AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005823.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005823.01.T01 MTR_1g107495 96.933 163 5 0 15 177 1 163 4.47e-113 318
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005823.01.T01 AT2G01640 53.103 145 58 6 15 156 1 138 2.49e-36 124
MsG0180005823.01.T01 AT2G01640 53.103 145 58 6 15 156 1 138 2.49e-36 124

Find 49 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCCCTTCTAATTTCCTTT+TGG 0.161969 1:-96585019 MsG0180005823.01.T01:intron
TGTTTCTCTGCTACTGGTTC+TGG 0.277305 1:+96582992 None:intergenic
CTCTTGTATGGATGCTATTA+TGG 0.318660 1:-96582875 MsG0180005823.01.T01:three_prime_UTR
TTCGCTCTTGGATACACTTC+CGG 0.357680 1:-96583279 MsG0180005823.01.T01:CDS
GGTTGTTGTTTCTCTGCTAC+TGG 0.367383 1:+96582986 None:intergenic
CTGCCATTCATCAACACTTA+AGG 0.392107 1:-96583024 MsG0180005823.01.T01:CDS
AAACCCAAAAGGAAATTAGA+AGG 0.392217 1:+96585015 None:intergenic
TGTGTGCAGGTCAGATTCAT+TGG 0.408805 1:-96584792 MsG0180005823.01.T01:intron
CGCTTTCTTCATACTCGCAA+TGG 0.418373 1:-96584916 MsG0180005823.01.T01:intron
GATATATAATGCCTCTTGTA+TGG 0.418588 1:-96582887 MsG0180005823.01.T01:exon
GCTTTCTTCATACTCGCAAT+GGG 0.419104 1:-96584915 MsG0180005823.01.T01:intron
ATATAACCTCTCTTCGCTCT+TGG 0.450344 1:-96583291 MsG0180005823.01.T01:CDS
ACGAGGGCGACGCAGGTCGC+AGG 0.453757 1:+96585072 None:intergenic
TGGGGCTGGACTGAAGTCTA+TGG 0.458997 1:-96582909 MsG0180005823.01.T01:CDS
TACCTTCGAAATAGACTTTG+TGG 0.466409 1:+96584431 None:intergenic
TATGCTTGATAAATTTAAGA+TGG 0.468387 1:+96582747 None:intergenic
GTAATTATTCATCAGATTGA+AGG 0.473506 1:-96583104 MsG0180005823.01.T01:intron
GGCGACGCAGGTCGCAGGGA+AGG 0.481810 1:+96585077 None:intergenic
CAGAGAAACGAGGGCGACGC+AGG 0.519219 1:+96585065 None:intergenic
AATAGACTTTGTGGCGGTCA+AGG 0.521103 1:+96584440 None:intergenic
CGAGGGCGACGCAGGTCGCA+GGG 0.524194 1:+96585073 None:intergenic
GCCCTCGTTTCTCTGTTCAC+AGG 0.527932 1:-96585057 MsG0180005823.01.T01:five_prime_UTR
TTCTGTGGTGCATTCAACTC+CGG 0.528288 1:+96583260 None:intergenic
TCCTCATTGCATGGTTTCTG+TGG 0.529876 1:+96583245 None:intergenic
ATGCAATGAGGATAACTTCA+AGG 0.532567 1:-96583234 MsG0180005823.01.T01:CDS
GAGAAAACATCAAAGGCGGC+AGG 0.543503 1:-96583327 MsG0180005823.01.T01:CDS
TTCATTCCAAGTGAATCCCT+TGG 0.548105 1:-96583047 MsG0180005823.01.T01:CDS
GACGCAGGTCGCAGGGAAGG+AGG 0.549623 1:+96585080 None:intergenic
GTGTTGATGAATGGCAGCCA+AGG 0.549692 1:+96583030 None:intergenic
TTGAAGTTATCCTCATTGCA+TGG 0.556750 1:+96583236 None:intergenic
AGATTCATTGGATTCAAAGT+CGG 0.561288 1:-96584780 MsG0180005823.01.T01:CDS
CGCCACAAAGTCTATTTCGA+AGG 0.569428 1:-96584433 MsG0180005823.01.T01:intron
TCGCAGGGAAGGAGGACGAG+AGG 0.593215 1:+96585088 None:intergenic
TGGCAGCCAAGGGATTCACT+TGG 0.596398 1:+96583041 None:intergenic
GCTCCTTAAGTGTTGATGAA+TGG 0.602260 1:+96583021 None:intergenic
AGAATCAGAGAAAACATCAA+AGG 0.605134 1:-96583334 MsG0180005823.01.T01:CDS
GTCGTGTAATGCTTCACAGA+AGG 0.605143 1:+96582777 None:intergenic
TGTTGATGAATGGCAGCCAA+GGG 0.606578 1:+96583031 None:intergenic
CAATGGGGAAGACAAATACA+AGG 0.620450 1:-96584899 MsG0180005823.01.T01:intron
CATAATAGCATCCATACAAG+AGG 0.622729 1:+96582876 None:intergenic
AACCCAAAAGGAAATTAGAA+GGG 0.625955 1:+96585016 None:intergenic
TTATTCATCAGATTGAAGGA+AGG 0.642626 1:-96583100 MsG0180005823.01.T01:intron
ATCAGAGAAAACATCAAAGG+CGG 0.644411 1:-96583331 MsG0180005823.01.T01:CDS
ACCTGTGAACAGAGAAACGA+GGG 0.649138 1:+96585056 None:intergenic
GTGTATCCAAGAGCGAAGAG+AGG 0.658487 1:+96583285 None:intergenic
CTTTCTTCATACTCGCAATG+GGG 0.669266 1:-96584914 MsG0180005823.01.T01:intron
ACCACAGAAACCATGCAATG+AGG 0.679684 1:-96583246 MsG0180005823.01.T01:CDS
CTTCGAAATAGACTTTGTGG+CGG 0.705385 1:+96584434 None:intergenic
TACCTGTGAACAGAGAAACG+AGG 0.769705 1:+96585055 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTAAAATATTTATCGAAAT+TGG + Chr1:96584112-96584131 None:intergenic 15.0%
!!! ATATGAAGAACTTTAAAAAA+GGG + Chr1:96585010-96585029 None:intergenic 15.0%
!!! ATTTCGATAAATATTTTAAG+AGG - Chr1:96584112-96584131 MsG0180005823.01.T01:intron 15.0%
!!! TATATGAAGAACTTTAAAAA+AGG + Chr1:96585011-96585030 None:intergenic 15.0%
!! AGTTGCAATTTAATATCAAA+TGG + Chr1:96583939-96583958 None:intergenic 20.0%
!! GTTGCAATTTAATATCAAAT+GGG + Chr1:96583938-96583957 None:intergenic 20.0%
!! TTTACATATCAAATGTATAG+AGG + Chr1:96584714-96584733 None:intergenic 20.0%
!!! TACTATCATAAACCAAATTT+TGG + Chr1:96583748-96583767 None:intergenic 20.0%
!!! TAGAAAGTAACTTTGATTTT+CGG + Chr1:96583001-96583020 None:intergenic 20.0%
!!! TATGAAGAACTTTAAAAAAG+GGG + Chr1:96585009-96585028 None:intergenic 20.0%
! AAGAAAAAAGCGAATGTAAA+TGG - Chr1:96584895-96584914 MsG0180005823.01.T01:intron 25.0%
! AAGATGTTTGTAAGTGTTTA+TGG + Chr1:96584230-96584249 None:intergenic 25.0%
! AATTCTATACCAGTAAGTTT+GGG - Chr1:96583124-96583143 MsG0180005823.01.T01:intron 25.0%
! AGAAAAAAGCGAATGTAAAT+GGG - Chr1:96584896-96584915 MsG0180005823.01.T01:intron 25.0%
! ATACATATCAAAAAGAACCT+TGG + Chr1:96584439-96584458 None:intergenic 25.0%
! ATAGTTCTTCACTTATGAAA+AGG + Chr1:96584264-96584283 None:intergenic 25.0%
! ATATTAAATTGCAACTCACT+TGG - Chr1:96583943-96583962 MsG0180005823.01.T01:intron 25.0%
! CAAGATTTAGCATTTAAACA+CGG + Chr1:96583865-96583884 None:intergenic 25.0%
! CAGAAAATCAATAATACTCA+TGG + Chr1:96584485-96584504 None:intergenic 25.0%
! CTAATTAACTTCATTATGCT+GGG - Chr1:96583484-96583503 MsG0180005823.01.T01:intron 25.0%
! GTAATTATTCATCAGATTGA+AGG - Chr1:96584753-96584772 MsG0180005823.01.T01:CDS 25.0%
! TAAACACTTACAAACATCTT+AGG - Chr1:96584230-96584249 MsG0180005823.01.T01:intron 25.0%
! TAACATCAATTCACAATCAA+TGG + Chr1:96583519-96583538 None:intergenic 25.0%
! TGAGTAAAACATAAACACAT+AGG + Chr1:96583285-96583304 None:intergenic 25.0%
! TGGTTTATGATAGTACATTA+TGG - Chr1:96583753-96583772 MsG0180005823.01.T01:intron 25.0%
! TGTAATTCGAAAAAACTTGA+TGG + Chr1:96583150-96583169 None:intergenic 25.0%
! TTGAGATAATTAGTATGTTC+TGG + Chr1:96584338-96584357 None:intergenic 25.0%
!! AATTCAACTGTTTTGTCATT+AGG + Chr1:96583200-96583219 None:intergenic 25.0%
!! ATAATTAGTATGTTCTGGTT+TGG + Chr1:96584333-96584352 None:intergenic 25.0%
!! GATGCATTAGTATAATTTTG+TGG - Chr1:96583907-96583926 MsG0180005823.01.T01:intron 25.0%
!!! ATTTACATTCGCTTTTTTCT+TGG + Chr1:96584896-96584915 None:intergenic 25.0%
!!! TTGGATTAGTTCTTAAATGA+TGG + Chr1:96584314-96584333 None:intergenic 25.0%
!!! TTTACATTCGCTTTTTTCTT+GGG + Chr1:96584895-96584914 None:intergenic 25.0%
AAAATAGTATTTGTGACCCT+CGG - Chr1:96584731-96584750 MsG0180005823.01.T01:intron 30.0%
AAACCCAAAAGGAAATTAGA+AGG + Chr1:96582845-96582864 None:intergenic 30.0%
AAATTAAAACGCAATTGCTG+AGG - Chr1:96583238-96583257 MsG0180005823.01.T01:CDS 30.0%
AACCCAAAAGGAAATTAGAA+GGG + Chr1:96582844-96582863 None:intergenic 30.0%
AATCTGATGAATAATTACCG+AGG + Chr1:96584751-96584770 None:intergenic 30.0%
AGAATCAGAGAAAACATCAA+AGG - Chr1:96584523-96584542 MsG0180005823.01.T01:intron 30.0%
AGATTCATTGGATTCAAAGT+CGG - Chr1:96583077-96583096 MsG0180005823.01.T01:CDS 30.0%
AGGAAGAAAAAATCAAAAGC+TGG - Chr1:96584928-96584947 MsG0180005823.01.T01:intron 30.0%
ATCTGATGAATAATTACCGA+GGG + Chr1:96584750-96584769 None:intergenic 30.0%
ATGTAAATGGGTCAAAAAAG+AGG - Chr1:96584908-96584927 MsG0180005823.01.T01:intron 30.0%
CAATTCTATACCAGTAAGTT+TGG - Chr1:96583123-96583142 MsG0180005823.01.T01:intron 30.0%
GAAGAAAAAATCAAAAGCTG+GGG - Chr1:96584930-96584949 MsG0180005823.01.T01:intron 30.0%
GATATATAATGCCTCTTGTA+TGG - Chr1:96584970-96584989 MsG0180005823.01.T01:intron 30.0%
GCTAATTAACTTCATTATGC+TGG - Chr1:96583483-96583502 MsG0180005823.01.T01:intron 30.0%
GGAAGAAAAAATCAAAAGCT+GGG - Chr1:96584929-96584948 MsG0180005823.01.T01:intron 30.0%
GGAATCAGATTTGCATAAAT+GGG + Chr1:96583035-96583054 None:intergenic 30.0%
TATATAGAAATTGTGCGATC+AGG + Chr1:96584393-96584412 None:intergenic 30.0%
TGTATGAAGTTTATCGTTGA+TGG - Chr1:96583309-96583328 MsG0180005823.01.T01:CDS 30.0%
TTACAAACATCTTAGGAGTA+AGG - Chr1:96584237-96584256 MsG0180005823.01.T01:intron 30.0%
TTATTCATCAGATTGAAGGA+AGG - Chr1:96584757-96584776 MsG0180005823.01.T01:CDS 30.0%
! CATAATGAACAAGAAAGTAC+TGG + Chr1:96583569-96583588 None:intergenic 30.0%
! GATTAGTTCTTAAATGATGG+AGG + Chr1:96584311-96584330 None:intergenic 30.0%
! TGGTAGAATTGATAGTAACT+GGG - Chr1:96583963-96583982 MsG0180005823.01.T01:intron 30.0%
! TTCCCTTCTAATTTCCTTTT+GGG - Chr1:96582839-96582858 MsG0180005823.01.T01:three_prime_UTR 30.0%
! TTGGTAGAATTGATAGTAAC+TGG - Chr1:96583962-96583981 MsG0180005823.01.T01:intron 30.0%
! TTTTCCAACAACTTCAGATT+AGG - Chr1:96583635-96583654 MsG0180005823.01.T01:intron 30.0%
!!! GCTTGTGTTTGTTTTGTAAT+AGG - Chr1:96582914-96582933 MsG0180005823.01.T01:CDS 30.0%
AACAACTTCAGATTAGGACA+AGG - Chr1:96583641-96583660 MsG0180005823.01.T01:intron 35.0%
AACAAGAAGTGAAACCCAAA+AGG + Chr1:96582856-96582875 None:intergenic 35.0%
ATCAGAGAAAACATCAAAGG+CGG - Chr1:96584526-96584545 MsG0180005823.01.T01:intron 35.0%
ATGCAATGAGGATAACTTCA+AGG - Chr1:96584623-96584642 MsG0180005823.01.T01:intron 35.0%
CATAATAGCATCCATACAAG+AGG + Chr1:96584984-96585003 None:intergenic 35.0%
CGGAATCAGATTTGCATAAA+TGG + Chr1:96583036-96583055 None:intergenic 35.0%
CTCTTGTATGGATGCTATTA+TGG - Chr1:96584982-96585001 MsG0180005823.01.T01:intron 35.0%
GGTAAAAATCTCATTGTCAG+CGG - Chr1:96583445-96583464 MsG0180005823.01.T01:intron 35.0%
GTTCATGTGATTTAACGAGT+TGG - Chr1:96583721-96583740 MsG0180005823.01.T01:intron 35.0%
TAAGATATGACTATCAGAGC+AGG + Chr1:96583694-96583713 None:intergenic 35.0%
TACCTTCGAAATAGACTTTG+TGG + Chr1:96583429-96583448 None:intergenic 35.0%
TCTTGTTCATTATGCTTGCT+GGG - Chr1:96583575-96583594 MsG0180005823.01.T01:intron 35.0%
TTCTTGTTCATTATGCTTGC+TGG - Chr1:96583574-96583593 MsG0180005823.01.T01:intron 35.0%
TTGAAGTTATCCTCATTGCA+TGG + Chr1:96584624-96584643 None:intergenic 35.0%
! CTTCCCTTCTAATTTCCTTT+TGG - Chr1:96582838-96582857 MsG0180005823.01.T01:three_prime_UTR 35.0%
! TAACGAGTTGGACCAAAATT+TGG - Chr1:96583733-96583752 MsG0180005823.01.T01:intron 35.0%
! TAGTTCTTAAATGATGGAGG+AGG + Chr1:96584308-96584327 None:intergenic 35.0%
! TTGTCCTAATCTGAAGTTGT+TGG + Chr1:96583642-96583661 None:intergenic 35.0%
!! ACAAAGTACTGTTAAGCTTC+AGG + Chr1:96584078-96584097 None:intergenic 35.0%
!! GAAGTTTATCGTTGATGGTT+TGG - Chr1:96583314-96583333 MsG0180005823.01.T01:CDS 35.0%
!!! TGAGGTACTGGTTTTGTATA+AGG - Chr1:96583256-96583275 MsG0180005823.01.T01:CDS 35.0%
AAAAAATCAAAAGCTGGGGC+TGG - Chr1:96584934-96584953 MsG0180005823.01.T01:intron 40.0%
AAAAATCTCATTGTCAGCGG+AGG - Chr1:96583448-96583467 MsG0180005823.01.T01:intron 40.0%
AGTACTGTTAAGCTTCAGGT+CGG + Chr1:96584074-96584093 None:intergenic 40.0%
ATATAACCTCTCTTCGCTCT+TGG - Chr1:96584566-96584585 MsG0180005823.01.T01:intron 40.0%
CAAAAACAGCAGAAGTTGTG+AGG + Chr1:96583373-96583392 None:intergenic 40.0%
CAATGGGGAAGACAAATACA+AGG - Chr1:96582958-96582977 MsG0180005823.01.T01:CDS 40.0%
CATTGCGAGTATGAAGAAAG+CGG + Chr1:96582943-96582962 None:intergenic 40.0%
CCAAGTTACTAACTGAACCA+AGG - Chr1:96584419-96584438 MsG0180005823.01.T01:intron 40.0%
CCTTGGTTCAGTTAGTAACT+TGG + Chr1:96584422-96584441 None:intergenic 40.0%
CTGCCATTCATCAACACTTA+AGG - Chr1:96584833-96584852 MsG0180005823.01.T01:intron 40.0%
CTTCGAAATAGACTTTGTGG+CGG + Chr1:96583426-96583445 None:intergenic 40.0%
CTTTCTTCATACTCGCAATG+GGG - Chr1:96582943-96582962 MsG0180005823.01.T01:CDS 40.0%
GCTTTCTTCATACTCGCAAT+GGG - Chr1:96582942-96582961 MsG0180005823.01.T01:CDS 40.0%
TTCATTCCAAGTGAATCCCT+TGG - Chr1:96584810-96584829 MsG0180005823.01.T01:intron 40.0%
!! AGAAAGTACTGGAACATGTC+TGG + Chr1:96583558-96583577 None:intergenic 40.0%
!! GAAAGTACTGGAACATGTCT+GGG + Chr1:96583557-96583576 None:intergenic 40.0%
!! GCTCCTTAAGTGTTGATGAA+TGG + Chr1:96584839-96584858 None:intergenic 40.0%
!!! AACTTCTGCTGTTTTTGCAG+AGG - Chr1:96583376-96583395 MsG0180005823.01.T01:intron 40.0%
AAACGCAATTGCTGAGGTAC+TGG - Chr1:96583244-96583263 MsG0180005823.01.T01:CDS 45.0%
AATAGACTTTGTGGCGGTCA+AGG + Chr1:96583420-96583439 None:intergenic 45.0%
ACCACAGAAACCATGCAATG+AGG - Chr1:96584611-96584630 MsG0180005823.01.T01:intron 45.0%
ACCTGCACACATGAGAAACT+CGG + Chr1:96583056-96583075 None:intergenic 45.0%
ACCTGTGAACAGAGAAACGA+GGG + Chr1:96582804-96582823 None:intergenic 45.0%
ATATGACTATCAGAGCAGGC+AGG + Chr1:96583690-96583709 None:intergenic 45.0%
CGCCACAAAGTCTATTTCGA+AGG - Chr1:96583424-96583443 MsG0180005823.01.T01:intron 45.0%
CGCTTTCTTCATACTCGCAA+TGG - Chr1:96582941-96582960 MsG0180005823.01.T01:CDS 45.0%
GTACTGTTAAGCTTCAGGTC+GGG + Chr1:96584073-96584092 None:intergenic 45.0%
GTCGTGTAATGCTTCACAGA+AGG + Chr1:96585083-96585102 None:intergenic 45.0%
TACCTGTGAACAGAGAAACG+AGG + Chr1:96582805-96582824 None:intergenic 45.0%
TCCTCATTGCATGGTTTCTG+TGG + Chr1:96584615-96584634 None:intergenic 45.0%
TGTGTGCAGGTCAGATTCAT+TGG - Chr1:96583065-96583084 MsG0180005823.01.T01:CDS 45.0%
TTCGCTCTTGGATACACTTC+CGG - Chr1:96584578-96584597 MsG0180005823.01.T01:intron 45.0%
TTCTGTGGTGCATTCAACTC+CGG + Chr1:96584600-96584619 None:intergenic 45.0%
! ACTTGATGGCCCAAACTTAC+TGG + Chr1:96583136-96583155 None:intergenic 45.0%
! TGTTGATGAATGGCAGCCAA+GGG + Chr1:96584829-96584848 None:intergenic 45.0%
!! GGTTGTTGTTTCTCTGCTAC+TGG + Chr1:96584874-96584893 None:intergenic 45.0%
!! TGTTTCTCTGCTACTGGTTC+TGG + Chr1:96584868-96584887 None:intergenic 45.0%
!!! TTTTTTTATTTTTTTTTTTG+TGG - Chr1:96585041-96585060 MsG0180005823.01.T01:exon 5.0%
ATGTAGTCGACCCCACTTAG+CGG - Chr1:96583789-96583808 MsG0180005823.01.T01:intron 50.0%
CTAAGTGGGGTCGACTACAT+GGG + Chr1:96583789-96583808 None:intergenic 50.0%
GAGAAAACATCAAAGGCGGC+AGG - Chr1:96584530-96584549 MsG0180005823.01.T01:intron 50.0%
GTGTATCCAAGAGCGAAGAG+AGG + Chr1:96584575-96584594 None:intergenic 50.0%
TCAGCGGAGGCTATGGTTAA+TGG - Chr1:96583461-96583480 MsG0180005823.01.T01:intron 50.0%
TCCGAGTTTCTCATGTGTGC+AGG - Chr1:96583052-96583071 MsG0180005823.01.T01:CDS 50.0%
! AAGCCTTTTCCCGCTAAGTG+GGG + Chr1:96583802-96583821 None:intergenic 50.0%
! CAAGCCTTTTCCCGCTAAGT+GGG + Chr1:96583803-96583822 None:intergenic 50.0%
! GTGTTGATGAATGGCAGCCA+AGG + Chr1:96584830-96584849 None:intergenic 50.0%
! TCAAGCCTTTTCCCGCTAAG+TGG + Chr1:96583804-96583823 None:intergenic 50.0%
CTCATTGTCAGCGGAGGCTA+TGG - Chr1:96583454-96583473 MsG0180005823.01.T01:intron 55.0%
GCCCTCGTTTCTCTGTTCAC+AGG - Chr1:96582800-96582819 MsG0180005823.01.T01:three_prime_UTR 55.0%
GCTAAGTGGGGTCGACTACA+TGG + Chr1:96583790-96583809 None:intergenic 55.0%
TGGCAGCCAAGGGATTCACT+TGG + Chr1:96584819-96584838 None:intergenic 55.0%
TGGGGCTGGACTGAAGTCTA+TGG - Chr1:96584948-96584967 MsG0180005823.01.T01:intron 55.0%
TGTAGTCGACCCCACTTAGC+GGG - Chr1:96583790-96583809 MsG0180005823.01.T01:intron 55.0%
CGACCCCACTTAGCGGGAAA+AGG - Chr1:96583796-96583815 MsG0180005823.01.T01:intron 60.0%
CAGAGAAACGAGGGCGACGC+AGG + Chr1:96582795-96582814 None:intergenic 65.0%
TCGCAGGGAAGGAGGACGAG+AGG + Chr1:96582772-96582791 None:intergenic 65.0%
GACGCAGGTCGCAGGGAAGG+AGG + Chr1:96582780-96582799 None:intergenic 70.0%
ACGAGGGCGACGCAGGTCGC+AGG + Chr1:96582788-96582807 None:intergenic 75.0%
CGAGGGCGACGCAGGTCGCA+GGG + Chr1:96582787-96582806 None:intergenic 75.0%
GGCGACGCAGGTCGCAGGGA+AGG + Chr1:96582783-96582802 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 96582757 96585122 96582757 ID=MsG0180005823.01;Name=MsG0180005823.01
Chr1 mRNA 96582757 96585122 96582757 ID=MsG0180005823.01.T01;Parent=MsG0180005823.01;Name=MsG0180005823.01.T01;_AED=0.49;_eAED=0.49;_QI=67|1|1|1|0.8|0.66|6|144|177
Chr1 exon 96582757 96583111 96582757 ID=MsG0180005823.01.T01:exon:10644;Parent=MsG0180005823.01.T01
Chr1 exon 96583206 96583354 96583206 ID=MsG0180005823.01.T01:exon:10643;Parent=MsG0180005823.01.T01
Chr1 exon 96584434 96584483 96584434 ID=MsG0180005823.01.T01:exon:10642;Parent=MsG0180005823.01.T01
Chr1 exon 96584744 96584805 96584744 ID=MsG0180005823.01.T01:exon:10641;Parent=MsG0180005823.01.T01
Chr1 exon 96584900 96584926 96584900 ID=MsG0180005823.01.T01:exon:10640;Parent=MsG0180005823.01.T01
Chr1 exon 96585021 96585122 96585021 ID=MsG0180005823.01.T01:exon:10639;Parent=MsG0180005823.01.T01
Chr1 five_prime_UTR 96585056 96585122 96585056 ID=MsG0180005823.01.T01:five_prime_utr;Parent=MsG0180005823.01.T01
Chr1 CDS 96585021 96585055 96585021 ID=MsG0180005823.01.T01:cds;Parent=MsG0180005823.01.T01
Chr1 CDS 96584900 96584926 96584900 ID=MsG0180005823.01.T01:cds;Parent=MsG0180005823.01.T01
Chr1 CDS 96584744 96584805 96584744 ID=MsG0180005823.01.T01:cds;Parent=MsG0180005823.01.T01
Chr1 CDS 96584434 96584483 96584434 ID=MsG0180005823.01.T01:cds;Parent=MsG0180005823.01.T01
Chr1 CDS 96583206 96583354 96583206 ID=MsG0180005823.01.T01:cds;Parent=MsG0180005823.01.T01
Chr1 CDS 96582901 96583111 96582901 ID=MsG0180005823.01.T01:cds;Parent=MsG0180005823.01.T01
Chr1 three_prime_UTR 96582757 96582900 96582757 ID=MsG0180005823.01.T01:three_prime_utr;Parent=MsG0180005823.01.T01
Gene Sequence

>MsG0180005823.01.T01

ATGTTCTTCTGTTTCTTCCCTTCTAATTTCCTTTTACTCGCAATGGGGAAGACAAATACAAGGTCAGATTCATTGGATTCAAAGTCGGATCGCAAGTTCGATAAGAAGCTTCAATTCTATACCAAGGTGAAAACTGCTGTTGCTTCCTTGACCGCCACAAAGTCTATTTCGAAGAATCAGAGAAAACATCAAAGGCGGCAGGAAAAATTGAAAGCATATAACCTCTCTTCGCTCTTGGATACACTTCCGGAGTTGAATGCACCACAGAAACCATGCAATGAGGATAACTTCAAGGTCAATTGTAAAACTAGACAGAAATTAGTATTGAAGGAAGGACAACGATTGTGCGAGCTTTTTAAGAATGATTCATTCCAAGTGAATCCCTTGGCTGCCATTCATCAACACTTAAGGAGCACACAACCAGAACCAGTAGCAGAGAAACAACAACCCAAGAAAAAAGCGAATGTAAATGGGTCAAAAAAGAGGAAGAAAAAATCAAAAGCTGGGGCTGGACTGAAGTCTATGGATATATAA
Protein sequence

>MsG0180005823.01.T01

MFFCFFPSNFLLLAMGKTNTRSDSLDSKSDRKFDKKLQFYTKVKTAVASLTATKSISKNQRKHQRRQEKLKAYNLSSLLDTLPELNAPQKPCNEDNFKVNCKTRQKLVLKEGQRLCELFKNDSFQVNPLAAIHQHLRSTQPEPVAEKQQPKKKANVNGSKKRKKKSKAGAGLKSMDI*