AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007127.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007127.01.T01 MTR_2g021155 82.927 205 31 1 2 206 168 368 4.59e-114 352
MsG0280007127.01.T01 MTR_2g021155 52.174 207 90 3 4 206 736 937 8.65e-54 189
MsG0280007127.01.T01 MTR_2g021155 92.857 70 5 0 201 270 456 525 1.30e-34 134
MsG0280007127.01.T01 MTR_2g021190 55.882 204 78 6 2 202 156 350 3.92e-65 210
MsG0280007127.01.T01 MTR_2g029990 52.427 206 84 7 2 204 188 382 3.61e-53 180
MsG0280007127.01.T01 MTR_7g407070 47.143 210 98 8 5 206 181 385 5.27e-46 161
MsG0280007127.01.T01 MTR_2g021210 50.490 204 86 7 5 206 216 406 2.00e-45 160
MsG0280007127.01.T01 MTR_3g024130 45.771 201 96 5 7 202 105 297 3.16e-45 157
MsG0280007127.01.T01 MTR_3g006640 42.601 223 100 8 7 206 57 274 4.08e-45 155
MsG0280007127.01.T01 MTR_3g014540 47.000 200 95 5 7 202 168 360 7.17e-45 157
MsG0280007127.01.T01 MTR_2g435950 45.455 198 99 4 7 204 92 280 3.10e-44 154
MsG0280007127.01.T01 MTR_4g055060 44.091 220 110 5 7 221 176 387 4.19e-44 155
MsG0280007127.01.T01 MTR_3g006670 43.541 209 96 5 7 201 191 391 5.55e-44 156
MsG0280007127.01.T01 MTR_3g010390 48.039 204 94 6 7 202 181 380 6.16e-44 155
MsG0280007127.01.T01 MTR_3g011020 43.396 212 103 7 7 209 157 360 7.43e-44 154
MsG0280007127.01.T01 MTR_2g021252 46.890 209 82 9 7 210 187 371 4.48e-43 153
MsG0280007127.01.T01 MTR_3g007410 45.146 206 97 7 3 202 190 385 6.47e-42 150
MsG0280007127.01.T01 MTR_3g007390 42.727 220 106 7 6 221 1 204 8.24e-42 144
MsG0280007127.01.T01 MTR_2g078850 43.541 209 92 9 4 202 169 361 8.79e-42 149
MsG0280007127.01.T01 MTR_3g009240 44.878 205 92 7 6 202 174 365 1.73e-41 149
MsG0280007127.01.T01 MTR_3g007360 44.660 206 98 7 3 202 190 385 4.31e-41 148
MsG0280007127.01.T01 MTR_3g011060 45.411 207 97 9 7 206 176 373 8.77e-41 147
MsG0280007127.01.T01 MTR_3g007430 42.273 220 107 6 6 221 184 387 9.04e-41 147
MsG0280007127.01.T01 MTR_3g006570 42.927 205 99 5 5 202 161 354 1.62e-40 146
MsG0280007127.01.T01 MTR_3g009260 43.204 206 92 8 6 202 178 367 4.07e-40 145
MsG0280007127.01.T01 MTR_2g078870 43.269 208 90 7 4 202 97 285 4.70e-40 143
MsG0280007127.01.T01 MTR_6g027910 44.156 231 99 10 4 221 162 375 4.85e-40 144
MsG0280007127.01.T01 MTR_3g036290 41.935 217 104 7 7 221 161 357 1.53e-39 143
MsG0280007127.01.T01 MTR_3g013770 45.631 206 98 5 7 206 177 374 1.71e-39 143
MsG0280007127.01.T01 MTR_3g009300 41.463 205 98 6 6 202 145 335 2.20e-39 142
MsG0280007127.01.T01 MTR_3g007270 40.594 202 106 5 5 202 199 390 2.22e-39 144
MsG0280007127.01.T01 MTR_3g036335 41.905 210 99 7 5 207 187 380 2.28e-39 143
MsG0280007127.01.T01 MTR_3g030240 42.289 201 79 7 8 201 184 354 2.68e-39 142
MsG0280007127.01.T01 MTR_3g007330 41.518 224 115 7 3 221 181 393 4.39e-39 142
MsG0280007127.01.T01 MTR_6g053240 38.710 217 113 4 5 211 176 382 5.81e-39 142
MsG0280007127.01.T01 MTR_3g083660 38.053 226 108 8 6 220 76 280 1.13e-38 139
MsG0280007127.01.T01 MTR_0044s0300 41.905 210 90 8 4 202 179 367 1.60e-38 141
MsG0280007127.01.T01 MTR_2g078900 43.784 185 87 5 4 187 172 340 4.59e-38 139
MsG0280007127.01.T01 MTR_6g027890 43.056 216 94 9 4 206 110 309 9.39e-38 137
MsG0280007127.01.T01 MTR_6g053260 40.092 217 110 5 5 211 480 686 1.05e-37 142
MsG0280007127.01.T01 MTR_2g021150 37.991 229 121 10 2 221 153 369 1.86e-37 137
MsG0280007127.01.T01 MTR_6g007150 40.094 212 107 6 5 206 117 318 2.50e-37 136
MsG0280007127.01.T01 MTR_6g021880 43.902 205 105 7 5 206 165 362 6.08e-37 136
MsG0280007127.01.T01 MTR_3g014570 47.059 204 90 7 7 202 168 361 6.67e-37 136
MsG0280007127.01.T01 MTR_6g065980 41.509 212 95 8 5 208 150 340 1.21e-36 135
MsG0280007127.01.T01 MTR_7g013590 36.864 236 142 3 5 237 172 403 1.28e-36 136
MsG0280007127.01.T01 MTR_3g030320 41.667 204 91 9 7 201 90 274 1.46e-36 134
MsG0280007127.01.T01 MTR_3g036430 40.594 202 96 7 5 201 137 319 1.92e-36 134
MsG0280007127.01.T01 MTR_1g114650 41.791 201 86 8 11 202 24 202 3.50e-36 130
MsG0280007127.01.T01 MTR_4g061340 39.394 231 110 7 3 221 164 376 3.79e-36 134
MsG0280007127.01.T01 MTR_6g048120 42.857 203 94 9 6 202 190 376 4.26e-36 135
MsG0280007127.01.T01 MTR_2g046860 40.394 203 101 7 5 199 53 243 2.30e-35 131
MsG0280007127.01.T01 MTR_3g436150 44.608 204 95 10 5 200 180 373 2.31e-35 132
MsG0280007127.01.T01 MTR_3g023930 42.000 200 83 6 8 201 172 344 6.38e-35 130
MsG0280007127.01.T01 MTR_1g112930 39.604 202 99 5 5 202 168 350 9.69e-35 130
MsG0280007127.01.T01 MTR_3g013740 40.299 201 110 4 7 202 194 389 1.60e-34 130
MsG0280007127.01.T01 MTR_1g113900 39.409 203 100 7 5 202 39 223 1.85e-34 126
MsG0280007127.01.T01 MTR_2g046900 40.291 206 100 9 5 199 169 362 2.30e-34 129
MsG0280007127.01.T01 MTR_5g011200 40.887 203 106 5 5 202 160 353 2.85e-34 129
MsG0280007127.01.T01 MTR_3g030250 40.000 200 90 6 8 201 181 356 3.28e-34 129
MsG0280007127.01.T01 MTR_6g048140 40.291 206 92 8 6 202 195 378 4.22e-34 129
MsG0280007127.01.T01 MTR_5g007610 42.308 208 100 7 5 202 186 383 4.22e-34 129
MsG0280007127.01.T01 MTR_3g009310 40.196 204 105 4 3 202 183 373 6.42e-34 129
MsG0280007127.01.T01 MTR_3g006500 40.594 202 88 7 8 201 169 346 1.37e-33 127
MsG0280007127.01.T01 MTR_1g054725 38.865 229 120 9 4 221 157 376 1.37e-33 127
MsG0280007127.01.T01 MTR_3g083640 41.294 201 95 8 6 202 199 380 1.69e-33 127
MsG0280007127.01.T01 MTR_3g006530 39.801 201 98 7 5 201 192 373 2.42e-33 127
MsG0280007127.01.T01 MTR_7g067680 48.295 176 72 5 32 206 199 356 3.88e-33 126
MsG0280007127.01.T01 MTR_5g057790 41.827 208 88 9 6 202 189 374 3.96e-33 126
MsG0280007127.01.T01 MTR_5g009060 42.365 203 100 8 7 202 189 381 4.07e-33 126
MsG0280007127.01.T01 MTR_3g011100 41.981 212 94 10 7 202 380 578 5.59e-33 129
MsG0280007127.01.T01 MTR_5g057690 42.029 207 100 8 3 202 171 364 6.16e-33 125
MsG0280007127.01.T01 MTR_6g004210 39.713 209 112 7 7 203 177 383 7.60e-33 126
MsG0280007127.01.T01 MTR_1004s0010 39.706 204 92 10 7 202 157 337 1.54e-32 124
MsG0280007127.01.T01 MTR_3g010970 39.614 207 88 7 4 201 190 368 1.67e-32 125
MsG0280007127.01.T01 MTR_4g031770 38.288 222 111 8 8 209 138 353 1.81e-32 124
MsG0280007127.01.T01 MTR_3g010430 39.819 221 84 8 5 202 176 370 1.83e-32 125
MsG0280007127.01.T01 MTR_3g010870 39.810 211 95 9 8 209 182 369 2.36e-32 124
MsG0280007127.01.T01 MTR_3g024110 37.981 208 101 7 3 202 238 425 2.55e-32 125
MsG0280007127.01.T01 MTR_6g007135 40.594 202 103 6 5 198 172 364 3.01e-32 124
MsG0280007127.01.T01 MTR_3g010920 38.119 202 91 6 8 201 183 358 3.68e-32 124
MsG0280007127.01.T01 MTR_3g030310 37.674 215 95 8 5 201 174 367 6.65e-32 123
MsG0280007127.01.T01 MTR_3g010520 41.206 199 85 8 8 200 163 335 8.25e-32 122
MsG0280007127.01.T01 MTR_3g024150 41.294 201 90 9 8 200 181 361 1.04e-31 122
MsG0280007127.01.T01 MTR_5g056990 40.777 206 98 9 4 202 32 220 1.51e-31 119
MsG0280007127.01.T01 MTR_3g030330 37.391 230 108 10 8 221 163 372 1.57e-31 122
MsG0280007127.01.T01 MTR_5g057710 41.262 206 97 9 4 202 187 375 2.25e-31 122
MsG0280007127.01.T01 MTR_0760s0010 39.216 204 93 10 7 202 187 367 2.64e-31 121
MsG0280007127.01.T01 MTR_3g030350 40.654 214 101 9 4 206 172 370 4.24e-31 121
MsG0280007127.01.T01 MTR_2g046920 37.931 203 101 7 5 199 165 350 4.58e-31 120
MsG0280007127.01.T01 MTR_3g023940 40.099 202 97 8 6 201 177 360 9.04e-31 120
MsG0280007127.01.T01 MTR_3g024040 40.000 205 101 7 4 201 162 351 1.01e-30 119
MsG0280007127.01.T01 MTR_1g055375 38.208 212 118 6 4 209 147 351 1.42e-30 119
MsG0280007127.01.T01 MTR_3g010590 38.164 207 89 7 8 201 182 362 2.45e-30 119
MsG0280007127.01.T01 MTR_1g115160 37.561 205 103 8 6 202 157 344 2.74e-30 118
MsG0280007127.01.T01 MTR_1g114700 39.713 209 102 7 5 206 178 369 3.66e-30 118
MsG0280007127.01.T01 MTR_2g047832 35.616 219 108 8 4 199 167 375 9.49e-30 117
MsG0280007127.01.T01 MTR_2g046830 37.500 200 102 6 4 195 163 347 1.98e-29 116
MsG0280007127.01.T01 MTR_3g010620 37.104 221 89 10 4 201 176 369 2.20e-29 116
MsG0280007127.01.T01 MTR_7g007300 39.234 209 95 8 5 206 245 428 2.48e-29 117
MsG0280007127.01.T01 MTR_1g056280 37.500 216 109 8 16 211 2 211 8.23e-29 110
MsG0280007127.01.T01 MTR_1g097330 39.196 199 105 7 7 199 152 340 9.10e-29 115
MsG0280007127.01.T01 MTR_1g058190 36.481 233 110 8 5 213 147 365 1.08e-28 114
MsG0280007127.01.T01 MTR_1g055065 37.991 229 120 10 7 221 68 288 3.49e-28 111
MsG0280007127.01.T01 MTR_5g046300 38.053 226 111 12 7 221 144 351 3.83e-28 112
MsG0280007127.01.T01 MTR_5g046290 38.053 226 111 12 7 221 144 351 3.83e-28 112
MsG0280007127.01.T01 MTR_3g007300 38.710 217 106 9 13 221 170 367 5.54e-28 112
MsG0280007127.01.T01 MTR_5g046280 37.611 226 112 12 7 221 47 254 6.36e-28 109
MsG0280007127.01.T01 MTR_8g054320 36.530 219 116 7 6 221 103 301 6.54e-28 110
MsG0280007127.01.T01 MTR_3g058470 38.308 201 81 6 7 203 189 350 7.48e-28 112
MsG0280007127.01.T01 MTR_1g050542 40.299 201 102 8 5 199 190 378 8.13e-28 112
MsG0280007127.01.T01 MTR_4g132560 35.556 225 112 11 10 215 41 251 9.96e-28 109
MsG0280007127.01.T01 MTR_6g014720 36.408 206 111 8 3 202 155 346 2.40e-27 110
MsG0280007127.01.T01 MTR_6g013270 37.321 209 106 8 3 202 172 364 3.16e-27 110
MsG0280007127.01.T01 MTR_3g010870 42.857 168 75 8 46 204 141 296 4.50e-27 108
MsG0280007127.01.T01 MTR_1g056710 37.799 209 113 8 5 204 169 369 9.31e-27 109
MsG0280007127.01.T01 MTR_3g010440 40.625 160 77 6 53 202 154 305 1.28e-26 107
MsG0280007127.01.T01 MTR_6g004660 35.323 201 117 4 6 202 166 357 2.09e-26 108
MsG0280007127.01.T01 MTR_4g108820 42.500 160 71 6 7 163 151 292 4.40e-26 105
MsG0280007127.01.T01 MTR_8g101580 37.864 206 100 9 5 199 182 370 6.30e-26 107
MsG0280007127.01.T01 MTR_2g046800 38.235 204 115 5 8 210 185 378 7.44e-26 106
MsG0280007127.01.T01 MTR_3g096280 36.098 205 85 7 6 202 154 320 1.25e-25 105
MsG0280007127.01.T01 MTR_5g057020 41.765 170 73 8 3 165 171 321 2.94e-25 104
MsG0280007127.01.T01 MTR_1g097370 36.453 203 106 8 8 195 135 329 4.62e-25 105
MsG0280007127.01.T01 MTR_1g097560 32.719 217 121 6 7 219 175 370 7.86e-25 103
MsG0280007127.01.T01 MTR_1g115185 37.056 197 104 6 11 202 191 372 9.12e-25 103
MsG0280007127.01.T01 MTR_1g055055 44.118 170 72 10 37 197 180 335 1.71e-24 102
MsG0280007127.01.T01 MTR_4g133170 32.804 189 113 5 6 190 142 320 6.90e-24 101
MsG0280007127.01.T01 MTR_5g022420 33.476 233 114 11 7 231 161 360 7.75e-24 100
MsG0280007127.01.T01 MTR_1g054575 38.798 183 96 7 3 181 185 355 1.42e-23 101
MsG0280007127.01.T01 MTR_3g013950 31.818 220 128 7 7 211 161 373 2.00e-23 100
MsG0280007127.01.T01 MTR_1g097490 38.144 194 104 6 7 199 188 366 2.96e-23 99.4
MsG0280007127.01.T01 MTR_7g498320 38.710 155 72 6 48 194 74 213 5.86e-23 95.5
MsG0280007127.01.T01 MTR_0015s0100 35.938 192 80 7 22 206 84 239 9.60e-23 95.9
MsG0280007127.01.T01 MTR_2g055970 37.156 218 107 10 5 208 347 548 9.87e-23 99.4
MsG0280007127.01.T01 MTR_0267s0050 31.222 221 128 7 7 211 159 371 1.18e-22 97.8
MsG0280007127.01.T01 MTR_6g088385 31.818 220 119 10 6 200 81 294 2.65e-22 95.9
MsG0280007127.01.T01 MTR_4g107820 36.869 198 95 8 8 195 178 355 3.39e-22 96.3
MsG0280007127.01.T01 MTR_4g107780 36.869 198 95 8 8 195 178 355 3.39e-22 96.3
MsG0280007127.01.T01 MTR_1g055070 35.577 208 90 6 4 202 199 371 3.46e-22 96.3
MsG0280007127.01.T01 MTR_4g107820 36.869 198 95 8 8 195 178 355 4.36e-22 96.3
MsG0280007127.01.T01 MTR_4g107780 36.869 198 95 8 8 195 178 355 4.90e-22 96.3
MsG0280007127.01.T01 MTR_2g031640 30.213 235 134 8 5 221 138 360 5.59e-22 95.9
MsG0280007127.01.T01 MTR_5g046260 35.922 206 77 10 7 208 129 283 8.06e-22 94.0
MsG0280007127.01.T01 MTR_7g070440 35.385 195 112 8 5 190 147 336 1.12e-21 94.7
MsG0280007127.01.T01 MTR_6g016285 30.932 236 127 9 7 208 168 401 1.51e-21 95.1
MsG0280007127.01.T01 MTR_1g094210 34.826 201 106 9 7 201 195 376 4.01e-21 93.6
MsG0280007127.01.T01 MTR_3g080370 32.743 226 116 10 7 198 168 391 4.48e-21 94.0
MsG0280007127.01.T01 MTR_7g056820 33.491 212 122 8 8 206 153 358 4.73e-21 93.2
MsG0280007127.01.T01 MTR_6g055210 29.661 236 131 8 7 208 169 403 5.59e-21 93.6
MsG0280007127.01.T01 MTR_1g100763 39.884 173 86 8 34 198 135 297 1.04e-20 90.9
MsG0280007127.01.T01 MTR_4g037465 32.727 220 126 9 8 211 168 381 1.08e-20 92.4
MsG0280007127.01.T01 MTR_3g011660 45.872 109 48 3 101 202 4 108 1.48e-20 86.3
MsG0280007127.01.T01 MTR_1g097510 40.854 164 84 8 43 199 91 248 1.59e-20 90.1
MsG0280007127.01.T01 MTR_2g006360 32.353 204 106 6 7 200 156 337 2.27e-20 90.9
MsG0280007127.01.T01 MTR_7g066100 31.797 217 125 7 7 207 166 375 2.49e-20 91.3
MsG0280007127.01.T01 MTR_1g094210 38.065 155 81 6 7 161 195 334 3.00e-20 91.3
MsG0280007127.01.T01 MTR_4g030830 28.139 231 136 8 6 211 154 379 3.02e-20 90.9
MsG0280007127.01.T01 MTR_8g062660 31.401 207 115 7 6 206 178 363 3.24e-20 92.0
MsG0280007127.01.T01 MTR_5g026830 42.857 126 62 5 101 221 161 281 3.42e-20 89.4
MsG0280007127.01.T01 MTR_2g425980 30.222 225 143 6 6 221 158 377 4.85e-20 90.5
MsG0280007127.01.T01 MTR_7g056390 30.568 229 113 8 9 204 180 395 7.03e-20 90.1
MsG0280007127.01.T01 MTR_1g115180 46.218 119 48 4 93 202 70 181 7.58e-20 86.7
MsG0280007127.01.T01 MTR_7g057270 32.174 230 117 11 1 200 169 389 7.73e-20 90.1
MsG0280007127.01.T01 MTR_7g056290 30.568 229 113 8 9 204 184 399 9.68e-20 89.7
MsG0280007127.01.T01 MTR_1g056270 36.559 186 79 10 37 209 47 206 1.07e-19 86.7
MsG0280007127.01.T01 MTR_0707s0020 31.193 218 129 8 2 200 204 419 1.92e-19 89.0
MsG0280007127.01.T01 MTR_3g010880 39.189 148 75 4 66 201 173 317 2.07e-19 87.8
MsG0280007127.01.T01 MTR_7g078900 32.407 216 118 9 7 200 177 386 2.22e-19 88.6
MsG0280007127.01.T01 MTR_2g426020 30.568 229 135 9 6 221 160 377 2.50e-19 88.2
MsG0280007127.01.T01 MTR_2g021050 32.995 197 119 7 6 194 130 321 3.29e-19 87.8
MsG0280007127.01.T01 MTR_5g058620 29.864 221 119 11 7 199 33 245 3.38e-19 86.3
MsG0280007127.01.T01 MTR_1g058870 29.864 221 119 11 7 199 33 245 3.38e-19 86.3
MsG0280007127.01.T01 MTR_2g024100 32.828 198 102 8 6 186 154 337 5.81e-19 87.4
MsG0280007127.01.T01 MTR_2g024110 30.102 196 118 6 6 191 139 325 1.46e-18 85.9
MsG0280007127.01.T01 MTR_4g024890 31.336 217 124 8 4 200 149 360 1.91e-18 85.5
MsG0280007127.01.T01 MTR_5g056020 30.531 226 122 8 7 198 170 394 1.98e-18 86.3
MsG0280007127.01.T01 MTR_2g031720 30.252 238 144 10 4 226 139 369 2.25e-18 85.5
MsG0280007127.01.T01 MTR_7g028660 32.692 208 116 8 7 199 156 354 2.53e-18 85.1
MsG0280007127.01.T01 MTR_7g066000 31.797 217 120 9 7 204 174 381 3.17e-18 85.1
MsG0280007127.01.T01 MTR_7g009265 32.456 228 105 12 7 199 85 298 3.88e-18 84.0
MsG0280007127.01.T01 MTR_6g092560 30.233 215 121 8 7 198 161 369 3.92e-18 85.1
MsG0280007127.01.T01 MTR_8g467140 36.810 163 90 7 5 163 168 321 4.01e-18 84.0
MsG0280007127.01.T01 MTR_4g031020 30.488 246 132 9 7 218 189 429 4.81e-18 84.7
MsG0280007127.01.T01 MTR_1g068835 32.099 162 92 5 4 157 138 289 4.97e-18 84.3
MsG0280007127.01.T01 MTR_2g060555 30.476 210 120 7 7 212 87 274 5.17e-18 83.2
MsG0280007127.01.T01 MTR_6g007130 42.453 106 55 3 122 221 17 122 1.04e-17 78.6
MsG0280007127.01.T01 MTR_7g066030 30.734 218 110 10 7 200 179 379 1.51e-17 83.2
MsG0280007127.01.T01 MTR_2g426070 32.237 152 98 2 6 157 165 311 1.56e-17 83.2
MsG0280007127.01.T01 MTR_7g070830 32.353 170 97 4 7 161 185 351 1.91e-17 83.2
MsG0280007127.01.T01 MTR_4g030980 30.612 245 133 10 7 218 189 429 2.77e-17 82.4
MsG0280007127.01.T01 MTR_4g019990 29.279 222 135 8 3 206 153 370 3.46e-17 82.0
MsG0280007127.01.T01 MTR_7g078860 32.877 219 113 11 7 200 164 373 3.91e-17 82.0
MsG0280007127.01.T01 MTR_6g007140 45.122 82 44 1 122 202 17 98 4.56e-17 77.4
MsG0280007127.01.T01 MTR_4g013185 28.444 225 119 9 6 198 174 388 4.95e-17 81.6
MsG0280007127.01.T01 MTR_5g043160 28.696 230 135 8 1 204 211 437 5.66e-17 81.6
MsG0280007127.01.T01 MTR_2g043400 27.706 231 121 7 9 205 180 398 5.77e-17 81.6
MsG0280007127.01.T01 MTR_2g426090 31.156 199 125 6 6 199 160 351 5.85e-17 81.6
MsG0280007127.01.T01 MTR_7g055930 29.204 226 116 8 7 199 185 399 5.95e-17 81.6
MsG0280007127.01.T01 MTR_7g055830 29.204 226 116 8 7 199 117 331 6.63e-17 80.9
MsG0280007127.01.T01 MTR_7g055870 29.204 226 116 8 7 199 185 399 1.02e-16 80.9
MsG0280007127.01.T01 MTR_4g006350 28.696 230 133 10 5 209 636 859 1.22e-16 81.3
MsG0280007127.01.T01 MTR_3g096250 32.663 199 68 6 6 202 189 323 1.31e-16 80.1
MsG0280007127.01.T01 MTR_0128s0010 32.558 215 117 11 7 202 170 375 1.33e-16 80.5
MsG0280007127.01.T01 MTR_4g008790 27.854 219 110 7 6 198 212 408 1.34e-16 80.9
MsG0280007127.01.T01 MTR_4g108810 35.849 159 82 6 53 198 58 209 1.37e-16 78.2
MsG0280007127.01.T01 MTR_7g445890 29.258 229 125 10 7 204 140 362 1.63e-16 80.1
MsG0280007127.01.T01 MTR_6g086920 30.342 234 128 9 2 202 216 447 1.76e-16 80.5
MsG0280007127.01.T01 MTR_2g461450 28.505 214 133 6 7 206 148 355 1.85e-16 79.7
MsG0280007127.01.T01 MTR_0667s0010 29.237 236 137 9 6 221 152 377 2.33e-16 79.7
MsG0280007127.01.T01 MTR_1g057890 33.333 207 106 8 5 206 160 339 2.50e-16 79.3
MsG0280007127.01.T01 MTR_2g047892 27.854 219 123 8 7 204 171 375 2.69e-16 79.3
MsG0280007127.01.T01 MTR_7g056717 32.353 204 107 9 9 195 171 360 3.04e-16 79.3
MsG0280007127.01.T01 MTR_7g091630 32.370 173 91 7 7 161 181 345 3.16e-16 79.3
MsG0280007127.01.T01 MTR_7g055987 32.716 162 92 5 9 165 167 316 4.45e-16 78.6
MsG0280007127.01.T01 MTR_2g426060 28.333 240 139 9 6 227 159 383 4.49e-16 79.0
MsG0280007127.01.T01 MTR_7g070880 29.167 216 122 8 7 198 185 393 6.28e-16 78.6
MsG0280007127.01.T01 MTR_4g070550 32.317 164 100 6 2 159 157 315 6.79e-16 78.2
MsG0280007127.01.T01 MTR_1g055045 34.014 147 80 6 67 206 8 144 8.41e-16 74.3
MsG0280007127.01.T01 MTR_7g056003 28.261 230 116 8 9 202 168 384 8.97e-16 77.8
MsG0280007127.01.T01 MTR_5g068040 31.765 170 86 6 7 161 151 305 1.11e-15 77.4
MsG0280007127.01.T01 MTR_4g033495 31.579 209 115 8 7 198 184 381 1.17e-15 77.8
MsG0280007127.01.T01 MTR_4g013175 27.826 230 130 9 6 206 174 396 1.24e-15 77.8
MsG0280007127.01.T01 MTR_4g013180 29.515 227 125 11 7 206 155 373 1.26e-15 77.8
MsG0280007127.01.T01 MTR_3g072470 30.493 223 102 9 9 199 180 381 1.32e-15 77.4
MsG0280007127.01.T01 MTR_2g028110 32.086 187 110 8 6 187 147 321 1.54e-15 77.0
MsG0280007127.01.T01 MTR_2g031680 35.032 157 91 5 7 157 139 290 1.62e-15 77.0
MsG0280007127.01.T01 MTR_2g019830 60.317 63 24 1 144 206 1 62 2.03e-15 74.3
MsG0280007127.01.T01 MTR_7g091640 34.706 170 89 9 7 161 182 344 2.37e-15 76.6
MsG0280007127.01.T01 MTR_7g061090 28.947 228 127 10 1 206 176 390 2.39e-15 76.6
MsG0280007127.01.T01 MTR_7g056737 31.401 207 115 9 9 200 171 365 2.70e-15 76.6
MsG0280007127.01.T01 MTR_7g061010 30.000 210 117 7 8 202 170 364 3.17e-15 76.3
MsG0280007127.01.T01 MTR_7g077910 27.976 168 103 3 7 161 87 249 3.78e-15 75.5
MsG0280007127.01.T01 MTR_2g025420 31.481 162 94 5 6 157 166 320 3.80e-15 76.3
MsG0280007127.01.T01 MTR_4g030090 29.365 252 128 12 7 218 160 401 4.19e-15 75.9
MsG0280007127.01.T01 MTR_7g061060 29.464 224 127 9 1 206 159 369 4.88e-15 75.9
MsG0280007127.01.T01 MTR_4g020000 28.636 220 118 8 7 200 113 319 5.14e-15 75.5
MsG0280007127.01.T01 MTR_2g043410 26.923 234 126 7 9 209 180 401 5.39e-15 75.9
MsG0280007127.01.T01 MTR_8g066440 27.907 215 130 9 3 199 171 378 6.07e-15 75.5
MsG0280007127.01.T01 MTR_6g065510 26.147 218 121 8 7 199 104 306 7.90e-15 74.7
MsG0280007127.01.T01 MTR_2g028160 28.216 241 138 9 6 223 163 391 1.10e-14 74.7
MsG0280007127.01.T01 MTR_8g099460 31.481 162 90 6 4 157 151 299 1.39e-14 74.3
MsG0280007127.01.T01 MTR_1g068875 30.625 160 93 5 6 157 139 288 1.47e-14 74.3
MsG0280007127.01.T01 MTR_7g066840 29.245 212 118 10 8 197 168 369 1.72e-14 73.9
MsG0280007127.01.T01 MTR_0128s0020 28.708 209 120 8 4 197 172 366 2.26e-14 73.6
MsG0280007127.01.T01 MTR_5g096710 28.837 215 126 12 6 202 171 376 3.50e-14 73.2
MsG0280007127.01.T01 MTR_3g013470 29.302 215 123 8 5 198 134 340 4.04e-14 72.8
MsG0280007127.01.T01 MTR_2g025960 33.333 159 86 7 6 157 68 213 4.13e-14 72.4
MsG0280007127.01.T01 MTR_2g047200 27.273 209 125 8 7 199 172 369 4.48e-14 72.8
MsG0280007127.01.T01 MTR_6g017295 33.735 166 95 6 7 162 95 255 4.99e-14 73.2
MsG0280007127.01.T01 MTR_7g077970 27.477 222 123 7 7 198 170 383 5.09e-14 72.8
MsG0280007127.01.T01 MTR_7g061050 27.803 223 134 7 1 206 156 368 5.17e-14 72.8
MsG0280007127.01.T01 MTR_6g017305 27.854 219 126 9 7 199 44 256 5.23e-14 71.6
MsG0280007127.01.T01 MTR_3g058480 46.226 106 40 5 7 109 191 282 5.41e-14 72.0
MsG0280007127.01.T01 MTR_1g442850 31.373 204 114 9 9 197 159 351 6.72e-14 72.4
MsG0280007127.01.T01 MTR_2g010950 29.412 221 124 10 7 202 169 382 6.96e-14 72.4
MsG0280007127.01.T01 MTR_7g056503 26.087 207 134 7 7 199 171 372 7.10e-14 72.4
MsG0280007127.01.T01 MTR_7g077070 30.097 206 110 9 7 187 180 376 7.25e-14 72.4
MsG0280007127.01.T01 MTR_7g060940 29.032 217 115 9 9 202 170 370 1.30e-13 71.6
MsG0280007127.01.T01 MTR_1g068860 27.215 158 106 5 4 157 139 291 1.41e-13 71.2
MsG0280007127.01.T01 MTR_3g083010 29.091 165 103 5 2 159 164 321 1.70e-13 71.2
MsG0280007127.01.T01 MTR_7g056173 28.319 226 118 10 7 199 27 241 1.77e-13 70.5
MsG0280007127.01.T01 MTR_4g129160 31.737 167 96 7 8 161 170 331 2.19e-13 70.5
MsG0280007127.01.T01 MTR_7g050480 30.841 214 110 10 9 202 171 366 3.91e-13 70.1
MsG0280007127.01.T01 MTR_7g062060 27.488 211 133 7 3 200 177 380 4.78e-13 69.7
MsG0280007127.01.T01 MTR_1g097520 40.650 123 56 6 8 127 52 160 5.16e-13 66.6
MsG0280007127.01.T01 MTR_3g096270 44.800 125 46 7 10 129 142 248 5.39e-13 68.9
MsG0280007127.01.T01 MTR_5g097210 32.353 204 115 8 3 197 139 328 5.43e-13 69.3
MsG0280007127.01.T01 MTR_7g056260 30.460 174 91 5 2 159 156 315 6.24e-13 68.9
MsG0280007127.01.T01 MTR_4g023070 29.952 207 123 8 6 197 138 337 7.13e-13 68.9
MsG0280007127.01.T01 MTR_7g050520 30.841 214 110 10 9 202 171 366 7.79e-13 68.9
MsG0280007127.01.T01 MTR_7g061940 28.922 204 112 11 9 195 79 266 1.43e-12 67.4
MsG0280007127.01.T01 MTR_6g081280 26.697 221 117 9 7 202 18 218 1.75e-12 66.6
MsG0280007127.01.T01 MTR_4g055040 50.794 63 27 1 144 202 1 63 1.77e-12 62.8
MsG0280007127.01.T01 MTR_7g066080 32.075 159 101 4 7 159 169 326 2.28e-12 67.8
MsG0280007127.01.T01 MTR_5g096010 30.189 159 56 4 4 162 3 106 2.79e-12 63.2
MsG0280007127.01.T01 MTR_4g129190 28.085 235 120 12 7 205 153 374 3.71e-12 67.0
MsG0280007127.01.T01 MTR_7g056797 24.880 209 137 7 6 199 174 377 4.86e-12 66.6
MsG0280007127.01.T01 MTR_0649s0020 28.829 222 119 9 3 198 153 361 5.78e-12 66.6
MsG0280007127.01.T01 MTR_2g047895 26.244 221 127 6 7 209 93 295 6.64e-12 65.9
MsG0280007127.01.T01 MTR_7g078040 27.602 221 126 10 7 198 179 394 6.96e-12 66.2
MsG0280007127.01.T01 MTR_3g464470 28.311 219 122 10 7 199 145 354 7.07e-12 66.2
MsG0280007127.01.T01 MTR_8g030630 29.189 185 103 6 30 202 272 440 8.01e-12 66.2
MsG0280007127.01.T01 MTR_0128s0070 28.230 209 117 10 6 197 177 369 8.65e-12 65.9
MsG0280007127.01.T01 MTR_7g445750 30.921 152 87 4 9 148 184 329 2.86e-11 63.9
MsG0280007127.01.T01 MTR_7g052670 28.696 230 127 10 7 204 180 404 3.29e-11 64.3
MsG0280007127.01.T01 MTR_7g062100 32.716 162 87 8 7 158 173 322 3.62e-11 63.9
MsG0280007127.01.T01 MTR_7g055977 26.977 215 118 9 9 198 155 355 3.71e-11 63.9
MsG0280007127.01.T01 MTR_7g056200 31.977 172 89 7 38 184 169 337 4.60e-11 63.5
MsG0280007127.01.T01 MTR_1g071010 28.910 211 123 11 7 199 160 361 5.60e-11 63.5
MsG0280007127.01.T01 MTR_7g074260 30.500 200 96 8 7 202 44 204 6.81e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007127.01.T01 AT3G23880 33.500 200 107 7 7 201 159 337 2.76e-17 82.0
MsG0280007127.01.T01 AT4G12560 33.173 208 116 9 4 194 137 338 4.03e-17 82.0
MsG0280007127.01.T01 AT4G12560 33.173 208 116 9 4 194 137 338 4.03e-17 82.0
MsG0280007127.01.T01 AT4G12560 33.173 208 116 9 4 194 137 338 4.03e-17 82.0
MsG0280007127.01.T01 AT3G06240 28.571 210 122 9 4 206 211 399 5.20e-14 72.8
MsG0280007127.01.T01 AT4G22390 28.079 203 119 8 4 189 137 329 1.25e-13 71.6
MsG0280007127.01.T01 AT4G22390 28.079 203 119 8 4 189 137 329 1.68e-13 71.2

Find 78 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATACACTAATGGGCTTA+TGG 0.161038 2:-10979222 MsG0280007127.01.T01:CDS
TACCTTCTTGGATCAGTAAA+TGG 0.201338 2:+10979002 None:intergenic
TTGATGACAGTTCTCATAAT+AGG 0.277639 2:-10981392 MsG0280007127.01.T01:CDS
TGAAAGATCATCCTCGTTCT+TGG 0.296593 2:-10980987 MsG0280007127.01.T01:CDS
TAATAGGGACTTGGTTACTA+TGG 0.300301 2:-10978875 MsG0280007127.01.T01:intron
ACGAGTCTTCGGTACCTTCT+TGG 0.305166 2:+10978990 None:intergenic
TGCTTGTCCACTTTATGTTT+CGG 0.314507 2:-10980959 MsG0280007127.01.T01:CDS
AAATACACTAATGGGCTTAT+GGG 0.314699 2:-10979221 MsG0280007127.01.T01:CDS
GTTTGGCTTATGAAGGAGTA+TGG 0.318033 2:-10981051 MsG0280007127.01.T01:CDS
TAGTGCGATCATTAGAAAAT+AGG 0.336866 2:+10981082 None:intergenic
TTGTCTGTGGAACTATTAAT+TGG 0.341551 2:-10981266 MsG0280007127.01.T01:CDS
ATATTTACAAATACACTAAT+GGG 0.350895 2:-10979229 MsG0280007127.01.T01:CDS
TATATTTACAAATACACTAA+TGG 0.354368 2:-10979230 MsG0280007127.01.T01:CDS
TGAAGTGTCCGACCAATCTT+TGG 0.357653 2:+10981224 None:intergenic
ATCCAGAACGAATGGGGATT+TGG 0.362098 2:-10981482 None:intergenic
ATTTGGACACTGTATGGCTT+TGG 0.372558 2:-10981465 MsG0280007127.01.T01:CDS
AGTATGGAAATAATGATTCT+TGG 0.372639 2:-10981035 MsG0280007127.01.T01:CDS
CATGTCCAGGGAGGAGTTCA+TGG 0.390316 2:+10979030 None:intergenic
ATTGGTCCACATCTAAAGAT+TGG 0.424213 2:-10981248 MsG0280007127.01.T01:CDS
ATTTGGAGAAGGAGTCATAT+CGG 0.431318 2:-10981182 MsG0280007127.01.T01:CDS
CTAAAGATTGGTCCAAAGAT+TGG 0.431579 2:-10981236 MsG0280007127.01.T01:CDS
ATCGCACTAATACAGATGTT+TGG 0.431751 2:-10981068 MsG0280007127.01.T01:CDS
ATGGGGATTTGGACACTGTA+TGG 0.435233 2:-10981471 MsG0280007127.01.T01:CDS
TACTACTCAATGCAGGTCTT+AGG 0.436586 2:+10978848 None:intergenic
ATACTTCGGCTACTAACTCT+TGG 0.445539 2:-10981344 MsG0280007127.01.T01:CDS
ACAAGGTTGTTGTTGTTGAT+TGG 0.448847 2:-10981419 MsG0280007127.01.T01:CDS
CCTGAACCATCCGCACCAAA+AGG 0.459831 2:+10981294 None:intergenic
TACAGATGTTTGGCTTATGA+AGG 0.463785 2:-10981058 MsG0280007127.01.T01:CDS
TCCGACATTCTCGAGGGAAC+TGG 0.466747 2:-10979082 MsG0280007127.01.T01:CDS
TTAGCTTACCAACGAGTCTT+CGG 0.468359 2:+10978979 None:intergenic
ATCCGCACCAAAAGGGGCAC+AGG 0.468423 2:+10981302 None:intergenic
GTGATTGTCTAATAGGGACT+TGG 0.469305 2:-10978884 MsG0280007127.01.T01:intron
TAATCTCTCACCGCAGGTGG+TGG 0.472915 2:+10979259 None:intergenic
CTCTTCCATGAACTCCTCCC+TGG 0.477654 2:-10979035 MsG0280007127.01.T01:CDS
ATCTTTATTGTTCCAGCTCG+AGG 0.485229 2:+10979172 None:intergenic
CTCCAACACTCCCCTCGAGC+TGG 0.493772 2:-10979184 MsG0280007127.01.T01:CDS
ACCTTCTTGGATCAGTAAAT+GGG 0.497255 2:+10979003 None:intergenic
GTAAATGGGTCCTCATGTCC+AGG 0.498813 2:+10979017 None:intergenic
CTGAACCATCCGCACCAAAA+GGG 0.503396 2:+10981295 None:intergenic
ACGGTTATCACTCTATGATC+AGG 0.514099 2:+10981144 None:intergenic
ACAAATAATCTCAATCTCAC+TGG 0.516091 2:-10979130 MsG0280007127.01.T01:CDS
TTCCAGCTCGAGGGGAGTGT+TGG 0.516871 2:+10979182 None:intergenic
AATAAAGATTATATGCATTG+AGG 0.527764 2:-10979158 MsG0280007127.01.T01:CDS
GTTGTTTACAATTCTAGAGA+TGG 0.529923 2:-10980898 MsG0280007127.01.T01:CDS
TCAAACTCTGGTTCATACTT+CGG 0.532567 2:-10981358 MsG0280007127.01.T01:CDS
TTTGGAGAAGGAGTCATATC+GGG 0.532870 2:-10981181 MsG0280007127.01.T01:CDS
AATAGGGACTTGGTTACTAT+GGG 0.537386 2:-10978874 MsG0280007127.01.T01:intron
TTTGGACCAATCTTTAGATG+TGG 0.544943 2:+10981242 None:intergenic
TCTTTATTGTTCCAGCTCGA+GGG 0.553746 2:+10979173 None:intergenic
ACATTAGGACTGGGTTCTGA+TGG 0.563034 2:-10979310 MsG0280007127.01.T01:intron
CTTTATTGTTCCAGCTCGAG+GGG 0.564080 2:+10979174 None:intergenic
TCATCCTCCGAAACATAAAG+TGG 0.564832 2:+10980952 None:intergenic
TTCTTGTAATCTCTCACCGC+AGG 0.572728 2:+10979253 None:intergenic
TCCGCACCAAAAGGGGCACA+GGG 0.573315 2:+10981303 None:intergenic
TGAACCATCCGCACCAAAAG+GGG 0.576134 2:+10981296 None:intergenic
TCATGTAAGTGACACTTACA+AGG 0.583631 2:-10981436 MsG0280007127.01.T01:CDS
TTGTCCACTTTATGTTTCGG+AGG 0.598015 2:-10980956 MsG0280007127.01.T01:CDS
TGAACTCCTCCCTGGACATG+AGG 0.599142 2:-10979027 MsG0280007127.01.T01:CDS
CGGCTACTAACTCTTGGAGA+AGG 0.607153 2:-10981338 MsG0280007127.01.T01:CDS
TTGTAATCTCTCACCGCAGG+TGG 0.607979 2:+10979256 None:intergenic
AGATTGGTCCAAAGATTGGT+CGG 0.616283 2:-10981232 MsG0280007127.01.T01:CDS
ACCCATTTACTGATCCAAGA+AGG 0.621051 2:-10979004 MsG0280007127.01.T01:CDS
GCCAGTTCCCTCGAGAATGT+CGG 0.625446 2:+10979081 None:intergenic
GCATGTATCCGACATTCTCG+AGG 0.626104 2:-10979089 MsG0280007127.01.T01:CDS
AGAAGGTACCGAAGACTCGT+TGG 0.626213 2:-10978987 MsG0280007127.01.T01:intron
ACTTGATATGACGTCCGAGT+TGG 0.627296 2:-10980920 MsG0280007127.01.T01:CDS
CGAGGATGATCTTTCATGTG+AGG 0.627894 2:+10980994 None:intergenic
TCCCAAGATAAAATTATCCA+CGG 0.630514 2:+10981125 None:intergenic
TAAATGGGTCCTCATGTCCA+GGG 0.645353 2:+10979018 None:intergenic
GGTTCAGGAACAGTTGTCTG+TGG 0.652664 2:-10981279 MsG0280007127.01.T01:CDS
CATGTATCCGACATTCTCGA+GGG 0.656655 2:-10979088 MsG0280007127.01.T01:CDS
AGAATTGTAAACAACCAACT+CGG 0.658529 2:+10980906 None:intergenic
GTCGAGAACTCCACCACCTG+CGG 0.671176 2:-10979269 MsG0280007127.01.T01:CDS
GTTATCACTCTATGATCAGG+TGG 0.673556 2:+10981147 None:intergenic
CAAGCATAAGTCCAAGAACG+AGG 0.681443 2:+10980976 None:intergenic
GATCTTTCATGTGAGGAACA+CGG 0.684387 2:+10981001 None:intergenic
ATGGGTCCTCATGTCCAGGG+AGG 0.746077 2:+10979021 None:intergenic
TGATCATAGAGTGATAACCG+TGG 0.748796 2:-10981142 MsG0280007127.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTACAAATACACTAAT+GGG - Chr2:10981092-10981111 MsG0280007127.01.T01:CDS 15.0%
!! ATGGATTTAATTATTTATCA+GGG - Chr2:10980049-10980068 MsG0280007127.01.T01:intron 15.0%
!! TAAATATAAAAGTTGCAATT+AGG + Chr2:10979614-10979633 None:intergenic 15.0%
!! TATATTTACAAATACACTAA+TGG - Chr2:10981091-10981110 MsG0280007127.01.T01:CDS 15.0%
!! TATGGATTTAATTATTTATC+AGG - Chr2:10980048-10980067 MsG0280007127.01.T01:intron 15.0%
!! TTTATTAAAATTTCTGATGA+TGG - Chr2:10979834-10979853 MsG0280007127.01.T01:intron 15.0%
!! AATAAAGATTATATGCATTG+AGG - Chr2:10981163-10981182 MsG0280007127.01.T01:CDS 20.0%
!! ATACATACTAATACTATTCA+AGG + Chr2:10979531-10979550 None:intergenic 20.0%
!! TTAATGTGCATTTCATTATA+TGG - Chr2:10979745-10979764 MsG0280007127.01.T01:intron 20.0%
!! TTGAAATGTTGTGTTAATTT+GGG - Chr2:10980916-10980935 MsG0280007127.01.T01:CDS 20.0%
!! TTGTGAAATCATAGAAAATA+GGG - Chr2:10980150-10980169 MsG0280007127.01.T01:intron 20.0%
!!! AAGTTATATTTTGTTTGAAG+TGG - Chr2:10980382-10980401 MsG0280007127.01.T01:intron 20.0%
!!! ACTATATTATTTTGATCATC+AGG - Chr2:10980732-10980751 MsG0280007127.01.T01:intron 20.0%
!!! AGTTATATTTTGTTTGAAGT+GGG - Chr2:10980383-10980402 MsG0280007127.01.T01:intron 20.0%
!!! GTTTATTGTTTCTTTTGATT+TGG - Chr2:10979122-10979141 MsG0280007127.01.T01:CDS 20.0%
!!! TTCAAAAGACATTTTATTGT+TGG - Chr2:10979466-10979485 MsG0280007127.01.T01:intron 20.0%
! AACTTATATAGGGTTTATTC+AGG - Chr2:10980265-10980284 MsG0280007127.01.T01:intron 25.0%
! AGTATGGAAATAATGATTCT+TGG - Chr2:10979286-10979305 MsG0280007127.01.T01:CDS 25.0%
! AGTTCTGTTGAACTTATATA+GGG - Chr2:10980255-10980274 MsG0280007127.01.T01:intron 25.0%
! ATATTTACTACTCACTTCAT+TGG - Chr2:10979627-10979646 MsG0280007127.01.T01:intron 25.0%
! CTTGAAATGTTGTGTTAATT+TGG - Chr2:10980915-10980934 MsG0280007127.01.T01:CDS 25.0%
! CTTGTGAAATCATAGAAAAT+AGG - Chr2:10980149-10980168 MsG0280007127.01.T01:intron 25.0%
! TTATTCATAACATTAGGACT+GGG - Chr2:10981002-10981021 MsG0280007127.01.T01:CDS 25.0%
!! GCATTGTTATTCATAACATT+AGG - Chr2:10980996-10981015 MsG0280007127.01.T01:CDS 25.0%
!!! ATTGCTATTTTAGGATCAAT+TGG - Chr2:10980953-10980972 MsG0280007127.01.T01:CDS 25.0%
!!! ATTGGTTGTTGTTTAATCAT+TGG - Chr2:10979645-10979664 MsG0280007127.01.T01:intron 25.0%
!!! CTGATTTGGTTTTCTTAAAT+TGG - Chr2:10979771-10979790 MsG0280007127.01.T01:intron 25.0%
!!! GTGCAACTATATATTTTAAG+AGG + Chr2:10980314-10980333 None:intergenic 25.0%
!!! TCTCACATAATTGCTATTTT+AGG - Chr2:10980944-10980963 MsG0280007127.01.T01:CDS 25.0%
!!! TCTTAGTTGAAGTTTTTTGT+TGG - Chr2:10979717-10979736 MsG0280007127.01.T01:intron 25.0%
!!! TTATTTTGATCATCAGGTTT+TGG - Chr2:10980738-10980757 MsG0280007127.01.T01:intron 25.0%
!!! TTGCTATTTTAGGATCAATT+GGG - Chr2:10980954-10980973 MsG0280007127.01.T01:CDS 25.0%
AAAAATTTAGTGAGCGAGAA+AGG + Chr2:10979989-10980008 None:intergenic 30.0%
AAAATTTAGTGAGCGAGAAA+GGG + Chr2:10979988-10980007 None:intergenic 30.0%
AAGGTGATATTAAACTCTCT+TGG + Chr2:10979506-10979525 None:intergenic 30.0%
AATCATAGAAAATAGGGATC+AGG - Chr2:10980156-10980175 MsG0280007127.01.T01:intron 30.0%
ACAAATAATCTCAATCTCAC+TGG - Chr2:10981191-10981210 MsG0280007127.01.T01:CDS 30.0%
ACTAATACTATTCAAGGACA+AGG + Chr2:10979525-10979544 None:intergenic 30.0%
AGAATTGTAAACAACCAACT+CGG + Chr2:10979418-10979437 None:intergenic 30.0%
ATGCAAACAACATAGAATCA+TGG - Chr2:10979909-10979928 MsG0280007127.01.T01:intron 30.0%
ATGGATTCTTGATACACAAA+TGG + Chr2:10979572-10979591 None:intergenic 30.0%
CAAAGAAAGACATGTTTGTT+TGG - Chr2:10980479-10980498 MsG0280007127.01.T01:intron 30.0%
CACAAAGAGAATGAAGAAAA+TGG + Chr2:10981420-10981439 None:intergenic 30.0%
CACAAATTTCATATTGTGTG+CGG - Chr2:10979860-10979879 MsG0280007127.01.T01:intron 30.0%
CAGTTCTGTTGAACTTATAT+AGG - Chr2:10980254-10980273 MsG0280007127.01.T01:intron 30.0%
CCAAATTTGAACCTTATTGT+GGG - Chr2:10980080-10980099 MsG0280007127.01.T01:intron 30.0%
CCACAATAAGGTTCAAATTT+GGG + Chr2:10980082-10980101 None:intergenic 30.0%
CTCTTTGTGATTGTCTAATA+GGG - Chr2:10981431-10981450 MsG0280007127.01.T01:CDS 30.0%
GTTATTCATAACATTAGGAC+TGG - Chr2:10981001-10981020 MsG0280007127.01.T01:CDS 30.0%
TAAAAGTTGCAATTAGGAAG+TGG + Chr2:10979608-10979627 None:intergenic 30.0%
TAGTGCGATCATTAGAAAAT+AGG + Chr2:10979242-10979261 None:intergenic 30.0%
TATATAGGGTTTATTCAGGT+TGG - Chr2:10980269-10980288 MsG0280007127.01.T01:intron 30.0%
TCAACTTCTACTTGAATTAG+TGG - Chr2:10980199-10980218 MsG0280007127.01.T01:intron 30.0%
TCATAATAGCTTTCTATGCA+TGG - Chr2:10980025-10980044 MsG0280007127.01.T01:intron 30.0%
TCCCAAGATAAAATTATCCA+CGG + Chr2:10979199-10979218 None:intergenic 30.0%
TCTCTTTGTGATTGTCTAAT+AGG - Chr2:10981430-10981449 MsG0280007127.01.T01:CDS 30.0%
TTCAAGACTTGTATATGAGA+AGG + Chr2:10980849-10980868 None:intergenic 30.0%
TTGTCTGTGGAACTATTAAT+TGG - Chr2:10979055-10979074 MsG0280007127.01.T01:CDS 30.0%
TTTCGTCTGATTTCATGATT+TGG - Chr2:10980771-10980790 MsG0280007127.01.T01:intron 30.0%
! AACCGTGGATAATTTTATCT+TGG - Chr2:10979194-10979213 MsG0280007127.01.T01:CDS 30.0%
! ACCGTGGATAATTTTATCTT+GGG - Chr2:10979195-10979214 MsG0280007127.01.T01:CDS 30.0%
! GTTGTTTACAATTCTAGAGA+TGG - Chr2:10979423-10979442 MsG0280007127.01.T01:intron 30.0%
! TCATTATATGGCTACTGATT+TGG - Chr2:10979757-10979776 MsG0280007127.01.T01:intron 30.0%
! TTGATGACAGTTCTCATAAT+AGG - Chr2:10978929-10978948 MsG0280007127.01.T01:intron 30.0%
!! AAATACACTAATGGGCTTAT+GGG - Chr2:10981100-10981119 MsG0280007127.01.T01:CDS 30.0%
!! GTTGTTGTTTAATCATTGGT+CGG - Chr2:10979649-10979668 MsG0280007127.01.T01:intron 30.0%
!! TTCTAGAGATGGTACTTTTA+AGG - Chr2:10979434-10979453 MsG0280007127.01.T01:intron 30.0%
!!! TAACTTAATTTTTAGCGACC+AGG + Chr2:10980368-10980387 None:intergenic 30.0%
!!! TGCTATTTTAGGATCAATTG+GGG - Chr2:10980955-10980974 MsG0280007127.01.T01:CDS 30.0%
!!! TGTTTCTTTTGATTTGGAGA+AGG - Chr2:10979128-10979147 MsG0280007127.01.T01:CDS 30.0%
AACATCAAATTGCTTGAGCA+AGG + Chr2:10980541-10980560 None:intergenic 35.0%
AACCATGTGCAGATAAAATG+AGG + Chr2:10980456-10980475 None:intergenic 35.0%
ACCTAGTAATTCCCACAATA+AGG + Chr2:10980094-10980113 None:intergenic 35.0%
ACCTTATTGTGGGAATTACT+AGG - Chr2:10980090-10980109 MsG0280007127.01.T01:intron 35.0%
ACCTTCTTGGATCAGTAAAT+GGG + Chr2:10981321-10981340 None:intergenic 35.0%
ACTTCTACTTGAATTAGTGG+TGG - Chr2:10980202-10980221 MsG0280007127.01.T01:intron 35.0%
ATAGCTTTCTATGCATGGTA+TGG - Chr2:10980030-10980049 MsG0280007127.01.T01:intron 35.0%
ATCGCACTAATACAGATGTT+TGG - Chr2:10979253-10979272 MsG0280007127.01.T01:CDS 35.0%
ATTGGTCCACATCTAAAGAT+TGG - Chr2:10979073-10979092 MsG0280007127.01.T01:CDS 35.0%
ATTTGGAGAAGGAGTCATAT+CGG - Chr2:10979139-10979158 MsG0280007127.01.T01:CDS 35.0%
CATCAGTAGCAATGATTGTT+CGG - Chr2:10980690-10980709 MsG0280007127.01.T01:intron 35.0%
CCCAAATTTGAACCTTATTG+TGG - Chr2:10980079-10980098 MsG0280007127.01.T01:intron 35.0%
CCCACAATAAGGTTCAAATT+TGG + Chr2:10980083-10980102 None:intergenic 35.0%
GAAACATATTACCATTGGGA+TGG + Chr2:10979963-10979982 None:intergenic 35.0%
GCTTGTCAAAAATCAAACTC+TGG - Chr2:10978951-10978970 MsG0280007127.01.T01:intron 35.0%
GGAGGAAACATATTACCATT+GGG + Chr2:10979967-10979986 None:intergenic 35.0%
GTTAGTCAAGTAAACAACTC+TGG + Chr2:10980671-10980690 None:intergenic 35.0%
TACCTTCTTGGATCAGTAAA+TGG + Chr2:10981322-10981341 None:intergenic 35.0%
TCATGTAAGTGACACTTACA+AGG - Chr2:10978885-10978904 MsG0280007127.01.T01:intron 35.0%
TGCTTGTCCACTTTATGTTT+CGG - Chr2:10979362-10979381 MsG0280007127.01.T01:intron 35.0%
TGTATCAAGAATCCATCCAT+TGG - Chr2:10979576-10979595 MsG0280007127.01.T01:intron 35.0%
TTGTAAGCAGTCTCTTGATT+TGG - Chr2:10980334-10980353 MsG0280007127.01.T01:intron 35.0%
TTTGGACCAATCTTTAGATG+TGG + Chr2:10979082-10979101 None:intergenic 35.0%
! AATAGGGACTTGGTTACTAT+GGG - Chr2:10981447-10981466 MsG0280007127.01.T01:CDS 35.0%
! ACAAGGTTGTTGTTGTTGAT+TGG - Chr2:10978902-10978921 MsG0280007127.01.T01:intron 35.0%
! CTAAAGATTGGTCCAAAGAT+TGG - Chr2:10979085-10979104 MsG0280007127.01.T01:CDS 35.0%
! TAATAGGGACTTGGTTACTA+TGG - Chr2:10981446-10981465 MsG0280007127.01.T01:CDS 35.0%
! TACAGATGTTTGGCTTATGA+AGG - Chr2:10979263-10979282 MsG0280007127.01.T01:CDS 35.0%
! TACCTCATTTTATCTGCACA+TGG - Chr2:10980451-10980470 MsG0280007127.01.T01:intron 35.0%
! TCAAACTCTGGTTCATACTT+CGG - Chr2:10978963-10978982 MsG0280007127.01.T01:intron 35.0%
! TTGACACATTTTGCACATCA+TGG + Chr2:10980183-10980202 None:intergenic 35.0%
!! CAAATACACTAATGGGCTTA+TGG - Chr2:10981099-10981118 MsG0280007127.01.T01:CDS 35.0%
!! GATGGTACTTTTAAGGATCT+CGG - Chr2:10979441-10979460 MsG0280007127.01.T01:intron 35.0%
!! GGGGCAAGTTTATTTTCTAT+TGG - Chr2:10980974-10980993 MsG0280007127.01.T01:CDS 35.0%
!!! ATTTTATCTTGGGAGTGTTC+AGG - Chr2:10979205-10979224 MsG0280007127.01.T01:CDS 35.0%
!!! TTTTATCTTGGGAGTGTTCA+GGG - Chr2:10979206-10979225 MsG0280007127.01.T01:CDS 35.0%
ACATATTACCATTGGGATGG+TGG + Chr2:10979960-10979979 None:intergenic 40.0%
ACCCATTTACTGATCCAAGA+AGG - Chr2:10981317-10981336 MsG0280007127.01.T01:CDS 40.0%
ACGGTTATCACTCTATGATC+AGG + Chr2:10979180-10979199 None:intergenic 40.0%
ATACTTCGGCTACTAACTCT+TGG - Chr2:10978977-10978996 MsG0280007127.01.T01:intron 40.0%
ATCTTTATTGTTCCAGCTCG+AGG + Chr2:10981152-10981171 None:intergenic 40.0%
ATTTGGACACTGTATGGCTT+TGG - Chr2:10978856-10978875 MsG0280007127.01.T01:CDS 40.0%
GATCTTTCATGTGAGGAACA+CGG + Chr2:10979323-10979342 None:intergenic 40.0%
GGGAGGAAACATATTACCAT+TGG + Chr2:10979968-10979987 None:intergenic 40.0%
GTGATTGTCTAATAGGGACT+TGG - Chr2:10981437-10981456 MsG0280007127.01.T01:CDS 40.0%
GTTATCACTCTATGATCAGG+TGG + Chr2:10979177-10979196 None:intergenic 40.0%
GTTGTTTAATCATTGGTCGG+TGG - Chr2:10979652-10979671 MsG0280007127.01.T01:intron 40.0%
TCATCCTCCGAAACATAAAG+TGG + Chr2:10979372-10979391 None:intergenic 40.0%
TCTTTATTGTTCCAGCTCGA+GGG + Chr2:10981151-10981170 None:intergenic 40.0%
TGAAAGATCATCCTCGTTCT+TGG - Chr2:10979334-10979353 MsG0280007127.01.T01:intron 40.0%
TGATCATAGAGTGATAACCG+TGG - Chr2:10979179-10979198 MsG0280007127.01.T01:CDS 40.0%
TTAGCTTACCAACGAGTCTT+CGG + Chr2:10981345-10981364 None:intergenic 40.0%
TTGTCCACTTTATGTTTCGG+AGG - Chr2:10979365-10979384 MsG0280007127.01.T01:intron 40.0%
TTTCGAAGGGATAACAGTCA+TGG - Chr2:10980409-10980428 MsG0280007127.01.T01:intron 40.0%
TTTGGAGAAGGAGTCATATC+GGG - Chr2:10979140-10979159 MsG0280007127.01.T01:CDS 40.0%
! AGATTGGTCCAAAGATTGGT+CGG - Chr2:10979089-10979108 MsG0280007127.01.T01:CDS 40.0%
! GTTTGGCTTATGAAGGAGTA+TGG - Chr2:10979270-10979289 MsG0280007127.01.T01:CDS 40.0%
! TTGAAGTGGGAGTTTTCGAA+GGG - Chr2:10980396-10980415 MsG0280007127.01.T01:intron 40.0%
!! TTCAGGTTGGTTTCACTTGT+TGG - Chr2:10980282-10980301 MsG0280007127.01.T01:intron 40.0%
!! TTTGAAGTGGGAGTTTTCGA+AGG - Chr2:10980395-10980414 MsG0280007127.01.T01:intron 40.0%
ACTTGATATGACGTCCGAGT+TGG - Chr2:10979401-10979420 MsG0280007127.01.T01:intron 45.0%
ATGGGGATTTGGACACTGTA+TGG - Chr2:10978850-10978869 MsG0280007127.01.T01:CDS 45.0%
ATTTAGTGAGCGAGAAAGGG+AGG + Chr2:10979985-10980004 None:intergenic 45.0%
CAAGCATAAGTCCAAGAACG+AGG + Chr2:10979348-10979367 None:intergenic 45.0%
CATGTATCCGACATTCTCGA+GGG - Chr2:10981233-10981252 MsG0280007127.01.T01:CDS 45.0%
CGAGGATGATCTTTCATGTG+AGG + Chr2:10979330-10979349 None:intergenic 45.0%
CTTTATTGTTCCAGCTCGAG+GGG + Chr2:10981150-10981169 None:intergenic 45.0%
TAAATGGGTCCTCATGTCCA+GGG + Chr2:10981306-10981325 None:intergenic 45.0%
TTCTTGTAATCTCTCACCGC+AGG + Chr2:10981071-10981090 None:intergenic 45.0%
! AATTTTCCCTGTGCCCCTTT+TGG - Chr2:10979012-10979031 MsG0280007127.01.T01:CDS 45.0%
! ACATTAGGACTGGGTTCTGA+TGG - Chr2:10981011-10981030 MsG0280007127.01.T01:CDS 45.0%
! TATTACCATTGGGATGGTGG+AGG + Chr2:10979957-10979976 None:intergenic 45.0%
! TGAAGTGTCCGACCAATCTT+TGG + Chr2:10979100-10979119 None:intergenic 45.0%
!! AAGTGGAAGCATCCAATGGA+TGG + Chr2:10979591-10979610 None:intergenic 45.0%
!! CTTGATTTGGAAAGTGCTCC+TGG - Chr2:10980347-10980366 MsG0280007127.01.T01:intron 45.0%
!! TAGGAAGTGGAAGCATCCAA+TGG + Chr2:10979595-10979614 None:intergenic 45.0%
ACGAGTCTTCGGTACCTTCT+TGG + Chr2:10981334-10981353 None:intergenic 50.0%
AGTTTCTGCAGCCACGAAAC+AGG + Chr2:10980619-10980638 None:intergenic 50.0%
CAATGCTTGTGCCTGTTTCG+TGG - Chr2:10980605-10980624 MsG0280007127.01.T01:intron 50.0%
CGGCTACTAACTCTTGGAGA+AGG - Chr2:10978983-10979002 MsG0280007127.01.T01:intron 50.0%
CTGAACCATCCGCACCAAAA+GGG + Chr2:10979029-10979048 None:intergenic 50.0%
GCATGTATCCGACATTCTCG+AGG - Chr2:10981232-10981251 MsG0280007127.01.T01:CDS 50.0%
GGTTCAGGAACAGTTGTCTG+TGG - Chr2:10979042-10979061 MsG0280007127.01.T01:CDS 50.0%
GTAAATGGGTCCTCATGTCC+AGG + Chr2:10981307-10981326 None:intergenic 50.0%
GTTTCGTGGCTGCAGAAACT+AGG - Chr2:10980619-10980638 MsG0280007127.01.T01:intron 50.0%
TCATTCCTCCACCATCCCAA+TGG - Chr2:10979949-10979968 MsG0280007127.01.T01:intron 50.0%
TGAACCATCCGCACCAAAAG+GGG + Chr2:10979028-10979047 None:intergenic 50.0%
TGTGCGGCTAATGACGATGT+TGG - Chr2:10979876-10979895 MsG0280007127.01.T01:intron 50.0%
TTGTAATCTCTCACCGCAGG+TGG + Chr2:10981068-10981087 None:intergenic 50.0%
!! AGAAGGTACCGAAGACTCGT+TGG - Chr2:10981334-10981353 MsG0280007127.01.T01:CDS 50.0%
CATGTCCAGGGAGGAGTTCA+TGG + Chr2:10981294-10981313 None:intergenic 55.0%
CCTGAACCATCCGCACCAAA+AGG + Chr2:10979030-10979049 None:intergenic 55.0%
CTCTTCCATGAACTCCTCCC+TGG - Chr2:10981286-10981305 MsG0280007127.01.T01:CDS 55.0%
GCCAGTTCCCTCGAGAATGT+CGG + Chr2:10981243-10981262 None:intergenic 55.0%
TAATCTCTCACCGCAGGTGG+TGG + Chr2:10981065-10981084 None:intergenic 55.0%
TCCGACATTCTCGAGGGAAC+TGG - Chr2:10981239-10981258 MsG0280007127.01.T01:CDS 55.0%
TGAACTCCTCCCTGGACATG+AGG - Chr2:10981294-10981313 MsG0280007127.01.T01:CDS 55.0%
!! CCTTTTGGTGCGGATGGTTC+AGG - Chr2:10979027-10979046 MsG0280007127.01.T01:CDS 55.0%
ATGGGTCCTCATGTCCAGGG+AGG + Chr2:10981303-10981322 None:intergenic 60.0%
GTCGAGAACTCCACCACCTG+CGG - Chr2:10981052-10981071 MsG0280007127.01.T01:CDS 60.0%
! ATCCGCACCAAAAGGGGCAC+AGG + Chr2:10979022-10979041 None:intergenic 60.0%
! TCCCTGTGCCCCTTTTGGTG+CGG - Chr2:10979017-10979036 MsG0280007127.01.T01:CDS 60.0%
! TCCGCACCAAAAGGGGCACA+GGG + Chr2:10979021-10979040 None:intergenic 60.0%
! TTCCAGCTCGAGGGGAGTGT+TGG + Chr2:10981142-10981161 None:intergenic 60.0%
!! TGTGCCCCTTTTGGTGCGGA+TGG - Chr2:10979021-10979040 MsG0280007127.01.T01:CDS 60.0%
CTCCAACACTCCCCTCGAGC+TGG - Chr2:10981137-10981156 MsG0280007127.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 10978850 10981493 10978850 ID=MsG0280007127.01;Name=MsG0280007127.01
Chr2 mRNA 10978850 10981493 10978850 ID=MsG0280007127.01.T01;Parent=MsG0280007127.01;Name=MsG0280007127.01.T01;_AED=0.49;_eAED=0.68;_QI=0|0|0|1|1|1|3|0|330
Chr2 exon 10980881 10981493 10980881 ID=MsG0280007127.01.T01:exon:3488;Parent=MsG0280007127.01.T01
Chr2 exon 10978988 10979325 10978988 ID=MsG0280007127.01.T01:exon:3487;Parent=MsG0280007127.01.T01
Chr2 exon 10978850 10978891 10978850 ID=MsG0280007127.01.T01:exon:3486;Parent=MsG0280007127.01.T01
Chr2 CDS 10980881 10981493 10980881 ID=MsG0280007127.01.T01:cds;Parent=MsG0280007127.01.T01
Chr2 CDS 10978988 10979325 10978988 ID=MsG0280007127.01.T01:cds;Parent=MsG0280007127.01.T01
Chr2 CDS 10978850 10978891 10978850 ID=MsG0280007127.01.T01:cds;Parent=MsG0280007127.01.T01
Gene Sequence

>MsG0280007127.01.T01

ATGGGGATTTGGACACTGTATGGCTTTGGATATGATCATGTAAGTGACACTTACAAGGTTGTTGTTGTTGATTGGTATATTGATGACAGTTCTCATAATAGGCTTGTCAAAAATCAAACTCTGGTTCATACTTCGGCTACTAACTCTTGGAGAAGGATTCAGAATTTTCCCTGTGCCCCTTTTGGTGCGGATGGTTCAGGAACAGTTGTCTGTGGAACTATTAATTGGTCCACATCTAAAGATTGGTCCAAAGATTGGTCGGACACTTCATTGTTTATTGTTTCTTTTGATTTGGAGAAGGAGTCATATCGGGAGCTATTGCTGCCACCTGATCATAGAGTGATAACCGTGGATAATTTTATCTTGGGAGTGTTCAGGGATTGCTTGTGCCTATTTTCTAATGATCGCACTAATACAGATGTTTGGCTTATGAAGGAGTATGGAAATAATGATTCTTGGACTAAATTGTTCCGTGTTCCTCACATGAAAGATCATCCTCGTTCTTGGACTTATGCTTGTCCACTTTATGTTTCGGAGGATGATCAAGTGCTACTTGATATGACGTCCGAGTTGGTTGTTTACAATTCTAGAGATGGTACTTTTAAGGATCTCGGACTGGGTTCTGATGGTGTGTCTGTGCTTGTTCAGTCGAGAACTCCACCACCTGCGGTGAGAGATTACAAGAATATATTTACAAATACACTAATGGGCTTATGGGTTCAATACTTAGAACTCCAACACTCCCCTCGAGCTGGAACAATAAAGATTATATGCATTGAGGTTGTTACAAATAATCTCAATCTCACTGGCGTTGTTTCTCAAAGAAAGCATGTATCCGACATTCTCGAGGGAACTGGCATGTTAGACTGTAAAATTGCTGACTCTTCCATGAACTCCTCCCTGGACATGAGGACCCATTTACTGATCCAAGAAGGTACCGAAGACTCGTTGGGACTTGGTTACTATGGGATGCCTAAGACCTGCATTGAGTAG
Protein sequence

>MsG0280007127.01.T01

MGIWTLYGFGYDHVSDTYKVVVVDWYIDDSSHNRLVKNQTLVHTSATNSWRRIQNFPCAPFGADGSGTVVCGTINWSTSKDWSKDWSDTSLFIVSFDLEKESYRELLLPPDHRVITVDNFILGVFRDCLCLFSNDRTNTDVWLMKEYGNNDSWTKLFRVPHMKDHPRSWTYACPLYVSEDDQVLLDMTSELVVYNSRDGTFKDLGLGSDGVSVLVQSRTPPPAVRDYKNIFTNTLMGLWVQYLELQHSPRAGTIKIICIEVVTNNLNLTGVVSQRKHVSDILEGTGMLDCKIADSSMNSSLDMRTHLLIQEGTEDSLGLGYYGMPKTCIE*