AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007611.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007611.01.T01 MTR_2g028870 75.918 245 21 3 1 208 1 244 1.98e-99 301
MsG0280007611.01.T01 MTR_2g028870 98.876 89 1 0 211 299 338 426 5.18e-60 199
MsG0280007611.01.T01 MTR_1g105460 46.392 97 47 1 199 295 214 305 3.55e-25 102
MsG0280007611.01.T01 MTR_1g105450 42.857 91 52 0 205 295 54 144 1.40e-24 97.1
MsG0280007611.01.T01 MTR_4g063815 46.667 90 43 1 199 288 164 248 1.20e-23 97.4
MsG0280007611.01.T01 MTR_5g078410 42.857 98 46 4 199 295 249 337 8.13e-20 88.6
MsG0280007611.01.T01 MTR_2g044240 39.604 101 52 2 195 295 176 267 2.33e-19 86.3
MsG0280007611.01.T01 MTR_3g462430 44.186 86 41 2 210 291 163 245 5.68e-19 84.7
MsG0280007611.01.T01 MTR_3g462570 43.956 91 49 2 206 295 158 247 2.99e-18 85.5
MsG0280007611.01.T01 MTR_3g462570 40.000 85 44 2 209 289 458 539 1.19e-13 71.6
MsG0280007611.01.T01 MTR_8g022900 38.679 106 52 3 197 294 169 269 4.27e-18 82.8
MsG0280007611.01.T01 MTR_3g463280 37.168 113 65 2 174 286 121 227 6.35e-18 82.0
MsG0280007611.01.T01 MTR_3g462530 43.373 83 46 1 206 287 114 196 8.32e-18 82.4
MsG0280007611.01.T01 MTR_3g463310 40.789 76 45 0 211 286 152 227 5.76e-17 79.0
MsG0280007611.01.T01 MTR_3g462590 38.554 83 50 1 210 291 212 294 1.53e-16 78.6
MsG0280007611.01.T01 MTR_0777s0010 39.759 83 49 1 210 291 364 446 1.68e-16 79.7
MsG0280007611.01.T01 MTR_2g044290 43.421 76 38 1 199 274 189 259 1.98e-16 77.8
MsG0280007611.01.T01 MTR_2g044250 43.478 69 39 0 206 274 180 248 3.22e-15 74.3
MsG0280007611.01.T01 MTR_2g044440 42.105 76 39 1 199 274 205 275 5.75e-15 74.3
MsG0280007611.01.T01 MTR_5g062990 40.244 82 44 1 210 291 228 304 1.01e-14 73.6
MsG0280007611.01.T01 MTR_2g044420 41.791 67 39 0 208 274 200 266 5.18e-14 71.2
MsG0280007611.01.T01 MTR_3g055420 29.878 164 75 7 175 299 44 206 4.20e-12 64.7
MsG0280007611.01.T01 MTR_1g105465 39.706 68 40 1 215 282 257 323 4.59e-12 66.2
MsG0280007611.01.T01 MTR_4g063810 41.026 78 41 1 199 276 200 272 6.25e-12 65.5
MsG0280007611.01.T01 MTR_3g462500 43.939 66 34 2 209 272 178 242 1.07e-11 64.3
MsG0280007611.01.T01 MTR_3g055430 28.859 149 71 5 175 288 154 302 3.19e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007611.01.T01 AT4G19670 82.955 88 15 0 212 299 335 422 5.03e-48 168
MsG0280007611.01.T01 AT4G19670 55.319 141 62 1 69 208 98 238 1.71e-45 161
MsG0280007611.01.T01 AT4G19670 82.955 88 15 0 212 299 335 422 5.03e-48 168
MsG0280007611.01.T01 AT4G19670 55.319 141 62 1 69 208 98 238 1.71e-45 161
MsG0280007611.01.T01 AT4G19670 82.955 88 15 0 212 299 335 422 5.03e-48 168
MsG0280007611.01.T01 AT4G19670 55.319 141 62 1 69 208 98 238 1.71e-45 161
MsG0280007611.01.T01 AT4G19670 82.955 88 15 0 212 299 335 422 5.03e-48 168
MsG0280007611.01.T01 AT4G19670 55.319 141 62 1 69 208 98 238 1.71e-45 161
MsG0280007611.01.T01 AT4G19670 82.955 88 15 0 212 299 335 422 5.03e-48 168
MsG0280007611.01.T01 AT4G19670 55.319 141 62 1 69 208 98 238 1.71e-45 161
MsG0280007611.01.T01 AT4G19670 82.955 88 15 0 212 299 335 422 5.03e-48 168
MsG0280007611.01.T01 AT4G19670 55.319 141 62 1 69 208 98 238 1.71e-45 161
MsG0280007611.01.T01 AT4G19670 82.955 88 15 0 212 299 335 422 5.03e-48 168
MsG0280007611.01.T01 AT4G19670 55.319 141 62 1 69 208 98 238 1.71e-45 161
MsG0280007611.01.T01 AT5G60250 51.087 92 42 2 210 299 426 516 3.02e-26 108
MsG0280007611.01.T01 AT3G45470 52.326 86 38 2 210 294 123 206 3.35e-26 103
MsG0280007611.01.T01 AT3G45580 48.837 86 43 1 209 294 292 376 7.08e-25 103
MsG0280007611.01.T01 AT3G53690 48.958 96 44 1 199 294 225 315 1.32e-24 101
MsG0280007611.01.T01 AT5G37560 49.367 79 39 1 209 287 298 375 1.27e-22 97.8
MsG0280007611.01.T01 AT2G25360 45.349 86 46 1 210 295 209 293 7.37e-22 94.7
MsG0280007611.01.T01 AT2G26135 50.000 78 38 1 209 286 269 345 9.14e-22 94.7
MsG0280007611.01.T01 AT3G14250 37.500 104 56 3 195 295 203 300 1.96e-19 87.0
MsG0280007611.01.T01 AT2G26130 46.914 81 42 1 209 289 276 355 3.23e-19 87.4
MsG0280007611.01.T01 AT2G25370 48.750 80 38 2 210 288 365 442 3.60e-19 88.2
MsG0280007611.01.T01 AT2G25370 48.750 80 38 2 210 288 422 499 3.98e-19 88.2
MsG0280007611.01.T01 AT3G45540 43.038 79 44 1 208 286 218 295 1.20e-18 85.5
MsG0280007611.01.T01 AT3G45540 43.038 79 44 1 208 286 189 266 1.42e-18 84.7
MsG0280007611.01.T01 AT2G21420 44.304 79 42 1 209 287 304 380 3.65e-18 84.7
MsG0280007611.01.T01 AT2G19610 42.105 76 42 2 211 285 328 402 1.03e-13 71.6
MsG0280007611.01.T01 AT3G45460 34.146 82 41 1 209 290 288 356 1.40e-12 68.2
MsG0280007611.01.T01 AT3G45480 37.500 80 38 1 211 290 277 344 2.61e-12 67.0
MsG0280007611.01.T01 AT3G43750 38.889 72 41 2 209 279 275 344 1.46e-11 64.7

Find 90 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAAAAGTTTCAAAATTAT+TGG 0.141167 2:+18057266 None:intergenic
AAACATGTCAATGTGCATTT+TGG 0.218252 2:-18053838 MsG0280007611.01.T01:CDS
GAACTAGTTTGTTTGTGATT+TGG 0.286116 2:-18053118 MsG0280007611.01.T01:three_prime_UTR
TGATTCTGAGTTGTTATATA+AGG 0.290859 2:-18058190 MsG0280007611.01.T01:intron
TATCTTTGACCTAAGGTTCA+TGG 0.333991 2:-18053217 MsG0280007611.01.T01:three_prime_UTR
GGCACTGAGAGAGAGGATTC+TGG 0.344286 2:-18057295 MsG0280007611.01.T01:CDS
AATCTGGAATTTCTTTCAAT+TGG 0.345200 2:+18053078 None:intergenic
CTTATACAACGGTTCCTTGA+TGG 0.369025 2:-18053712 MsG0280007611.01.T01:three_prime_UTR
AAACTCTTTCTACAAGTGAT+TGG 0.376608 2:+18053296 None:intergenic
GAAGCATCTCTCTCCTCTTC+CGG 0.382920 2:+18056701 None:intergenic
GCATCACGATGTCTGTGATT+TGG 0.390485 2:-18053424 MsG0280007611.01.T01:three_prime_UTR
GAAAGTGGTGGAAGGGTTGA+AGG 0.395192 2:-18058456 MsG0280007611.01.T01:CDS
CATTTCAAGGTAATCATCAT+TGG 0.403717 2:+18057108 None:intergenic
ATTCTTGTGGTGCTGAGTAC+AGG 0.403888 2:-18053871 MsG0280007611.01.T01:CDS
AATCATTTGTAGACCCTTGA+AGG 0.404045 2:-18053636 MsG0280007611.01.T01:three_prime_UTR
CTGAAATTCTTCACAGCTCA+TGG 0.404489 2:+18056730 None:intergenic
GGAGCCTATGGTTGATTACT+TGG 0.414618 2:-18058274 MsG0280007611.01.T01:CDS
AGAGAAAGTAAAAGAAGAAA+AGG 0.417123 2:-18053156 MsG0280007611.01.T01:three_prime_UTR
ATCGTCTTGCTCAGAATAAA+AGG 0.418491 2:-18056664 MsG0280007611.01.T01:CDS
TTGAGGAGGAGGAGATGGTA+GGG 0.421215 2:+18053664 None:intergenic
GGAGGAGATGGTAGGGATTG+TGG 0.423314 2:+18053671 None:intergenic
ACCATTGTTCTGATTCTTGA+AGG 0.423629 2:+18053793 None:intergenic
GCGTGGGCTGTGGTGTTCCT+TGG 0.429587 2:-18056760 MsG0280007611.01.T01:CDS
TTACATTGAGGAGGAGGAGA+TGG 0.436175 2:+18053659 None:intergenic
GGTTGATTACTTGGCACTCA+TGG 0.440139 2:-18058265 MsG0280007611.01.T01:CDS
GATTACTTGGCACTCATGGA+TGG 0.444840 2:-18058261 MsG0280007611.01.T01:CDS
AAGGTTCATGGATATGTATA+AGG 0.447176 2:-18053205 MsG0280007611.01.T01:three_prime_UTR
ATGCACATTGACATGTTTGT+TGG 0.455985 2:+18053843 None:intergenic
GAATGTGTGTGAACATTTCA+AGG 0.459619 2:+18057095 None:intergenic
ATTTCAGAGTTTGCCGGAAG+AGG 0.462977 2:-18056714 MsG0280007611.01.T01:CDS
CAATTGATATCTTTGACCTA+AGG 0.463187 2:-18053224 MsG0280007611.01.T01:three_prime_UTR
GCAGTTGGCCACAGTAGCTA+TGG 0.467745 2:-18057205 MsG0280007611.01.T01:CDS
TCCTCCTCAGCATTAACAAA+TGG 0.468319 2:+18058581 None:intergenic
CGCAACTTGCGCTTATACAA+CGG 0.469367 2:-18053723 MsG0280007611.01.T01:three_prime_UTR
TATACATATCCATGAACCTT+AGG 0.476096 2:+18053208 None:intergenic
GAGAAGAAGAACAAGAAGAG+TGG 0.486779 2:-18058493 MsG0280007611.01.T01:CDS
TGAAGAATTTCAGAGTTTGC+CGG 0.489641 2:-18056720 MsG0280007611.01.T01:CDS
AAGGTAATCATCATTGGCAC+TGG 0.492248 2:+18057114 None:intergenic
CAGTGAAAGCATAAACCTTA+CGG 0.493680 2:+18058211 None:intergenic
GAAAGAAACTGAGGAGAAAG+TGG 0.499489 2:-18058471 MsG0280007611.01.T01:CDS
GATTTGGCAAAACTACACTT+TGG 0.501387 2:-18053408 MsG0280007611.01.T01:three_prime_UTR
ATTGAGGAGGAGGAGATGGT+AGG 0.505528 2:+18053663 None:intergenic
ATTTGTTAATGCTGAGGAGG+AGG 0.508035 2:-18058579 MsG0280007611.01.T01:CDS
TTTCTACAAGTGATTGGATG+AGG 0.509899 2:+18053302 None:intergenic
CATTCTGTTCACATTGCTTG+AGG 0.513889 2:-18057077 MsG0280007611.01.T01:CDS
ATTACTTGGCACTCATGGAT+GGG 0.518596 2:-18058260 MsG0280007611.01.T01:CDS
CTGAGGAGAAAGTGGTGGAA+GGG 0.519617 2:-18058463 MsG0280007611.01.T01:CDS
AAGAATCAGAACAATGGTCA+TGG 0.522839 2:-18053788 MsG0280007611.01.T01:three_prime_UTR
CCATTGTTCTGATTCTTGAA+GGG 0.524195 2:+18053794 None:intergenic
AAGTTGATGAAGATCCTTCA+AGG 0.524995 2:+18053622 None:intergenic
CACGAGTTCTGCTATTCTTG+TGG 0.526698 2:-18053884 MsG0280007611.01.T01:CDS
GCTACTGTGGCCAACTGCAT+TGG 0.532113 2:+18057210 None:intergenic
ACTGAGGAGAAAGTGGTGGA+AGG 0.534801 2:-18058464 MsG0280007611.01.T01:CDS
CATGGGAGACTCTATGATCA+TGG 0.535446 2:-18053770 MsG0280007611.01.T01:three_prime_UTR
GGCTGCTCAAGATCAATGCT+TGG 0.543956 2:+18057231 None:intergenic
ATTCTGAGCAAGACGATGCA+AGG 0.547923 2:+18056670 None:intergenic
AGGATCTTCATCAACTTCCA+TGG 0.554616 2:-18053616 MsG0280007611.01.T01:three_prime_UTR
TTCTTGTGGTGCTGAGTACA+GGG 0.569960 2:-18053870 MsG0280007611.01.T01:CDS
TCTTGAGCAGCCAATGCAGT+TGG 0.570997 2:-18057220 MsG0280007611.01.T01:CDS
TGAACCATTTGTTAATGCTG+AGG 0.571520 2:-18058585 MsG0280007611.01.T01:CDS
ATAATGATTGAGCTTACTCA+AGG 0.572588 2:-18056617 MsG0280007611.01.T01:CDS
TTGAGCTTCAAACAAAATCA+CGG 0.574198 2:-18053458 MsG0280007611.01.T01:three_prime_UTR
AGAATCAGAACAATGGTCAT+GGG 0.579505 2:-18053787 MsG0280007611.01.T01:three_prime_UTR
TTGTAGTTTACCATCAGCAT+AGG 0.582700 2:+18057053 None:intergenic
AAACAAAATCACGGTGAGTG+TGG 0.586386 2:-18053449 MsG0280007611.01.T01:three_prime_UTR
AGAAACTGAGGAGAAAGTGG+TGG 0.587296 2:-18058468 MsG0280007611.01.T01:CDS
ACCATTTGTTAATGCTGAGG+AGG 0.591850 2:-18058582 MsG0280007611.01.T01:CDS
TGAGACTAAAACCTCCATCA+AGG 0.593537 2:+18053698 None:intergenic
CAGTTGGCCACAGTAGCTAT+GGG 0.598216 2:-18057204 MsG0280007611.01.T01:CDS
ATACAACGGTTCCTTGATGG+AGG 0.599713 2:-18053709 MsG0280007611.01.T01:three_prime_UTR
GTTGTTACCACATGACATGC+CGG 0.606421 2:-18056595 MsG0280007611.01.T01:intron
AGACACAATCTCTCTAGCCA+TGG 0.607639 2:+18053599 None:intergenic
AGAAGAGTGGAAAGAAACTG+AGG 0.609832 2:-18058480 MsG0280007611.01.T01:CDS
AGTGCCAAGTAATCAACCAT+AGG 0.620002 2:+18058270 None:intergenic
TCTCTCAGTGCCATCAAAAG+CGG 0.620482 2:+18057306 None:intergenic
TGCTTGAGGTCCTATGCTGA+TGG 0.631116 2:-18057063 MsG0280007611.01.T01:intron
TTGGAGCTTCAACAAAATCA+CGG 0.633690 2:-18053389 MsG0280007611.01.T01:three_prime_UTR
TGTCTTACCGGCATGTCATG+TGG 0.634948 2:+18056588 None:intergenic
AGTTGATGAAGATCCTTCAA+GGG 0.637081 2:+18053623 None:intergenic
GTTGCAGAACAAGATCCGTA+AGG 0.641707 2:-18058226 MsG0280007611.01.T01:CDS
CGTTGTATAAGCGCAAGTTG+CGG 0.648636 2:+18053724 None:intergenic
TGTGGTGCTGAGTACAGGGA+CGG 0.652590 2:-18053866 MsG0280007611.01.T01:CDS
CCCTTCAAGAATCAGAACAA+TGG 0.654179 2:-18053794 MsG0280007611.01.T01:three_prime_UTR
GACGAGTCCCATAGCTACTG+TGG 0.655389 2:+18057197 None:intergenic
CAGCTCATGGAAGAATGCCA+AGG 0.660014 2:+18056743 None:intergenic
ATAAAAGAAGTCACATGACA+TGG 0.662688 2:+18053253 None:intergenic
AAGAGTTTCTCACTGAGGTG+TGG 0.662768 2:-18053281 MsG0280007611.01.T01:three_prime_UTR
GTCTTGCTCAGAATAAAAGG+TGG 0.671451 2:-18056661 MsG0280007611.01.T01:CDS
GCACCACCAATCAAAACATG+CGG 0.693064 2:+18053518 None:intergenic
GTAGAAAGAGTTTCTCACTG+AGG 0.758955 2:-18053286 MsG0280007611.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCATTAAATTAACATAAA+AGG + Chr2:18057061-18057080 None:intergenic 10.0%
!!! ATTAATTTAATAAGTTTTGT+TGG - Chr2:18056548-18056567 MsG0280007611.01.T01:intron 10.0%
!!! ATTTTCAATTTAACAATTAT+AGG + Chr2:18053619-18053638 None:intergenic 10.0%
!!! TTTTCAATTTAACAATTATA+GGG + Chr2:18053618-18053637 None:intergenic 10.0%
!! ATCAAAAGTTTCAAAATTAT+TGG + Chr2:18054435-18054454 None:intergenic 15.0%
!! ATGAATATATGTTTATAAGT+GGG + Chr2:18055712-18055731 None:intergenic 15.0%
!! ATTATTAAATTGTTTATGGT+TGG - Chr2:18056344-18056363 MsG0280007611.01.T01:intron 15.0%
!! ATTATTCTTAAAATGTAAGT+TGG + Chr2:18056838-18056857 None:intergenic 15.0%
!! CACTATTATTAAATTGTTTA+TGG - Chr2:18056340-18056359 MsG0280007611.01.T01:intron 15.0%
!! TATGAATATATGTTTATAAG+TGG + Chr2:18055713-18055732 None:intergenic 15.0%
!! TTAAATTAATGTAACCTAAA+TGG + Chr2:18056538-18056557 None:intergenic 15.0%
!!! GGTTTTTTTTTTTTTTTTGA+GGG - Chr2:18057307-18057326 MsG0280007611.01.T01:CDS 15.0%
!!! TCATTTTCTCAAATTATTAT+TGG - Chr2:18057693-18057712 MsG0280007611.01.T01:intron 15.0%
!!! TGAAAAGCTAAATAATTTTA+AGG - Chr2:18056448-18056467 MsG0280007611.01.T01:intron 15.0%
!!! TGGTTTTTTTTTTTTTTTTG+AGG - Chr2:18057306-18057325 MsG0280007611.01.T01:CDS 15.0%
!!! TTTTCATTAAATGAACAAAA+AGG + Chr2:18057163-18057182 None:intergenic 15.0%
!! AATATTTCCTTCACTTTATT+GGG - Chr2:18057370-18057389 MsG0280007611.01.T01:intron 20.0%
!! AGATTTATATGGTTAACTTT+GGG - Chr2:18057336-18057355 MsG0280007611.01.T01:CDS 20.0%
!! ATCATTTCTCATTTGTATTA+AGG + Chr2:18055769-18055788 None:intergenic 20.0%
!! CTTATCATTATCAGTTAATA+TGG + Chr2:18057437-18057456 None:intergenic 20.0%
!! GTTAACTGAAACTATTAATT+TGG + Chr2:18056979-18056998 None:intergenic 20.0%
!! TAATATTTCCTTCACTTTAT+TGG - Chr2:18057369-18057388 MsG0280007611.01.T01:intron 20.0%
!! TAGATTTATATGGTTAACTT+TGG - Chr2:18057335-18057354 MsG0280007611.01.T01:CDS 20.0%
!! TGTTCTTGTTCTTATTAATT+TGG - Chr2:18056246-18056265 MsG0280007611.01.T01:intron 20.0%
!!! AATATATCAATTGGTTTTAC+TGG - Chr2:18057244-18057263 MsG0280007611.01.T01:CDS 20.0%
!!! AGTTTGTTTATTACATGTTT+GGG + Chr2:18053890-18053909 None:intergenic 20.0%
!!! ATGTTGATAATTTTGTTCTA+AGG - Chr2:18057496-18057515 MsG0280007611.01.T01:intron 20.0%
!!! ATTGTAATTTGTATCTTGAA+TGG - Chr2:18054127-18054146 MsG0280007611.01.T01:intron 20.0%
!!! GCATATGATATTATTTTAAG+AGG - Chr2:18054224-18054243 MsG0280007611.01.T01:intron 20.0%
!!! TTTTATGTTGCTTAGAATAT+GGG - Chr2:18055411-18055430 MsG0280007611.01.T01:intron 20.0%
!!! TTTTTATGTTGCTTAGAATA+TGG - Chr2:18055410-18055429 MsG0280007611.01.T01:intron 20.0%
! AACAAACATAGTTAAAGACA+AGG + Chr2:18054323-18054342 None:intergenic 25.0%
! AACAACTAAAGCAAAAAACT+AGG - Chr2:18056193-18056212 MsG0280007611.01.T01:intron 25.0%
! AAGAAAGGAAATTCAAATCA+AGG + Chr2:18054180-18054199 None:intergenic 25.0%
! ACAAACATAGTTAAAGACAA+GGG + Chr2:18054322-18054341 None:intergenic 25.0%
! ACAACTAAAGCAAAAAACTA+GGG - Chr2:18056194-18056213 MsG0280007611.01.T01:intron 25.0%
! AGAGAAAGTAAAAGAAGAAA+AGG - Chr2:18058542-18058561 MsG0280007611.01.T01:CDS 25.0%
! AGCAACATAAAAATATCAAG+TGG + Chr2:18055403-18055422 None:intergenic 25.0%
! AGGTTATATTTCATTCAATG+TGG - Chr2:18055502-18055521 MsG0280007611.01.T01:intron 25.0%
! AGTAAATTAAATGTGCTGTA+TGG - Chr2:18056280-18056299 MsG0280007611.01.T01:intron 25.0%
! ATATCATATTCCATTCAATG+TGG - Chr2:18055730-18055749 MsG0280007611.01.T01:intron 25.0%
! ATCAGTTAATATGGTATCAA+AGG + Chr2:18057428-18057447 None:intergenic 25.0%
! ATCTAAATAAAATATGGCAC+TGG + Chr2:18057281-18057300 None:intergenic 25.0%
! ATGCTAAAGAAACTAAACAA+GGG + Chr2:18054208-18054227 None:intergenic 25.0%
! CAAAATTATCAACATGCAAA+TGG + Chr2:18057491-18057510 None:intergenic 25.0%
! GAGGGAAATTTAGATTTATA+TGG - Chr2:18057325-18057344 MsG0280007611.01.T01:CDS 25.0%
! GGAATGAAATCACTTAAATT+AGG - Chr2:18057112-18057131 MsG0280007611.01.T01:CDS 25.0%
! GGTTATATTTCATTCAATGT+GGG - Chr2:18055503-18055522 MsG0280007611.01.T01:intron 25.0%
! TAACTATGTTTGTTTGAATG+TGG - Chr2:18054329-18054348 MsG0280007611.01.T01:intron 25.0%
! TAAGCTTATAAGCAATACAT+AGG + Chr2:18056770-18056789 None:intergenic 25.0%
! TATCATATTCCATTCAATGT+GGG - Chr2:18055731-18055750 MsG0280007611.01.T01:intron 25.0%
! TATGCTAAAGAAACTAAACA+AGG + Chr2:18054209-18054228 None:intergenic 25.0%
! TATGTATTGCTTATAAGCTT+AGG - Chr2:18056769-18056788 MsG0280007611.01.T01:CDS 25.0%
! TCAAAAGAAGAGGAAAATAA+AGG - Chr2:18055874-18055893 MsG0280007611.01.T01:intron 25.0%
! TCAGTAAGAATGTTCTTTAA+GGG - Chr2:18053282-18053301 MsG0280007611.01.T01:three_prime_UTR 25.0%
! TCAGTTAATATGGTATCAAA+GGG + Chr2:18057427-18057446 None:intergenic 25.0%
! TGATTCAGTAATTGATCTTA+AGG - Chr2:18053539-18053558 MsG0280007611.01.T01:three_prime_UTR 25.0%
! TGATTCTGAGTTGTTATATA+AGG - Chr2:18053508-18053527 MsG0280007611.01.T01:three_prime_UTR 25.0%
! TGATTTGAATTTCCTTTCTT+TGG - Chr2:18054180-18054199 MsG0280007611.01.T01:intron 25.0%
! TTAATGAATATGATCAGTAC+TGG - Chr2:18056870-18056889 MsG0280007611.01.T01:intron 25.0%
! TTACACTTCATACTTTGATT+AGG - Chr2:18055294-18055313 MsG0280007611.01.T01:intron 25.0%
! TTCAGTAAGAATGTTCTTTA+AGG - Chr2:18053281-18053300 MsG0280007611.01.T01:three_prime_UTR 25.0%
!! AAACTATTAATTTGGTAGAG+AGG + Chr2:18056971-18056990 None:intergenic 25.0%
!! AGTATATGTTTTCTGAACAA+GGG - Chr2:18056107-18056126 MsG0280007611.01.T01:intron 25.0%
!! CTACAAATGATTTTACATTG+AGG + Chr2:18058054-18058073 None:intergenic 25.0%
!! GAGTTTGTTTATTACATGTT+TGG + Chr2:18053891-18053910 None:intergenic 25.0%
!! TAGTATATGTTTTCTGAACA+AGG - Chr2:18056106-18056125 MsG0280007611.01.T01:intron 25.0%
!! TCTTATTAATTTGGTTGCAT+AGG - Chr2:18056255-18056274 MsG0280007611.01.T01:intron 25.0%
!! TTTCATGTGTCTAAATTTTC+AGG - Chr2:18057785-18057804 MsG0280007611.01.T01:intron 25.0%
!!! AAAGTATTTTGCATTAGCTT+GGG - Chr2:18056622-18056641 MsG0280007611.01.T01:CDS 25.0%
!!! AATATTATTTCTACAGCAAC+TGG - Chr2:18053743-18053762 MsG0280007611.01.T01:three_prime_UTR 25.0%
!!! CAAATTATTATTGGTGTCAT+CGG - Chr2:18057702-18057721 MsG0280007611.01.T01:intron 25.0%
!!! CACAAAATACATTGTTTCTA+GGG + Chr2:18057197-18057216 None:intergenic 25.0%
!!! TAAAGTTTTGGTCAATTCTT+GGG - Chr2:18054055-18054074 MsG0280007611.01.T01:intron 25.0%
!!! TATTGCTTACTCTAAAGTTT+TGG - Chr2:18054043-18054062 MsG0280007611.01.T01:intron 25.0%
!!! TATTTTTGTCGTCAGTTTTT+AGG - Chr2:18053961-18053980 MsG0280007611.01.T01:intron 25.0%
!!! TTAATAAGTTTTGTTGGTGT+AGG - Chr2:18056554-18056573 MsG0280007611.01.T01:intron 25.0%
AAACTCTTTCTACAAGTGAT+TGG + Chr2:18058405-18058424 None:intergenic 30.0%
AAGGTTCATGGATATGTATA+AGG - Chr2:18058493-18058512 MsG0280007611.01.T01:CDS 30.0%
AATAAGTCCCAATAAAGTGA+AGG + Chr2:18057380-18057399 None:intergenic 30.0%
ACACTTTAAACAGACATACA+CGG + Chr2:18053934-18053953 None:intergenic 30.0%
ACAGAGTTAAGAGTTAATAG+AGG + Chr2:18054281-18054300 None:intergenic 30.0%
AGAACAGAACAATTCAGAAA+TGG + Chr2:18054824-18054843 None:intergenic 30.0%
AGATCACTAGGTAATTAGTT+GGG - Chr2:18056062-18056081 MsG0280007611.01.T01:intron 30.0%
ATAAAAGAAGTCACATGACA+TGG + Chr2:18058448-18058467 None:intergenic 30.0%
ATAATGATTGAGCTTACTCA+AGG - Chr2:18055081-18055100 MsG0280007611.01.T01:intron 30.0%
ATCAAATCTTCCTCCTATAA+GGG - Chr2:18053374-18053393 MsG0280007611.01.T01:three_prime_UTR 30.0%
ATGAAAACAACCTATTACAC+AGG + Chr2:18053860-18053879 None:intergenic 30.0%
ATTTCATTCCATCTTGGATT+TGG + Chr2:18057102-18057121 None:intergenic 30.0%
CAACTAAAGCAAAAAACTAG+GGG - Chr2:18056195-18056214 MsG0280007611.01.T01:intron 30.0%
CAATTGATATATTAGTACGC+CGG + Chr2:18057237-18057256 None:intergenic 30.0%
CAATTGATATCTTTGACCTA+AGG - Chr2:18058474-18058493 MsG0280007611.01.T01:CDS 30.0%
CAGTAAGAATGTTCTTTAAG+GGG - Chr2:18053283-18053302 MsG0280007611.01.T01:three_prime_UTR 30.0%
CATTTCAAGGTAATCATCAT+TGG + Chr2:18054593-18054612 None:intergenic 30.0%
CTAATGTGCTTATAAGTAAG+AGG + Chr2:18055484-18055503 None:intergenic 30.0%
CTCATAAGCCTTAGTAATTT+GGG - Chr2:18055341-18055360 MsG0280007611.01.T01:intron 30.0%
CTCTTACTTATAAGCACATT+AGG - Chr2:18055482-18055501 MsG0280007611.01.T01:intron 30.0%
GACAATAAAATCTTTCTGAC+TGG + Chr2:18054802-18054821 None:intergenic 30.0%
GATAACAGCTGAGAAAAATT+TGG - Chr2:18054364-18054383 MsG0280007611.01.T01:intron 30.0%
GTGTTGAAAATTCAACTTCA+GGG - Chr2:18053319-18053338 MsG0280007611.01.T01:three_prime_UTR 30.0%
TAAGTGATTTCATTCCATCT+TGG + Chr2:18057108-18057127 None:intergenic 30.0%
TATAAAGAGTTGTGTCTTAC+CGG + Chr2:18055125-18055144 None:intergenic 30.0%
TATACATATCCATGAACCTT+AGG + Chr2:18058493-18058512 None:intergenic 30.0%
TCTCATAAGCCTTAGTAATT+TGG - Chr2:18055340-18055359 MsG0280007611.01.T01:intron 30.0%
TGCTAAAGAAACTAAACAAG+GGG + Chr2:18054207-18054226 None:intergenic 30.0%
TGTCTGCTTATGTTATACTA+AGG + Chr2:18057593-18057612 None:intergenic 30.0%
TTGAGCTTCAAACAAAATCA+CGG - Chr2:18058240-18058259 MsG0280007611.01.T01:CDS 30.0%
TTTAAGGGGTTATCAATTAC+TGG - Chr2:18053297-18053316 MsG0280007611.01.T01:three_prime_UTR 30.0%
TTTATGGTTGGAGAGATAAA+AGG - Chr2:18056356-18056375 MsG0280007611.01.T01:intron 30.0%
! AAACATGTCAATGTGCATTT+TGG - Chr2:18057860-18057879 MsG0280007611.01.T01:intron 30.0%
! AAAGCTTGATTTTTATGCTG+AGG - Chr2:18053403-18053422 MsG0280007611.01.T01:three_prime_UTR 30.0%
! ACAATGTATTTTGTGCTCAA+CGG - Chr2:18057202-18057221 MsG0280007611.01.T01:CDS 30.0%
! AGTTGTTTCATAAGCTATCA+TGG - Chr2:18053800-18053819 MsG0280007611.01.T01:three_prime_UTR 30.0%
! CAAATGATTTTACATTGAGG+AGG + Chr2:18058051-18058070 None:intergenic 30.0%
! GACAATATTTGCTTCTGAAA+GGG + Chr2:18054780-18054799 None:intergenic 30.0%
! GCACAAAATACATTGTTTCT+AGG + Chr2:18057198-18057217 None:intergenic 30.0%
! TGAAAATGAAAAGAAAGTGC+TGG - Chr2:18055145-18055164 MsG0280007611.01.T01:intron 30.0%
! TGATATTGCACAACCATTTT+TGG + Chr2:18055916-18055935 None:intergenic 30.0%
! TGTAGCTTTTGCAAAAATCA+CGG + Chr2:18058217-18058236 None:intergenic 30.0%
!! AAAGGGATATAGCTCTAAAA+AGG + Chr2:18057410-18057429 None:intergenic 30.0%
!! AACCATTTTTGGGAAACTTT+TGG + Chr2:18055905-18055924 None:intergenic 30.0%
!! ACCATTTTTGGGAAACTTTT+GGG + Chr2:18055904-18055923 None:intergenic 30.0%
!! CTAAAGTTTTGGTCAATTCT+TGG - Chr2:18054054-18054073 MsG0280007611.01.T01:intron 30.0%
!! CTTCTCATGTTTTACTTTTG+TGG - Chr2:18053988-18054007 MsG0280007611.01.T01:intron 30.0%
!! GAACTAGTTTGTTTGTGATT+TGG - Chr2:18058580-18058599 MsG0280007611.01.T01:CDS 30.0%
!! GATATTGCACAACCATTTTT+GGG + Chr2:18055915-18055934 None:intergenic 30.0%
!! GCATTACATGGATATTTTAG+TGG - Chr2:18056378-18056397 MsG0280007611.01.T01:intron 30.0%
!! TGTTTTTGTCTCAAAAGAAG+AGG - Chr2:18055864-18055883 MsG0280007611.01.T01:intron 30.0%
!!! GAAAGTATTTTGCATTAGCT+TGG - Chr2:18056621-18056640 MsG0280007611.01.T01:CDS 30.0%
!!! TAGTTTTGTATGGTTGAGTT+AGG - Chr2:18056811-18056830 MsG0280007611.01.T01:intron 30.0%
!!! TATCAATTGGTTTTACTGGA+AGG - Chr2:18057248-18057267 MsG0280007611.01.T01:CDS 30.0%
AAAAATCACGGTACACATTG+TGG + Chr2:18058205-18058224 None:intergenic 35.0%
AAGAATCAGAACAATGGTCA+TGG - Chr2:18057910-18057929 MsG0280007611.01.T01:intron 35.0%
AAGGTTCAATCCTACATTCA+AGG + Chr2:18057144-18057163 None:intergenic 35.0%
AATCATTTGTAGACCCTTGA+AGG - Chr2:18058062-18058081 MsG0280007611.01.T01:intron 35.0%
AATGCATCTGGTCAGATTTA+GGG + Chr2:18055276-18055295 None:intergenic 35.0%
AATGTTGTCAAGTCCCTATA+AGG - Chr2:18054666-18054685 MsG0280007611.01.T01:intron 35.0%
ACCATTGTTCTGATTCTTGA+AGG + Chr2:18057908-18057927 None:intergenic 35.0%
ACCCAAATCCCAAATTACTA+AGG + Chr2:18055352-18055371 None:intergenic 35.0%
AGAATCAGAACAATGGTCAT+GGG - Chr2:18057911-18057930 MsG0280007611.01.T01:intron 35.0%
AGAGGAATTAAGTGCATAAC+AGG + Chr2:18056953-18056972 None:intergenic 35.0%
AGGTTCAATCCTACATTCAA+GGG + Chr2:18057143-18057162 None:intergenic 35.0%
AGTATGAAGTGTAATGCATC+TGG + Chr2:18055288-18055307 None:intergenic 35.0%
ATAATGCAGGTGGAATAACA+TGG + Chr2:18056679-18056698 None:intergenic 35.0%
ATAATGTCTAACACATGTCG+TGG - Chr2:18057655-18057674 MsG0280007611.01.T01:intron 35.0%
ATAGAGGTTATGTCAAAGCA+TGG + Chr2:18054265-18054284 None:intergenic 35.0%
ATCGTCTTGCTCAGAATAAA+AGG - Chr2:18055034-18055053 MsG0280007611.01.T01:intron 35.0%
ATCTATGTAGCACTATGAAG+TGG - Chr2:18057624-18057643 MsG0280007611.01.T01:intron 35.0%
ATGCACATTGACATGTTTGT+TGG + Chr2:18057858-18057877 None:intergenic 35.0%
CAGATCACTAGGTAATTAGT+TGG - Chr2:18056061-18056080 MsG0280007611.01.T01:intron 35.0%
CATCAAATCTTCCTCCTATA+AGG - Chr2:18053373-18053392 MsG0280007611.01.T01:three_prime_UTR 35.0%
CCATTGTTCTGATTCTTGAA+GGG + Chr2:18057907-18057926 None:intergenic 35.0%
CGGCGTACTAATATATCAAT+TGG - Chr2:18057235-18057254 MsG0280007611.01.T01:CDS 35.0%
GAATGTGTGTGAACATTTCA+AGG + Chr2:18054606-18054625 None:intergenic 35.0%
GATTTGGCAAAACTACACTT+TGG - Chr2:18058290-18058309 MsG0280007611.01.T01:CDS 35.0%
GGAAGGTGAGTATATGTATA+GGG + Chr2:18055195-18055214 None:intergenic 35.0%
GGACAATATTTGCTTCTGAA+AGG + Chr2:18054781-18054800 None:intergenic 35.0%
GGTTGTGCAATATCATTTCT+CGG - Chr2:18055921-18055940 MsG0280007611.01.T01:intron 35.0%
TAATGCATCTGGTCAGATTT+AGG + Chr2:18055277-18055296 None:intergenic 35.0%
TAGATTACATCGAGTACACT+AGG + Chr2:18056012-18056031 None:intergenic 35.0%
TATCTTTGACCTAAGGTTCA+TGG - Chr2:18058481-18058500 MsG0280007611.01.T01:CDS 35.0%
TCCCAAAAGTTTCCCAAAAA+TGG - Chr2:18055900-18055919 MsG0280007611.01.T01:intron 35.0%
TGAAGAATTTCAGAGTTTGC+CGG - Chr2:18054978-18054997 MsG0280007611.01.T01:intron 35.0%
TGGAAGAAAAGATTTGCACT+CGG + Chr2:18054729-18054748 None:intergenic 35.0%
TTACTAAGGCTTATGAGATG+AGG + Chr2:18055338-18055357 None:intergenic 35.0%
TTATCAACATGCAAATGGCA+AGG + Chr2:18057486-18057505 None:intergenic 35.0%
TTCCAAAAGTTGTCGCAAAA+TGG + Chr2:18055802-18055821 None:intergenic 35.0%
TTGGAGCTTCAACAAAATCA+CGG - Chr2:18058309-18058328 MsG0280007611.01.T01:intron 35.0%
TTGTAGTTTACCATCAGCAT+AGG + Chr2:18054648-18054667 None:intergenic 35.0%
TTTCTACAAGTGATTGGATG+AGG + Chr2:18058399-18058418 None:intergenic 35.0%
! AACCATTTTGCGACAACTTT+TGG - Chr2:18055797-18055816 MsG0280007611.01.T01:intron 35.0%
! AATTCAACTTCAGGGTTTTC+TGG - Chr2:18053327-18053346 MsG0280007611.01.T01:three_prime_UTR 35.0%
! AGCAATTTTTCACCAGTTAC+CGG + Chr2:18054533-18054552 None:intergenic 35.0%
! AGCCTTAGTAATTTGGGATT+TGG - Chr2:18055347-18055366 MsG0280007611.01.T01:intron 35.0%
! ATGATTTTACATTGAGGAGG+AGG + Chr2:18058048-18058067 None:intergenic 35.0%
! ATGTTGCTTAGAATATGGGT+TGG - Chr2:18055415-18055434 MsG0280007611.01.T01:intron 35.0%
! CAGTGAAAGCATAAACCTTA+CGG + Chr2:18053490-18053509 None:intergenic 35.0%
! CCATACAAAACTAGCTTGTA+AGG + Chr2:18056804-18056823 None:intergenic 35.0%
! CTGATACCAGCTTAGAATTT+TGG - Chr2:18055623-18055642 MsG0280007611.01.T01:intron 35.0%
! GACATTTTCCAAATCCAAGA+TGG - Chr2:18057091-18057110 MsG0280007611.01.T01:CDS 35.0%
! GCCTTAGTAATTTGGGATTT+GGG - Chr2:18055348-18055367 MsG0280007611.01.T01:intron 35.0%
! GGTGTTGAAAATTCAACTTC+AGG - Chr2:18053318-18053337 MsG0280007611.01.T01:three_prime_UTR 35.0%
! TCGAATTGATTCAGATCACT+AGG - Chr2:18056050-18056069 MsG0280007611.01.T01:intron 35.0%
! TGAACCATTTGTTAATGCTG+AGG - Chr2:18053113-18053132 MsG0280007611.01.T01:three_prime_UTR 35.0%
! TGTTGCTTAGAATATGGGTT+GGG - Chr2:18055416-18055435 MsG0280007611.01.T01:intron 35.0%
!! AAGTTGATGAAGATCCTTCA+AGG + Chr2:18058079-18058098 None:intergenic 35.0%
!! AGTTGATGAAGATCCTTCAA+GGG + Chr2:18058078-18058097 None:intergenic 35.0%
!! GAGAGATAAAAGGCATTACA+TGG - Chr2:18056366-18056385 MsG0280007611.01.T01:intron 35.0%
!! TACCAGCTTAGAATTTTGGT+TGG - Chr2:18055627-18055646 MsG0280007611.01.T01:intron 35.0%
!! TATTTTGCATTAGCTTGGGA+TGG - Chr2:18056626-18056645 MsG0280007611.01.T01:CDS 35.0%
!! TTCTGGAATTGGAGTGTTTA+TGG - Chr2:18053344-18053363 MsG0280007611.01.T01:three_prime_UTR 35.0%
!!! CAAGGCTATTTTTTGAATCG+TGG + Chr2:18057468-18057487 None:intergenic 35.0%
!!! CCTTACAAGCTAGTTTTGTA+TGG - Chr2:18056801-18056820 MsG0280007611.01.T01:intron 35.0%
!!! CTTAGAATTTTGGTTGGACT+TGG - Chr2:18055633-18055652 MsG0280007611.01.T01:intron 35.0%
!!! CTTATACCGCATGTTTTGAT+TGG - Chr2:18058174-18058193 MsG0280007611.01.T01:intron 35.0%
!!! TGTGTCTAAATTTTCAGGTG+CGG - Chr2:18057790-18057809 MsG0280007611.01.T01:intron 35.0%
AAACAAAATCACGGTGAGTG+TGG - Chr2:18058249-18058268 MsG0280007611.01.T01:CDS 40.0%
AACAGACATACACGGTTGTT+TGG + Chr2:18053926-18053945 None:intergenic 40.0%
AAGGTAATCATCATTGGCAC+TGG + Chr2:18054587-18054606 None:intergenic 40.0%
AAGTAACCAAACTGCCTATG+TGG + Chr2:18055242-18055261 None:intergenic 40.0%
AATCTATGTCCTATTGCTGC+AGG - Chr2:18056026-18056045 MsG0280007611.01.T01:intron 40.0%
AGAAGAGTGGAAAGAAACTG+AGG - Chr2:18053218-18053237 MsG0280007611.01.T01:three_prime_UTR 40.0%
AGAGATTCGAAGGAGATGAA+TGG + Chr2:18054749-18054768 None:intergenic 40.0%
AGCTTATCCAAAATTCGCTG+TGG + Chr2:18055603-18055622 None:intergenic 40.0%
AGGATCTTCATCAACTTCCA+TGG - Chr2:18058082-18058101 MsG0280007611.01.T01:intron 40.0%
AGTGCCAAGTAATCAACCAT+AGG + Chr2:18053431-18053450 None:intergenic 40.0%
ATAAACACTCGCAAGGATCA+AGG + Chr2:18054847-18054866 None:intergenic 40.0%
ATGCATCTGGTCAGATTTAG+GGG + Chr2:18055275-18055294 None:intergenic 40.0%
ATGTCTAATCCGGATTGTGA+GGG - Chr2:18056710-18056729 MsG0280007611.01.T01:CDS 40.0%
ATTACTTGGCACTCATGGAT+GGG - Chr2:18053438-18053457 MsG0280007611.01.T01:three_prime_UTR 40.0%
ATTGCAGATAAACACTCGCA+AGG + Chr2:18054854-18054873 None:intergenic 40.0%
CATTCTGTTCACATTGCTTG+AGG - Chr2:18054621-18054640 MsG0280007611.01.T01:intron 40.0%
CCCTTCAAGAATCAGAACAA+TGG - Chr2:18057904-18057923 MsG0280007611.01.T01:intron 40.0%
CGGAAGGTGAGTATATGTAT+AGG + Chr2:18055196-18055215 None:intergenic 40.0%
CTAACTCAATCCCACAAAAG+TGG - Chr2:18055665-18055684 MsG0280007611.01.T01:intron 40.0%
CTAGGTAATTAGTTGGGACT+AGG - Chr2:18056068-18056087 MsG0280007611.01.T01:intron 40.0%
CTGAAATTCTTCACAGCTCA+TGG + Chr2:18054971-18054990 None:intergenic 40.0%
CTTATACAACGGTTCCTTGA+TGG - Chr2:18057986-18058005 MsG0280007611.01.T01:intron 40.0%
GAAAGAAACTGAGGAGAAAG+TGG - Chr2:18053227-18053246 MsG0280007611.01.T01:three_prime_UTR 40.0%
GAGAAGAAGAACAAGAAGAG+TGG - Chr2:18053205-18053224 MsG0280007611.01.T01:three_prime_UTR 40.0%
GAGATACAATATCTGCATCC+TGG + Chr2:18054701-18054720 None:intergenic 40.0%
GAGTAGTTGTGATGCATGTT+CGG + Chr2:18055216-18055235 None:intergenic 40.0%
GAGTGTTTATCTGCAATGGA+CGG - Chr2:18054857-18054876 MsG0280007611.01.T01:intron 40.0%
GGAAGAAAAGATTTGCACTC+GGG + Chr2:18054728-18054747 None:intergenic 40.0%
GTAGAAAGAGTTTCTCACTG+AGG - Chr2:18058412-18058431 MsG0280007611.01.T01:intron 40.0%
GTATCTCTCACCTTATAAGC+CGG + Chr2:18055462-18055481 None:intergenic 40.0%
GTCCAACCAAAATTCTAAGC+TGG + Chr2:18055632-18055651 None:intergenic 40.0%
GTCTTGCTCAGAATAAAAGG+TGG - Chr2:18055037-18055056 MsG0280007611.01.T01:intron 40.0%
TAAACAAGGGGTCCAAAGAA+AGG + Chr2:18054195-18054214 None:intergenic 40.0%
TAGTGTGACCTATGAAGCAA+TGG + Chr2:18057759-18057778 None:intergenic 40.0%
TCCTCCTCAGCATTAACAAA+TGG + Chr2:18053120-18053139 None:intergenic 40.0%
TGAGACTAAAACCTCCATCA+AGG + Chr2:18058003-18058022 None:intergenic 40.0%
TTGCGAGTGTTTATCTGCAA+TGG - Chr2:18054853-18054872 MsG0280007611.01.T01:intron 40.0%
! AAGCTTTTCTGCACCCTTAT+AGG + Chr2:18053390-18053409 None:intergenic 40.0%
! ACCATTTGTTAATGCTGAGG+AGG - Chr2:18053116-18053135 MsG0280007611.01.T01:three_prime_UTR 40.0%
! ACTTTTGTGGATGAACTCTG+AGG - Chr2:18054001-18054020 MsG0280007611.01.T01:intron 40.0%
! ATGTATTTTGTGCTCAACGG+TGG - Chr2:18057205-18057224 MsG0280007611.01.T01:CDS 40.0%
! ATTAGGCGTATCCTTCCTTT+TGG - Chr2:18055311-18055330 MsG0280007611.01.T01:intron 40.0%
! ATTTGTTAATGCTGAGGAGG+AGG - Chr2:18053119-18053138 MsG0280007611.01.T01:three_prime_UTR 40.0%
! CACTTTTGTGGGATTGAGTT+AGG + Chr2:18055667-18055686 None:intergenic 40.0%
! TTAGGCGTATCCTTCCTTTT+GGG - Chr2:18055312-18055331 MsG0280007611.01.T01:intron 40.0%
! TTTTTATGCTGAGGAGCCTA+TGG - Chr2:18053412-18053431 MsG0280007611.01.T01:three_prime_UTR 40.0%
!! ATAGATTACGTGCCGGTTTA+AGG - Chr2:18056577-18056596 MsG0280007611.01.T01:intron 40.0%
!!! ACCTTACAAGCCACTTTTGT+GGG + Chr2:18055678-18055697 None:intergenic 40.0%
!!! ACTTCAGGGTTTTCTGGAAT+TGG - Chr2:18053333-18053352 MsG0280007611.01.T01:three_prime_UTR 40.0%
!!! ATACCGCATGTTTTGATTGG+TGG - Chr2:18058177-18058196 MsG0280007611.01.T01:intron 40.0%
AAGAGTTTCTCACTGAGGTG+TGG - Chr2:18058417-18058436 MsG0280007611.01.T01:intron 45.0%
AGAAACTGAGGAGAAAGTGG+TGG - Chr2:18053230-18053249 MsG0280007611.01.T01:three_prime_UTR 45.0%
AGACACAATCTCTCTAGCCA+TGG + Chr2:18058102-18058121 None:intergenic 45.0%
AGTAGCAGCGAAGAATGAAC+AGG - Chr2:18056898-18056917 MsG0280007611.01.T01:intron 45.0%
AGTTGTGATGCATGTTCGGA+AGG + Chr2:18055212-18055231 None:intergenic 45.0%
ATACAACGGTTCCTTGATGG+AGG - Chr2:18057989-18058008 MsG0280007611.01.T01:intron 45.0%
ATGAAGCAATGGCATGGACA+TGG + Chr2:18057748-18057767 None:intergenic 45.0%
ATGTCGATCATGGACATGAG+AGG + Chr2:18055543-18055562 None:intergenic 45.0%
ATTCTGAGCAAGACGATGCA+AGG + Chr2:18055031-18055050 None:intergenic 45.0%
ATTTCAGAGTTTGCCGGAAG+AGG - Chr2:18054984-18055003 MsG0280007611.01.T01:intron 45.0%
CAATATCTGCATCCTGGTTG+AGG + Chr2:18054695-18054714 None:intergenic 45.0%
CAATTCGAACCTGCAGCAAT+AGG + Chr2:18056038-18056057 None:intergenic 45.0%
CACAACTACTCTTGCCACAT+AGG - Chr2:18055225-18055244 MsG0280007611.01.T01:intron 45.0%
CACGAGTTCTGCTATTCTTG+TGG - Chr2:18057814-18057833 MsG0280007611.01.T01:intron 45.0%
CACGCTTCAGATGTCTAATC+CGG - Chr2:18056700-18056719 MsG0280007611.01.T01:CDS 45.0%
CATGGGAGACTCTATGATCA+TGG - Chr2:18057928-18057947 MsG0280007611.01.T01:intron 45.0%
CCTAAATGGCTGATCATCTC+AGG + Chr2:18056524-18056543 None:intergenic 45.0%
CCTGAGATGATCAGCCATTT+AGG - Chr2:18056521-18056540 MsG0280007611.01.T01:intron 45.0%
CGCAACTTGCGCTTATACAA+CGG - Chr2:18057975-18057994 MsG0280007611.01.T01:intron 45.0%
CGTTGTATAAGCGCAAGTTG+CGG + Chr2:18057977-18057996 None:intergenic 45.0%
CTGGTTGAGGACACCTTATA+GGG + Chr2:18054682-18054701 None:intergenic 45.0%
CTGTTGAGTCCCACATTGAA+TGG + Chr2:18055743-18055762 None:intergenic 45.0%
CTTATGAGATGAGGCCCAAA+AGG + Chr2:18055329-18055348 None:intergenic 45.0%
GACCACTTCTGCAAGTTAGT+TGG + Chr2:18056499-18056518 None:intergenic 45.0%
GACTTGAGTGGTCTGATAGT+GGG - Chr2:18055572-18055591 MsG0280007611.01.T01:intron 45.0%
GAGAGAAGAGGATGTAGGAT+TGG - Chr2:18056409-18056428 MsG0280007611.01.T01:intron 45.0%
GATGTCTAATCCGGATTGTG+AGG - Chr2:18056709-18056728 MsG0280007611.01.T01:CDS 45.0%
GATGTGAGAGAAGAGGATGT+AGG - Chr2:18056404-18056423 MsG0280007611.01.T01:intron 45.0%
GATTACTTGGCACTCATGGA+TGG - Chr2:18053437-18053456 MsG0280007611.01.T01:three_prime_UTR 45.0%
GCACCACCAATCAAAACATG+CGG + Chr2:18058183-18058202 None:intergenic 45.0%
GCAGAAAACCTCTGACAAAC+AGG + Chr2:18054920-18054939 None:intergenic 45.0%
GCATAGAGCTCACCTTAAAC+CGG + Chr2:18056592-18056611 None:intergenic 45.0%
GCATCACGATGTCTGTGATT+TGG - Chr2:18058274-18058293 MsG0280007611.01.T01:CDS 45.0%
GGACGGTTCATCTAGTCAAT+CGG - Chr2:18054874-18054893 MsG0280007611.01.T01:intron 45.0%
GGAGCCTATGGTTGATTACT+TGG - Chr2:18053424-18053443 MsG0280007611.01.T01:three_prime_UTR 45.0%
GGTTGATTACTTGGCACTCA+TGG - Chr2:18053433-18053452 MsG0280007611.01.T01:three_prime_UTR 45.0%
GTCATATCTCTAGTCGACGT+GGG + Chr2:18056748-18056767 None:intergenic 45.0%
GTGGATAGATGTGAGAGAAG+AGG - Chr2:18056397-18056416 MsG0280007611.01.T01:intron 45.0%
GTGTAGGATAGATTACGTGC+CGG - Chr2:18056570-18056589 MsG0280007611.01.T01:intron 45.0%
GTTGCAGAACAAGATCCGTA+AGG - Chr2:18053472-18053491 MsG0280007611.01.T01:three_prime_UTR 45.0%
GTTGTTACCACATGACATGC+CGG - Chr2:18055103-18055122 MsG0280007611.01.T01:intron 45.0%
TAGGCTCAACCCTTGAATGT+AGG - Chr2:18057131-18057150 MsG0280007611.01.T01:CDS 45.0%
TCTCTCAGTGCCATCAAAAG+CGG + Chr2:18054395-18054414 None:intergenic 45.0%
TGACCTATGAAGCAATGGCA+TGG + Chr2:18057754-18057773 None:intergenic 45.0%
TGACTTGAGTGGTCTGATAG+TGG - Chr2:18055571-18055590 MsG0280007611.01.T01:intron 45.0%
TGAGCGTATGCCTGTGTAAT+AGG - Chr2:18053847-18053866 MsG0280007611.01.T01:CDS 45.0%
TGTCCATGCCATTGCTTCAT+AGG - Chr2:18057748-18057767 MsG0280007611.01.T01:intron 45.0%
TGTCGATCATGGACATGAGA+GGG + Chr2:18055542-18055561 None:intergenic 45.0%
TTACATTGAGGAGGAGGAGA+TGG + Chr2:18058042-18058061 None:intergenic 45.0%
! ACCTTATAAGCCGGTTTCGT+AGG + Chr2:18055453-18055472 None:intergenic 45.0%
! ATCTGAAGCGTGGATAATGC+AGG + Chr2:18056692-18056711 None:intergenic 45.0%
! ATTCTTGTGGTGCTGAGTAC+AGG - Chr2:18057827-18057846 MsG0280007611.01.T01:intron 45.0%
! CAAAAGTGGCTTGTAAGGTG+AGG - Chr2:18055679-18055698 MsG0280007611.01.T01:intron 45.0%
! CCTTATAAGCCGGTTTCGTA+GGG + Chr2:18055452-18055471 None:intergenic 45.0%
! CTTTTCTGCACCCTTATAGG+AGG + Chr2:18053387-18053406 None:intergenic 45.0%
! TCCCACAAAAGTGGCTTGTA+AGG - Chr2:18055674-18055693 MsG0280007611.01.T01:intron 45.0%
! TGCCAACTAACTTGCAGAAG+TGG - Chr2:18056494-18056513 MsG0280007611.01.T01:intron 45.0%
! TTCTTGTGGTGCTGAGTACA+GGG - Chr2:18057828-18057847 MsG0280007611.01.T01:intron 45.0%
! TTGTCAGAGGTTTTCTGCGT+GGG - Chr2:18054922-18054941 MsG0280007611.01.T01:intron 45.0%
! TTTGTCAGAGGTTTTCTGCG+TGG - Chr2:18054921-18054940 MsG0280007611.01.T01:intron 45.0%
!! TTTTGATGGCACTGAGAGAG+AGG - Chr2:18054396-18054415 MsG0280007611.01.T01:intron 45.0%
!!! CACCTTACAAGCCACTTTTG+TGG + Chr2:18055679-18055698 None:intergenic 45.0%
!!! TATGGGACTCGTCACTTTTC+CGG - Chr2:18054511-18054530 MsG0280007611.01.T01:intron 45.0%
!!! TTTGGACATGCCGCTTTTGA+TGG - Chr2:18054382-18054401 MsG0280007611.01.T01:intron 45.0%
!! ATATAAATCTAAATAAAATA+TGG + Chr2:18057287-18057306 None:intergenic 5.0%
!!! ATATTTTATTTAGATTTATA+TGG - Chr2:18057286-18057305 MsG0280007611.01.T01:CDS 5.0%
ATTGAGGAGGAGGAGATGGT+AGG + Chr2:18058038-18058057 None:intergenic 50.0%
CAGCTCATGGAAGAATGCCA+AGG + Chr2:18054958-18054977 None:intergenic 50.0%
CAGTTGGCCACAGTAGCTAT+GGG - Chr2:18054494-18054513 MsG0280007611.01.T01:intron 50.0%
CATGGACACTAAGCACACCA+TGG + Chr2:18057730-18057749 None:intergenic 50.0%
CCTGGTTGAGGACACCTTAT+AGG + Chr2:18054683-18054702 None:intergenic 50.0%
CTAACGCAACCCTACGAAAC+CGG - Chr2:18055440-18055459 MsG0280007611.01.T01:intron 50.0%
CTCAACACTCCCTCACAATC+CGG + Chr2:18056722-18056741 None:intergenic 50.0%
CTCTTGCCACATAGGCAGTT+TGG - Chr2:18055233-18055252 MsG0280007611.01.T01:intron 50.0%
GGCTGCTCAAGATCAATGCT+TGG + Chr2:18054470-18054489 None:intergenic 50.0%
GGCTTTCTCGAGAGATTCGA+AGG + Chr2:18054759-18054778 None:intergenic 50.0%
GGGCGTGCTTAAACTAGCAA+TGG - Chr2:18054075-18054094 MsG0280007611.01.T01:intron 50.0%
GGTCATATCTCTAGTCGACG+TGG + Chr2:18056749-18056768 None:intergenic 50.0%
GTCAGATTTAGGGGAGAGGT+GGG + Chr2:18055266-18055285 None:intergenic 50.0%
GTCGATCATGGACATGAGAG+GGG + Chr2:18055541-18055560 None:intergenic 50.0%
TCAGATTTAGGGGAGAGGTG+GGG + Chr2:18055265-18055284 None:intergenic 50.0%
TCGAGTGTCCTGTTTGTCAG+AGG - Chr2:18054909-18054928 MsG0280007611.01.T01:intron 50.0%
TCTGGTCAGATTTAGGGGAG+AGG + Chr2:18055270-18055289 None:intergenic 50.0%
TCTTGAGCAGCCAATGCAGT+TGG - Chr2:18054478-18054497 MsG0280007611.01.T01:intron 50.0%
TGAAGCGTGGATAATGCAGG+TGG + Chr2:18056689-18056708 None:intergenic 50.0%
TGAGATGAGGCCCAAAAGGA+AGG + Chr2:18055325-18055344 None:intergenic 50.0%
TGCTCAACGGTGGATCAAAC+CGG - Chr2:18057215-18057234 MsG0280007611.01.T01:CDS 50.0%
TGCTTGAGGTCCTATGCTGA+TGG - Chr2:18054635-18054654 MsG0280007611.01.T01:intron 50.0%
TGGGATTGAGTTAGGCCCAA+GGG + Chr2:18055659-18055678 None:intergenic 50.0%
TGTCTTACCGGCATGTCATG+TGG + Chr2:18055113-18055132 None:intergenic 50.0%
TTGAGGAGGAGGAGATGGTA+GGG + Chr2:18058037-18058056 None:intergenic 50.0%
TTTGGTTGGACTTGGCCCTT+GGG - Chr2:18055641-18055660 MsG0280007611.01.T01:intron 50.0%
! ACTGAGGAGAAAGTGGTGGA+AGG - Chr2:18053234-18053253 MsG0280007611.01.T01:three_prime_UTR 50.0%
! CACGCTCTAGATGTCGATCA+TGG + Chr2:18055553-18055572 None:intergenic 50.0%
! CATCTAGAGCGTGACTTGAG+TGG - Chr2:18055560-18055579 MsG0280007611.01.T01:intron 50.0%
! CCCTACGAAACCGGCTTATA+AGG - Chr2:18055449-18055468 MsG0280007611.01.T01:intron 50.0%
! CCTATAAGGTGTCCTCAACC+AGG - Chr2:18054680-18054699 MsG0280007611.01.T01:intron 50.0%
! CGGATTAGACATCTGAAGCG+TGG + Chr2:18056702-18056721 None:intergenic 50.0%
! CTGAGGAGAAAGTGGTGGAA+GGG - Chr2:18053235-18053254 MsG0280007611.01.T01:three_prime_UTR 50.0%
! GAAAGTGGTGGAAGGGTTGA+AGG - Chr2:18053242-18053261 MsG0280007611.01.T01:three_prime_UTR 50.0%
! GAAGCATCTCTCTCCTCTTC+CGG + Chr2:18055000-18055019 None:intergenic 50.0%
! GGTGATGCCACAGCGAATTT+TGG - Chr2:18055593-18055612 MsG0280007611.01.T01:intron 50.0%
!! TATTGGTGTCATCGGTGCCA+TGG - Chr2:18057710-18057729 MsG0280007611.01.T01:intron 50.0%
!! TTTTGGTTGGACTTGGCCCT+TGG - Chr2:18055640-18055659 MsG0280007611.01.T01:intron 50.0%
!!! CTCGTCACTTTTCCGGTAAC+TGG - Chr2:18054518-18054537 MsG0280007611.01.T01:intron 50.0%
CGGTTTCGTAGGGTTGCGTT+AGG + Chr2:18055442-18055461 None:intergenic 55.0%
GACGAGTCCCATAGCTACTG+TGG + Chr2:18054504-18054523 None:intergenic 55.0%
GCAGTTGGCCACAGTAGCTA+TGG - Chr2:18054493-18054512 MsG0280007611.01.T01:intron 55.0%
GCTACTGTGGCCAACTGCAT+TGG + Chr2:18054491-18054510 None:intergenic 55.0%
GGAGGAGATGGTAGGGATTG+TGG + Chr2:18058030-18058049 None:intergenic 55.0%
GGTCAGATTTAGGGGAGAGG+TGG + Chr2:18055267-18055286 None:intergenic 55.0%
GTGGGATTGAGTTAGGCCCA+AGG + Chr2:18055660-18055679 None:intergenic 55.0%
TCATGGACATGAGAGGGGTG+TGG + Chr2:18055536-18055555 None:intergenic 55.0%
! GGCACTGAGAGAGAGGATTC+TGG - Chr2:18054403-18054422 MsG0280007611.01.T01:intron 55.0%
! TGTGGTGCTGAGTACAGGGA+CGG - Chr2:18057832-18057851 MsG0280007611.01.T01:intron 55.0%
!! GAGGTTTTCTGCGTGGGCTG+TGG - Chr2:18054928-18054947 MsG0280007611.01.T01:intron 60.0%
! GCGTGGGCTGTGGTGTTCCT+TGG - Chr2:18054938-18054957 MsG0280007611.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 18053087 18058633 18053087 ID=MsG0280007611.01;Name=MsG0280007611.01
Chr2 mRNA 18053087 18058633 18053087 ID=MsG0280007611.01.T01;Parent=MsG0280007611.01;Name=MsG0280007611.01.T01;_AED=0.36;_eAED=0.36;_QI=0|0.5|0.2|1|0.75|0.8|5|736|303
Chr2 exon 18053087 18053913 18053087 ID=MsG0280007611.01.T01:exon:10910;Parent=MsG0280007611.01.T01
Chr2 exon 18056596 18056791 18056596 ID=MsG0280007611.01.T01:exon:10909;Parent=MsG0280007611.01.T01
Chr2 exon 18057064 18057355 18057064 ID=MsG0280007611.01.T01:exon:10908;Parent=MsG0280007611.01.T01
Chr2 exon 18058191 18058325 18058191 ID=MsG0280007611.01.T01:exon:10907;Parent=MsG0280007611.01.T01
Chr2 exon 18058436 18058633 18058436 ID=MsG0280007611.01.T01:exon:10906;Parent=MsG0280007611.01.T01
Chr2 CDS 18058436 18058633 18058436 ID=MsG0280007611.01.T01:cds;Parent=MsG0280007611.01.T01
Chr2 CDS 18058191 18058325 18058191 ID=MsG0280007611.01.T01:cds;Parent=MsG0280007611.01.T01
Chr2 CDS 18057064 18057355 18057064 ID=MsG0280007611.01.T01:cds;Parent=MsG0280007611.01.T01
Chr2 CDS 18056596 18056791 18056596 ID=MsG0280007611.01.T01:cds;Parent=MsG0280007611.01.T01
Chr2 CDS 18053823 18053913 18053823 ID=MsG0280007611.01.T01:cds;Parent=MsG0280007611.01.T01
Chr2 three_prime_UTR 18053087 18053822 18053087 ID=MsG0280007611.01.T01:three_prime_utr;Parent=MsG0280007611.01.T01
Gene Sequence

>MsG0280007611.01.T01

ATGGAGGTTCAAGCTCTTTTAGATTATGAACCATTTGTTAATGCTGAGGAGGAGGAAGAAGAAGATGAGTTTTGCAGTTGCTGTGAAGAAGATGCAGAAGAAAGAGATGAAGAAGAAAGAGAAGAAGAACAAGAAGAGTGGAAAGAAACTGAGGAGAAAGTGGTGGAAGGGTTGAAGGAAGAACTTGATGAATTTTCAGGTGCAGAAAAGCTTGATTTTTATGCTGAGGAGCCTATGGTTGATTACTTGGCACTCATGGATGGGTTGTTAGAAGCGTTGCAGAACAAGATCCGTAAGGTTTATGCTTTCACTGATTCTGAGTTGTTATATAAGATAACAGCTGAGAAAAATTTGGACATGCCGCTTTTGATGGCACTGAGAGAGAGGATTCTGGAACATGCCAATAATTTTGAAACTTTTGATCTGAAGCTTATACCAAGCATTGATCTTGAGCAGCCAATGCAGTTGGCCACAGTAGCTATGGGACTCGTCACTTTTCCGGTAACTGGTGAAAAATTGCTCGAGAACTGTTCTATTTGTTGCGACGACAAGCCAGTGCCAATGATGATTACCTTGAAATGTTCACACACATTCTGTTCACATTGCTTGAGGTCCTATGCTGATGAGGTTTTCTGCGTGGGCTGTGGTGTTCCTTGGCATTCTTCCATGAGCTGTGAAGAATTTCAGAGTTTGCCGGAAGAGGAGAGAGATGCTTCTGACATTACCTTGCATCGTCTTGCTCAGAATAAAAGGTGGAAGCGCTGTCAGCAGTGTCGTATAATGATTGAGCTTACTCAAGGTTGTTACCACATGACATGCCGGTGCGGTCACGAGTTCTGCTATTCTTGTGGTGCTGAGTACAGGGACGGCCAACAAACATGTCAATGTGCATTTTGGATGAAGACAGCGTGA
Protein sequence

>MsG0280007611.01.T01

MEVQALLDYEPFVNAEEEEEEDEFCSCCEEDAEERDEEEREEEQEEWKETEEKVVEGLKEELDEFSGAEKLDFYAEEPMVDYLALMDGLLEALQNKIRKVYAFTDSELLYKITAEKNLDMPLLMALRERILEHANNFETFDLKLIPSIDLEQPMQLATVAMGLVTFPVTGEKLLENCSICCDDKPVPMMITLKCSHTFCSHCLRSYADEVFCVGCGVPWHSSMSCEEFQSLPEEERDASDITLHRLAQNKRWKRCQQCRIMIELTQGCYHMTCRCGHEFCYSCGAEYRDGQQTCQCAFWMKTA*