Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007119.01.T01 | AES64326.2 | 81.633 | 196 | 32 | 3 | 2 | 195 | 189 | 382 | 6.00E-107 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007119.01.T01 | Q9SU30 | 37.173 | 191 | 107 | 3 | 2 | 191 | 212 | 390 | 1.87E-30 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007119.01.T01 | G7IFQ1 | 81.633 | 196 | 32 | 3 | 2 | 195 | 189 | 382 | 2.87e-107 | 322 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0280007119.01 | MsG0480021164.01 | 0.804324 | 2.281722e-49 | 1.173010e-46 |
| MsG0280007119.01 | MsG0880046321.01 | 0.809284 | 2.041693e-50 | 1.193844e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007119.01.T01 | MTR_2g021050 | 81.633 | 196 | 32 | 3 | 2 | 195 | 189 | 382 | 7.27e-111 | 322 |
| MsG0280007119.01.T01 | MTR_2g425980 | 74.490 | 196 | 40 | 2 | 1 | 196 | 216 | 401 | 6.16e-94 | 280 |
| MsG0280007119.01.T01 | MTR_2g426020 | 66.829 | 205 | 43 | 4 | 1 | 198 | 217 | 403 | 2.42e-88 | 265 |
| MsG0280007119.01.T01 | MTR_2g028130 | 68.137 | 204 | 45 | 4 | 1 | 197 | 221 | 411 | 4.16e-87 | 262 |
| MsG0280007119.01.T01 | MTR_2g426060 | 70.312 | 192 | 46 | 3 | 1 | 192 | 217 | 397 | 2.71e-85 | 258 |
| MsG0280007119.01.T01 | MTR_2g031680 | 67.188 | 192 | 53 | 2 | 1 | 192 | 196 | 377 | 1.95e-83 | 252 |
| MsG0280007119.01.T01 | MTR_2g028110 | 68.020 | 197 | 42 | 4 | 1 | 197 | 206 | 381 | 2.79e-83 | 251 |
| MsG0280007119.01.T01 | MTR_2g426070 | 67.692 | 195 | 47 | 3 | 1 | 195 | 223 | 401 | 5.00e-83 | 251 |
| MsG0280007119.01.T01 | MTR_2g024100 | 68.020 | 197 | 48 | 4 | 1 | 190 | 212 | 400 | 6.11e-83 | 251 |
| MsG0280007119.01.T01 | MTR_2g031640 | 65.482 | 197 | 54 | 5 | 1 | 194 | 197 | 382 | 3.85e-80 | 244 |
| MsG0280007119.01.T01 | MTR_2g025420 | 66.667 | 198 | 51 | 4 | 1 | 192 | 224 | 412 | 1.85e-79 | 243 |
| MsG0280007119.01.T01 | MTR_0667s0010 | 64.322 | 199 | 53 | 3 | 1 | 192 | 210 | 397 | 6.35e-79 | 241 |
| MsG0280007119.01.T01 | MTR_2g426090 | 64.583 | 192 | 53 | 2 | 2 | 193 | 220 | 396 | 1.22e-76 | 236 |
| MsG0280007119.01.T01 | MTR_2g031720 | 63.265 | 196 | 58 | 4 | 1 | 192 | 199 | 384 | 3.00e-76 | 234 |
| MsG0280007119.01.T01 | MTR_2g025960 | 59.799 | 199 | 57 | 3 | 1 | 192 | 125 | 307 | 9.21e-76 | 230 |
| MsG0280007119.01.T01 | MTR_2g026010 | 64.532 | 203 | 49 | 5 | 1 | 192 | 196 | 386 | 1.31e-74 | 230 |
| MsG0280007119.01.T01 | MTR_8g099460 | 61.881 | 202 | 53 | 5 | 1 | 195 | 211 | 395 | 2.01e-74 | 229 |
| MsG0280007119.01.T01 | MTR_1g068875 | 64.583 | 192 | 50 | 4 | 2 | 193 | 198 | 371 | 2.65e-74 | 229 |
| MsG0280007119.01.T01 | MTR_3g083010 | 63.415 | 205 | 52 | 6 | 1 | 195 | 226 | 417 | 2.22e-73 | 227 |
| MsG0280007119.01.T01 | MTR_2g028140 | 62.887 | 194 | 58 | 3 | 1 | 192 | 225 | 406 | 2.98e-73 | 227 |
| MsG0280007119.01.T01 | MTR_1g068835 | 62.694 | 193 | 54 | 4 | 1 | 193 | 198 | 372 | 5.37e-72 | 223 |
| MsG0280007119.01.T01 | MTR_1g068860 | 62.944 | 197 | 53 | 5 | 1 | 197 | 200 | 376 | 8.16e-72 | 222 |
| MsG0280007119.01.T01 | MTR_2g028160 | 60.000 | 200 | 58 | 5 | 1 | 190 | 221 | 408 | 1.02e-68 | 216 |
| MsG0280007119.01.T01 | MTR_2g037520 | 65.409 | 159 | 40 | 2 | 1 | 152 | 1 | 151 | 8.41e-64 | 195 |
| MsG0280007119.01.T01 | MTR_4g070550 | 57.068 | 191 | 67 | 4 | 1 | 188 | 219 | 397 | 8.95e-61 | 194 |
| MsG0280007119.01.T01 | MTR_2g024110 | 55.556 | 189 | 58 | 5 | 1 | 178 | 197 | 370 | 1.12e-60 | 194 |
| MsG0280007119.01.T01 | MTR_2g025440 | 65.942 | 138 | 32 | 3 | 60 | 190 | 1 | 130 | 1.63e-54 | 173 |
| MsG0280007119.01.T01 | MTR_4g006270 | 47.716 | 197 | 70 | 5 | 1 | 178 | 176 | 358 | 2.46e-49 | 165 |
| MsG0280007119.01.T01 | MTR_4g133170 | 43.842 | 203 | 88 | 6 | 1 | 195 | 200 | 384 | 1.94e-41 | 144 |
| MsG0280007119.01.T01 | MTR_1g068905 | 48.223 | 197 | 36 | 6 | 2 | 198 | 182 | 312 | 1.54e-40 | 140 |
| MsG0280007119.01.T01 | MTR_7g110360 | 55.814 | 129 | 34 | 3 | 62 | 174 | 199 | 320 | 4.37e-35 | 126 |
| MsG0280007119.01.T01 | MTR_3g086960 | 48.447 | 161 | 54 | 6 | 24 | 173 | 9 | 151 | 8.99e-34 | 118 |
| MsG0280007119.01.T01 | MTR_7g110370 | 79.688 | 64 | 13 | 0 | 63 | 126 | 34 | 97 | 1.58e-29 | 109 |
| MsG0280007119.01.T01 | MTR_5g083940 | 39.869 | 153 | 55 | 4 | 1 | 147 | 153 | 274 | 2.00e-22 | 92.8 |
| MsG0280007119.01.T01 | MTR_2g031700 | 67.143 | 70 | 15 | 2 | 127 | 196 | 232 | 293 | 3.36e-20 | 86.3 |
| MsG0280007119.01.T01 | MTR_2g028120 | 57.500 | 80 | 25 | 3 | 114 | 192 | 7 | 78 | 5.33e-20 | 80.5 |
| MsG0280007119.01.T01 | MTR_2g040050 | 43.802 | 121 | 34 | 4 | 2 | 117 | 150 | 241 | 1.96e-19 | 83.6 |
| MsG0280007119.01.T01 | MTR_3g014570 | 30.114 | 176 | 95 | 5 | 2 | 173 | 229 | 380 | 4.09e-16 | 75.9 |
| MsG0280007119.01.T01 | MTR_3g036290 | 31.250 | 176 | 92 | 4 | 2 | 174 | 210 | 359 | 5.41e-15 | 72.4 |
| MsG0280007119.01.T01 | MTR_3g006670 | 30.601 | 183 | 91 | 7 | 2 | 172 | 252 | 410 | 2.77e-14 | 70.9 |
| MsG0280007119.01.T01 | MTR_3g024130 | 28.736 | 174 | 97 | 4 | 2 | 172 | 166 | 315 | 3.60e-14 | 70.1 |
| MsG0280007119.01.T01 | MTR_3g436150 | 37.302 | 126 | 67 | 4 | 4 | 128 | 244 | 358 | 4.11e-14 | 70.1 |
| MsG0280007119.01.T01 | MTR_2g046900 | 31.461 | 178 | 99 | 7 | 1 | 174 | 229 | 387 | 4.51e-14 | 70.1 |
| MsG0280007119.01.T01 | MTR_8g054320 | 31.429 | 175 | 90 | 7 | 2 | 172 | 153 | 301 | 6.83e-14 | 68.9 |
| MsG0280007119.01.T01 | MTR_3g014540 | 31.818 | 176 | 90 | 8 | 2 | 173 | 230 | 379 | 8.17e-14 | 69.3 |
| MsG0280007119.01.T01 | MTR_3g010390 | 32.022 | 178 | 93 | 8 | 2 | 172 | 242 | 398 | 1.07e-13 | 68.9 |
| MsG0280007119.01.T01 | MTR_2g021150 | 33.721 | 172 | 96 | 6 | 2 | 172 | 215 | 369 | 1.60e-13 | 68.6 |
| MsG0280007119.01.T01 | MTR_6g021880 | 31.977 | 172 | 101 | 8 | 1 | 172 | 227 | 382 | 6.53e-13 | 66.6 |
| MsG0280007119.01.T01 | MTR_7g407070 | 31.792 | 173 | 97 | 6 | 2 | 172 | 246 | 399 | 1.50e-12 | 65.5 |
| MsG0280007119.01.T01 | MTR_3g009300 | 30.508 | 177 | 96 | 8 | 2 | 174 | 202 | 355 | 2.37e-12 | 65.1 |
| MsG0280007119.01.T01 | MTR_2g046830 | 31.250 | 160 | 92 | 6 | 2 | 155 | 220 | 367 | 3.24e-12 | 64.7 |
| MsG0280007119.01.T01 | MTR_3g011100 | 32.065 | 184 | 90 | 9 | 2 | 172 | 441 | 602 | 6.51e-12 | 63.9 |
| MsG0280007119.01.T01 | MTR_3g007330 | 27.869 | 183 | 93 | 6 | 1 | 174 | 243 | 395 | 1.59e-11 | 62.8 |
| MsG0280007119.01.T01 | MTR_3g011020 | 40.404 | 99 | 46 | 4 | 2 | 100 | 220 | 305 | 1.95e-11 | 62.4 |
| MsG0280007119.01.T01 | MTR_3g009310 | 31.073 | 177 | 88 | 9 | 2 | 172 | 243 | 391 | 2.43e-11 | 62.0 |
| MsG0280007119.01.T01 | MTR_2g029990 | 30.286 | 175 | 98 | 9 | 2 | 172 | 249 | 403 | 3.51e-11 | 61.6 |
| MsG0280007119.01.T01 | MTR_3g006640 | 33.333 | 147 | 81 | 6 | 2 | 141 | 131 | 267 | 3.59e-11 | 61.2 |
| MsG0280007119.01.T01 | MTR_2g046920 | 30.556 | 180 | 94 | 8 | 2 | 174 | 220 | 375 | 4.29e-11 | 61.2 |
| MsG0280007119.01.T01 | MTR_3g030240 | 31.250 | 176 | 90 | 8 | 2 | 172 | 229 | 378 | 5.37e-11 | 61.2 |
| MsG0280007119.01.T01 | MTR_3g013770 | 30.508 | 177 | 92 | 8 | 2 | 173 | 239 | 389 | 5.44e-11 | 61.2 |
| MsG0280007119.01.T01 | MTR_5g056990 | 36.893 | 103 | 44 | 4 | 2 | 100 | 90 | 175 | 9.17e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007119.01.T01 | AT4G12560 | 37.173 | 191 | 107 | 3 | 2 | 191 | 212 | 390 | 1.91e-31 | 118 |
| MsG0280007119.01.T01 | AT4G12560 | 37.173 | 191 | 107 | 3 | 2 | 191 | 212 | 390 | 1.91e-31 | 118 |
| MsG0280007119.01.T01 | AT4G12560 | 37.173 | 191 | 107 | 3 | 2 | 191 | 212 | 390 | 1.91e-31 | 118 |
| MsG0280007119.01.T01 | AT4G22390 | 33.333 | 144 | 85 | 2 | 2 | 144 | 211 | 344 | 9.39e-18 | 80.5 |
| MsG0280007119.01.T01 | AT4G22390 | 33.333 | 144 | 85 | 2 | 2 | 144 | 211 | 344 | 9.52e-18 | 80.5 |
Find 35 sgRNAs with CRISPR-Local
Find 42 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAATCCTTCATTCAAATT+AGG | 0.210119 | 2:-10886824 | None:intergenic |
| AGAACTTTCTGTTGCTGTTT+TGG | 0.229110 | 2:+10886517 | MsG0280007119.01.T01:CDS |
| TTGATTTCTGTGAGGCCTTT+AGG | 0.240446 | 2:+10886701 | MsG0280007119.01.T01:CDS |
| GTTCCTCTTCCTGATGAAAT+TGG | 0.265276 | 2:+10886488 | MsG0280007119.01.T01:CDS |
| AAACTACTAAAATAGATGTT+TGG | 0.316493 | 2:+10886603 | MsG0280007119.01.T01:CDS |
| TTATTCTAGTGATGGAAATA+AGG | 0.337869 | 2:+10886724 | MsG0280007119.01.T01:CDS |
| CCTTCCATGTTGATAATTGT+AGG | 0.350854 | 2:+10886894 | MsG0280007119.01.T01:CDS |
| ATCATAGCTCCATTCATATT+AGG | 0.353494 | 2:-10886845 | None:intergenic |
| AACTACTAAAATAGATGTTT+GGG | 0.360391 | 2:+10886604 | MsG0280007119.01.T01:CDS |
| TGATGGAAATAAGGTTCTAT+TGG | 0.379061 | 2:+10886733 | MsG0280007119.01.T01:CDS |
| CAATGAAAATCTCAAGTGTT+AGG | 0.392998 | 2:-10886463 | None:intergenic |
| GAACAAGTTAGTTGTGTTGA+AGG | 0.395270 | 2:+10886797 | MsG0280007119.01.T01:CDS |
| GTTTGGGTGATGAAAGAATA+TGG | 0.400967 | 2:+10886620 | MsG0280007119.01.T01:CDS |
| GGAATTCCTAATTTGAATGA+AGG | 0.405039 | 2:+10886818 | MsG0280007119.01.T01:CDS |
| GGAAATAGATTGTATGAAGC+TGG | 0.412006 | 2:+10886754 | MsG0280007119.01.T01:CDS |
| TAGATTGTATGAAGCTGGTT+TGG | 0.428185 | 2:+10886759 | MsG0280007119.01.T01:CDS |
| TTGTTGAGAATTCTCTTCAC+TGG | 0.446412 | 2:+10886387 | MsG0280007119.01.T01:CDS |
| TCTTCACCTCCAATTTCATC+AGG | 0.451712 | 2:-10886497 | None:intergenic |
| GAAGGATTTCCTAATATGAA+TGG | 0.487943 | 2:+10886836 | MsG0280007119.01.T01:CDS |
| CCTTTAGGTTATTCTAGTGA+TGG | 0.497547 | 2:+10886716 | MsG0280007119.01.T01:CDS |
| CTCTTCACTGGATAATGTCT+CGG | 0.505952 | 2:+10886399 | MsG0280007119.01.T01:CDS |
| CCTCTTCCTGATGAAATTGG+AGG | 0.507562 | 2:+10886491 | MsG0280007119.01.T01:CDS |
| CCTCCAATTTCATCAGGAAG+AGG | 0.533158 | 2:-10886491 | None:intergenic |
| TGTTGATAATTGTAGGAAGA+AGG | 0.538310 | 2:+10886901 | MsG0280007119.01.T01:CDS |
| CCATCACTAGAATAACCTAA+AGG | 0.581490 | 2:-10886716 | None:intergenic |
| AATATGGATCTAGAGATAGT+TGG | 0.584921 | 2:+10886636 | MsG0280007119.01.T01:CDS |
| CATGGAAGGAAGGTGGCACA+AGG | 0.595998 | 2:-10886880 | None:intergenic |
| CCTACAATTATCAACATGGA+AGG | 0.602007 | 2:-10886894 | None:intergenic |
| TCTTCCTACAATTATCAACA+TGG | 0.612083 | 2:-10886898 | None:intergenic |
| CAATTATCAACATGGAAGGA+AGG | 0.619789 | 2:-10886890 | None:intergenic |
| ATACAAGCAAGAGCAAGAGA+AGG | 0.632854 | 2:+10886930 | MsG0280007119.01.T01:CDS |
| ATTTATCTTTGATTTCTGTG+AGG | 0.634434 | 2:+10886693 | MsG0280007119.01.T01:CDS |
| TTAAACGCGACAATTAAACA+AGG | 0.677389 | 2:-10886440 | None:intergenic |
| TTATCAACATGGAAGGAAGG+TGG | 0.689140 | 2:-10886887 | None:intergenic |
| TAAACGCGACAATTAAACAA+GGG | 0.729501 | 2:-10886439 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTACTAAAATAGATGTT+TGG | + | Chr2:10886603-10886622 | MsG0280007119.01.T01:CDS | 20.0% |
| !! | AACTACTAAAATAGATGTTT+GGG | + | Chr2:10886604-10886623 | MsG0280007119.01.T01:CDS | 20.0% |
| !! | ATTTATCTTTGATTTCTGTG+AGG | + | Chr2:10886693-10886712 | MsG0280007119.01.T01:CDS | 25.0% |
| !! | TTATTCTAGTGATGGAAATA+AGG | + | Chr2:10886724-10886743 | MsG0280007119.01.T01:CDS | 25.0% |
| AATATGGATCTAGAGATAGT+TGG | + | Chr2:10886636-10886655 | MsG0280007119.01.T01:CDS | 30.0% | |
| ATCATAGCTCCATTCATATT+AGG | - | Chr2:10886848-10886867 | None:intergenic | 30.0% | |
| CAATGAAAATCTCAAGTGTT+AGG | - | Chr2:10886466-10886485 | None:intergenic | 30.0% | |
| GAAGGATTTCCTAATATGAA+TGG | + | Chr2:10886836-10886855 | MsG0280007119.01.T01:CDS | 30.0% | |
| GGAAATCCTTCATTCAAATT+AGG | - | Chr2:10886827-10886846 | None:intergenic | 30.0% | |
| GGAATTCCTAATTTGAATGA+AGG | + | Chr2:10886818-10886837 | MsG0280007119.01.T01:CDS | 30.0% | |
| TAAACGCGACAATTAAACAA+GGG | - | Chr2:10886442-10886461 | None:intergenic | 30.0% | |
| TCTTCCTACAATTATCAACA+TGG | - | Chr2:10886901-10886920 | None:intergenic | 30.0% | |
| TGATGGAAATAAGGTTCTAT+TGG | + | Chr2:10886733-10886752 | MsG0280007119.01.T01:CDS | 30.0% | |
| TTAAACGCGACAATTAAACA+AGG | - | Chr2:10886443-10886462 | None:intergenic | 30.0% | |
| ! | AACACTTGAGATTTTCATTG+AGG | + | Chr2:10886466-10886485 | MsG0280007119.01.T01:CDS | 30.0% |
| ! | TTGGTGTAAACTTTTTACGA+TGG | + | Chr2:10886655-10886674 | MsG0280007119.01.T01:CDS | 30.0% |
| !! | TGTTGATAATTGTAGGAAGA+AGG | + | Chr2:10886901-10886920 | MsG0280007119.01.T01:CDS | 30.0% |
| !!! | ACACTTTTTGTTGCTGTTTT+GGG | + | Chr2:10886551-10886570 | MsG0280007119.01.T01:CDS | 30.0% |
| !!! | TACACTTTTTGTTGCTGTTT+TGG | + | Chr2:10886550-10886569 | MsG0280007119.01.T01:CDS | 30.0% |
| CAATTATCAACATGGAAGGA+AGG | - | Chr2:10886893-10886912 | None:intergenic | 35.0% | |
| CCATCACTAGAATAACCTAA+AGG | - | Chr2:10886719-10886738 | None:intergenic | 35.0% | |
| CCTACAATTATCAACATGGA+AGG | - | Chr2:10886897-10886916 | None:intergenic | 35.0% | |
| GAACAAGTTAGTTGTGTTGA+AGG | + | Chr2:10886797-10886816 | MsG0280007119.01.T01:CDS | 35.0% | |
| GGAAATAGATTGTATGAAGC+TGG | + | Chr2:10886754-10886773 | MsG0280007119.01.T01:CDS | 35.0% | |
| GTTTGGGTGATGAAAGAATA+TGG | + | Chr2:10886620-10886639 | MsG0280007119.01.T01:CDS | 35.0% | |
| TAGATTGTATGAAGCTGGTT+TGG | + | Chr2:10886759-10886778 | MsG0280007119.01.T01:CDS | 35.0% | |
| TTGTTGAGAATTCTCTTCAC+TGG | + | Chr2:10886387-10886406 | MsG0280007119.01.T01:CDS | 35.0% | |
| ! | CCTTTAGGTTATTCTAGTGA+TGG | + | Chr2:10886716-10886735 | MsG0280007119.01.T01:CDS | 35.0% |
| !! | CCTTCCATGTTGATAATTGT+AGG | + | Chr2:10886894-10886913 | MsG0280007119.01.T01:CDS | 35.0% |
| !!! | AGAACTTTCTGTTGCTGTTT+TGG | + | Chr2:10886517-10886536 | MsG0280007119.01.T01:CDS | 35.0% |
| !!! | GAACTTTCTGTTGCTGTTTT+GGG | + | Chr2:10886518-10886537 | MsG0280007119.01.T01:CDS | 35.0% |
| !!! | TTTTTGTTGCTGTTTTGGGA+GGG | + | Chr2:10886555-10886574 | MsG0280007119.01.T01:CDS | 35.0% |
| ATACAAGCAAGAGCAAGAGA+AGG | + | Chr2:10886930-10886949 | MsG0280007119.01.T01:CDS | 40.0% | |
| CTCTTCACTGGATAATGTCT+CGG | + | Chr2:10886399-10886418 | MsG0280007119.01.T01:CDS | 40.0% | |
| GTTCCTCTTCCTGATGAAAT+TGG | + | Chr2:10886488-10886507 | MsG0280007119.01.T01:CDS | 40.0% | |
| TCTTCACCTCCAATTTCATC+AGG | - | Chr2:10886500-10886519 | None:intergenic | 40.0% | |
| TTATCAACATGGAAGGAAGG+TGG | - | Chr2:10886890-10886909 | None:intergenic | 40.0% | |
| TTGATTTCTGTGAGGCCTTT+AGG | + | Chr2:10886701-10886720 | MsG0280007119.01.T01:CDS | 40.0% | |
| !!! | CTTTTTGTTGCTGTTTTGGG+AGG | + | Chr2:10886554-10886573 | MsG0280007119.01.T01:CDS | 40.0% |
| CCTCCAATTTCATCAGGAAG+AGG | - | Chr2:10886494-10886513 | None:intergenic | 45.0% | |
| CCTCTTCCTGATGAAATTGG+AGG | + | Chr2:10886491-10886510 | MsG0280007119.01.T01:CDS | 45.0% | |
| CATGGAAGGAAGGTGGCACA+AGG | - | Chr2:10886883-10886902 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 10886377 | 10886973 | 10886377 | ID=MsG0280007119.01;Name=MsG0280007119.01 |
| Chr2 | mRNA | 10886377 | 10886973 | 10886377 | ID=MsG0280007119.01.T01;Parent=MsG0280007119.01;Name=MsG0280007119.01.T01;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|198 |
| Chr2 | exon | 10886377 | 10886973 | 10886377 | ID=MsG0280007119.01.T01:exon:2577;Parent=MsG0280007119.01.T01 |
| Chr2 | CDS | 10886377 | 10886973 | 10886377 | ID=MsG0280007119.01.T01:cds;Parent=MsG0280007119.01.T01 |
| Gene Sequence |
| Protein sequence |
