AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005771.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005771.01.T01 MTR_1g106735 97.078 616 5 4 1 603 1 616 0.0 1185
MsG0180005771.01.T01 MTR_1g106735 96.921 617 5 5 1 603 1 617 0.0 1180
MsG0180005771.01.T01 MTR_1g018440 44.249 626 265 16 25 603 31 619 1.62e-126 386
MsG0180005771.01.T01 MTR_4g130490 33.491 636 315 14 23 600 27 612 7.08e-73 245
MsG0180005771.01.T01 MTR_4g130490 33.387 617 309 13 25 586 29 598 5.08e-67 230
MsG0180005771.01.T01 MTR_2g028220 40.777 206 122 0 392 597 275 480 4.41e-46 170
MsG0180005771.01.T01 MTR_4g130490 31.752 548 272 13 25 517 29 529 8.71e-46 170
MsG0180005771.01.T01 MTR_2g090050 28.346 254 156 4 356 597 244 483 2.90e-28 119
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005771.01.T01 AT3G19570 54.000 650 241 15 1 599 1 643 0.0 554
MsG0180005771.01.T01 AT1G49890 56.646 632 214 17 25 601 24 650 0.0 548
MsG0180005771.01.T01 AT3G19570 53.397 633 237 15 1 582 1 626 3.49e-179 521
MsG0180005771.01.T01 AT3G19570 53.833 600 219 15 1 549 1 593 1.44e-165 485
MsG0180005771.01.T01 AT3G19570 53.833 600 219 15 1 549 1 593 1.44e-165 485
MsG0180005771.01.T01 AT4G30710 36.164 636 321 20 22 599 15 623 2.62e-74 250
MsG0180005771.01.T01 AT4G30710 36.164 636 321 20 22 599 15 623 2.62e-74 250
MsG0180005771.01.T01 AT4G30710 35.849 636 323 20 22 599 15 623 1.87e-72 245
MsG0180005771.01.T01 AT4G30710 35.577 624 315 21 23 587 16 611 1.21e-67 231
MsG0180005771.01.T01 AT2G24070 46.442 267 134 5 330 596 327 584 8.09e-64 221
MsG0180005771.01.T01 AT2G24070 46.442 267 134 5 330 596 327 584 8.09e-64 221
MsG0180005771.01.T01 AT2G24070 46.442 267 134 5 330 596 327 584 8.09e-64 221
MsG0180005771.01.T01 AT5G43160 45.385 260 124 4 343 597 14 260 1.50e-54 186
MsG0180005771.01.T01 AT5G43160 45.385 260 124 4 343 597 14 260 1.50e-54 186
MsG0180005771.01.T01 AT2G44190 35.266 207 134 0 390 596 254 460 3.00e-34 136
MsG0180005771.01.T01 AT4G25190 31.884 207 138 1 390 596 185 388 8.40e-31 125
MsG0180005771.01.T01 AT3G60000 32.683 205 138 0 392 596 237 441 3.54e-30 124
MsG0180005771.01.T01 AT4G25190 32.212 208 137 2 390 596 185 389 1.09e-29 121
MsG0180005771.01.T01 AT3G60000 33.166 199 133 0 392 590 237 435 4.37e-26 112
MsG0180005771.01.T01 AT2G20815 29.630 189 133 0 407 595 280 468 7.17e-21 96.7
MsG0180005771.01.T01 AT2G20815 29.630 189 133 0 407 595 203 391 2.44e-20 94.0
MsG0180005771.01.T01 AT2G20815 29.474 190 133 1 407 595 280 469 4.72e-20 94.0
MsG0180005771.01.T01 AT2G20815 29.474 190 133 1 407 595 251 440 6.56e-20 93.2

Find 173 sgRNAs with CRISPR-Local

Find 471 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAAAGCATCCTTCAAATT+TGG 0.188270 1:+95986745 None:intergenic
GGTGGTTTGAGTTTGGATTT+AGG 0.216790 1:-95989664 MsG0180005771.01.T01:CDS
GTTTCATCTGGTAGTAATTC+AGG 0.256359 1:-95989577 MsG0180005771.01.T01:CDS
TGGAGTGATCTCTATCTAAA+AGG 0.259865 1:+95986926 None:intergenic
CAGATCAAGGAGATGGAAAA+TGG 0.272626 1:+95990443 None:intergenic
GAACAATGGCTTCTCCTATA+AGG 0.275967 1:-95989336 MsG0180005771.01.T01:CDS
TCGGACCTTGAAGAGGTTAA+TGG 0.277588 1:+95990309 None:intergenic
TAGGGCTGATGCTACCTTTA+TGG 0.280214 1:-95989059 MsG0180005771.01.T01:CDS
TTCTTCTCTTGGTGCTCTTA+AGG 0.288420 1:-95989542 MsG0180005771.01.T01:CDS
AGCTTAGTTGCTTCAGGAAC+TGG 0.294871 1:+95990006 None:intergenic
GTGGTTTGAGTTTGGATTTA+GGG 0.299941 1:-95989663 MsG0180005771.01.T01:CDS
ACTAGAAGCTTAGTTGCTTC+AGG 0.301397 1:+95990000 None:intergenic
TTTCCTTTGATGTTACCTTT+AGG 0.315468 1:+95984442 None:intergenic
AGCACCATCAATAGTAATTC+TGG 0.315641 1:-95989211 MsG0180005771.01.T01:CDS
CCTTGAGGCTTCTTTATAAT+CGG 0.320789 1:-95989108 MsG0180005771.01.T01:CDS
CCAAATTTGAAGGATGCTTT+GGG 0.327684 1:-95986745 MsG0180005771.01.T01:CDS
TCGCTCGGGCGTGACGGCTT+TGG 0.331036 1:+95989906 None:intergenic
TTCAATTGAGAATTCTTAGA+TGG 0.340099 1:+95989394 None:intergenic
TGGATTAGGTGGTTTGAGTT+TGG 0.343953 1:-95989671 MsG0180005771.01.T01:CDS
TTGTTGTTTCTTCCAAGTTT+TGG 0.344914 1:-95989498 MsG0180005771.01.T01:CDS
TGCTTCGCCTAGTAAACTTT+GGG 0.353710 1:-95989299 MsG0180005771.01.T01:CDS
AGGGTTACTCCTTCTGTTGC+TGG 0.353956 1:-95989880 MsG0180005771.01.T01:CDS
AAGGTAGACAAATTTCTTCT+AGG 0.355993 1:-95990236 MsG0180005771.01.T01:CDS
CACAATTACCTTGTCATTTG+AGG 0.362417 1:-95983937 MsG0180005771.01.T01:three_prime_UTR
GAGAGTAGTGTGTTAGCATT+AGG 0.369092 1:+95984176 None:intergenic
GATGTGAGGAGAGGGAAGAT+AGG 0.370807 1:-95989157 MsG0180005771.01.T01:CDS
AACAATGGCTTCTCCTATAA+GGG 0.371871 1:-95989335 MsG0180005771.01.T01:CDS
GCTTCAGGAACTGGGGTTGT+TGG 0.372115 1:+95990015 None:intergenic
TCTGTCATAGATTTCGTATT+TGG 0.372884 1:-95986959 MsG0180005771.01.T01:intron
GCCAAATTTGAAGGATGCTT+TGG 0.381622 1:-95986746 MsG0180005771.01.T01:CDS
CTGCTTCGCCTAGTAAACTT+TGG 0.382076 1:-95989300 MsG0180005771.01.T01:CDS
CGGACCTTGAAGAGGTTAAT+GGG 0.382603 1:+95990310 None:intergenic
TCAACTAATTATTGTTTAGT+AGG 0.384834 1:-95983877 MsG0180005771.01.T01:three_prime_UTR
TAGATCTTCATTTGAATCAA+TGG 0.388446 1:-95983842 MsG0180005771.01.T01:three_prime_UTR
ACTACCAGAATTACTATTGA+TGG 0.390905 1:+95989207 None:intergenic
ACTGGGGTTGTTGGTCTAGT+AGG 0.393105 1:+95990024 None:intergenic
ATTCAATTTCTGCACCATAA+AGG 0.395029 1:+95989045 None:intergenic
AGATTTCGTATTTGGAAGAA+TGG 0.403042 1:-95986951 MsG0180005771.01.T01:CDS
ACCGCACTTCTCACCTTAGA+AGG 0.413339 1:+95989238 None:intergenic
GGAGGACATGATTCTTCTCT+TGG 0.413368 1:-95989553 MsG0180005771.01.T01:CDS
TGGAGCAACTGAAGCTTTGA+GGG 0.413983 1:-95986893 MsG0180005771.01.T01:CDS
ATTGATTCAAATGAAGATCT+AGG 0.416498 1:+95983844 None:intergenic
ACTCCTTCTGTTGCTGGAAA+AGG 0.416734 1:-95989874 MsG0180005771.01.T01:CDS
TGTTGCTGGAAAAGGAGATC+AGG 0.418627 1:-95989866 MsG0180005771.01.T01:CDS
TTGTGTTAAATAAAAGGCTT+GGG 0.419711 1:+95984154 None:intergenic
TGGCAGCCACCATTGCAAAA+AGG 0.419726 1:+95990343 None:intergenic
GTAATAAGAATGGAATGAAA+TGG 0.421078 1:-95984125 MsG0180005771.01.T01:three_prime_UTR
ATGTGAGGAGAGGGAAGATA+GGG 0.425121 1:-95989156 MsG0180005771.01.T01:CDS
TGTCAACTAGTCCTGCTTCA+AGG 0.428045 1:-95989426 MsG0180005771.01.T01:CDS
TTGGAGCAACTGAAGCTTTG+AGG 0.430391 1:-95986894 MsG0180005771.01.T01:CDS
TTGTCAAGGAGTGTGGATTA+TGG 0.432192 1:-95989772 MsG0180005771.01.T01:CDS
ATTAGTTTCCTGCCAAAACT+TGG 0.432197 1:+95989486 None:intergenic
TTTGTGTTAAATAAAAGGCT+TGG 0.432649 1:+95984153 None:intergenic
CGGCCGCGTCTTCTCCATCA+AGG 0.438254 1:-95989273 MsG0180005771.01.T01:CDS
ACGTGCATTGCAACAATCAA+TGG 0.441612 1:-95989728 MsG0180005771.01.T01:CDS
GAAGCTCACTTCCATTCTAA+AGG 0.443325 1:-95987144 MsG0180005771.01.T01:CDS
ATAGGAGAAGCCATTGTTCT+CGG 0.444207 1:+95989340 None:intergenic
AAAACCCATTAACCTCTTCA+AGG 0.445016 1:-95990314 MsG0180005771.01.T01:CDS
GATCACTCCAGTTCTGTACT+TGG 0.448053 1:-95986913 MsG0180005771.01.T01:CDS
AAGCTCACTTCCATTCTAAA+GGG 0.450607 1:-95987143 MsG0180005771.01.T01:CDS
GATTTCGTATTTGGAAGAAT+GGG 0.462408 1:-95986950 MsG0180005771.01.T01:CDS
AGTTGCTCCAAGTACAGAAC+TGG 0.464733 1:+95986906 None:intergenic
GTCTTCCTTAGCAGCCATGC+AGG 0.464763 1:-95984388 MsG0180005771.01.T01:intron
GAGGGAAGATAGGGGAAGAT+CGG 0.465345 1:-95989147 MsG0180005771.01.T01:CDS
GATACTGATAGTGTTTCATC+TGG 0.465719 1:-95989589 MsG0180005771.01.T01:CDS
AGGAGTAACCCTCCGTCGCT+CGG 0.468094 1:+95989891 None:intergenic
TCCACAGATTGAGAACGTTT+AGG 0.471876 1:+95990057 None:intergenic
TATTGTGCCAGACACATTTG+TGG 0.473093 1:-95987247 MsG0180005771.01.T01:intron
CTAAGAATTCTCAATTGAAA+AGG 0.473711 1:-95989390 MsG0180005771.01.T01:CDS
GATCTTGTAACCGTCGCAAC+CGG 0.476233 1:+95989461 None:intergenic
TGAATATTACAGTTTACAAA+AGG 0.476413 1:-95984018 MsG0180005771.01.T01:three_prime_UTR
CCTCCGTCGCTCGGGCGTGA+CGG 0.480235 1:+95989900 None:intergenic
ACAAAAGAAGGTAATAAGAA+TGG 0.480856 1:-95984135 MsG0180005771.01.T01:three_prime_UTR
ATTGCAACAATCAATGGTTA+TGG 0.481272 1:-95989722 MsG0180005771.01.T01:CDS
AATATATTCTCTTTCGTCAA+AGG 0.483985 1:-95986686 MsG0180005771.01.T01:intron
AATTACCTGCATGGCTGCTA+AGG 0.485298 1:+95984383 None:intergenic
GAACGTTTAGGAACAGCAAC+TGG 0.487944 1:+95990069 None:intergenic
GGAGTAACCCTCCGTCGCTC+GGG 0.488109 1:+95989892 None:intergenic
CAAAGTTTACTAGGCGAAGC+AGG 0.490635 1:+95989301 None:intergenic
GGCCGATGTGCCAAATTTGA+AGG 0.491490 1:-95986755 MsG0180005771.01.T01:CDS
GGTGTCTTACCCAGAAGAAA+AGG 0.494191 1:-95990255 MsG0180005771.01.T01:CDS
GCTTAGTTGCTTCAGGAACT+GGG 0.495641 1:+95990007 None:intergenic
TTCGTCTGTCTCGACCGTGC+TGG 0.497570 1:+95989808 None:intergenic
ATTGTTCTCGGCGACATCAT+AGG 0.500035 1:+95989352 None:intergenic
CCGTCACGCCCGAGCGACGG+AGG 0.501605 1:-95989900 MsG0180005771.01.T01:CDS
CATTAGGAGTGAGAGCTGTC+AGG 0.502465 1:+95984192 None:intergenic
TCATACCTGTCCCTTTAGAA+TGG 0.505039 1:+95987133 None:intergenic
CACTTCCATTCTAAAGGGAC+AGG 0.505084 1:-95987138 MsG0180005771.01.T01:intron
TGTGAGGAGAGGGAAGATAG+GGG 0.511599 1:-95989155 MsG0180005771.01.T01:CDS
TTGCGACGGTTACAAGATCC+TGG 0.512298 1:-95989457 MsG0180005771.01.T01:CDS
GGGTAACAATCTCAGAGCTT+CGG 0.513713 1:-95987217 MsG0180005771.01.T01:CDS
CGTGTTTGTTGTTAAGAAGC+TGG 0.515177 1:+95984238 None:intergenic
GGAGTGATCTCTATCTAAAA+GGG 0.516540 1:+95986927 None:intergenic
TATGAAAATGATGCAGATCA+AGG 0.517567 1:+95990430 None:intergenic
GGCCGCGTCTTCTCCATCAA+GGG 0.521726 1:-95989272 MsG0180005771.01.T01:CDS
AGTGGCGGTTCGTTAATGCT+AGG 0.522088 1:-95989078 MsG0180005771.01.T01:CDS
AAGACATTCAAGACCACACT+AGG 0.525602 1:+95984064 None:intergenic
AGATCAAGGAGATGGAAAAT+GGG 0.531888 1:+95990444 None:intergenic
GCCGATGCCCAAAGTTTACT+AGG 0.536738 1:+95989292 None:intergenic
AAGCGGAAGACGGAGAGTAC+TGG 0.537073 1:+95986870 None:intergenic
GTAGTAGAAGATGAAGGTGA+AGG 0.537090 1:+95990204 None:intergenic
AACTGTAATATTCAGACACA+TGG 0.540278 1:+95984027 None:intergenic
AGGAGTGTGGATTATGGTGG+TGG 0.540991 1:-95989766 MsG0180005771.01.T01:CDS
AATGATGCAGATCAAGGAGA+TGG 0.543528 1:+95990436 None:intergenic
AAGCCGTCACGCCCGAGCGA+CGG 0.544375 1:-95989903 MsG0180005771.01.T01:CDS
TGAAATGGAGAGTCAATAGC+TGG 0.544778 1:-95984110 MsG0180005771.01.T01:three_prime_UTR
CTAGTTGACAAAGGTGAACC+AGG 0.547216 1:+95989439 None:intergenic
GCCTAGTAAACTTTGGGCAT+CGG 0.549879 1:-95989293 MsG0180005771.01.T01:CDS
GGGTGAGAATTCTCGACCCT+CGG 0.550686 1:-95989845 MsG0180005771.01.T01:CDS
GATCCTAAAGGTAACATCAA+AGG 0.551636 1:-95984445 MsG0180005771.01.T01:CDS
AAGGAGATGGAAAATGGGTA+TGG 0.554030 1:+95990449 None:intergenic
AGACACATTTGTGGAACGCA+TGG 0.555732 1:-95987238 MsG0180005771.01.T01:CDS
TGACGAAAGAGAATATATTG+AGG 0.555766 1:+95986690 None:intergenic
AGCTTCTAGTAACTTCTACT+AGG 0.562199 1:-95989987 MsG0180005771.01.T01:CDS
GGCCATCGATGTTGATCCGA+GGG 0.562459 1:+95989829 None:intergenic
ATCCTTCAAATTTGGCACAT+CGG 0.562988 1:+95986753 None:intergenic
TTGAAAAGGTATAATAGTGA+TGG 0.563089 1:-95989376 MsG0180005771.01.T01:CDS
TTTATAATCGGTATGTGCAG+TGG 0.564571 1:-95989096 MsG0180005771.01.T01:CDS
AGAAACTAACTGCTTGGTAG+CGG 0.566204 1:-95984469 MsG0180005771.01.T01:CDS
CTGGTTTCTGAAACCTAGTG+TGG 0.566830 1:-95984077 MsG0180005771.01.T01:three_prime_UTR
GGTGGAAGAAACTAACTGCT+TGG 0.567202 1:-95984475 MsG0180005771.01.T01:CDS
GTGGCGGTTCGTTAATGCTA+GGG 0.567334 1:-95989077 MsG0180005771.01.T01:CDS
CTTGGTAGCGGAGATCCTAA+AGG 0.567653 1:-95984457 MsG0180005771.01.T01:CDS
CATACTTAAAAGAATCAAGC+TGG 0.569013 1:-95987186 MsG0180005771.01.T01:CDS
AAACTAATAGCCGGTTGCGA+CGG 0.570365 1:-95989471 MsG0180005771.01.T01:CDS
TCTGGTAGTAATTCAGGAGG+AGG 0.571827 1:-95989571 MsG0180005771.01.T01:CDS
GGAACACTGATCCTTGAAGC+AGG 0.572088 1:+95989415 None:intergenic
TAAAGGTAACATCAAAGGAA+AGG 0.572684 1:-95984440 MsG0180005771.01.T01:CDS
TCCTAAACGTTCTCAATCTG+TGG 0.572807 1:-95990058 MsG0180005771.01.T01:CDS
AACATGATTAATTACCTGCA+TGG 0.573163 1:+95984374 None:intergenic
TAATCACTTGTCAAGGAGTG+TGG 0.573713 1:-95989779 MsG0180005771.01.T01:CDS
GCCGCGTCTTCTCCATCAAG+GGG 0.573829 1:-95989271 MsG0180005771.01.T01:CDS
CAATCAATGGTTATGGAGAG+TGG 0.577511 1:-95989715 MsG0180005771.01.T01:CDS
TTGGTCTAGTAGGTCTCCTA+CGG 0.582221 1:+95990034 None:intergenic
TCTCTGCTGATGTGAGGAGA+GGG 0.582663 1:-95989165 MsG0180005771.01.T01:CDS
TGGTGCTCTTAAGGTTCCGA+GGG 0.583555 1:-95989533 MsG0180005771.01.T01:CDS
TTGGTGCTCTTAAGGTTCCG+AGG 0.585399 1:-95989534 MsG0180005771.01.T01:CDS
TTTGGCAGGAAACTAATAGC+CGG 0.585914 1:-95989480 MsG0180005771.01.T01:CDS
CAAATTTGAAGGATGCTTTG+GGG 0.586178 1:-95986744 MsG0180005771.01.T01:CDS
TTTGTTGAACGTGACAAAAG+TGG 0.591548 1:+95990108 None:intergenic
GCAGAGAAGCTAAGAATCGA+AGG 0.600641 1:+95989181 None:intergenic
GTTGCTGGAAAAGGAGATCA+GGG 0.602561 1:-95989865 MsG0180005771.01.T01:CDS
GACACATTTGTGGAACGCAT+GGG 0.604555 1:-95987237 MsG0180005771.01.T01:CDS
CTTAGTTGCTTCAGGAACTG+GGG 0.613191 1:+95990008 None:intergenic
TTAGCTTCTCTGCTGATGTG+AGG 0.614958 1:-95989171 MsG0180005771.01.T01:CDS
TTCTCTGCTGATGTGAGGAG+AGG 0.616254 1:-95989166 MsG0180005771.01.T01:CDS
GTAGTTGTAGTAGAAGATGA+AGG 0.617427 1:+95990198 None:intergenic
CGTCACGCCCGAGCGACGGA+GGG 0.617700 1:-95989899 MsG0180005771.01.T01:CDS
ACAATGGCTTCTCCTATAAG+GGG 0.618237 1:-95989334 MsG0180005771.01.T01:CDS
CCGATTATAAAGAAGCCTCA+AGG 0.620534 1:+95989108 None:intergenic
GACCCTCGGATCAACATCGA+TGG 0.621872 1:-95989831 MsG0180005771.01.T01:CDS
TATGATGTCGCCGAGAACAA+TGG 0.622791 1:-95989350 MsG0180005771.01.T01:CDS
ATCAACATCGATGGCCAGCA+CGG 0.623663 1:-95989822 MsG0180005771.01.T01:CDS
TGGCCATCGATGTTGATCCG+AGG 0.626413 1:+95989828 None:intergenic
ACAATACCACGATTCTCCCT+CGG 0.627520 1:+95989517 None:intergenic
ACACGAATAATCACTTGTCA+AGG 0.628818 1:-95989786 MsG0180005771.01.T01:CDS
ATAATCGGTATGTGCAGTGG+CGG 0.629433 1:-95989093 MsG0180005771.01.T01:CDS
GCTATGAAGGTAACAATGTG+AGG 0.635179 1:-95990377 MsG0180005771.01.T01:five_prime_UTR
GTTCTCAATCTGTGGACCGT+AGG 0.639687 1:-95990050 MsG0180005771.01.T01:CDS
TATTTGATGCGCATACCTTG+AGG 0.640450 1:-95989123 MsG0180005771.01.T01:CDS
GTTGATGTCGGACCTTGAAG+AGG 0.646479 1:+95990302 None:intergenic
GAATCAAGCTGGTATTGCTG+AGG 0.652510 1:-95987175 MsG0180005771.01.T01:CDS
TCAAGGAGTGTGGATTATGG+TGG 0.654553 1:-95989769 MsG0180005771.01.T01:CDS
TCATCTGGTAGTAATTCAGG+AGG 0.661500 1:-95989574 MsG0180005771.01.T01:CDS
TCCTTCTAAGGTGAGAAGTG+CGG 0.663663 1:-95989239 MsG0180005771.01.T01:CDS
GGTGCAGAAATTGAATGCAG+AGG 0.668752 1:-95989038 MsG0180005771.01.T01:intron
AGTTGATGTGATGCAAGCAA+TGG 0.677922 1:-95986716 MsG0180005771.01.T01:CDS
CAATGGCTTCTCCTATAAGG+GGG 0.682052 1:-95989333 MsG0180005771.01.T01:CDS
ACTGTAATATTCAGACACAT+GGG 0.683266 1:+95984028 None:intergenic
TGCTTGCATCACATCAACTG+CGG 0.686412 1:+95986720 None:intergenic
GAAGCAGGACTAGTTGACAA+AGG 0.688663 1:+95989430 None:intergenic
CCGCGTCTTCTCCATCAAGG+GGG 0.711272 1:-95989270 MsG0180005771.01.T01:CDS
AAGGTTCCGAGGGAGAATCG+TGG 0.721748 1:-95989523 MsG0180005771.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAATAAAATCTATGA+TGG + Chr1:95988826-95988845 None:intergenic 10.0%
!! AATAAATATGATCTATTAAA+GGG + Chr1:95987898-95987917 None:intergenic 10.0%
!! TTATAATAACAATCAATAAA+TGG + Chr1:95987789-95987808 None:intergenic 10.0%
!! AAAATTAATCAAAGATATCT+TGG - Chr1:95988281-95988300 MsG0180005771.01.T01:intron 15.0%
!! ACTATAAATAATTATCAACA+AGG - Chr1:95985784-95985803 MsG0180005771.01.T01:intron 15.0%
!! CAATAAATATGATCTATTAA+AGG + Chr1:95987899-95987918 None:intergenic 15.0%
!! TAGTTAAATTCAAATTGATT+TGG - Chr1:95988108-95988127 MsG0180005771.01.T01:intron 15.0%
!! TATTGTAAAAAAGCTTAAAT+CGG + Chr1:95986803-95986822 None:intergenic 15.0%
!!! CAGAAAATTTAAAATCTTAA+AGG - Chr1:95987996-95988015 MsG0180005771.01.T01:intron 15.0%
!!! CTTTTTTTTTTGAAAAATAG+AGG - Chr1:95986074-95986093 MsG0180005771.01.T01:intron 15.0%
!!! TTTTCAAATATATGATGAAA+AGG - Chr1:95988871-95988890 MsG0180005771.01.T01:intron 15.0%
!!! TTTTCATCATATATTTGAAA+AGG + Chr1:95988872-95988891 None:intergenic 15.0%
!! AAAAACTATAATATCGAACA+TGG + Chr1:95985304-95985323 None:intergenic 20.0%
!! ACACAGCTAAAAAAAATATT+TGG + Chr1:95988511-95988530 None:intergenic 20.0%
!! AGCTAAAAAAAATATTTGGT+AGG + Chr1:95988507-95988526 None:intergenic 20.0%
!! AGTTATTATATTCAGAGATA+AGG - Chr1:95986626-95986645 MsG0180005771.01.T01:intron 20.0%
!! ATACTTAAAAAACAAGAACA+AGG + Chr1:95988546-95988565 None:intergenic 20.0%
!! ATTGTAAAAAAGCTTAAATC+GGG + Chr1:95986802-95986821 None:intergenic 20.0%
!! GTTCTTATCTAAAAATATTG+TGG - Chr1:95989978-95989997 MsG0180005771.01.T01:CDS 20.0%
!! TAATAACATGTATAAGTAGA+AGG + Chr1:95986220-95986239 None:intergenic 20.0%
!! TACAATATATTGTATAGTCA+GGG + Chr1:95986424-95986443 None:intergenic 20.0%
!! TACTTAAAAAACAAGAACAA+GGG + Chr1:95988545-95988564 None:intergenic 20.0%
!! TCAACTAATTATTGTTTAGT+AGG - Chr1:95990413-95990432 MsG0180005771.01.T01:five_prime_UTR 20.0%
!! TGAATATTACAGTTTACAAA+AGG - Chr1:95990272-95990291 MsG0180005771.01.T01:CDS 20.0%
!!! AGTGTTTAAAATTTATAGTC+TGG - Chr1:95987675-95987694 MsG0180005771.01.T01:intron 20.0%
!!! CAGACTATTTTAAATTAGTA+TGG + Chr1:95987486-95987505 None:intergenic 20.0%
!!! CTTCTTTTGTGTTAAATAAA+AGG + Chr1:95990145-95990164 None:intergenic 20.0%
!!! CTTTTATTTAACACAAAAGA+AGG - Chr1:95990143-95990162 MsG0180005771.01.T01:CDS 20.0%
!!! GCTTTTTTACAATACTTTAT+AGG - Chr1:95986809-95986828 MsG0180005771.01.T01:intron 20.0%
!!! TCAATGATTAAATGCTTTTA+TGG - Chr1:95986864-95986883 MsG0180005771.01.T01:CDS 20.0%
!!! TGAACTGTTATTTTTTTATC+AGG - Chr1:95987514-95987533 MsG0180005771.01.T01:intron 20.0%
!!! TGCTTTTTGATAAAGTAAAA+TGG + Chr1:95989009-95989028 None:intergenic 20.0%
!!! TTAAATAAGCAATTGGATTT+TGG + Chr1:95989385-95989404 None:intergenic 20.0%
!!! TTGATTGTTATTATAATCCT+TGG - Chr1:95987793-95987812 MsG0180005771.01.T01:intron 20.0%
!!! TTTTAGATTAGAGTCATAAT+TGG - Chr1:95987235-95987254 MsG0180005771.01.T01:CDS 20.0%
! AATAAGCTAAGAACAATGTA+TGG + Chr1:95989247-95989266 None:intergenic 25.0%
! AATATATTCTCTTTCGTCAA+AGG - Chr1:95987604-95987623 MsG0180005771.01.T01:intron 25.0%
! AATGTACTTCTACAATGTTT+AGG - Chr1:95986939-95986958 MsG0180005771.01.T01:CDS 25.0%
! ACAAAAGAAGGTAATAAGAA+TGG - Chr1:95990155-95990174 MsG0180005771.01.T01:CDS 25.0%
! ACAATATATTGTATAGTCAG+GGG + Chr1:95986423-95986442 None:intergenic 25.0%
! ACAATCAATAAATGGTAGAA+TGG + Chr1:95987781-95987800 None:intergenic 25.0%
! ACATAGCTAAAAATAACGTA+TGG + Chr1:95989501-95989520 None:intergenic 25.0%
! AGAATTTAAACAATCTATCC+AGG + Chr1:95988702-95988721 None:intergenic 25.0%
! ATAGATAGAAGGTTTATGAT+AGG + Chr1:95986598-95986617 None:intergenic 25.0%
! CCATGTGTAAGTATTATTAT+CGG + Chr1:95986987-95987006 None:intergenic 25.0%
! CTAAGAATTCTCAATTGAAA+AGG - Chr1:95984900-95984919 MsG0180005771.01.T01:intron 25.0%
! CTACAATATATTGTATAGTC+AGG + Chr1:95986425-95986444 None:intergenic 25.0%
! CTATTAAAGGGTAATGAAAT+GGG + Chr1:95987886-95987905 None:intergenic 25.0%
! CTGTTAGGATATAGAATAAA+GGG + Chr1:95986311-95986330 None:intergenic 25.0%
! GAACATTAGTACAAATCATT+TGG + Chr1:95985828-95985847 None:intergenic 25.0%
! GAGTACAGTTAATAATAAGT+TGG + Chr1:95989044-95989063 None:intergenic 25.0%
! GATAAAATCTTAACCAATCA+AGG + Chr1:95987745-95987764 None:intergenic 25.0%
! GTAATAAGAATGGAATGAAA+TGG - Chr1:95990165-95990184 MsG0180005771.01.T01:CDS 25.0%
! TAAGTTAAGCTGTAGAATAA+AGG + Chr1:95986739-95986758 None:intergenic 25.0%
! TAGAGGAAAAAAAAGAGAAT+AGG - Chr1:95986091-95986110 MsG0180005771.01.T01:intron 25.0%
! TAGATCTTCATTTGAATCAA+TGG - Chr1:95990448-95990467 MsG0180005771.01.T01:five_prime_UTR 25.0%
! TCTATTAAAGGGTAATGAAA+TGG + Chr1:95987887-95987906 None:intergenic 25.0%
! TCTGTTAGGATATAGAATAA+AGG + Chr1:95986312-95986331 None:intergenic 25.0%
! TTATCTAAAAATATTGTGGC+AGG - Chr1:95989982-95990001 MsG0180005771.01.T01:CDS 25.0%
! TTCAATTGAGAATTCTTAGA+TGG + Chr1:95984899-95984918 None:intergenic 25.0%
! TTGTGTTAAATAAAAGGCTT+GGG + Chr1:95990139-95990158 None:intergenic 25.0%
! TTTACAATAAGCCAATTGAA+TGG - Chr1:95986344-95986363 MsG0180005771.01.T01:intron 25.0%
! TTTGTGTTAAATAAAAGGCT+TGG + Chr1:95990140-95990159 None:intergenic 25.0%
!! ATTGATTCAAATGAAGATCT+AGG + Chr1:95990449-95990468 None:intergenic 25.0%
!! CAAAACATTTTCTCACTATA+TGG - Chr1:95988982-95989001 MsG0180005771.01.T01:intron 25.0%
!! CATATAGTGAGAAAATGTTT+TGG + Chr1:95988984-95989003 None:intergenic 25.0%
!! CATTCTTCTCAATTTTTCTT+GGG + Chr1:95986052-95986071 None:intergenic 25.0%
!! GAAACTCATTTTGCATTTAT+TGG - Chr1:95985616-95985635 MsG0180005771.01.T01:intron 25.0%
!! GTAAACTAACAAGCTAATTT+TGG + Chr1:95987857-95987876 None:intergenic 25.0%
!! TCATTCTTCTCAATTTTTCT+TGG + Chr1:95986053-95986072 None:intergenic 25.0%
!! TTGAAAAGGTATAATAGTGA+TGG - Chr1:95984914-95984933 MsG0180005771.01.T01:intron 25.0%
!! TTGCTTATTTAAAACCTGTT+TGG - Chr1:95989393-95989412 MsG0180005771.01.T01:CDS 25.0%
!!! ACAGGTTTTAAATAAGCAAT+TGG + Chr1:95989392-95989411 None:intergenic 25.0%
!!! ACCTGGTATTTTATTGATTT+AGG - Chr1:95986389-95986408 MsG0180005771.01.T01:intron 25.0%
!!! AGAATTTTGATCATTCCTTT+GGG + Chr1:95988651-95988670 None:intergenic 25.0%
!!! ATTTTGCTATCTGATTTTCA+AGG - Chr1:95985553-95985572 MsG0180005771.01.T01:intron 25.0%
!!! CCTGGTATTTTATTGATTTA+GGG - Chr1:95986390-95986409 MsG0180005771.01.T01:intron 25.0%
!!! GTTCTTTTAAGTTTCATACT+GGG - Chr1:95989676-95989695 MsG0180005771.01.T01:CDS 25.0%
!!! TAGAATTTTGATCATTCCTT+TGG + Chr1:95988652-95988671 None:intergenic 25.0%
!!! TTAAATAAGCAATTGGCTTT+TGG + Chr1:95989131-95989150 None:intergenic 25.0%
!!! TTGGCTTTACTTTTACTAAT+AGG + Chr1:95984368-95984387 None:intergenic 25.0%
!!! TTTATGATAGGTTTGTTAGT+TGG + Chr1:95986586-95986605 None:intergenic 25.0%
AAATTAGAACGAGAAAGCTT+CGG + Chr1:95989945-95989964 None:intergenic 30.0%
AACAACAACAACAACAACAA+TGG - Chr1:95984008-95984027 MsG0180005771.01.T01:three_prime_UTR 30.0%
AACATGATTAATTACCTGCA+TGG + Chr1:95989919-95989938 None:intergenic 30.0%
AACTGTAATATTCAGACACA+TGG + Chr1:95990266-95990285 None:intergenic 30.0%
AAGACACTTAAGCCAAATAT+AGG + Chr1:95986014-95986033 None:intergenic 30.0%
AAGGTAGACAAATTTCTTCT+AGG - Chr1:95984054-95984073 MsG0180005771.01.T01:three_prime_UTR 30.0%
AAGTTAGTTAGTTAGCTAGT+AGG + Chr1:95986253-95986272 None:intergenic 30.0%
AATATATTGTAGAGCTTCGA+GGG - Chr1:95986433-95986452 MsG0180005771.01.T01:intron 30.0%
ACAGGATTTCTAATGTTGTT+TGG + Chr1:95985488-95985507 None:intergenic 30.0%
ACAGGTCTTAAATAAGCAAT+TGG + Chr1:95989138-95989157 None:intergenic 30.0%
ACTAATTTGAGCTTATCTAC+TGG - Chr1:95989166-95989185 MsG0180005771.01.T01:CDS 30.0%
ACTACCAGAATTACTATTGA+TGG + Chr1:95985086-95985105 None:intergenic 30.0%
ACTGTAATATTCAGACACAT+GGG + Chr1:95990265-95990284 None:intergenic 30.0%
AGATTTCGTATTTGGAAGAA+TGG - Chr1:95987339-95987358 MsG0180005771.01.T01:intron 30.0%
ATAAGCCAATTGAATGGAAA+TGG - Chr1:95986350-95986369 MsG0180005771.01.T01:intron 30.0%
ATAGTATATGGTCATAGCAT+GGG - Chr1:95988370-95988389 MsG0180005771.01.T01:intron 30.0%
ATATCCTAACAGAAACAAGT+AGG - Chr1:95986319-95986338 MsG0180005771.01.T01:intron 30.0%
ATTCAATTTCTGCACCATAA+AGG + Chr1:95985248-95985267 None:intergenic 30.0%
ATTGCAACAATCAATGGTTA+TGG - Chr1:95984568-95984587 MsG0180005771.01.T01:intron 30.0%
ATTTCAAGCATGTGTTACAA+AGG - Chr1:95987200-95987219 MsG0180005771.01.T01:CDS 30.0%
CATACTTAAAAGAATCAAGC+TGG - Chr1:95987104-95987123 MsG0180005771.01.T01:intron 30.0%
CCCTAAATCAATAAAATACC+AGG + Chr1:95986393-95986412 None:intergenic 30.0%
CCGATAATAATACTTACACA+TGG - Chr1:95986984-95987003 MsG0180005771.01.T01:intron 30.0%
GAAGTAATACATTCCTTGAT+TGG - Chr1:95987729-95987748 MsG0180005771.01.T01:intron 30.0%
GATTTCGTATTTGGAAGAAT+GGG - Chr1:95987340-95987359 MsG0180005771.01.T01:intron 30.0%
GTAACACATGCTTGAAATAT+TGG + Chr1:95987198-95987217 None:intergenic 30.0%
GTCATAATTGGAAATGCATT+TGG - Chr1:95987247-95987266 MsG0180005771.01.T01:intron 30.0%
TAAAGGTAACATCAAAGGAA+AGG - Chr1:95989850-95989869 MsG0180005771.01.T01:CDS 30.0%
TAAGTGTCTTAGAAACTGTT+AGG - Chr1:95986024-95986043 MsG0180005771.01.T01:intron 30.0%
TAGAAGGATACATAGATAGA+GGG + Chr1:95986204-95986223 None:intergenic 30.0%
TATGAAAATGATGCAGATCA+AGG + Chr1:95983863-95983882 None:intergenic 30.0%
TCAAATTAGTCAATCCAAAC+AGG + Chr1:95989410-95989429 None:intergenic 30.0%
TCATAAACCTTCTATCTATG+CGG - Chr1:95986599-95986618 MsG0180005771.01.T01:intron 30.0%
TCTGTCATAGATTTCGTATT+TGG - Chr1:95987331-95987350 MsG0180005771.01.T01:intron 30.0%
TGACGAAAGAGAATATATTG+AGG + Chr1:95987603-95987622 None:intergenic 30.0%
TGTTGTATAATGCAGCAAAA+TGG + Chr1:95988957-95988976 None:intergenic 30.0%
TTAAAAAACAAGAACAAGGG+TGG + Chr1:95988542-95988561 None:intergenic 30.0%
TTAAGCCAAATATAGGACAA+CGG + Chr1:95986007-95986026 None:intergenic 30.0%
TTACAATACTTTATAGGCTG+TGG - Chr1:95986815-95986834 MsG0180005771.01.T01:intron 30.0%
TTGATGTCATATAAACCAAG+TGG - Chr1:95988060-95988079 MsG0180005771.01.T01:intron 30.0%
TTTATATGACATCAAGACAG+TGG + Chr1:95988055-95988074 None:intergenic 30.0%
TTTCCTTTGATGTTACCTTT+AGG + Chr1:95989851-95989870 None:intergenic 30.0%
! AAGTTTTCACCTTTTTGCAA+TGG - Chr1:95983938-95983957 MsG0180005771.01.T01:three_prime_UTR 30.0%
! AATTTGTCTACCTTTTCTTC+TGG + Chr1:95984048-95984067 None:intergenic 30.0%
! ACAGTATGTACTGCAATTTT+TGG - Chr1:95987455-95987474 MsG0180005771.01.T01:intron 30.0%
! ACTGTTTTCACAAGTTATGT+TGG + Chr1:95989535-95989554 None:intergenic 30.0%
! AGAAGAAGAGATTCTTTTGA+TGG - Chr1:95984599-95984618 MsG0180005771.01.T01:intron 30.0%
! ATTTGTCTACCTTTTCTTCT+GGG + Chr1:95984047-95984066 None:intergenic 30.0%
! GTCAAAGGTGAGTTTTTATA+AGG - Chr1:95987619-95987638 MsG0180005771.01.T01:intron 30.0%
! TAAGTATTTGATGTGTTGCT+AGG - Chr1:95988559-95988578 MsG0180005771.01.T01:intron 30.0%
! TCAAATTAGTCGATTCAAAC+AGG + Chr1:95989156-95989175 None:intergenic 30.0%
! TTTATTGTTTTCACCTTCTG+TGG - Chr1:95988843-95988862 MsG0180005771.01.T01:intron 30.0%
!! AAATCCTACTTGTTTCTGTT+AGG + Chr1:95986326-95986345 None:intergenic 30.0%
!! AGTTTGTCTGTTTCTTTTCA+AGG - Chr1:95984326-95984345 MsG0180005771.01.T01:intron 30.0%
!! ATAGTGAGAAAATGTTTTGG+TGG + Chr1:95988981-95989000 None:intergenic 30.0%
!! CTTAGCTTTGTCATAGTATA+TGG - Chr1:95988358-95988377 MsG0180005771.01.T01:intron 30.0%
!! TTCCATCTCTTTTAAGTGTT+TGG - Chr1:95985685-95985704 MsG0180005771.01.T01:intron 30.0%
!! TTTTAACAACTCAGCTTGTT+AGG - Chr1:95988902-95988921 MsG0180005771.01.T01:intron 30.0%
!!! AGAGATTCTTTTGATGGATT+AGG - Chr1:95984605-95984624 MsG0180005771.01.T01:intron 30.0%
!!! CGTTCTTTTAAGTTTCATAC+TGG - Chr1:95989675-95989694 MsG0180005771.01.T01:CDS 30.0%
!!! CTTTAGTTTTGAAGCTATGA+AGG - Chr1:95983900-95983919 MsG0180005771.01.T01:three_prime_UTR 30.0%
!!! CTTTTGAAATGATTGATGTG+TGG - Chr1:95988720-95988739 MsG0180005771.01.T01:intron 30.0%
!!! TTGTTGTTTCTTCCAAGTTT+TGG - Chr1:95984792-95984811 MsG0180005771.01.T01:intron 30.0%
AAAAATATTGTGGCAGGTCA+AGG - Chr1:95989988-95990007 MsG0180005771.01.T01:CDS 35.0%
AAAACCCATTAACCTCTTCA+AGG - Chr1:95983976-95983995 MsG0180005771.01.T01:three_prime_UTR 35.0%
AAATCCTGTGCTAGAAGTTT+AGG - Chr1:95985499-95985518 MsG0180005771.01.T01:intron 35.0%
AACAATGGCTTCTCCTATAA+GGG - Chr1:95984955-95984974 MsG0180005771.01.T01:intron 35.0%
AACCATTTGTGAGACTGTTT+GGG - Chr1:95989446-95989465 MsG0180005771.01.T01:CDS 35.0%
AACTCTTCCAGAATTAAGCA+AGG + Chr1:95989088-95989107 None:intergenic 35.0%
AAGCTCACTTCCATTCTAAA+GGG - Chr1:95987147-95987166 MsG0180005771.01.T01:CDS 35.0%
AAGGGTAATGAAATGGGTAA+TGG + Chr1:95987880-95987899 None:intergenic 35.0%
AATTAAGCAAGGGTTCCTAT+GGG + Chr1:95989077-95989096 None:intergenic 35.0%
ACACGAATAATCACTTGTCA+AGG - Chr1:95984504-95984523 MsG0180005771.01.T01:intron 35.0%
ACCAGAACAGACATCATATA+AGG + Chr1:95985867-95985886 None:intergenic 35.0%
ACCTTATATGATGTCTGTTC+TGG - Chr1:95985863-95985882 MsG0180005771.01.T01:intron 35.0%
ACTCTTCCAGAATTAAGCAA+GGG + Chr1:95989087-95989106 None:intergenic 35.0%
AGAAATTGAATGCAGAGGTA+TGG - Chr1:95985257-95985276 MsG0180005771.01.T01:intron 35.0%
AGATCAAGGAGATGGAAAAT+GGG + Chr1:95983849-95983868 None:intergenic 35.0%
AGCACCATCAATAGTAATTC+TGG - Chr1:95985079-95985098 MsG0180005771.01.T01:intron 35.0%
AGCTTCTAGTAACTTCTACT+AGG - Chr1:95984303-95984322 MsG0180005771.01.T01:intron 35.0%
AGGGTAATGAAATGGGTAAT+GGG + Chr1:95987879-95987898 None:intergenic 35.0%
AGTACATTATTCTGTGACAC+AGG + Chr1:95986927-95986946 None:intergenic 35.0%
AGTGATTGCATTGTAAAACC+TGG - Chr1:95988681-95988700 MsG0180005771.01.T01:intron 35.0%
ATCAAAGTAGTTGCTGGAAA+AGG - Chr1:95986690-95986709 MsG0180005771.01.T01:CDS 35.0%
ATCAATGGTGTATTATGCTC+TGG - Chr1:95990463-95990482 MsG0180005771.01.T01:five_prime_UTR 35.0%
ATCCAGAATTAAGCACTATG+GGG + Chr1:95989337-95989356 None:intergenic 35.0%
ATCCTTCAAATTTGGCACAT+CGG + Chr1:95987540-95987559 None:intergenic 35.0%
CAAATTTGAAGGATGCTTTG+GGG - Chr1:95987546-95987565 MsG0180005771.01.T01:intron 35.0%
CAATATATTGTAGAGCTTCG+AGG - Chr1:95986432-95986451 MsG0180005771.01.T01:intron 35.0%
CAGAAAATCAAAGTAGTTGC+TGG - Chr1:95986684-95986703 MsG0180005771.01.T01:intron 35.0%
CATAGTATATGGTCATAGCA+TGG - Chr1:95988369-95988388 MsG0180005771.01.T01:intron 35.0%
CATCCAGAATTAAGCACTAT+GGG + Chr1:95989338-95989357 None:intergenic 35.0%
CCAAATTTGAAGGATGCTTT+GGG - Chr1:95987545-95987564 MsG0180005771.01.T01:intron 35.0%
CCTTGAGGCTTCTTTATAAT+CGG - Chr1:95985182-95985201 MsG0180005771.01.T01:intron 35.0%
CTCCAAACACTTAAAAGAGA+TGG + Chr1:95985690-95985709 None:intergenic 35.0%
GATCCTAAAGGTAACATCAA+AGG - Chr1:95989845-95989864 MsG0180005771.01.T01:CDS 35.0%
GGAGTGATCTCTATCTAAAA+GGG + Chr1:95987366-95987385 None:intergenic 35.0%
GGATCAAAAGCTCATAATGA+TGG - Chr1:95988017-95988036 MsG0180005771.01.T01:intron 35.0%
GTAGAAGGATACATAGATAG+AGG + Chr1:95986205-95986224 None:intergenic 35.0%
GTAGTTGTAGTAGAAGATGA+AGG + Chr1:95984095-95984114 None:intergenic 35.0%
GTTTCATCTGGTAGTAATTC+AGG - Chr1:95984713-95984732 MsG0180005771.01.T01:intron 35.0%
TAACATGTTGACAATGAGTC+AGG - Chr1:95986760-95986779 MsG0180005771.01.T01:intron 35.0%
TAACCATTTGTGAGACTGTT+TGG - Chr1:95989445-95989464 MsG0180005771.01.T01:CDS 35.0%
TACCAAGTTTGATCCTTGAT+TGG - Chr1:95988133-95988152 MsG0180005771.01.T01:intron 35.0%
TAGCATGGGCACATTAAAAT+TGG - Chr1:95988384-95988403 MsG0180005771.01.T01:intron 35.0%
TCACCAAGAAACTATCTTGT+TGG - Chr1:95985915-95985934 MsG0180005771.01.T01:intron 35.0%
TCATCCAGAATTAAGCACTA+TGG + Chr1:95989339-95989358 None:intergenic 35.0%
TGCATCCATTTCCATTCAAT+TGG + Chr1:95986358-95986377 None:intergenic 35.0%
TGGAGTGATCTCTATCTAAA+AGG + Chr1:95987367-95987386 None:intergenic 35.0%
TGTCATATAAACCAAGTGGT+TGG - Chr1:95988064-95988083 MsG0180005771.01.T01:intron 35.0%
TGTGCATATACTCAAGTATC+TGG + Chr1:95986666-95986685 None:intergenic 35.0%
TTAAATCGGGACAACTTTGA+TGG + Chr1:95986789-95986808 None:intergenic 35.0%
TTATCCTCGTCTTTCTCATA+GGG - Chr1:95988411-95988430 MsG0180005771.01.T01:intron 35.0%
TTCCAATCAAGGATCAAACT+TGG + Chr1:95988138-95988157 None:intergenic 35.0%
TTGGGAGAGCTTATGAAAAT+AGG - Chr1:95989210-95989229 MsG0180005771.01.T01:CDS 35.0%
TTGTTGGCAGTGATCTAATT+AGG - Chr1:95985931-95985950 MsG0180005771.01.T01:intron 35.0%
TTGTTTGGCATTAAATCCCT+GGG + Chr1:95985473-95985492 None:intergenic 35.0%
TTTATAATCGGTATGTGCAG+TGG - Chr1:95985194-95985213 MsG0180005771.01.T01:intron 35.0%
TTTGTTGAACGTGACAAAAG+TGG + Chr1:95984185-95984204 None:intergenic 35.0%
! ACTGTTTTCATAAGCTATGC+TGG + Chr1:95989282-95989301 None:intergenic 35.0%
! AGATAGTTTCTTGGTGACAT+TGG + Chr1:95985912-95985931 None:intergenic 35.0%
! ATTAGTTTCCTGCCAAAACT+TGG + Chr1:95984807-95984826 None:intergenic 35.0%
! CACAATTACCTTGTCATTTG+AGG - Chr1:95990353-95990372 MsG0180005771.01.T01:exon 35.0%
! GATACTGATAGTGTTTCATC+TGG - Chr1:95984701-95984720 MsG0180005771.01.T01:intron 35.0%
! GTGAGTTTTTATAAGGTGCA+TGG - Chr1:95987626-95987645 MsG0180005771.01.T01:intron 35.0%
! GTGGTTTGAGTTTGGATTTA+GGG - Chr1:95984627-95984646 MsG0180005771.01.T01:intron 35.0%
! GTTGTTGTTGTTGTTGATGT+CGG + Chr1:95984003-95984022 None:intergenic 35.0%
! GTTTTTGCTTCAACAATGCA+AGG - Chr1:95989872-95989891 MsG0180005771.01.T01:CDS 35.0%
! TAATTTGGAGTTTGACATGG+AGG + Chr1:95988183-95988202 None:intergenic 35.0%
! TACAATGTTTAGGATGACAG+TGG - Chr1:95986949-95986968 MsG0180005771.01.T01:CDS 35.0%
! TCGTAATTTGGAGTTTGACA+TGG + Chr1:95988186-95988205 None:intergenic 35.0%
! TCGTGATTTGAGATAGTGTT+GGG + Chr1:95986491-95986510 None:intergenic 35.0%
! TTGTGGAATGGTTTAGGTTA+GGG - Chr1:95985409-95985428 MsG0180005771.01.T01:intron 35.0%
! TTTGTGGAATGGTTTAGGTT+AGG - Chr1:95985408-95985427 MsG0180005771.01.T01:intron 35.0%
! TTTTCACCTTTTTGCAATGG+TGG - Chr1:95983941-95983960 MsG0180005771.01.T01:three_prime_UTR 35.0%
!! ACATAACCATCTAGTTCTTG+GGG + Chr1:95988220-95988239 None:intergenic 35.0%
!! GACATAACCATCTAGTTCTT+GGG + Chr1:95988221-95988240 None:intergenic 35.0%
!! TGACATAACCATCTAGTTCT+TGG + Chr1:95988222-95988241 None:intergenic 35.0%
!! TGATAGGTTTGTTAGTTGGA+AGG + Chr1:95986582-95986601 None:intergenic 35.0%
!!! AAATTGCTATTTTCTGCCCA+GGG - Chr1:95985454-95985473 MsG0180005771.01.T01:intron 35.0%
!!! AATAGCTGGTTTTTGTTTGC+TGG - Chr1:95990194-95990213 MsG0180005771.01.T01:CDS 35.0%
!!! ACTGTTGCTTTTTCAACAAG+CGG + Chr1:95987440-95987459 None:intergenic 35.0%
!!! GATTCTTTTGATGGATTAGG+TGG - Chr1:95984608-95984627 MsG0180005771.01.T01:intron 35.0%
!!! GGTTAATGGGTTTTCAGAAA+TGG + Chr1:95983970-95983989 None:intergenic 35.0%
!!! GTTTTTTATAGCGTGCTTTG+TGG - Chr1:95985392-95985411 MsG0180005771.01.T01:intron 35.0%
AAGACATTCAAGACCACACT+AGG + Chr1:95990229-95990248 None:intergenic 40.0%
AAGCAATGCACAATTACTGG+CGG + Chr1:95985371-95985390 None:intergenic 40.0%
AAGCACTTGTGAGACTGTTT+GGG - Chr1:95989192-95989211 MsG0180005771.01.T01:CDS 40.0%
AAGGAGATGGAAAATGGGTA+TGG + Chr1:95983844-95983863 None:intergenic 40.0%
AATGATGCAGATCAAGGAGA+TGG + Chr1:95983857-95983876 None:intergenic 40.0%
ACAATGGCTTCTCCTATAAG+GGG - Chr1:95984956-95984975 MsG0180005771.01.T01:intron 40.0%
ACGAAGCAATGCACAATTAC+TGG + Chr1:95985374-95985393 None:intergenic 40.0%
ACGTGCATTGCAACAATCAA+TGG - Chr1:95984562-95984581 MsG0180005771.01.T01:intron 40.0%
ACTAGAAGCTTAGTTGCTTC+AGG + Chr1:95984293-95984312 None:intergenic 40.0%
ACTAGGAAGACACTTTGCAA+CGG + Chr1:95985729-95985748 None:intergenic 40.0%
ACTTTGTCCGCATAGATAGA+AGG + Chr1:95986609-95986628 None:intergenic 40.0%
AGAAACTAACTGCTTGGTAG+CGG - Chr1:95989821-95989840 MsG0180005771.01.T01:CDS 40.0%
AGAATTAAGCACTATGGGGA+GGG + Chr1:95989333-95989352 None:intergenic 40.0%
ATAGGAGAAGCCATTGTTCT+CGG + Chr1:95984953-95984972 None:intergenic 40.0%
ATTAAGCAAGGGTTCCTATG+GGG + Chr1:95989076-95989095 None:intergenic 40.0%
CAATCAATGGTTATGGAGAG+TGG - Chr1:95984575-95984594 MsG0180005771.01.T01:intron 40.0%
CAGATCAAGGAGATGGAAAA+TGG + Chr1:95983850-95983869 None:intergenic 40.0%
CATAGGGTTAAGCAACACTT+GGG - Chr1:95988427-95988446 MsG0180005771.01.T01:intron 40.0%
CCGATTATAAAGAAGCCTCA+AGG + Chr1:95985185-95985204 None:intergenic 40.0%
CTGCCAACAAGATAGTTTCT+TGG + Chr1:95985921-95985940 None:intergenic 40.0%
CTTATCCTCGTCTTTCTCAT+AGG - Chr1:95988410-95988429 MsG0180005771.01.T01:intron 40.0%
GAAAACCATTCGTTTGTAGC+AGG - Chr1:95989794-95989813 MsG0180005771.01.T01:CDS 40.0%
GAACAATGGCTTCTCCTATA+AGG - Chr1:95984954-95984973 MsG0180005771.01.T01:intron 40.0%
GAAGCTCACTTCCATTCTAA+AGG - Chr1:95987146-95987165 MsG0180005771.01.T01:CDS 40.0%
GAAGTTTAGGCTGTAAGCTA+AGG - Chr1:95985512-95985531 MsG0180005771.01.T01:intron 40.0%
GAATTAAGCAAGGGTTCCTA+TGG + Chr1:95989078-95989097 None:intergenic 40.0%
GAGAGTAGTGTGTTAGCATT+AGG + Chr1:95990117-95990136 None:intergenic 40.0%
GCCAAATTTGAAGGATGCTT+TGG - Chr1:95987544-95987563 MsG0180005771.01.T01:intron 40.0%
GCTATGAAGGTAACAATGTG+AGG - Chr1:95983913-95983932 MsG0180005771.01.T01:three_prime_UTR 40.0%
GGTGGTGACTCTATTGTTAA+GGG + Chr1:95986143-95986162 None:intergenic 40.0%
GTAGTAGAAGATGAAGGTGA+AGG + Chr1:95984089-95984108 None:intergenic 40.0%
GTGGTGACTCTATTGTTAAG+GGG + Chr1:95986142-95986161 None:intergenic 40.0%
GTTGAAGACAACATTCCTCA+AGG - Chr1:95989105-95989124 MsG0180005771.01.T01:CDS 40.0%
GTTGTTTGGCATTAAATCCC+TGG + Chr1:95985474-95985493 None:intergenic 40.0%
TAAGCACTTGTGAGACTGTT+TGG - Chr1:95989191-95989210 MsG0180005771.01.T01:CDS 40.0%
TAATCACTTGTCAAGGAGTG+TGG - Chr1:95984511-95984530 MsG0180005771.01.T01:intron 40.0%
TAGGAACCCTTGCTTAATTC+TGG - Chr1:95989078-95989097 MsG0180005771.01.T01:CDS 40.0%
TATTGTGCCAGACACATTTG+TGG - Chr1:95987043-95987062 MsG0180005771.01.T01:intron 40.0%
TATTGTTAAGGGGAAACCCT+TGG + Chr1:95986132-95986151 None:intergenic 40.0%
TATTTGATGCGCATACCTTG+AGG - Chr1:95985167-95985186 MsG0180005771.01.T01:intron 40.0%
TCAGAGCTCAAAAGCAAATG+AGG + Chr1:95988602-95988621 None:intergenic 40.0%
TCATAGGGTTAAGCAACACT+TGG - Chr1:95988426-95988445 MsG0180005771.01.T01:intron 40.0%
TCATCTGGTAGTAATTCAGG+AGG - Chr1:95984716-95984735 MsG0180005771.01.T01:intron 40.0%
TCCACAGATTGAGAACGTTT+AGG + Chr1:95984236-95984255 None:intergenic 40.0%
TCCTAAACGTTCTCAATCTG+TGG - Chr1:95984232-95984251 MsG0180005771.01.T01:exon 40.0%
TCCTTGATTGGAACAATCCT+TGG - Chr1:95988145-95988164 MsG0180005771.01.T01:intron 40.0%
TGAAATGGAGAGTCAATAGC+TGG - Chr1:95990180-95990199 MsG0180005771.01.T01:CDS 40.0%
TGACAAAGCTAAGCACGTAT+AGG + Chr1:95988351-95988370 None:intergenic 40.0%
TGCTTCGCCTAGTAAACTTT+GGG - Chr1:95984991-95985010 MsG0180005771.01.T01:intron 40.0%
TGGACTTCTGCTCAAAACTT+GGG - Chr1:95987695-95987714 MsG0180005771.01.T01:intron 40.0%
TGTACGTTCGTATGCCAAAA+GGG - Chr1:95986458-95986477 MsG0180005771.01.T01:intron 40.0%
TGTCAATTCACACTACCCAA+AGG - Chr1:95988633-95988652 MsG0180005771.01.T01:intron 40.0%
TTAACCCTATGAGAAAGACG+AGG + Chr1:95988418-95988437 None:intergenic 40.0%
TTATAGCGTGCTTTGTGGAA+TGG - Chr1:95985397-95985416 MsG0180005771.01.T01:intron 40.0%
TTCCTAGTTCCAGATAATGC+AGG - Chr1:95985741-95985760 MsG0180005771.01.T01:intron 40.0%
TTTGAAAAGGTGACCACAGA+AGG + Chr1:95988859-95988878 None:intergenic 40.0%
TTTGGCAGGAAACTAATAGC+CGG - Chr1:95984810-95984829 MsG0180005771.01.T01:intron 40.0%
! AGTTGATGTGATGCAAGCAA+TGG - Chr1:95987574-95987593 MsG0180005771.01.T01:intron 40.0%
! CAGCTTTTCCTCAAATGACA+AGG + Chr1:95990364-95990383 None:intergenic 40.0%
! CCCAAAGCATCCTTCAAATT+TGG + Chr1:95987548-95987567 None:intergenic 40.0%
! CGTGATTTGAGATAGTGTTG+GGG + Chr1:95986490-95986509 None:intergenic 40.0%
! CTCGTGATTTGAGATAGTGT+TGG + Chr1:95986492-95986511 None:intergenic 40.0%
! GAGATAAGGAATGTGTTGAC+TGG - Chr1:95986640-95986659 MsG0180005771.01.T01:intron 40.0%
! GGTGGTTTGAGTTTGGATTT+AGG - Chr1:95984626-95984645 MsG0180005771.01.T01:intron 40.0%
! TCATACCTGTCCCTTTAGAA+TGG + Chr1:95987160-95987179 None:intergenic 40.0%
! TGGATTAGGTGGTTTGAGTT+TGG - Chr1:95984619-95984638 MsG0180005771.01.T01:intron 40.0%
! TGGTGGTGACTCTATTGTTA+AGG + Chr1:95986144-95986163 None:intergenic 40.0%
! TGTGGAATGGTTTAGGTTAG+GGG - Chr1:95985410-95985429 MsG0180005771.01.T01:intron 40.0%
! TTGTCAAGGAGTGTGGATTA+TGG - Chr1:95984518-95984537 MsG0180005771.01.T01:intron 40.0%
! TTGTGCCGTTGTCCTATATT+TGG - Chr1:95985999-95986018 MsG0180005771.01.T01:intron 40.0%
!! AACAACTCAGCTTGTTAGGT+GGG - Chr1:95988906-95988925 MsG0180005771.01.T01:intron 40.0%
!! CATAACCATCTAGTTCTTGG+GGG + Chr1:95988219-95988238 None:intergenic 40.0%
!! CGTGTTTGTTGTTAAGAAGC+TGG + Chr1:95990055-95990074 None:intergenic 40.0%
!! GTCTGTTTCTTTTCAAGGTG+AGG - Chr1:95984331-95984350 MsG0180005771.01.T01:intron 40.0%
!! TAACAACTCAGCTTGTTAGG+TGG - Chr1:95988905-95988924 MsG0180005771.01.T01:intron 40.0%
!! TGTTTCTTCCAAGTTTTGGC+AGG - Chr1:95984796-95984815 MsG0180005771.01.T01:intron 40.0%
!! TTCTTCTCTTGGTGCTCTTA+AGG - Chr1:95984748-95984767 MsG0180005771.01.T01:intron 40.0%
!!! CAAATTGCTATTTTCTGCCC+AGG - Chr1:95985453-95985472 MsG0180005771.01.T01:intron 40.0%
!!! CTTTTTCAACAAGCGGAAGA+CGG + Chr1:95987433-95987452 None:intergenic 40.0%
AAACTAATAGCCGGTTGCGA+CGG - Chr1:95984819-95984838 MsG0180005771.01.T01:intron 45.0%
AACCATTCGTTTGTAGCAGG+TGG - Chr1:95989797-95989816 MsG0180005771.01.T01:CDS 45.0%
AATGCAGGCTCATCAGTAGA+TGG - Chr1:95985756-95985775 MsG0180005771.01.T01:intron 45.0%
AATTACCTGCATGGCTGCTA+AGG + Chr1:95989910-95989929 None:intergenic 45.0%
ACAATACCACGATTCTCCCT+CGG + Chr1:95984776-95984795 None:intergenic 45.0%
ACAGCCTAAACTTCTAGCAC+AGG + Chr1:95985506-95985525 None:intergenic 45.0%
ACTCCTTCTGTTGCTGGAAA+AGG - Chr1:95984416-95984435 MsG0180005771.01.T01:CDS 45.0%
ACTGATGAGCCTGCATTATC+TGG + Chr1:95985753-95985772 None:intergenic 45.0%
AGACACATTTGTGGAACGCA+TGG - Chr1:95987052-95987071 MsG0180005771.01.T01:intron 45.0%
AGCTTAGTTGCTTCAGGAAC+TGG + Chr1:95984287-95984306 None:intergenic 45.0%
AGTTGCTCCAAGTACAGAAC+TGG + Chr1:95987387-95987406 None:intergenic 45.0%
ATAATCGGTATGTGCAGTGG+CGG - Chr1:95985197-95985216 MsG0180005771.01.T01:intron 45.0%
ATCACGAGTCAATGCAGTCT+CGG - Chr1:95986504-95986523 MsG0180005771.01.T01:intron 45.0%
ATGCGTTCCACAAATGTGTC+TGG + Chr1:95987053-95987072 None:intergenic 45.0%
ATGTGAGGAGAGGGAAGATA+GGG - Chr1:95985134-95985153 MsG0180005771.01.T01:intron 45.0%
ATTGTTCTCGGCGACATCAT+AGG + Chr1:95984941-95984960 None:intergenic 45.0%
CAAAGTTTACTAGGCGAAGC+AGG + Chr1:95984992-95985011 None:intergenic 45.0%
CAATGGCTTCTCCTATAAGG+GGG - Chr1:95984957-95984976 MsG0180005771.01.T01:intron 45.0%
CAGAATTAAGCACTATGGGG+AGG + Chr1:95989334-95989353 None:intergenic 45.0%
CCACACATACAACCATGTGT+GGG + Chr1:95988789-95988808 None:intergenic 45.0%
CCACACATGGTTGTATGTGT+GGG - Chr1:95988787-95988806 MsG0180005771.01.T01:intron 45.0%
CGGACCTTGAAGAGGTTAAT+GGG + Chr1:95983983-95984002 None:intergenic 45.0%
CGTGCTTTGTGGAATGGTTT+AGG - Chr1:95985403-95985422 MsG0180005771.01.T01:intron 45.0%
CTAGTTGACAAAGGTGAACC+AGG + Chr1:95984854-95984873 None:intergenic 45.0%
CTCCCAAACAGTCTCACAAA+TGG + Chr1:95989451-95989470 None:intergenic 45.0%
CTCCCCATAGTGCTTAATTC+TGG - Chr1:95989332-95989351 MsG0180005771.01.T01:CDS 45.0%
CTGCTTCGCCTAGTAAACTT+TGG - Chr1:95984990-95985009 MsG0180005771.01.T01:intron 45.0%
CTGGACTTCTGCTCAAAACT+TGG - Chr1:95987694-95987713 MsG0180005771.01.T01:intron 45.0%
CTGTACGTTCGTATGCCAAA+AGG - Chr1:95986457-95986476 MsG0180005771.01.T01:intron 45.0%
CTTAGTTGCTTCAGGAACTG+GGG + Chr1:95984285-95984304 None:intergenic 45.0%
GAACGTTTAGGAACAGCAAC+TGG + Chr1:95984224-95984243 None:intergenic 45.0%
GAATCAAGCTGGTATTGCTG+AGG - Chr1:95987115-95987134 MsG0180005771.01.T01:intron 45.0%
GACACATTTGTGGAACGCAT+GGG - Chr1:95987053-95987072 MsG0180005771.01.T01:intron 45.0%
GAGCTCAAAAGCAAATGAGG+TGG + Chr1:95988599-95988618 None:intergenic 45.0%
GATCACTCCAGTTCTGTACT+TGG - Chr1:95987377-95987396 MsG0180005771.01.T01:intron 45.0%
GATGCACAATTTCCCACACA+TGG - Chr1:95988774-95988793 MsG0180005771.01.T01:intron 45.0%
GATTGGAACAATCCTTGGCT+AGG - Chr1:95988150-95988169 MsG0180005771.01.T01:intron 45.0%
GCAGAGAAGCTAAGAATCGA+AGG + Chr1:95985112-95985131 None:intergenic 45.0%
GCCAAGGATTGTTCCAATCA+AGG + Chr1:95988149-95988168 None:intergenic 45.0%
GCCTAGTAAACTTTGGGCAT+CGG - Chr1:95984997-95985016 MsG0180005771.01.T01:intron 45.0%
GCTTAGTTGCTTCAGGAACT+GGG + Chr1:95984286-95984305 None:intergenic 45.0%
GGAAATGGATGCAAGCTGAT+AGG - Chr1:95986365-95986384 MsG0180005771.01.T01:intron 45.0%
GGAGGACATGATTCTTCTCT+TGG - Chr1:95984737-95984756 MsG0180005771.01.T01:intron 45.0%
GGGTAACAATCTCAGAGCTT+CGG - Chr1:95987073-95987092 MsG0180005771.01.T01:intron 45.0%
GGTGCAGAAATTGAATGCAG+AGG - Chr1:95985252-95985271 MsG0180005771.01.T01:intron 45.0%
GGTGGAAGAAACTAACTGCT+TGG - Chr1:95989815-95989834 MsG0180005771.01.T01:CDS 45.0%
GGTGTCTTACCCAGAAGAAA+AGG - Chr1:95984035-95984054 MsG0180005771.01.T01:three_prime_UTR 45.0%
GGTTCATGCATAGAGAGAGA+GGG - Chr1:95989712-95989731 MsG0180005771.01.T01:CDS 45.0%
GTAAACTCCTGCGAATAGAG+TGG + Chr1:95986167-95986186 None:intergenic 45.0%
GTTCATGCATAGAGAGAGAG+GGG - Chr1:95989713-95989732 MsG0180005771.01.T01:CDS 45.0%
GTTGCTGGAAAAGGAGATCA+GGG - Chr1:95984425-95984444 MsG0180005771.01.T01:CDS 45.0%
TAGGGCTGATGCTACCTTTA+TGG - Chr1:95985231-95985250 MsG0180005771.01.T01:intron 45.0%
TATAGGCTGTGGAGTTCTAC+TGG - Chr1:95986826-95986845 MsG0180005771.01.T01:intron 45.0%
TATGATGTCGCCGAGAACAA+TGG - Chr1:95984940-95984959 MsG0180005771.01.T01:intron 45.0%
TCGGACCTTGAAGAGGTTAA+TGG + Chr1:95983984-95984003 None:intergenic 45.0%
TCTGGTAGTAATTCAGGAGG+AGG - Chr1:95984719-95984738 MsG0180005771.01.T01:intron 45.0%
TGCATGAACCATTCCATGAG+TGG + Chr1:95989702-95989721 None:intergenic 45.0%
TGCTTGCATCACATCAACTG+CGG + Chr1:95987573-95987592 None:intergenic 45.0%
TGGTTCATGCATAGAGAGAG+AGG - Chr1:95989711-95989730 MsG0180005771.01.T01:CDS 45.0%
TGTCAACTAGTCCTGCTTCA+AGG - Chr1:95984864-95984883 MsG0180005771.01.T01:intron 45.0%
TGTTGCTGGAAAAGGAGATC+AGG - Chr1:95984424-95984443 MsG0180005771.01.T01:CDS 45.0%
TTAGCTTCTCTGCTGATGTG+AGG - Chr1:95985119-95985138 MsG0180005771.01.T01:intron 45.0%
TTCCACCTGCTACAAACGAA+TGG + Chr1:95989802-95989821 None:intergenic 45.0%
TTCGTATGCCAAAAGGGCAA+AGG - Chr1:95986464-95986483 MsG0180005771.01.T01:intron 45.0%
TTGAACTATCCCCTGGATCT+GGG - Chr1:95988747-95988766 MsG0180005771.01.T01:intron 45.0%
TTGGAGCAACTGAAGCTTTG+AGG - Chr1:95987396-95987415 MsG0180005771.01.T01:intron 45.0%
TTGGTCTAGTAGGTCTCCTA+CGG + Chr1:95984259-95984278 None:intergenic 45.0%
! AGCCTGCATTATCTGGAACT+AGG + Chr1:95985746-95985765 None:intergenic 45.0%
! CACTTCCATTCTAAAGGGAC+AGG - Chr1:95987152-95987171 MsG0180005771.01.T01:CDS 45.0%
! GTGGAATGGTTTAGGTTAGG+GGG - Chr1:95985411-95985430 MsG0180005771.01.T01:intron 45.0%
! TCAAGGAGTGTGGATTATGG+TGG - Chr1:95984521-95984540 MsG0180005771.01.T01:intron 45.0%
! TCTCCTTTTCCAGCAACAGA+AGG + Chr1:95984422-95984441 None:intergenic 45.0%
! TGGAGCAACTGAAGCTTTGA+GGG - Chr1:95987397-95987416 MsG0180005771.01.T01:intron 45.0%
!! ACAACTCAGCTTGTTAGGTG+GGG - Chr1:95988907-95988926 MsG0180005771.01.T01:intron 45.0%
!! ATCTAGTTCTTGGGGGAAAG+GGG + Chr1:95988212-95988231 None:intergenic 45.0%
!! CATCTAGTTCTTGGGGGAAA+GGG + Chr1:95988213-95988232 None:intergenic 45.0%
!! CTGGTTTCTGAAACCTAGTG+TGG - Chr1:95990213-95990232 MsG0180005771.01.T01:CDS 45.0%
!! GAAGCAGGACTAGTTGACAA+AGG + Chr1:95984863-95984882 None:intergenic 45.0%
!! GGGGTTTTCTAGTCCTTCTA+AGG - Chr1:95985039-95985058 MsG0180005771.01.T01:intron 45.0%
!! TCCTTCTAAGGTGAGAAGTG+CGG - Chr1:95985051-95985070 MsG0180005771.01.T01:intron 45.0%
!! TTAGGTGGGGTCAGTTTTGA+TGG - Chr1:95988920-95988939 MsG0180005771.01.T01:intron 45.0%
!!! GCAATTGGATTTTGGCCTTG+AGG + Chr1:95989377-95989396 None:intergenic 45.0%
AACTCCTGCGAATAGAGTGG+TGG + Chr1:95986164-95986183 None:intergenic 50.0%
ACCGCACTTCTCACCTTAGA+AGG + Chr1:95985055-95985074 None:intergenic 50.0%
AGGCTGTAAGCTAAGGTCTC+AGG - Chr1:95985519-95985538 MsG0180005771.01.T01:intron 50.0%
AGGGTTACTCCTTCTGTTGC+TGG - Chr1:95984410-95984429 MsG0180005771.01.T01:CDS 50.0%
AGTGGCGGTTCGTTAATGCT+AGG - Chr1:95985212-95985231 MsG0180005771.01.T01:intron 50.0%
ATACTGGGCCACTCATGGAA+TGG - Chr1:95989691-95989710 MsG0180005771.01.T01:CDS 50.0%
ATCAACATCGATGGCCAGCA+CGG - Chr1:95984468-95984487 MsG0180005771.01.T01:CDS 50.0%
CAGATCCAGGGGATAGTTCA+AGG + Chr1:95988748-95988767 None:intergenic 50.0%
CATTAGGAGTGAGAGCTGTC+AGG + Chr1:95990101-95990120 None:intergenic 50.0%
CCCACACATACAACCATGTG+TGG + Chr1:95988790-95988809 None:intergenic 50.0%
CCCACACATGGTTGTATGTG+TGG - Chr1:95988786-95988805 MsG0180005771.01.T01:intron 50.0%
CCTTTCCCCCAAGAACTAGA+TGG - Chr1:95988211-95988230 MsG0180005771.01.T01:intron 50.0%
CTTGAACTATCCCCTGGATC+TGG - Chr1:95988746-95988765 MsG0180005771.01.T01:intron 50.0%
GAGAGAAGTCTCTCCTCCAA+GGG - Chr1:95986113-95986132 MsG0180005771.01.T01:intron 50.0%
GAGGGAAGATAGGGGAAGAT+CGG - Chr1:95985143-95985162 MsG0180005771.01.T01:intron 50.0%
GATCTTGTAACCGTCGCAAC+CGG + Chr1:95984832-95984851 None:intergenic 50.0%
GATGACAGTGGCAACACTGT+TGG - Chr1:95986961-95986980 MsG0180005771.01.T01:intron 50.0%
GATGCAAGCTGATAGGAACC+TGG - Chr1:95986372-95986391 MsG0180005771.01.T01:intron 50.0%
GATGTGAGGAGAGGGAAGAT+AGG - Chr1:95985133-95985152 MsG0180005771.01.T01:intron 50.0%
GCCGATGCCCAAAGTTTACT+AGG + Chr1:95985001-95985020 None:intergenic 50.0%
GGAAAGGGGGACTCGTAATT+TGG + Chr1:95988198-95988217 None:intergenic 50.0%
GGAACACTGATCCTTGAAGC+AGG + Chr1:95984878-95984897 None:intergenic 50.0%
GGACTAGAAAACCCCCTTGA+TGG + Chr1:95985034-95985053 None:intergenic 50.0%
GGCCGATGTGCCAAATTTGA+AGG - Chr1:95987535-95987554 MsG0180005771.01.T01:intron 50.0%
GGCTGTAAGCTAAGGTCTCA+GGG - Chr1:95985520-95985539 MsG0180005771.01.T01:intron 50.0%
GTGGCGGTTCGTTAATGCTA+GGG - Chr1:95985213-95985232 MsG0180005771.01.T01:intron 50.0%
GTTCTCAATCTGTGGACCGT+AGG - Chr1:95984240-95984259 MsG0180005771.01.T01:exon 50.0%
GTTGATGTCGGACCTTGAAG+AGG + Chr1:95983991-95984010 None:intergenic 50.0%
GTTTCATACTGGGCCACTCA+TGG - Chr1:95989686-95989705 MsG0180005771.01.T01:CDS 50.0%
TCTCTGCTGATGTGAGGAGA+GGG - Chr1:95985125-95985144 MsG0180005771.01.T01:intron 50.0%
TGCATCTTAGCCCAGATCCA+GGG + Chr1:95988760-95988779 None:intergenic 50.0%
TGGCAGCCACCATTGCAAAA+AGG + Chr1:95983950-95983969 None:intergenic 50.0%
TGGTGCTCTTAAGGTTCCGA+GGG - Chr1:95984757-95984776 MsG0180005771.01.T01:intron 50.0%
TGGTTCCTTGAACTATCCCC+TGG - Chr1:95988740-95988759 MsG0180005771.01.T01:intron 50.0%
TGTGAGGAGAGGGAAGATAG+GGG - Chr1:95985135-95985154 MsG0180005771.01.T01:intron 50.0%
TGTTAAGGGGAAACCCTTGG+AGG + Chr1:95986129-95986148 None:intergenic 50.0%
TTCTCTGCTGATGTGAGGAG+AGG - Chr1:95985124-95985143 MsG0180005771.01.T01:intron 50.0%
TTGCGACGGTTACAAGATCC+TGG - Chr1:95984833-95984852 MsG0180005771.01.T01:intron 50.0%
! ACTGGGGTTGTTGGTCTAGT+AGG + Chr1:95984269-95984288 None:intergenic 50.0%
! AGGAGTGTGGATTATGGTGG+TGG - Chr1:95984524-95984543 MsG0180005771.01.T01:intron 50.0%
! GGAGGTATGTTACCTAGCCA+AGG + Chr1:95988165-95988184 None:intergenic 50.0%
! TTGGTGCTCTTAAGGTTCCG+AGG - Chr1:95984756-95984775 MsG0180005771.01.T01:intron 50.0%
!! CCATCTAGTTCTTGGGGGAA+AGG + Chr1:95988214-95988233 None:intergenic 50.0%
!! CTTGGTAGCGGAGATCCTAA+AGG - Chr1:95989833-95989852 MsG0180005771.01.T01:CDS 50.0%
!! TCTAGTTCTTGGGGGAAAGG+GGG + Chr1:95988211-95988230 None:intergenic 50.0%
!!! GCAATTGGCTTTTGGCCTTG+AGG + Chr1:95989123-95989142 None:intergenic 50.0%
AAGCAAGGGTTCCTATGGGG+AGG + Chr1:95989073-95989092 None:intergenic 55.0%
AAGGTTCCGAGGGAGAATCG+TGG - Chr1:95984767-95984786 MsG0180005771.01.T01:intron 55.0%
ACCACCACCACTCTATTCGC+AGG - Chr1:95986157-95986176 MsG0180005771.01.T01:intron 55.0%
AGCAAGGGTTCCTATGGGGA+GGG + Chr1:95989072-95989091 None:intergenic 55.0%
AGCACTTGACGCCAACCACT+TGG + Chr1:95988078-95988097 None:intergenic 55.0%
CATAGAGAGAGAGGGGAAGC+GGG - Chr1:95989720-95989739 MsG0180005771.01.T01:CDS 55.0%
CTCCTATAAGGGGGAATGCG+CGG - Chr1:95984966-95984985 MsG0180005771.01.T01:intron 55.0%
GACCCTCGGATCAACATCGA+TGG - Chr1:95984459-95984478 MsG0180005771.01.T01:CDS 55.0%
GCATAGAGAGAGAGGGGAAG+CGG - Chr1:95989719-95989738 MsG0180005771.01.T01:CDS 55.0%
GCATCTTAGCCCAGATCCAG+GGG + Chr1:95988759-95988778 None:intergenic 55.0%
GCTTCAGGAACTGGGGTTGT+TGG + Chr1:95984278-95984297 None:intergenic 55.0%
GGAGAGAAGTCTCTCCTCCA+AGG - Chr1:95986112-95986131 MsG0180005771.01.T01:intron 55.0%
GGCCATCGATGTTGATCCGA+GGG + Chr1:95984464-95984483 None:intergenic 55.0%
GGGTGAGAATTCTCGACCCT+CGG - Chr1:95984445-95984464 MsG0180005771.01.T01:CDS 55.0%
GTCTTCCTTAGCAGCCATGC+AGG - Chr1:95989902-95989921 MsG0180005771.01.T01:CDS 55.0%
GTGCATCTTAGCCCAGATCC+AGG + Chr1:95988761-95988780 None:intergenic 55.0%
TACTCAGACTCCCTCCCCAT+AGG - Chr1:95989059-95989078 MsG0180005771.01.T01:CDS 55.0%
TCCTGCGAATAGAGTGGTGG+TGG + Chr1:95986161-95986180 None:intergenic 55.0%
TGGCCATCGATGTTGATCCG+AGG + Chr1:95984465-95984484 None:intergenic 55.0%
! AAGCGGAAGACGGAGAGTAC+TGG + Chr1:95987423-95987442 None:intergenic 55.0%
! TGTTGGGGCCTTTGCCCTTT+TGG + Chr1:95986475-95986494 None:intergenic 55.0%
AGAGAGGGGAAGCGGGAGTT+GGG - Chr1:95989727-95989746 MsG0180005771.01.T01:CDS 60.0%
AGGAGTAACCCTCCGTCGCT+CGG + Chr1:95984402-95984421 None:intergenic 60.0%
CCCCCTTGATGGAGAAGACG+CGG + Chr1:95985023-95985042 None:intergenic 60.0%
CCGCGTCTTCTCCATCAAGG+GGG - Chr1:95985020-95985039 MsG0180005771.01.T01:intron 60.0%
GCCGCGTCTTCTCCATCAAG+GGG - Chr1:95985019-95985038 MsG0180005771.01.T01:intron 60.0%
GGCCGCGTCTTCTCCATCAA+GGG - Chr1:95985018-95985037 MsG0180005771.01.T01:intron 60.0%
TTCGTCTGTCTCGACCGTGC+TGG + Chr1:95984485-95984504 None:intergenic 60.0%
CGGCCGCGTCTTCTCCATCA+AGG - Chr1:95985017-95985036 MsG0180005771.01.T01:intron 65.0%
GAGAGAGGGGAAGCGGGAGT+TGG - Chr1:95989726-95989745 MsG0180005771.01.T01:CDS 65.0%
GGAGTAACCCTCCGTCGCTC+GGG + Chr1:95984401-95984420 None:intergenic 65.0%
GGCCGCGCATTCCCCCTTAT+AGG + Chr1:95984971-95984990 None:intergenic 65.0%
AAGCCGTCACGCCCGAGCGA+CGG - Chr1:95984387-95984406 MsG0180005771.01.T01:intron 70.0%
TCGCTCGGGCGTGACGGCTT+TGG + Chr1:95984387-95984406 None:intergenic 70.0%
CCTCCGTCGCTCGGGCGTGA+CGG + Chr1:95984393-95984412 None:intergenic 75.0%
CGTCACGCCCGAGCGACGGA+GGG - Chr1:95984391-95984410 MsG0180005771.01.T01:CDS 75.0%
! CCGTCACGCCCGAGCGACGG+AGG - Chr1:95984390-95984409 MsG0180005771.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 95983829 95990483 95983829 ID=MsG0180005771.01;Name=MsG0180005771.01
Chr1 mRNA 95983829 95990483 95983829 ID=MsG0180005771.01.T01;Parent=MsG0180005771.01;Name=MsG0180005771.01.T01;_AED=0.43;_eAED=0.43;_QI=128|1|1|1|1|1|6|420|603
Chr1 exon 95983829 95984308 95983829 ID=MsG0180005771.01.T01:exon:16144;Parent=MsG0180005771.01.T01
Chr1 exon 95984389 95984496 95984389 ID=MsG0180005771.01.T01:exon:16143;Parent=MsG0180005771.01.T01
Chr1 exon 95986687 95986776 95986687 ID=MsG0180005771.01.T01:exon:16142;Parent=MsG0180005771.01.T01
Chr1 exon 95986855 95986971 95986855 ID=MsG0180005771.01.T01:exon:16141;Parent=MsG0180005771.01.T01
Chr1 exon 95987139 95987258 95987139 ID=MsG0180005771.01.T01:exon:16140;Parent=MsG0180005771.01.T01
Chr1 exon 95989039 95990483 95989039 ID=MsG0180005771.01.T01:exon:16139;Parent=MsG0180005771.01.T01
Chr1 five_prime_UTR 95990356 95990483 95990356 ID=MsG0180005771.01.T01:five_prime_utr;Parent=MsG0180005771.01.T01
Chr1 CDS 95989039 95990355 95989039 ID=MsG0180005771.01.T01:cds;Parent=MsG0180005771.01.T01
Chr1 CDS 95987139 95987258 95987139 ID=MsG0180005771.01.T01:cds;Parent=MsG0180005771.01.T01
Chr1 CDS 95986855 95986971 95986855 ID=MsG0180005771.01.T01:cds;Parent=MsG0180005771.01.T01
Chr1 CDS 95986687 95986776 95986687 ID=MsG0180005771.01.T01:cds;Parent=MsG0180005771.01.T01
Chr1 CDS 95984389 95984496 95984389 ID=MsG0180005771.01.T01:cds;Parent=MsG0180005771.01.T01
Chr1 CDS 95984249 95984308 95984249 ID=MsG0180005771.01.T01:cds;Parent=MsG0180005771.01.T01
Chr1 three_prime_UTR 95983829 95984248 95983829 ID=MsG0180005771.01.T01:three_prime_utr;Parent=MsG0180005771.01.T01
Gene Sequence

>MsG0180005771.01.T01

ATGGTGGCTGCCATTTCTGAAAACCCATTAACCTCTTCAAGGTCCGACATCAACAACAACAACAACAACAACAACAATGGTGTCTTACCCAGAAGAAAAGGTAGACAAATTTCTTCTAGGTACATGTCTCCTTCACCTTCATCTTCTACTACAACTACAACAACATCTTCTTCAACAACAACAACAGTGTCTTCTTCTTCTTCTTCTTCAAGAAGATTTGCTTCACCACTTTTGTCACGTTCAACAAATTCATCATCTTCAACACCAGTTGCTGTTCCTAAACGTTCTCAATCTGTGGACCGTAGGAGACCTACTAGACCAACAACCCCAGTTCCTGAAGCAACTAAGCTTCTAGTAACTTCTACTAGGAGTTTGTCTGTTTCTTTTCAAGGTGAGGCTTTTTCACTTCCTATTAGTAAAAGTAAAGCCAAAGCCGTCACGCCCGAGCGACGGAGGGTTACTCCTTCTGTTGCTGGAAAAGGAGATCAGGGTGAGAATTCTCGACCCTCGGATCAACATCGATGGCCAGCACGGTCGAGACAGACGAACACGAATAATCACTTGTCAAGGAGTGTGGATTATGGTGGTGGTGAGAAGAAAGTTGTACGTGCATTGCAACAATCAATGGTTATGGAGAGTGGTAGAAGAAGAGATTCTTTTGATGGATTAGGTGGTTTGAGTTTGGATTTAGGGAAAACTACTCAATTGAATGAACATTCTTTGAATTATGATGTTAATGCTTCTGATACTGATAGTGTTTCATCTGGTAGTAATTCAGGAGGAGGACATGATTCTTCTCTTGGTGCTCTTAAGGTTCCGAGGGAGAATCGTGGTATTGTTGTTTCTTCCAAGTTTTGGCAGGAAACTAATAGCCGGTTGCGACGGTTACAAGATCCTGGTTCACCTTTGTCAACTAGTCCTGCTTCAAGGATCAGTGTTCCATCTAAGAATTCTCAATTGAAAAGGTATAATAGTGATGGTCCTATGATGTCGCCGAGAACAATGGCTTCTCCTATAAGGGGGAATGCGCGGCCTGCTTCGCCTAGTAAACTTTGGGCATCGGCCGCGTCTTCTCCATCAAGGGGGTTTTCTAGTCCTTCTAAGGTGAGAAGTGCGGTTGCTAGCACCATCAATAGTAATTCTGGTAGTTCGCCTTCGATTCTTAGCTTCTCTGCTGATGTGAGGAGAGGGAAGATAGGGGAAGATCGGATATTTGATGCGCATACCTTGAGGCTTCTTTATAATCGGTATGTGCAGTGGCGGTTCGTTAATGCTAGGGCTGATGCTACCTTTATGGTGCAGAAATTGAATGCAGAGACACATTTGTGGAACGCATGGGTAACAATCTCAGAGCTTCGGCATTCAGTCATACTTAAAAGAATCAAGCTGGTATTGCTGAGGCAAAAGTTGAAGCTCACTTCCATTCTAAAGGGACAGATTTCGTATTTGGAAGAATGGGCCCTTTTAGATAGAGATCACTCCAGTTCTGTACTTGGAGCAACTGAAGCTTTGAGGGCCAGTACTCTCCGTCTTCCGCTTGTTGAAAAAGCAACAGCCGATGTGCCAAATTTGAAGGATGCTTTGGGGTCCGCAGTTGATGTGATGCAAGCAATGGCATCCTCAATATATTCTCTTTCGTCAAAGGTGGAAGAAACTAACTGCTTGGTAGCGGAGATCCTAAAGGTAACATCAAAGGAAAGGTTTTTGCTTCAACAATGCAAGGATTTTTTGTCTTCCTTAGCAGCCATGCAGGTCAAGGATTGTAGCTTAAGAACGCATATGTTACAACTTTCTCGTGCACCAGCTTCTTAA
Protein sequence

>MsG0180005771.01.T01

MVAAISENPLTSSRSDINNNNNNNNNGVLPRRKGRQISSRYMSPSPSSSTTTTTTSSSTTTTVSSSSSSSRRFASPLLSRSTNSSSSTPVAVPKRSQSVDRRRPTRPTTPVPEATKLLVTSTRSLSVSFQGEAFSLPISKSKAKAVTPERRRVTPSVAGKGDQGENSRPSDQHRWPARSRQTNTNNHLSRSVDYGGGEKKVVRALQQSMVMESGRRRDSFDGLGGLSLDLGKTTQLNEHSLNYDVNASDTDSVSSGSNSGGGHDSSLGALKVPRENRGIVVSSKFWQETNSRLRRLQDPGSPLSTSPASRISVPSKNSQLKRYNSDGPMMSPRTMASPIRGNARPASPSKLWASAASSPSRGFSSPSKVRSAVASTINSNSGSSPSILSFSADVRRGKIGEDRIFDAHTLRLLYNRYVQWRFVNARADATFMVQKLNAETHLWNAWVTISELRHSVILKRIKLVLLRQKLKLTSILKGQISYLEEWALLDRDHSSSVLGATEALRASTLRLPLVEKATADVPNLKDALGSAVDVMQAMASSIYSLSSKVEETNCLVAEILKVTSKERFLLQQCKDFLSSLAAMQVKDCSLRTHMLQLSRAPAS*