AlfalfaGEDB | MsG0180005864.01

M. sativa cultivar ZhongmuNo.1 / MsG0180005864.01

KEGG: -
GO: GO:0003677 GO:0046983
PFAM: PF00319

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005864.01.T01	XP_003592558.1	94.787	211	11	0	1	211	18	228	5.88E-149	423

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005864.01.T01	Q9FKK2	52.632	171	74	3	1	164	16	186	9.93E-51	169

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005864.01.T01	G7IAT8	94.787	211	11	0	1	211	18	228	2.81e-149	423

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type
MsG0380013711.01	MsG0180005864.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005864.01.T01	MTR_1g108510	94.787	211	11	0	1	211	18	228	7.12e-153	423
MsG0180005864.01.T01	MTR_3g030770	92.891	211	15	0	1	211	18	228	1.13e-148	412
MsG0180005864.01.T01	MTR_2g093190	88.626	211	24	0	1	211	18	228	1.42e-140	392
MsG0180005864.01.T01	MTR_1g108580	87.204	211	27	0	1	211	18	228	3.38e-138	386
MsG0180005864.01.T01	MTR_1g105920	76.961	204	37	2	1	196	18	219	2.36e-108	311
MsG0180005864.01.T01	MTR_8g043650	73.832	214	46	2	1	206	18	229	1.59e-107	308
MsG0180005864.01.T01	MTR_1g105910	70.642	218	46	3	1	210	18	225	4.50e-104	300
MsG0180005864.01.T01	MTR_2g030740	73.529	204	44	2	1	196	18	219	3.64e-103	298
MsG0180005864.01.T01	MTR_1g012570	72.059	204	47	2	1	196	18	219	4.74e-101	292
MsG0180005864.01.T01	MTR_3g052920	72.059	204	47	2	1	196	18	219	8.17e-101	291
MsG0180005864.01.T01	MTR_1g105905	67.431	218	53	3	1	210	1	208	1.14e-98	285
MsG0180005864.01.T01	MTR_0121s0080	68.349	218	51	3	1	210	18	225	1.55e-98	286
MsG0180005864.01.T01	MTR_1g075600	62.385	218	64	3	1	210	18	225	3.47e-90	265
MsG0180005864.01.T01	MTR_1g077360	61.009	218	67	3	1	210	18	225	1.47e-89	263
MsG0180005864.01.T01	MTR_7g062350	65.094	212	56	3	7	210	36	237	2.10e-88	261
MsG0180005864.01.T01	MTR_3g052870	68.367	196	49	3	1	196	18	200	5.58e-87	256
MsG0180005864.01.T01	MTR_5g045560	61.468	218	66	3	1	210	18	225	7.23e-87	256
MsG0180005864.01.T01	MTR_5g053390	60.550	218	68	4	1	210	18	225	2.64e-84	250
MsG0180005864.01.T01	MTR_1g106070	73.939	165	35	1	1	157	18	182	6.63e-83	244
MsG0180005864.01.T01	MTR_5g055100	59.174	218	71	3	1	210	18	225	1.21e-82	246
MsG0180005864.01.T01	MTR_2g085280	58.257	218	73	3	1	210	18	225	1.49e-82	245
MsG0180005864.01.T01	MTR_2g085250	59.048	210	76	2	1	202	18	225	2.43e-82	245
MsG0180005864.01.T01	MTR_0121s0100	83.478	115	19	0	1	115	18	132	4.94e-65	197
MsG0180005864.01.T01	MTR_1g075570	58.989	178	51	2	1	170	1	164	3.20e-57	178
MsG0180005864.01.T01	MTR_3g080940	53.374	163	74	1	4	166	21	181	1.05e-56	179
MsG0180005864.01.T01	MTR_3g030780	71.304	115	33	0	1	115	18	132	1.87e-54	170
MsG0180005864.01.T01	MTR_3g067910	61.165	103	40	0	4	106	2	104	3.43e-40	133
MsG0180005864.01.T01	MTR_8g086290	40.132	152	81	2	1	149	21	165	1.30e-32	116
MsG0180005864.01.T01	MTR_1g108500	62.887	97	15	1	5	101	110	185	1.60e-31	117
MsG0180005864.01.T01	MTR_7g028448	42.754	138	67	3	5	142	25	150	9.56e-30	108
MsG0180005864.01.T01	MTR_4g036915	42.754	138	67	3	5	142	25	150	9.56e-30	108
MsG0180005864.01.T01	MTR_2g105290	35.526	152	88	2	1	149	21	165	7.86e-28	103
MsG0180005864.01.T01	MTR_3g067915	65.672	67	23	0	43	109	30	96	3.77e-25	94.7
MsG0180005864.01.T01	MTR_3g067875	76.786	56	13	0	1	56	1	56	2.18e-24	92.0
MsG0180005864.01.T01	MTR_4g127140	34.810	158	83	4	5	149	25	175	4.32e-24	94.7
MsG0180005864.01.T01	MTR_1g063160	48.958	96	44	3	8	101	18	110	7.26e-20	83.2
MsG0180005864.01.T01	MTR_3g067870	62.712	59	22	0	1	59	85	143	1.97e-19	81.6
MsG0180005864.01.T01	MTR_1g047550	64.151	53	19	0	8	60	18	70	7.90e-19	80.5
MsG0180005864.01.T01	MTR_8g079502	64.151	53	19	0	8	60	18	70	9.66e-19	80.5
MsG0180005864.01.T01	MTR_1g054265	59.016	61	25	0	8	68	18	78	1.28e-18	79.7
MsG0180005864.01.T01	MTR_4g131030	37.500	120	60	3	8	112	18	137	1.45e-18	80.9
MsG0180005864.01.T01	MTR_8g051580	64.151	53	19	0	8	60	18	70	1.74e-18	79.7
MsG0180005864.01.T01	MTR_8g046350	38.596	114	62	3	8	118	18	126	1.09e-17	77.0
MsG0180005864.01.T01	MTR_4g102530	50.769	65	32	0	1	65	11	75	5.84e-17	76.3
MsG0180005864.01.T01	MTR_4g094632	37.113	97	59	1	1	97	11	105	1.20e-16	74.3
MsG0180005864.01.T01	MTR_8g033220	27.727	220	119	8	1	199	11	211	3.23e-16	74.7
MsG0180005864.01.T01	MTR_8g033220	27.727	220	119	8	1	199	11	211	3.63e-16	74.7
MsG0180005864.01.T01	MTR_8g022970	34.532	139	78	3	10	142	36	167	3.91e-16	73.6
MsG0180005864.01.T01	MTR_4g094638	38.144	97	59	1	1	96	11	107	6.61e-16	72.8
MsG0180005864.01.T01	MTR_3g005530	50.847	59	29	0	1	59	11	69	7.31e-16	73.6
MsG0180005864.01.T01	MTR_3g102570	44.086	93	49	3	1	92	11	101	9.40e-16	74.7
MsG0180005864.01.T01	MTR_7g075870	50.847	59	29	0	1	59	11	69	3.09e-15	71.6
MsG0180005864.01.T01	MTR_8g033270	48.571	70	34	1	1	68	11	80	3.88e-15	72.0
MsG0180005864.01.T01	MTR_2g009890	49.153	59	30	0	1	59	11	69	4.22e-15	72.4
MsG0180005864.01.T01	MTR_4g093970	55.172	58	26	0	1	58	37	94	1.05e-14	70.9
MsG0180005864.01.T01	MTR_5g066180	47.458	59	31	0	1	59	11	69	1.84e-14	69.7
MsG0180005864.01.T01	MTR_1g053070	44.444	72	40	0	1	72	11	82	1.87e-14	70.1
MsG0180005864.01.T01	MTR_6g464720	50.000	60	29	1	1	59	11	70	2.43e-14	70.1
MsG0180005864.01.T01	MTR_1g101970	50.877	57	28	0	3	59	13	69	3.17e-14	68.6
MsG0180005864.01.T01	MTR_5g032520	26.667	210	127	6	1	188	11	215	3.49e-14	69.3
MsG0180005864.01.T01	MTR_3g109930	32.847	137	82	2	10	142	20	150	3.58e-14	68.2
MsG0180005864.01.T01	MTR_3g452380	43.478	69	39	0	1	69	26	94	3.66e-14	69.3
MsG0180005864.01.T01	MTR_7g075870	50.000	60	29	1	1	59	11	70	5.02e-14	68.6
MsG0180005864.01.T01	MTR_2g017865	34.426	122	74	3	1	117	26	146	6.81e-14	68.9
MsG0180005864.01.T01	MTR_5g031000	47.458	59	31	0	1	59	11	69	7.41e-14	68.2
MsG0180005864.01.T01	MTR_5g031000	47.458	59	31	0	1	59	11	69	7.46e-14	68.6
MsG0180005864.01.T01	MTR_4g109830	46.667	60	31	1	1	59	11	70	1.57e-13	67.4
MsG0180005864.01.T01	MTR_8g087860	47.458	59	31	0	1	59	27	85	1.62e-13	67.8
MsG0180005864.01.T01	MTR_5g032150	45.763	59	32	0	1	59	11	69	1.70e-13	67.4
MsG0180005864.01.T01	MTR_6g015975	50.000	60	29	1	1	59	11	70	3.96e-13	66.6
MsG0180005864.01.T01	MTR_7g016600	50.000	60	29	1	1	59	11	70	4.15e-13	66.6
MsG0180005864.01.T01	MTR_1g041615	35.514	107	60	2	3	108	17	115	5.09e-13	63.9
MsG0180005864.01.T01	MTR_3g437790	31.210	157	89	5	9	156	30	176	1.10e-12	64.3
MsG0180005864.01.T01	MTR_0003s0590	45.763	59	32	0	1	59	11	69	1.46e-12	65.1
MsG0180005864.01.T01	MTR_5g046870	46.667	60	31	1	1	59	11	70	3.99e-12	61.2
MsG0180005864.01.T01	MTR_8g066260	46.667	60	31	1	1	59	11	70	4.12e-12	63.5
MsG0180005864.01.T01	MTR_4g084740	47.619	63	32	1	1	62	11	73	5.70e-12	63.9
MsG0180005864.01.T01	MTR_3g088615	44.262	61	32	1	1	59	11	71	6.70e-12	62.0
MsG0180005864.01.T01	MTR_3g113030	31.056	161	89	7	1	156	11	154	8.32e-12	62.8
MsG0180005864.01.T01	MTR_5g021270	47.541	61	30	1	1	59	11	71	1.34e-11	62.0
MsG0180005864.01.T01	MTR_5g021270	47.541	61	30	1	1	59	11	71	1.35e-11	62.0
MsG0180005864.01.T01	MTR_7g016630	43.333	60	33	1	1	59	11	70	1.45e-11	62.4
MsG0180005864.01.T01	MTR_8g097090	46.667	60	31	1	1	59	11	70	2.37e-11	61.6
MsG0180005864.01.T01	MTR_2g461710	53.191	47	22	0	1	47	11	57	2.38e-11	57.8
MsG0180005864.01.T01	MTR_3g084980	48.333	60	30	1	1	59	11	70	3.10e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005864.01.T01	AT5G60440	52.632	171	74	3	1	164	16	186	1.01e-51	169
MsG0180005864.01.T01	AT2G24840	46.497	157	73	4	1	151	72	223	4.94e-39	135
MsG0180005864.01.T01	AT1G65360	41.420	169	92	4	1	164	16	182	5.05e-34	121
MsG0180005864.01.T01	AT1G01530	42.941	170	89	4	1	166	16	181	6.78e-34	121
MsG0180005864.01.T01	AT4G36590	42.405	158	81	4	1	150	16	171	4.22e-31	114
MsG0180005864.01.T01	AT2G34440	37.879	132	80	2	8	139	18	147	4.67e-24	94.4
MsG0180005864.01.T01	AT3G66656	40.541	111	62	1	8	114	18	128	3.20e-20	84.3
MsG0180005864.01.T01	AT2G45660	53.333	60	28	0	1	60	11	70	5.80e-18	77.8
MsG0180005864.01.T01	AT3G04100	30.921	152	89	4	1	142	23	168	1.83e-17	77.8
MsG0180005864.01.T01	AT2G45660	53.333	60	28	0	1	60	11	70	2.96e-17	77.4
MsG0180005864.01.T01	AT4G09960	37.008	127	70	4	1	120	11	134	3.93e-17	77.0
MsG0180005864.01.T01	AT4G09960	37.008	127	70	4	1	120	12	135	4.43e-17	77.0
MsG0180005864.01.T01	AT4G09960	37.008	127	70	4	1	120	11	134	4.73e-17	77.0
MsG0180005864.01.T01	AT4G09960	37.008	127	70	4	1	120	21	144	5.22e-17	77.0
MsG0180005864.01.T01	AT4G09960	36.434	129	72	4	1	122	37	162	6.15e-17	77.0
MsG0180005864.01.T01	AT4G09960	37.097	124	68	4	1	117	106	226	2.27e-16	76.6
MsG0180005864.01.T01	AT1G72350	31.429	140	63	4	4	143	55	161	3.32e-16	74.7
MsG0180005864.01.T01	AT1G29962	29.333	150	100	2	9	152	25	174	4.64e-16	73.6
MsG0180005864.01.T01	AT1G28460	27.564	156	108	3	1	152	17	171	6.83e-16	72.8
MsG0180005864.01.T01	AT2G45650	52.542	59	28	0	1	59	11	69	1.18e-15	73.6
MsG0180005864.01.T01	AT3G57230	45.763	59	32	0	1	59	11	69	1.52e-15	71.2
MsG0180005864.01.T01	AT4G22950	45.588	68	37	0	1	68	11	78	2.18e-15	71.2
MsG0180005864.01.T01	AT4G37940	47.458	59	31	0	1	59	11	69	3.03e-15	72.0
MsG0180005864.01.T01	AT4G37940	47.458	59	31	0	1	59	11	69	3.67e-15	71.6
MsG0180005864.01.T01	AT4G24540	34.848	132	69	4	8	139	18	132	4.47e-15	71.6
MsG0180005864.01.T01	AT3G57230	45.763	59	32	0	1	59	11	69	5.21e-15	71.6
MsG0180005864.01.T01	AT3G57230	45.763	59	32	0	1	59	11	69	5.21e-15	71.6
MsG0180005864.01.T01	AT4G37940	47.458	59	31	0	1	59	11	69	5.89e-15	70.1
MsG0180005864.01.T01	AT2G22540	50.847	59	29	0	1	59	11	69	8.82e-15	71.2
MsG0180005864.01.T01	AT2G22540	50.847	59	29	0	1	59	11	69	8.82e-15	71.2
MsG0180005864.01.T01	AT4G22950	50.847	59	29	0	1	59	11	69	1.04e-14	70.5
MsG0180005864.01.T01	AT4G22950	50.847	59	29	0	1	59	11	69	1.04e-14	70.5
MsG0180005864.01.T01	AT4G18960	38.462	91	46	1	1	91	27	107	1.74e-14	70.5
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	2.73e-14	68.2
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	2.73e-14	68.2
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	2.73e-14	68.2
MsG0180005864.01.T01	AT5G10140	53.333	60	27	1	1	59	11	70	3.04e-14	68.2
MsG0180005864.01.T01	AT5G51870	49.153	59	30	0	1	59	11	69	3.39e-14	68.2
MsG0180005864.01.T01	AT5G51870	49.153	59	30	0	1	59	11	69	3.94e-14	68.6
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	4.12e-14	67.4
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	4.12e-14	67.4
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	4.12e-14	67.4
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	4.12e-14	67.4
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	4.12e-14	67.4
MsG0180005864.01.T01	AT5G10140	53.333	60	27	1	1	59	11	70	4.27e-14	68.2
MsG0180005864.01.T01	AT5G10140	53.333	60	27	1	1	59	11	70	5.05e-14	68.2
MsG0180005864.01.T01	AT5G10140	53.333	60	27	1	1	59	11	70	5.36e-14	67.8
MsG0180005864.01.T01	AT3G57390	47.458	59	31	0	1	59	11	69	5.49e-14	68.6
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	5.81e-14	65.9
MsG0180005864.01.T01	AT5G51870	49.153	59	30	0	1	59	11	69	6.24e-14	68.6
MsG0180005864.01.T01	AT5G51870	49.153	59	30	0	1	59	21	79	8.38e-14	68.2
MsG0180005864.01.T01	AT5G51870	49.153	59	30	0	1	59	34	92	8.81e-14	67.4
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	1.09e-13	67.4
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	1.09e-13	67.4
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	1.09e-13	67.4
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	1.14e-13	67.4
MsG0180005864.01.T01	AT5G62165	45.763	59	32	0	1	59	11	69	1.14e-13	67.4
MsG0180005864.01.T01	AT2G42830	47.458	59	31	0	1	59	26	84	1.23e-13	68.2
MsG0180005864.01.T01	AT2G42830	47.458	59	31	0	1	59	26	84	1.26e-13	68.2
MsG0180005864.01.T01	AT3G57390	47.458	59	31	0	1	59	11	69	1.37e-13	68.2
MsG0180005864.01.T01	AT4G11880	48.333	60	30	1	1	59	11	70	1.62e-13	66.6
MsG0180005864.01.T01	AT4G11880	48.333	60	30	1	1	59	11	70	1.62e-13	66.6
MsG0180005864.01.T01	AT3G58780	47.458	59	31	0	1	59	26	84	1.87e-13	67.4
MsG0180005864.01.T01	AT3G58780	47.458	59	31	0	1	59	32	90	2.24e-13	67.4
MsG0180005864.01.T01	AT4G11880	48.333	60	30	1	1	59	11	70	2.91e-13	66.6
MsG0180005864.01.T01	AT4G11880	48.333	60	30	1	1	59	11	70	2.91e-13	66.6
MsG0180005864.01.T01	AT3G30260	48.333	60	30	1	1	59	11	70	3.07e-13	67.0
MsG0180005864.01.T01	AT3G58780	47.458	59	31	0	1	59	26	84	3.52e-13	67.0
MsG0180005864.01.T01	AT1G17310	50.000	62	29	1	8	69	64	123	5.47e-13	65.9
MsG0180005864.01.T01	AT5G13790	47.458	59	31	0	1	59	11	69	6.51e-13	66.2
MsG0180005864.01.T01	AT5G13790	47.458	59	31	0	1	59	11	69	6.92e-13	66.2
MsG0180005864.01.T01	AT1G17310	50.000	62	29	1	8	69	75	134	7.17e-13	65.5
MsG0180005864.01.T01	AT2G14210	43.333	60	33	1	1	59	11	70	7.73e-13	65.5
MsG0180005864.01.T01	AT1G77980	50.794	63	30	1	1	62	11	73	8.42e-13	66.6
MsG0180005864.01.T01	AT5G15800	50.000	60	29	1	1	59	11	70	9.50e-13	65.5
MsG0180005864.01.T01	AT2G14210	43.333	60	33	1	1	59	11	70	1.09e-12	65.1
MsG0180005864.01.T01	AT1G22130	38.095	84	51	1	1	83	11	94	1.10e-12	66.2
MsG0180005864.01.T01	AT3G54340	33.065	124	69	5	1	111	11	133	1.15e-12	65.1
MsG0180005864.01.T01	AT1G69120	48.333	60	30	1	1	59	11	70	1.51e-12	64.7
MsG0180005864.01.T01	AT5G15800	50.000	60	29	1	1	59	11	70	1.71e-12	65.1
MsG0180005864.01.T01	AT5G51860	45.763	59	32	0	1	59	11	69	1.76e-12	64.3
MsG0180005864.01.T01	AT1G26310	46.667	60	31	1	1	59	11	70	1.93e-12	64.7
MsG0180005864.01.T01	AT5G51860	45.763	59	32	0	1	59	11	69	2.09e-12	63.9
MsG0180005864.01.T01	AT2G22540	49.153	59	25	1	1	59	11	64	2.24e-12	64.3
MsG0180005864.01.T01	AT5G60910	46.667	60	31	1	1	59	11	70	3.18e-12	63.9
MsG0180005864.01.T01	AT1G69120	48.333	60	30	1	1	59	11	70	4.05e-12	63.9
MsG0180005864.01.T01	AT5G20240	43.750	64	34	1	1	62	11	74	5.33e-12	62.8
MsG0180005864.01.T01	AT5G65050	48.333	60	30	1	1	59	11	70	5.64e-12	62.4
MsG0180005864.01.T01	AT3G02310	48.333	60	30	1	1	59	11	70	6.37e-12	62.4
MsG0180005864.01.T01	AT5G20240	43.750	64	34	1	1	62	11	74	6.45e-12	61.6
MsG0180005864.01.T01	AT1G77950	49.153	59	29	1	5	62	15	73	6.79e-12	63.2
MsG0180005864.01.T01	AT1G77950	49.153	59	29	1	5	62	15	73	6.79e-12	63.2
MsG0180005864.01.T01	AT1G77950	49.153	59	29	1	5	62	15	73	6.79e-12	63.2
MsG0180005864.01.T01	AT1G77950	49.153	59	29	1	5	62	15	73	6.79e-12	63.2
MsG0180005864.01.T01	AT3G61120	44.068	59	33	0	1	59	11	69	9.98e-12	62.8
MsG0180005864.01.T01	AT3G02310	48.333	60	30	1	1	59	11	70	1.81e-11	62.0
MsG0180005864.01.T01	AT1G28450	26.115	157	108	4	1	150	17	172	1.98e-11	60.8
MsG0180005864.01.T01	AT1G24260	46.667	60	31	1	1	59	11	70	2.93e-11	61.6
MsG0180005864.01.T01	AT1G24260	46.667	60	31	1	1	59	11	70	3.02e-11	61.2
MsG0180005864.01.T01	AT1G18750	40.909	66	37	1	1	64	11	76	6.46e-11	61.2
MsG0180005864.01.T01	AT1G18750	40.909	66	37	1	1	64	11	76	7.78e-11	60.8

Find 45 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAACTTGAATTATTCAAAA+AGG	0.249457	1:+96982085	MsG0180005864.01.T01:CDS
TTGCAGCCTCATTTGTTTGA+TGG	0.293834	1:+96982272	MsG0180005864.01.T01:CDS
TGGTGGGCTTGTCCGGTTGA+TGG	0.317499	1:+96982050	MsG0180005864.01.T01:CDS
TCACCATGGCTTCAATAATA+TGG	0.324358	1:+96982307	MsG0180005864.01.T01:CDS
ATTTCAACTTGTTGAGCATT+TGG	0.333632	1:-96982212	None:intergenic
CCTCCGTTTCCTTGAGCAAA+TGG	0.377544	1:-96982019	None:intergenic
GTCTATGACCGTATCAAGAT+TGG	0.398383	1:-96981847	None:intergenic
CTTTCTCAAAGCGCCGTAAC+GGG	0.409500	1:+96981727	MsG0180005864.01.T01:CDS
TCCGGTTGATGGGATGAATA+GGG	0.429925	1:+96982061	MsG0180005864.01.T01:CDS
GTCCGGTTGATGGGATGAAT+AGG	0.433236	1:+96982060	MsG0180005864.01.T01:CDS
GGTGGGCTTGTCCGGTTGAT+GGG	0.441656	1:+96982051	MsG0180005864.01.T01:CDS
TCTATGACCGTATCAAGATT+GGG	0.446553	1:-96981846	None:intergenic
AGGAAACGGAGGCTAAGTTT+TGG	0.457330	1:+96982030	MsG0180005864.01.T01:CDS
CATAGACCGCTATCTTTCTC+TGG	0.460785	1:+96981863	MsG0180005864.01.T01:CDS
AGTGAGCTTTGCACCCTTTG+TGG	0.471832	1:+96981765	MsG0180005864.01.T01:CDS
GTTGAGCATTTGGCTGATGA+TGG	0.476508	1:-96982202	None:intergenic
TCCCTATTCATCCCATCAAC+CGG	0.481029	1:-96982062	None:intergenic
TGAGGCTGCAATTGCAACAT+AGG	0.486430	1:-96982260	None:intergenic
ACTTTCTCAAAGCGCCGTAA+CGG	0.489334	1:+96981726	MsG0180005864.01.T01:CDS
GAGCCATTTGCTCAAGGAAA+CGG	0.489556	1:+96982016	MsG0180005864.01.T01:CDS
AGCAGCATCTGCACCACAAA+GGG	0.494828	1:-96981778	None:intergenic
ACACCATATTATTGAAGCCA+TGG	0.549763	1:-96982310	None:intergenic
TGGTCACCCCAATCTTGATA+CGG	0.553864	1:+96981839	MsG0180005864.01.T01:CDS
ATTGATCCATCAAACAAATG+AGG	0.563188	1:-96982278	None:intergenic
CCTTCTTGAAGAGCCCGTTA+CGG	0.572175	1:-96981740	None:intergenic
GAGGCTGCAATTGCAACATA+GGG	0.578323	1:-96982259	None:intergenic
ATCAAGATTGGGGTGACCAA+AGG	0.581678	1:-96981835	None:intergenic
CCGTAACGGGCTCTTCAAGA+AGG	0.583842	1:+96981740	MsG0180005864.01.T01:CDS
CGGCACCATGCAACTCATTG+AGG	0.589770	1:+96981902	MsG0180005864.01.T01:CDS
CTAGTTGTATTCTCGCCTAG+TGG	0.592221	1:+96981801	MsG0180005864.01.T01:CDS
TGAGCTGAGCCATTTGCTCA+AGG	0.597593	1:+96982010	MsG0180005864.01.T01:CDS
AGCATTGAGTTCACGAACGT+TGG	0.603238	1:-96981937	None:intergenic
TGTATTCTCGCCTAGTGGAA+AGG	0.608216	1:+96981806	MsG0180005864.01.T01:CDS
ATGATGGAGATAAATGTTCG+AGG	0.611297	1:-96982186	None:intergenic
GAGCAGCATCTGCACCACAA+AGG	0.621182	1:-96981779	None:intergenic
AAGGAAAATACCTTTCCACT+AGG	0.627897	1:-96981816	None:intergenic
GTTCACGAACGTTGGCATTG+CGG	0.638735	1:-96981929	None:intergenic
CTATGACCGTATCAAGATTG+GGG	0.641126	1:-96981845	None:intergenic
ATATTATTGAAGCCATGGTG+AGG	0.642989	1:-96982305	None:intergenic
GACTCAAATCAACAACACGC+TGG	0.644948	1:+96981965	MsG0180005864.01.T01:CDS
GTGAGCCTCAATGAGTTGCA+TGG	0.660003	1:-96981907	None:intergenic
CCATTTGCTCAAGGAAACGG+AGG	0.676667	1:+96982019	MsG0180005864.01.T01:CDS
GTGGTACCAGAGAAAGATAG+CGG	0.703250	1:-96981869	None:intergenic
CTGGTACCACCACAAAACAA+CGG	0.718153	1:+96981882	MsG0180005864.01.T01:CDS
GGATCAATGATGCCTCACCA+TGG	0.734402	1:+96982293	MsG0180005864.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TCAACTTGAATTATTCAAAA+AGG	+	Chr1:96982085-96982104	MsG0180005864.01.T01:CDS	20.0%
!	TGAATTATTCAAAAAGGCTT+TGG	+	Chr1:96982091-96982110	MsG0180005864.01.T01:CDS	25.0%
!!!	ATAGGGTTTTGAAAAAATTG+TGG	-	Chr1:96982245-96982264	None:intergenic	25.0%
	ATTGATCCATCAAACAAATG+AGG	-	Chr1:96982281-96982300	None:intergenic	30.0%
!	ATTATTCAAAAAGGCTTTGG+AGG	+	Chr1:96982094-96982113	MsG0180005864.01.T01:CDS	30.0%
!!	ATTTCAACTTGTTGAGCATT+TGG	-	Chr1:96982215-96982234	None:intergenic	30.0%
!!!	CAAACTCATCCATTTTTTGT+TGG	+	Chr1:96982152-96982171	MsG0180005864.01.T01:CDS	30.0%
	AAGGAAAATACCTTTCCACT+AGG	-	Chr1:96981819-96981838	None:intergenic	35.0%
	ACACCATATTATTGAAGCCA+TGG	-	Chr1:96982313-96982332	None:intergenic	35.0%
	ATATTATTGAAGCCATGGTG+AGG	-	Chr1:96982308-96982327	None:intergenic	35.0%
	TCACCATGGCTTCAATAATA+TGG	+	Chr1:96982307-96982326	MsG0180005864.01.T01:CDS	35.0%
	TCTATGACCGTATCAAGATT+GGG	-	Chr1:96981849-96981868	None:intergenic	35.0%
!	ATGATGGAGATAAATGTTCG+AGG	-	Chr1:96982189-96982208	None:intergenic	35.0%
!!!	AGTGGAAAGGTATTTTCCTT+TGG	+	Chr1:96981819-96981838	MsG0180005864.01.T01:CDS	35.0%
!!!	GGGTTTTGAAAAAATTGTGG+TGG	-	Chr1:96982242-96982261	None:intergenic	35.0%
	CTATGACCGTATCAAGATTG+GGG	-	Chr1:96981848-96981867	None:intergenic	40.0%
	GTCTATGACCGTATCAAGAT+TGG	-	Chr1:96981850-96981869	None:intergenic	40.0%
	TTGCAGCCTCATTTGTTTGA+TGG	+	Chr1:96982272-96982291	MsG0180005864.01.T01:CDS	40.0%
!	CTCATCGCCAATCTTTTTCT+CGG	-	Chr1:96981994-96982013	None:intergenic	40.0%
!!	GAAGCGTTGCCAACAAAAAA+TGG	-	Chr1:96982164-96982183	None:intergenic	40.0%
	ATCAAGATTGGGGTGACCAA+AGG	-	Chr1:96981838-96981857	None:intergenic	45.0%
	CATAGACCGCTATCTTTCTC+TGG	+	Chr1:96981863-96981882	MsG0180005864.01.T01:CDS	45.0%
	CTAGTTGTATTCTCGCCTAG+TGG	+	Chr1:96981801-96981820	MsG0180005864.01.T01:CDS	45.0%
	CTGGATGCCGAGAAAAAGAT+TGG	+	Chr1:96981984-96982003	MsG0180005864.01.T01:CDS	45.0%
	CTGGTACCACCACAAAACAA+CGG	+	Chr1:96981882-96981901	MsG0180005864.01.T01:CDS	45.0%
	GACTCAAATCAACAACACGC+TGG	+	Chr1:96981965-96981984	MsG0180005864.01.T01:CDS	45.0%
	GAGCCATTTGCTCAAGGAAA+CGG	+	Chr1:96982016-96982035	MsG0180005864.01.T01:CDS	45.0%
	GAGGCTGCAATTGCAACATA+GGG	-	Chr1:96982262-96982281	None:intergenic	45.0%
	GTGGTACCAGAGAAAGATAG+CGG	-	Chr1:96981872-96981891	None:intergenic	45.0%
	GTTGAGCATTTGGCTGATGA+TGG	-	Chr1:96982205-96982224	None:intergenic	45.0%
	TCCCTATTCATCCCATCAAC+CGG	-	Chr1:96982065-96982084	None:intergenic	45.0%
	TGAGGCTGCAATTGCAACAT+AGG	-	Chr1:96982263-96982282	None:intergenic	45.0%
	TGGTCACCCCAATCTTGATA+CGG	+	Chr1:96981839-96981858	MsG0180005864.01.T01:CDS	45.0%
	TGTATTCTCGCCTAGTGGAA+AGG	+	Chr1:96981806-96981825	MsG0180005864.01.T01:CDS	45.0%
!	AGCATTGAGTTCACGAACGT+TGG	-	Chr1:96981940-96981959	None:intergenic	45.0%
!	AGGAAACGGAGGCTAAGTTT+TGG	+	Chr1:96982030-96982049	MsG0180005864.01.T01:CDS	45.0%
!!	AAACGGAGGCTAAGTTTTGG+TGG	+	Chr1:96982033-96982052	MsG0180005864.01.T01:CDS	45.0%
!!	AACGGAGGCTAAGTTTTGGT+GGG	+	Chr1:96982034-96982053	MsG0180005864.01.T01:CDS	45.0%
!!	ACTTTCTCAAAGCGCCGTAA+CGG	+	Chr1:96981726-96981745	MsG0180005864.01.T01:CDS	45.0%
!!	TCCGGTTGATGGGATGAATA+GGG	+	Chr1:96982061-96982080	MsG0180005864.01.T01:CDS	45.0%
!!!	TAAGTTTTGGTGGGCTTGTC+CGG	+	Chr1:96982043-96982062	MsG0180005864.01.T01:CDS	45.0%
	AGCAGCATCTGCACCACAAA+GGG	-	Chr1:96981781-96981800	None:intergenic	50.0%
	AGTGAGCTTTGCACCCTTTG+TGG	+	Chr1:96981765-96981784	MsG0180005864.01.T01:CDS	50.0%
	CCATTTGCTCAAGGAAACGG+AGG	+	Chr1:96982019-96982038	MsG0180005864.01.T01:CDS	50.0%
	CCTCCGTTTCCTTGAGCAAA+TGG	-	Chr1:96982022-96982041	None:intergenic	50.0%
	CCTTCTTGAAGAGCCCGTTA+CGG	-	Chr1:96981743-96981762	None:intergenic	50.0%
	GGATCAATGATGCCTCACCA+TGG	+	Chr1:96982293-96982312	MsG0180005864.01.T01:CDS	50.0%
	GTGAGCCTCAATGAGTTGCA+TGG	-	Chr1:96981910-96981929	None:intergenic	50.0%
	GTTCACGAACGTTGGCATTG+CGG	-	Chr1:96981932-96981951	None:intergenic	50.0%
	TGAGCTGAGCCATTTGCTCA+AGG	+	Chr1:96982010-96982029	MsG0180005864.01.T01:CDS	50.0%
!!	CTTTCTCAAAGCGCCGTAAC+GGG	+	Chr1:96981727-96981746	MsG0180005864.01.T01:CDS	50.0%
!!	GTCCGGTTGATGGGATGAAT+AGG	+	Chr1:96982060-96982079	MsG0180005864.01.T01:CDS	50.0%
!!!	ATGGTGCCGTTGTTTTGTGG+TGG	-	Chr1:96981891-96981910	None:intergenic	50.0%
!!!	TGCATGGTGCCGTTGTTTTG+TGG	-	Chr1:96981894-96981913	None:intergenic	50.0%
	CGGCACCATGCAACTCATTG+AGG	+	Chr1:96981902-96981921	MsG0180005864.01.T01:CDS	55.0%
	GAGCAGCATCTGCACCACAA+AGG	-	Chr1:96981782-96981801	None:intergenic	55.0%
!!	CCGTAACGGGCTCTTCAAGA+AGG	+	Chr1:96981740-96981759	MsG0180005864.01.T01:CDS	55.0%
!	GGTGGGCTTGTCCGGTTGAT+GGG	+	Chr1:96982051-96982070	MsG0180005864.01.T01:CDS	60.0%
!!	TGGTGGGCTTGTCCGGTTGA+TGG	+	Chr1:96982050-96982069	MsG0180005864.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	96981699	96982334	96981699	ID=MsG0180005864.01;Name=MsG0180005864.01
Chr1	mRNA	96981699	96982334	96981699	ID=MsG0180005864.01.T01;Parent=MsG0180005864.01;Name=MsG0180005864.01.T01;_AED=0.35;_eAED=0.35;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|211
Chr1	exon	96981699	96982334	96981699	ID=MsG0180005864.01.T01:exon:16268;Parent=MsG0180005864.01.T01
Chr1	CDS	96981699	96982334	96981699	ID=MsG0180005864.01.T01:cds;Parent=MsG0180005864.01.T01

Gene Sequence

>MsG0180005864.01.T01

ATGAGCAACGAGAGCAACTTGCAAGTTACTTTCTCAAAGCGCCGTAACGGGCTCTTCAAGAAGGTCAGTGAGCTTTGCACCCTTTGTGGTGCAGATGCTGCTCTAGTTGTATTCTCGCCTAGTGGAAAGGTATTTTCCTTTGGTCACCCCAATCTTGATACGGTCATAGACCGCTATCTTTCTCTGGTACCACCACAAAACAACGGCACCATGCAACTCATTGAGGCTCACCGCAATGCCAACGTTCGTGAACTCAATGCTCAGATGACTCAAATCAACAACACGCTGGATGCCGAGAAAAAGATTGGCGATGAGCTGAGCCATTTGCTCAAGGAAACGGAGGCTAAGTTTTGGTGGGCTTGTCCGGTTGATGGGATGAATAGGGATCAACTTGAATTATTCAAAAAGGCTTTGGAGGAGCTTAAGAAACTTGTAATTCAGCATGCTGCAACTCAAACTCATCCATTTTTTGTTGGCAACGCTTCTTCCTCGAACATTTATCTCCATCATCAGCCAAATGCTCAACAAGTTGAAATGTTGCCACCACAATTTTTTCAAAACCCTATGTTGCAATTGCAGCCTCATTTGTTTGATGGATCAATGATGCCTCACCATGGCTTCAATAATATGGTGTAA

Protein sequence

>MsG0180005864.01.T01

MSNESNLQVTFSKRRNGLFKKVSELCTLCGADAALVVFSPSGKVFSFGHPNLDTVIDRYLSLVPPQNNGTMQLIEAHRNANVRELNAQMTQINNTLDAEKKIGDELSHLLKETEAKFWWACPVDGMNRDQLELFKKALEELKKLVIQHAATQTHPFFVGNASSSNIYLHHQPNAQQVEMLPPQFFQNPMLQLQPHLFDGSMMPHHGFNNMV*