55.0%
!! ACTTTCTCGAAGCGCCGTAG+TGG - Chr1:95357807-95357826 MsG0180005726.01.T01:CDS 55.0%
!! AGGTTTGAGTAGGAGCACCC+TGG + Chr1:95358244-95358263 None:intergenic 55.0%
!! CGACCGAGAGTCAGTTTTGG+TGG - Chr1:95358114-95358133 MsG0180005726.01.T01:CDS 55.0%
!! CTTTCTCGAAGCGCCGTAGT+GGG - Chr1:95357808-95357827 MsG0180005726.01.T01:CDS 55.0%
!! GAGAGTCAGTTTTGGTGGGC+TGG - Chr1:95358119-95358138 MsG0180005726.01.T01:CDS 55.0%
GGCTTCAACAATACGGGGGG+AGG - Chr1:95358389-95358408 MsG0180005726.01.T01:CDS 60.0%
AACAATACGGGGGGAGGGGG+TGG - Chr1:95358395-95358414 MsG0180005726.01.T01:CDS 65.0%
!! GGTGGGCTGGTCCCGTTGAT+GGG - Chr1:95358132-95358151 MsG0180005726.01.T01:CDS 65.0%
!! TGGTGGGCTGGTCCCGTTGA+TGG - Chr1:95358131-95358150 MsG0180005726.01.T01:CDS 65.0%
ACGGGGGGAGGGGGTGGATA+TGG - Chr1:95358401-95358420 MsG0180005726.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 95357729 95358442 95357729 ID=MsG0180005726.01;Name=MsG0180005726.01
Chr1 mRNA 95357729 95358442 95357729 ID=MsG0180005726.01.T01;Parent=MsG0180005726.01;Name=MsG0180005726.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|237
Chr1 exon 95357729 95358442 95357729 ID=MsG0180005726.01.T01:exon:19360;Parent=MsG0180005726.01.T01
Chr1 CDS 95357729 95358442 95357729 ID=MsG0180005726.01.T01:cds;Parent=MsG0180005726.01.T01
Gene Sequence

>MsG0180005726.01.T01

ATGTCGAGTGGAAGGAAAAGCCGAGGTCGCCAAAAGATTGAGATGAAAAAAATGAGCAACGAGAGCAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCCAGTGAGCTTTGCACTCTCTGCGGTGCAGATGTTGCTCTCGTTGTTTTCTCACCTGGGGAGAAGGTATTTTCATTTGGCCAACCCAATGTTGATACGGTCATAGACCGTTATCTCTCTCGAGTCCCACCCCAAAACAATGGTACCATGCAATTCATTGAGGCTCATCGTAGCGCCAATGTGCGCGAGCTCAATACTCAGCTGACTCAAATCAACCAGCTACTGGACATGGAGAAGAAACGTGCTGAAGAGCTGAGCAACTTGCGCAAGGCGACCGAGAGTCAGTTTTGGTGGGCTGGTCCCGTTGATGGGATGAATAGGGCCCAACTTGAATTTTTCAAAAAGGCTTTGGAGGAGACTAAGAAACTTGTTGGACATCATGCCGATAGGCTTGTAATCCAGGGTGCTCCTACTCAAACCTTTCAATTTTTTGGTGGAAATGGTTCATCTTCTAACATGCCTCTCCATCATCAGCGAAATCCTCCGCAAACTCAAATGTTTGCAACACAGTTTTTTCAGAATCCTATGTTGCAACCTCACTTGTTTGGCTTCAACAATACGGGGGGAGGGGGTGGATATGGACCCTCCAGATTCTTTTGA

Protein sequence

>MsG0180005726.01.T01

MSSGRKSRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGADVALVVFSPGEKVFSFGQPNVDTVIDRYLSRVPPQNNGTMQFIEAHRSANVRELNTQLTQINQLLDMEKKRAEELSNLRKATESQFWWAGPVDGMNRAQLEFFKKALEETKKLVGHHADRLVIQGAPTQTFQFFGGNGSSSNMPLHHQRNPPQTQMFATQFFQNPMLQPHLFGFNNTGGGGGYGPSRFF*