Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007729.01.T01 | XP_013469941.1 | 91.613 | 155 | 13 | 0 | 1 | 155 | 18 | 172 | 2.37E-98 | 299 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007729.01.T01 | Q9FKK2 | 57.419 | 155 | 63 | 2 | 1 | 152 | 16 | 170 | 6.21E-52 | 176 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007729.01.T01 | A0A072VPP2 | 91.613 | 155 | 13 | 0 | 1 | 155 | 18 | 172 | 1.13e-98 | 299 |
Gene ID | Type | Classification |
---|---|---|
MsG0280007729.01.T01 | TF | MADS-M-type |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0280007729.01 | MsG0380013711.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007729.01.T01 | MTR_1g105910 | 91.613 | 155 | 13 | 0 | 1 | 155 | 18 | 172 | 2.87e-102 | 299 |
MsG0280007729.01.T01 | MTR_1g105920 | 91.613 | 155 | 13 | 0 | 1 | 155 | 18 | 172 | 5.18e-102 | 299 |
MsG0280007729.01.T01 | MTR_8g043650 | 90.968 | 155 | 14 | 0 | 1 | 155 | 18 | 172 | 6.59e-101 | 296 |
MsG0280007729.01.T01 | MTR_1g106070 | 89.677 | 155 | 16 | 0 | 1 | 155 | 18 | 172 | 3.93e-99 | 289 |
MsG0280007729.01.T01 | MTR_2g030740 | 90.323 | 155 | 15 | 0 | 1 | 155 | 18 | 172 | 5.60e-99 | 291 |
MsG0280007729.01.T01 | MTR_3g052920 | 87.742 | 155 | 19 | 0 | 1 | 155 | 18 | 172 | 1.15e-98 | 290 |
MsG0280007729.01.T01 | MTR_1g012570 | 89.677 | 155 | 16 | 0 | 1 | 155 | 18 | 172 | 1.67e-98 | 290 |
MsG0280007729.01.T01 | MTR_1g105905 | 85.161 | 155 | 23 | 0 | 1 | 155 | 1 | 155 | 1.67e-93 | 276 |
MsG0280007729.01.T01 | MTR_1g108510 | 70.166 | 181 | 50 | 1 | 1 | 181 | 18 | 194 | 2.35e-86 | 258 |
MsG0280007729.01.T01 | MTR_3g030770 | 81.879 | 149 | 27 | 0 | 1 | 149 | 18 | 166 | 7.38e-86 | 257 |
MsG0280007729.01.T01 | MTR_2g093190 | 77.707 | 157 | 32 | 1 | 1 | 157 | 18 | 171 | 2.49e-82 | 248 |
MsG0280007729.01.T01 | MTR_1g108580 | 78.523 | 149 | 32 | 0 | 1 | 149 | 18 | 166 | 1.42e-81 | 246 |
MsG0280007729.01.T01 | MTR_3g052870 | 78.710 | 155 | 14 | 1 | 1 | 155 | 18 | 153 | 7.55e-80 | 241 |
MsG0280007729.01.T01 | MTR_5g045560 | 72.903 | 155 | 42 | 0 | 1 | 155 | 18 | 172 | 1.60e-77 | 236 |
MsG0280007729.01.T01 | MTR_0121s0080 | 74.839 | 155 | 39 | 0 | 1 | 155 | 18 | 172 | 2.14e-77 | 236 |
MsG0280007729.01.T01 | MTR_1g077360 | 69.677 | 155 | 47 | 0 | 1 | 155 | 18 | 172 | 6.59e-75 | 230 |
MsG0280007729.01.T01 | MTR_1g075600 | 69.677 | 155 | 47 | 0 | 1 | 155 | 18 | 172 | 2.40e-73 | 226 |
MsG0280007729.01.T01 | MTR_2g085280 | 66.452 | 155 | 52 | 0 | 1 | 155 | 18 | 172 | 3.82e-71 | 220 |
MsG0280007729.01.T01 | MTR_2g085250 | 66.452 | 155 | 52 | 0 | 1 | 155 | 18 | 172 | 4.65e-71 | 220 |
MsG0280007729.01.T01 | MTR_5g055100 | 66.452 | 155 | 52 | 0 | 1 | 155 | 18 | 172 | 2.03e-70 | 218 |
MsG0280007729.01.T01 | MTR_5g053390 | 67.097 | 155 | 51 | 0 | 1 | 155 | 18 | 172 | 5.75e-69 | 214 |
MsG0280007729.01.T01 | MTR_7g062350 | 56.716 | 201 | 79 | 2 | 7 | 207 | 36 | 228 | 2.08e-67 | 211 |
MsG0280007729.01.T01 | MTR_3g080940 | 57.237 | 152 | 65 | 0 | 4 | 155 | 21 | 172 | 5.98e-60 | 191 |
MsG0280007729.01.T01 | MTR_0121s0100 | 77.477 | 111 | 25 | 0 | 1 | 111 | 18 | 128 | 8.72e-57 | 180 |
MsG0280007729.01.T01 | MTR_1g075570 | 63.871 | 155 | 42 | 1 | 1 | 155 | 1 | 141 | 1.30e-55 | 178 |
MsG0280007729.01.T01 | MTR_3g030780 | 72.321 | 112 | 31 | 0 | 1 | 112 | 18 | 129 | 1.42e-51 | 166 |
MsG0280007729.01.T01 | MTR_3g067910 | 67.961 | 103 | 33 | 0 | 4 | 106 | 2 | 104 | 1.88e-45 | 150 |
MsG0280007729.01.T01 | MTR_8g086290 | 38.415 | 164 | 87 | 3 | 1 | 157 | 21 | 177 | 4.66e-33 | 120 |
MsG0280007729.01.T01 | MTR_7g028448 | 44.203 | 138 | 65 | 3 | 5 | 142 | 25 | 150 | 1.16e-32 | 119 |
MsG0280007729.01.T01 | MTR_4g036915 | 44.203 | 138 | 65 | 3 | 5 | 142 | 25 | 150 | 1.16e-32 | 119 |
MsG0280007729.01.T01 | MTR_2g105290 | 38.065 | 155 | 86 | 2 | 4 | 155 | 24 | 171 | 4.38e-32 | 117 |
MsG0280007729.01.T01 | MTR_1g108500 | 64.948 | 97 | 13 | 1 | 5 | 101 | 110 | 185 | 1.35e-30 | 118 |
MsG0280007729.01.T01 | MTR_4g127140 | 35.976 | 164 | 85 | 4 | 5 | 155 | 25 | 181 | 4.61e-28 | 107 |
MsG0280007729.01.T01 | MTR_3g067875 | 83.929 | 56 | 9 | 0 | 1 | 56 | 1 | 56 | 2.34e-26 | 99.4 |
MsG0280007729.01.T01 | MTR_3g067915 | 65.672 | 67 | 23 | 0 | 43 | 109 | 30 | 96 | 4.45e-24 | 94.4 |
MsG0280007729.01.T01 | MTR_3g067870 | 70.492 | 61 | 18 | 0 | 1 | 61 | 85 | 145 | 3.65e-22 | 91.3 |
MsG0280007729.01.T01 | MTR_8g051580 | 50.588 | 85 | 40 | 1 | 8 | 92 | 18 | 100 | 1.99e-21 | 89.7 |
MsG0280007729.01.T01 | MTR_1g047550 | 71.698 | 53 | 15 | 0 | 8 | 60 | 18 | 70 | 2.58e-21 | 89.4 |
MsG0280007729.01.T01 | MTR_8g079502 | 71.698 | 53 | 15 | 0 | 8 | 60 | 18 | 70 | 1.07e-20 | 87.8 |
MsG0280007729.01.T01 | MTR_1g054265 | 45.192 | 104 | 55 | 1 | 8 | 111 | 18 | 119 | 1.47e-20 | 87.0 |
MsG0280007729.01.T01 | MTR_8g046350 | 44.898 | 98 | 47 | 2 | 8 | 105 | 18 | 108 | 1.61e-20 | 87.0 |
MsG0280007729.01.T01 | MTR_1g063160 | 50.000 | 96 | 43 | 3 | 8 | 101 | 18 | 110 | 1.90e-20 | 87.0 |
MsG0280007729.01.T01 | MTR_4g131030 | 39.655 | 116 | 53 | 4 | 8 | 108 | 18 | 131 | 1.98e-20 | 87.8 |
MsG0280007729.01.T01 | MTR_4g094632 | 39.423 | 104 | 60 | 2 | 1 | 103 | 11 | 112 | 4.33e-17 | 77.4 |
MsG0280007729.01.T01 | MTR_8g022970 | 35.252 | 139 | 77 | 3 | 10 | 142 | 36 | 167 | 6.29e-16 | 75.1 |
MsG0280007729.01.T01 | MTR_3g437790 | 34.965 | 143 | 76 | 4 | 9 | 142 | 30 | 164 | 3.03e-15 | 73.2 |
MsG0280007729.01.T01 | MTR_4g102530 | 50.769 | 65 | 32 | 0 | 1 | 65 | 11 | 75 | 3.12e-15 | 73.6 |
MsG0280007729.01.T01 | MTR_3g109930 | 32.143 | 140 | 79 | 3 | 10 | 142 | 20 | 150 | 1.34e-14 | 70.9 |
MsG0280007729.01.T01 | MTR_4g094638 | 39.175 | 97 | 58 | 1 | 1 | 96 | 11 | 107 | 1.36e-14 | 71.2 |
MsG0280007729.01.T01 | MTR_4g093970 | 32.164 | 171 | 92 | 4 | 1 | 150 | 37 | 204 | 2.50e-14 | 71.6 |
MsG0280007729.01.T01 | MTR_8g033220 | 33.728 | 169 | 79 | 5 | 1 | 149 | 11 | 166 | 3.53e-14 | 70.9 |
MsG0280007729.01.T01 | MTR_8g033220 | 33.728 | 169 | 79 | 5 | 1 | 149 | 11 | 166 | 4.06e-14 | 70.9 |
MsG0280007729.01.T01 | MTR_3g005530 | 50.847 | 59 | 29 | 0 | 1 | 59 | 11 | 69 | 6.38e-14 | 70.1 |
MsG0280007729.01.T01 | MTR_6g464720 | 53.333 | 60 | 27 | 1 | 1 | 59 | 11 | 70 | 1.38e-13 | 69.7 |
MsG0280007729.01.T01 | MTR_1g053070 | 45.833 | 72 | 39 | 0 | 1 | 72 | 11 | 82 | 2.09e-13 | 69.3 |
MsG0280007729.01.T01 | MTR_1g101970 | 50.847 | 59 | 29 | 0 | 1 | 59 | 11 | 69 | 2.56e-13 | 67.8 |
MsG0280007729.01.T01 | MTR_7g075870 | 37.255 | 102 | 62 | 1 | 1 | 102 | 11 | 110 | 2.79e-13 | 68.2 |
MsG0280007729.01.T01 | MTR_8g033270 | 52.542 | 59 | 28 | 0 | 1 | 59 | 11 | 69 | 5.84e-13 | 67.8 |
MsG0280007729.01.T01 | MTR_5g066180 | 26.389 | 216 | 125 | 5 | 1 | 204 | 11 | 204 | 6.92e-13 | 67.4 |
MsG0280007729.01.T01 | MTR_3g102570 | 41.053 | 95 | 53 | 3 | 1 | 94 | 11 | 103 | 1.03e-12 | 67.8 |
MsG0280007729.01.T01 | MTR_4g109830 | 50.000 | 60 | 29 | 1 | 1 | 59 | 11 | 70 | 1.63e-12 | 66.2 |
MsG0280007729.01.T01 | MTR_2g009890 | 49.153 | 59 | 30 | 0 | 1 | 59 | 11 | 69 | 1.67e-12 | 67.0 |
MsG0280007729.01.T01 | MTR_3g452380 | 40.659 | 91 | 44 | 1 | 1 | 91 | 26 | 106 | 2.11e-12 | 66.2 |
MsG0280007729.01.T01 | MTR_7g075870 | 36.893 | 103 | 62 | 2 | 1 | 102 | 11 | 111 | 3.01e-12 | 65.1 |
MsG0280007729.01.T01 | MTR_5g032150 | 27.692 | 195 | 122 | 6 | 1 | 181 | 11 | 200 | 4.87e-12 | 64.7 |
MsG0280007729.01.T01 | MTR_5g031000 | 49.153 | 59 | 30 | 0 | 1 | 59 | 11 | 69 | 6.17e-12 | 64.7 |
MsG0280007729.01.T01 | MTR_5g031000 | 49.153 | 59 | 30 | 0 | 1 | 59 | 11 | 69 | 6.31e-12 | 64.7 |
MsG0280007729.01.T01 | MTR_8g087860 | 49.153 | 59 | 30 | 0 | 1 | 59 | 27 | 85 | 7.64e-12 | 64.7 |
MsG0280007729.01.T01 | MTR_5g032520 | 47.458 | 59 | 31 | 0 | 1 | 59 | 11 | 69 | 1.02e-11 | 63.9 |
MsG0280007729.01.T01 | MTR_2g017865 | 27.841 | 176 | 98 | 5 | 1 | 150 | 26 | 198 | 1.26e-11 | 64.3 |
MsG0280007729.01.T01 | MTR_0003s0590 | 49.153 | 59 | 30 | 0 | 1 | 59 | 11 | 69 | 2.14e-11 | 63.5 |
MsG0280007729.01.T01 | MTR_8g066260 | 48.333 | 60 | 30 | 1 | 1 | 59 | 11 | 70 | 2.66e-11 | 62.8 |
MsG0280007729.01.T01 | MTR_6g015975 | 50.000 | 60 | 29 | 1 | 1 | 59 | 11 | 70 | 2.94e-11 | 62.8 |
MsG0280007729.01.T01 | MTR_5g021270 | 47.541 | 61 | 30 | 1 | 1 | 59 | 11 | 71 | 3.12e-11 | 62.8 |
MsG0280007729.01.T01 | MTR_5g021270 | 47.541 | 61 | 30 | 1 | 1 | 59 | 11 | 71 | 3.16e-11 | 62.8 |
MsG0280007729.01.T01 | MTR_4g084740 | 46.269 | 67 | 34 | 2 | 1 | 66 | 11 | 76 | 4.27e-11 | 63.2 |
MsG0280007729.01.T01 | MTR_4g051538 | 32.530 | 166 | 88 | 6 | 6 | 168 | 23 | 167 | 5.03e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007729.01.T01 | AT5G60440 | 57.419 | 155 | 63 | 2 | 1 | 152 | 16 | 170 | 6.33e-53 | 176 |
MsG0280007729.01.T01 | AT2G24840 | 48.684 | 152 | 67 | 4 | 1 | 146 | 72 | 218 | 9.96e-39 | 137 |
MsG0280007729.01.T01 | AT1G01530 | 44.586 | 157 | 78 | 3 | 1 | 150 | 16 | 170 | 3.20e-33 | 122 |
MsG0280007729.01.T01 | AT1G65360 | 41.667 | 156 | 88 | 2 | 1 | 155 | 16 | 169 | 1.46e-31 | 118 |
MsG0280007729.01.T01 | AT4G36590 | 43.624 | 149 | 78 | 2 | 1 | 143 | 16 | 164 | 6.51e-30 | 114 |
MsG0280007729.01.T01 | AT2G34440 | 37.333 | 150 | 82 | 4 | 8 | 152 | 18 | 160 | 7.60e-24 | 95.9 |
MsG0280007729.01.T01 | AT3G66656 | 43.478 | 115 | 60 | 2 | 8 | 117 | 18 | 132 | 5.07e-22 | 91.3 |
MsG0280007729.01.T01 | AT1G72350 | 32.143 | 140 | 62 | 3 | 4 | 143 | 55 | 161 | 4.72e-17 | 79.0 |
MsG0280007729.01.T01 | AT3G04100 | 27.632 | 152 | 94 | 3 | 1 | 142 | 23 | 168 | 2.37e-16 | 76.6 |
MsG0280007729.01.T01 | AT2G45660 | 53.333 | 60 | 28 | 0 | 1 | 60 | 11 | 70 | 7.63e-16 | 73.9 |
MsG0280007729.01.T01 | AT4G22950 | 39.216 | 102 | 59 | 1 | 1 | 102 | 11 | 109 | 9.66e-16 | 74.3 |
MsG0280007729.01.T01 | AT2G45660 | 53.333 | 60 | 28 | 0 | 1 | 60 | 11 | 70 | 3.37e-15 | 73.6 |
MsG0280007729.01.T01 | AT4G22950 | 39.216 | 102 | 59 | 1 | 1 | 102 | 11 | 109 | 4.75e-15 | 73.2 |
MsG0280007729.01.T01 | AT4G22950 | 39.216 | 102 | 59 | 1 | 1 | 102 | 11 | 109 | 4.75e-15 | 73.2 |
MsG0280007729.01.T01 | AT1G28460 | 31.655 | 139 | 89 | 3 | 9 | 144 | 25 | 160 | 2.20e-14 | 70.5 |
MsG0280007729.01.T01 | AT1G17310 | 33.766 | 154 | 61 | 5 | 8 | 156 | 64 | 181 | 2.46e-14 | 71.2 |
MsG0280007729.01.T01 | AT1G17310 | 33.766 | 154 | 61 | 5 | 8 | 156 | 75 | 192 | 2.76e-14 | 71.2 |
MsG0280007729.01.T01 | AT4G24540 | 29.469 | 207 | 112 | 6 | 8 | 197 | 18 | 207 | 5.19e-14 | 70.5 |
MsG0280007729.01.T01 | AT2G45650 | 52.542 | 59 | 28 | 0 | 1 | 59 | 11 | 69 | 1.12e-13 | 70.1 |
MsG0280007729.01.T01 | AT4G09960 | 44.156 | 77 | 42 | 1 | 1 | 76 | 11 | 87 | 1.17e-13 | 69.3 |
MsG0280007729.01.T01 | AT4G09960 | 44.156 | 77 | 42 | 1 | 1 | 76 | 12 | 88 | 1.18e-13 | 69.7 |
MsG0280007729.01.T01 | AT4G09960 | 44.156 | 77 | 42 | 1 | 1 | 76 | 11 | 87 | 1.24e-13 | 69.7 |
MsG0280007729.01.T01 | AT2G22540 | 31.081 | 222 | 121 | 9 | 1 | 196 | 11 | 226 | 1.73e-13 | 69.3 |
MsG0280007729.01.T01 | AT2G22540 | 31.081 | 222 | 121 | 9 | 1 | 196 | 11 | 226 | 1.73e-13 | 69.3 |
MsG0280007729.01.T01 | AT4G09960 | 44.156 | 77 | 42 | 1 | 1 | 76 | 21 | 97 | 1.98e-13 | 68.9 |
MsG0280007729.01.T01 | AT4G09960 | 44.156 | 77 | 42 | 1 | 1 | 76 | 37 | 113 | 2.20e-13 | 69.3 |
MsG0280007729.01.T01 | AT1G29962 | 29.801 | 151 | 99 | 4 | 9 | 152 | 25 | 175 | 2.35e-13 | 67.8 |
MsG0280007729.01.T01 | AT4G09960 | 44.156 | 77 | 42 | 1 | 1 | 76 | 106 | 182 | 2.96e-13 | 69.7 |
MsG0280007729.01.T01 | AT4G37940 | 49.153 | 59 | 30 | 0 | 1 | 59 | 11 | 69 | 3.51e-13 | 68.2 |
MsG0280007729.01.T01 | AT4G37940 | 49.153 | 59 | 30 | 0 | 1 | 59 | 11 | 69 | 3.89e-13 | 67.8 |
MsG0280007729.01.T01 | AT4G37940 | 49.153 | 59 | 30 | 0 | 1 | 59 | 11 | 69 | 4.88e-13 | 66.6 |
MsG0280007729.01.T01 | AT3G57230 | 45.763 | 59 | 32 | 0 | 1 | 59 | 11 | 69 | 5.28e-13 | 65.9 |
MsG0280007729.01.T01 | AT5G51870 | 50.847 | 59 | 29 | 0 | 1 | 59 | 11 | 69 | 8.09e-13 | 65.9 |
MsG0280007729.01.T01 | AT5G51870 | 50.847 | 59 | 29 | 0 | 1 | 59 | 11 | 69 | 8.90e-13 | 66.6 |
MsG0280007729.01.T01 | AT5G51870 | 50.847 | 59 | 29 | 0 | 1 | 59 | 11 | 69 | 1.29e-12 | 66.6 |
MsG0280007729.01.T01 | AT3G61120 | 50.847 | 59 | 29 | 0 | 1 | 59 | 11 | 69 | 1.31e-12 | 67.0 |
MsG0280007729.01.T01 | AT5G51870 | 50.847 | 59 | 29 | 0 | 1 | 59 | 34 | 92 | 1.66e-12 | 65.5 |
MsG0280007729.01.T01 | AT5G51870 | 50.847 | 59 | 29 | 0 | 1 | 59 | 21 | 79 | 1.75e-12 | 66.2 |
MsG0280007729.01.T01 | AT4G11880 | 46.875 | 64 | 33 | 1 | 1 | 63 | 11 | 74 | 2.31e-12 | 65.1 |
MsG0280007729.01.T01 | AT4G11880 | 46.875 | 64 | 33 | 1 | 1 | 63 | 11 | 74 | 2.31e-12 | 65.1 |
MsG0280007729.01.T01 | AT3G57230 | 45.763 | 59 | 32 | 0 | 1 | 59 | 11 | 69 | 2.52e-12 | 65.9 |
MsG0280007729.01.T01 | AT3G57230 | 45.763 | 59 | 32 | 0 | 1 | 59 | 11 | 69 | 2.52e-12 | 65.9 |
MsG0280007729.01.T01 | AT3G30260 | 29.747 | 158 | 93 | 4 | 1 | 157 | 11 | 151 | 2.61e-12 | 66.2 |
MsG0280007729.01.T01 | AT4G18960 | 38.462 | 91 | 46 | 1 | 1 | 91 | 27 | 107 | 3.37e-12 | 65.9 |
MsG0280007729.01.T01 | AT5G60910 | 31.771 | 192 | 115 | 7 | 1 | 182 | 11 | 196 | 3.99e-12 | 65.5 |
MsG0280007729.01.T01 | AT4G11880 | 46.875 | 64 | 33 | 1 | 1 | 63 | 11 | 74 | 4.29e-12 | 65.1 |
MsG0280007729.01.T01 | AT4G11880 | 46.875 | 64 | 33 | 1 | 1 | 63 | 11 | 74 | 4.29e-12 | 65.1 |
MsG0280007729.01.T01 | AT2G42830 | 49.153 | 59 | 30 | 0 | 1 | 59 | 26 | 84 | 5.22e-12 | 65.1 |
MsG0280007729.01.T01 | AT3G54340 | 47.541 | 61 | 30 | 1 | 1 | 59 | 11 | 71 | 5.28e-12 | 65.1 |
MsG0280007729.01.T01 | AT2G42830 | 49.153 | 59 | 30 | 0 | 1 | 59 | 26 | 84 | 5.66e-12 | 65.1 |
MsG0280007729.01.T01 | AT5G51860 | 49.153 | 59 | 30 | 0 | 1 | 59 | 11 | 69 | 6.51e-12 | 63.9 |
MsG0280007729.01.T01 | AT1G22130 | 35.417 | 96 | 61 | 1 | 1 | 95 | 11 | 106 | 7.48e-12 | 65.5 |
MsG0280007729.01.T01 | AT5G51860 | 49.153 | 59 | 30 | 0 | 1 | 59 | 11 | 69 | 8.07e-12 | 63.9 |
MsG0280007729.01.T01 | AT3G58780 | 49.153 | 59 | 30 | 0 | 1 | 59 | 26 | 84 | 8.63e-12 | 64.7 |
MsG0280007729.01.T01 | AT2G22630 | 51.923 | 52 | 25 | 0 | 8 | 59 | 18 | 69 | 8.99e-12 | 64.3 |
MsG0280007729.01.T01 | AT2G22630 | 51.923 | 52 | 25 | 0 | 8 | 59 | 18 | 69 | 8.99e-12 | 64.3 |
MsG0280007729.01.T01 | AT5G62165 | 29.452 | 146 | 97 | 4 | 1 | 142 | 11 | 154 | 9.01e-12 | 62.8 |
MsG0280007729.01.T01 | AT5G62165 | 29.452 | 146 | 97 | 4 | 1 | 142 | 11 | 154 | 9.01e-12 | 62.8 |
MsG0280007729.01.T01 | AT5G62165 | 29.452 | 146 | 97 | 4 | 1 | 142 | 11 | 154 | 9.01e-12 | 62.8 |
MsG0280007729.01.T01 | AT1G69120 | 41.463 | 82 | 45 | 1 | 1 | 82 | 11 | 89 | 9.02e-12 | 64.3 |
MsG0280007729.01.T01 | AT5G13790 | 40.476 | 84 | 41 | 1 | 1 | 84 | 11 | 85 | 9.40e-12 | 64.7 |
MsG0280007729.01.T01 | AT3G58780 | 49.153 | 59 | 30 | 0 | 1 | 59 | 32 | 90 | 1.00e-11 | 64.3 |
MsG0280007729.01.T01 | AT1G77980 | 36.458 | 96 | 60 | 1 | 1 | 95 | 11 | 106 | 1.12e-11 | 65.1 |
MsG0280007729.01.T01 | AT5G62165 | 44.068 | 59 | 33 | 0 | 1 | 59 | 11 | 69 | 1.26e-11 | 60.8 |
MsG0280007729.01.T01 | AT2G14210 | 46.667 | 60 | 31 | 1 | 1 | 59 | 11 | 70 | 1.38e-11 | 63.9 |
MsG0280007729.01.T01 | AT5G62165 | 44.068 | 59 | 33 | 0 | 1 | 59 | 11 | 69 | 1.53e-11 | 62.0 |
MsG0280007729.01.T01 | AT5G62165 | 44.068 | 59 | 33 | 0 | 1 | 59 | 11 | 69 | 1.53e-11 | 62.0 |
MsG0280007729.01.T01 | AT5G62165 | 44.068 | 59 | 33 | 0 | 1 | 59 | 11 | 69 | 1.53e-11 | 62.0 |
MsG0280007729.01.T01 | AT5G62165 | 44.068 | 59 | 33 | 0 | 1 | 59 | 11 | 69 | 1.53e-11 | 62.0 |
MsG0280007729.01.T01 | AT5G62165 | 44.068 | 59 | 33 | 0 | 1 | 59 | 11 | 69 | 1.53e-11 | 62.0 |
MsG0280007729.01.T01 | AT3G58780 | 49.153 | 59 | 30 | 0 | 1 | 59 | 26 | 84 | 1.65e-11 | 64.3 |
MsG0280007729.01.T01 | AT1G69120 | 41.463 | 82 | 45 | 1 | 1 | 82 | 11 | 89 | 1.69e-11 | 63.9 |
MsG0280007729.01.T01 | AT2G14210 | 46.667 | 60 | 31 | 1 | 1 | 59 | 11 | 70 | 1.74e-11 | 63.5 |
MsG0280007729.01.T01 | AT5G13790 | 49.153 | 59 | 30 | 0 | 1 | 59 | 11 | 69 | 1.74e-11 | 63.9 |
MsG0280007729.01.T01 | AT3G57390 | 47.458 | 59 | 31 | 0 | 1 | 59 | 11 | 69 | 1.92e-11 | 63.2 |
MsG0280007729.01.T01 | AT1G77950 | 47.619 | 63 | 31 | 2 | 5 | 66 | 15 | 76 | 2.23e-11 | 63.5 |
MsG0280007729.01.T01 | AT1G77950 | 47.619 | 63 | 31 | 2 | 5 | 66 | 15 | 76 | 2.23e-11 | 63.5 |
MsG0280007729.01.T01 | AT1G77950 | 47.619 | 63 | 31 | 2 | 5 | 66 | 15 | 76 | 2.23e-11 | 63.5 |
MsG0280007729.01.T01 | AT1G77950 | 47.619 | 63 | 31 | 2 | 5 | 66 | 15 | 76 | 2.23e-11 | 63.5 |
MsG0280007729.01.T01 | AT2G22540 | 30.631 | 222 | 117 | 10 | 1 | 196 | 11 | 221 | 2.43e-11 | 63.2 |
MsG0280007729.01.T01 | AT1G26310 | 48.333 | 60 | 30 | 1 | 1 | 59 | 11 | 70 | 2.54e-11 | 63.2 |
MsG0280007729.01.T01 | AT5G10140 | 50.000 | 60 | 29 | 1 | 1 | 59 | 11 | 70 | 3.13e-11 | 61.6 |
MsG0280007729.01.T01 | AT5G62165 | 44.068 | 59 | 33 | 0 | 1 | 59 | 11 | 69 | 3.50e-11 | 62.0 |
MsG0280007729.01.T01 | AT5G62165 | 44.068 | 59 | 33 | 0 | 1 | 59 | 11 | 69 | 3.50e-11 | 62.0 |
MsG0280007729.01.T01 | AT5G62165 | 44.068 | 59 | 33 | 0 | 1 | 59 | 11 | 69 | 3.50e-11 | 62.0 |
MsG0280007729.01.T01 | AT3G57390 | 47.458 | 59 | 31 | 0 | 1 | 59 | 11 | 69 | 3.71e-11 | 62.8 |
MsG0280007729.01.T01 | AT5G62165 | 44.068 | 59 | 33 | 0 | 1 | 59 | 11 | 69 | 4.14e-11 | 61.6 |
MsG0280007729.01.T01 | AT5G62165 | 44.068 | 59 | 33 | 0 | 1 | 59 | 11 | 69 | 4.14e-11 | 61.6 |
Find 64 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGACATGTGCTTGCAATTT+TGG | 0.181035 | 2:+19735420 | MsG0280007729.01.T01:CDS |
TTCAGTTGATCTTCAGCTTC+TGG | 0.254677 | 2:-19735294 | None:intergenic |
GCTTCTGATGATGCAGCTTC+TGG | 0.272243 | 2:-19735204 | None:intergenic |
ATGCAGGCGAAGCCGTATTC+TGG | 0.306832 | 2:-19735540 | None:intergenic |
TTGTTGCTCATCATGCTAAT+AGG | 0.316248 | 2:+19733590 | MsG0280007729.01.T01:CDS |
CTTCTGGACCTCTTGTCTTC+AGG | 0.319753 | 2:-19735188 | None:intergenic |
ATAAGGAATGGATTTCAAAT+TGG | 0.322190 | 2:+19735577 | MsG0280007729.01.T01:CDS |
ATTTCAAATTGGTTCTTCAT+AGG | 0.333528 | 2:+19735588 | MsG0280007729.01.T01:CDS |
ATTGCATGGTACCATTGTTT+TGG | 0.337688 | 2:-19733354 | None:intergenic |
AGGCGACTGAGACTCAATTT+TGG | 0.339905 | 2:+19733491 | MsG0280007729.01.T01:CDS |
ATCTTCAGCTTCTGGTGAAA+TGG | 0.346704 | 2:-19735286 | None:intergenic |
TGGTGGGCTTGTCCCGTTGA+TGG | 0.374570 | 2:+19733511 | MsG0280007729.01.T01:CDS |
CATAGATGTTCCTTTGGATA+AGG | 0.386892 | 2:+19735560 | MsG0280007729.01.T01:CDS |
TGCTAATAGGCTTGTAATCC+AGG | 0.391884 | 2:+19733603 | MsG0280007729.01.T01:CDS |
TCTTCTCGATGTCCAGTAGT+TGG | 0.408924 | 2:-19733438 | None:intergenic |
CGCCTGCATAGATGTTCCTT+TGG | 0.409752 | 2:+19735554 | MsG0280007729.01.T01:CDS |
GTCCCGTTGATGGGATGAAT+AGG | 0.432754 | 2:+19733521 | MsG0280007729.01.T01:CDS |
TCCCGTTGATGGGATGAATA+GGG | 0.437027 | 2:+19733522 | MsG0280007729.01.T01:CDS |
AACTGAATTTGAGAAATTCA+AGG | 0.440191 | 2:+19735310 | MsG0280007729.01.T01:CDS |
TCTATGACCGTATCAACATT+GGG | 0.442152 | 2:-19733307 | None:intergenic |
CTTCTTGAATAATTCAAGTT+GGG | 0.442228 | 2:-19733545 | None:intergenic |
TGAATTATTCAAGAAGGCTC+TGG | 0.442548 | 2:+19733552 | MsG0280007729.01.T01:CDS |
TCTCAGTCGCCTTGCGCAAG+TGG | 0.462833 | 2:-19733480 | None:intergenic |
CATAGGACAACAACCAAATC+AGG | 0.467136 | 2:+19735605 | MsG0280007729.01.T01:CDS |
TCATAGATCGTTATCTCTCT+CGG | 0.471861 | 2:+19733323 | MsG0280007729.01.T01:CDS |
CAAATCAGGCAAAAGATCAT+TGG | 0.472983 | 2:+19735619 | MsG0280007729.01.T01:CDS |
GCCCTATTCATCCCATCAAC+GGG | 0.481029 | 2:-19733523 | None:intergenic |
GGTGGGCTTGTCCCGTTGAT+GGG | 0.493797 | 2:+19733512 | MsG0280007729.01.T01:CDS |
ATGTTCCTTTGGATAAGGAA+TGG | 0.497106 | 2:+19735565 | MsG0280007729.01.T01:CDS |
AAGAAAACAGCTCCAGAATA+CGG | 0.498579 | 2:+19735528 | MsG0280007729.01.T01:CDS |
ATCTATGACCGTATCAACAT+TGG | 0.506195 | 2:-19733308 | None:intergenic |
CCTTCTTGAATAATTCAAGT+TGG | 0.516494 | 2:-19733546 | None:intergenic |
ACAGAGGGTGCAAAGCTCAC+TGG | 0.525840 | 2:-19733224 | None:intergenic |
GAAATCCATTCCTTATCCAA+AGG | 0.527815 | 2:-19735570 | None:intergenic |
CCAACTTGAATTATTCAAGA+AGG | 0.535705 | 2:+19733546 | MsG0280007729.01.T01:CDS |
GGCCCTATTCATCCCATCAA+CGG | 0.536262 | 2:-19733524 | None:intergenic |
GACTCAGATCAACCAACTAC+TGG | 0.537057 | 2:+19733426 | MsG0280007729.01.T01:CDS |
TGGCCACCCCAATGTTGATA+CGG | 0.545005 | 2:+19733300 | MsG0280007729.01.T01:CDS |
CATAGATCGTTATCTCTCTC+GGG | 0.546382 | 2:+19733324 | MsG0280007729.01.T01:CDS |
CTTTCTCGAAGCGCCGTAGT+GGG | 0.553366 | 2:+19733188 | MsG0280007729.01.T01:CDS |
AGGATTCAAGAGTTGTGTCA+TGG | 0.557412 | 2:+19735330 | MsG0280007729.01.T01:CDS |
ATCCAAAGGAACATCTATGC+AGG | 0.557914 | 2:-19735556 | None:intergenic |
AATGAAAATACCTTCTCTCC+AGG | 0.563686 | 2:-19733277 | None:intergenic |
GCTCACGCACGTTGGCGCTA+CGG | 0.567594 | 2:-19733390 | None:intergenic |
ACTTTCTCGAAGCGCCGTAG+TGG | 0.571963 | 2:+19733187 | MsG0280007729.01.T01:CDS |
AGTGAGCTTTGCACCCTCTG+TGG | 0.587031 | 2:+19733226 | MsG0280007729.01.T01:CDS |
TGGTGAAATGGCTTCTGATG+AGG | 0.591955 | 2:-19735274 | None:intergenic |
CATGGATCGAAATTCATCAA+AGG | 0.592792 | 2:+19735348 | MsG0280007729.01.T01:CDS |
AGATCTGAGCCACTTGCGCA+AGG | 0.599881 | 2:+19733471 | MsG0280007729.01.T01:CDS |
CTTTCTTGAAGAGCCCACTA+CGG | 0.610979 | 2:-19733201 | None:intergenic |
AGCAACATCTGCACCACAGA+GGG | 0.615204 | 2:-19733239 | None:intergenic |
ATAGTGCTCCTGAAGACAAG+AGG | 0.620594 | 2:+19735180 | MsG0280007729.01.T01:intron |
AAAGGACAACAAAAGATCAG+TGG | 0.620789 | 2:+19735366 | MsG0280007729.01.T01:CDS |
CGGGTCCCACCCCAAAACAA+TGG | 0.635478 | 2:+19733343 | MsG0280007729.01.T01:CDS |
TGGTACCATGCAATTCATTG+AGG | 0.638950 | 2:+19733363 | MsG0280007729.01.T01:CDS |
GTGAGCCTCAATGAATTGCA+TGG | 0.640763 | 2:-19733368 | None:intergenic |
GCTAATAGGCTTGTAATCCA+GGG | 0.641442 | 2:+19733604 | MsG0280007729.01.T01:CDS |
ACAAAACAGAGTAGTGGAGA+AGG | 0.649789 | 2:-19735489 | None:intergenic |
TGACCGTATCAACATTGGGG+TGG | 0.665619 | 2:-19733303 | None:intergenic |
AAACAGAGTAGTGGAGAAGG+TGG | 0.667603 | 2:-19735486 | None:intergenic |
GTGGACACAAAACAGAGTAG+TGG | 0.680011 | 2:-19735495 | None:intergenic |
AGTATTGAGCTCACGCACGT+TGG | 0.681720 | 2:-19733398 | None:intergenic |
CTATGACCGTATCAACATTG+GGG | 0.709949 | 2:-19733306 | None:intergenic |
GAGCAACATCTGCACCACAG+AGG | 0.729838 | 2:-19733240 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAGTCAATTAAAATTTAT+TGG | + | Chr2:19734215-19734234 | MsG0280007729.01.T01:intron | 10.0% |
!!! | AAATTTTAATTCATTGTTAA+AGG | + | Chr2:19734417-19734436 | MsG0280007729.01.T01:intron | 10.0% |
!!! | TGTTTTAAAATAATTTTGAT+TGG | + | Chr2:19733891-19733910 | MsG0280007729.01.T01:intron | 10.0% |
!! | AACATAAAAATAAATTGACA+CGG | - | Chr2:19733854-19733873 | None:intergenic | 15.0% |
!! | AGGTATTAAAAATTGTAAAT+TGG | + | Chr2:19734960-19734979 | MsG0280007729.01.T01:intron | 15.0% |
!! | ATCTAGTATAATTAACTAAA+TGG | - | Chr2:19734571-19734590 | None:intergenic | 15.0% |
!! | TAAAAAGTTACAACATTTAT+TGG | + | Chr2:19735020-19735039 | MsG0280007729.01.T01:intron | 15.0% |
!!! | ATGTTGTAACTTTTTAATTA+TGG | - | Chr2:19735016-19735035 | None:intergenic | 15.0% |
!!! | TGGATAATTTACATATTTTT+TGG | + | Chr2:19734235-19734254 | MsG0280007729.01.T01:intron | 15.0% |
!! | ACATAAAAATAAATTGACAC+GGG | - | Chr2:19733853-19733872 | None:intergenic | 20.0% |
!!! | AAAAAGTTTTGATGATAACA+AGG | + | Chr2:19734940-19734959 | MsG0280007729.01.T01:intron | 20.0% |
!!! | GTTATCATCAAAACTTTTTA+AGG | - | Chr2:19734939-19734958 | None:intergenic | 20.0% |
!!! | TTTTTTTTGTGTATGATTGA+AGG | + | Chr2:19734738-19734757 | MsG0280007729.01.T01:intron | 20.0% |
! | AACTGAATTTGAGAAATTCA+AGG | + | Chr2:19735310-19735329 | MsG0280007729.01.T01:CDS | 25.0% |
! | AGGAATAATCTTAGTGTTAT+CGG | + | Chr2:19733955-19733974 | MsG0280007729.01.T01:intron | 25.0% |
! | ATAAGAAGAGTTGTGTTTAT+TGG | + | Chr2:19734799-19734818 | MsG0280007729.01.T01:intron | 25.0% |
! | ATCTTCAATGGAATAAATTG+TGG | - | Chr2:19734265-19734284 | None:intergenic | 25.0% |
! | ATGATCAAGTGTAAAAAAAG+TGG | + | Chr2:19734164-19734183 | MsG0280007729.01.T01:intron | 25.0% |
! | GGAATGAAACAAATTCATAT+TGG | - | Chr2:19734105-19734124 | None:intergenic | 25.0% |
! | TAATATTTGTTCAAGTGTAC+AGG | + | Chr2:19734989-19735008 | MsG0280007729.01.T01:intron | 25.0% |
! | TGATGATTAAAAAATGACGA+GGG | - | Chr2:19734126-19734145 | None:intergenic | 25.0% |
! | TTTATTGTAAGTTCTCATTG+AGG | + | Chr2:19734458-19734477 | MsG0280007729.01.T01:intron | 25.0% |
!! | ATAAGGAATGGATTTCAAAT+TGG | + | Chr2:19735577-19735596 | MsG0280007729.01.T01:CDS | 25.0% |
!! | ATTTCAAATTGGTTCTTCAT+AGG | + | Chr2:19735588-19735607 | MsG0280007729.01.T01:CDS | 25.0% |
!! | CTTCTTGAATAATTCAAGTT+GGG | - | Chr2:19733548-19733567 | None:intergenic | 25.0% |
!! | TGGAAGATGATTTTCTTTTA+TGG | + | Chr2:19734819-19734838 | MsG0280007729.01.T01:intron | 25.0% |
!! | TTGATGATTAAAAAATGACG+AGG | - | Chr2:19734127-19734146 | None:intergenic | 25.0% |
!!! | CTTTTTTCTGATTTTCTATG+AGG | + | Chr2:19734490-19734509 | MsG0280007729.01.T01:intron | 25.0% |
CCAACTTGAATTATTCAAGA+AGG | + | Chr2:19733546-19733565 | MsG0280007729.01.T01:CDS | 30.0% | |
CCTTCTTGAATAATTCAAGT+TGG | - | Chr2:19733549-19733568 | None:intergenic | 30.0% | |
GAACAGTTTCCAACAAAAAA+CGG | - | Chr2:19733649-19733668 | None:intergenic | 30.0% | |
GACATTAAATTAGTACATCG+TGG | - | Chr2:19734338-19734357 | None:intergenic | 30.0% | |
GGAATAATCTTAGTGTTATC+GGG | + | Chr2:19733956-19733975 | MsG0280007729.01.T01:intron | 30.0% | |
TCAGATAGGATTATCTTCAA+TGG | - | Chr2:19734277-19734296 | None:intergenic | 30.0% | |
TGAGCAAATAAAGAGCAAAA+AGG | + | Chr2:19735050-19735069 | MsG0280007729.01.T01:intron | 30.0% | |
! | CTTTGTCTTTGTTATCTACT+TGG | + | Chr2:19733984-19734003 | MsG0280007729.01.T01:intron | 30.0% |
! | TTGTTTGGCTTCAACAATAT+GGG | + | Chr2:19733763-19733782 | MsG0280007729.01.T01:intron | 30.0% |
! | TTTCTAGTGTTTGATGTGTT+GGG | + | Chr2:19734891-19734910 | MsG0280007729.01.T01:intron | 30.0% |
! | TTTGTTTGGCTTCAACAATA+TGG | + | Chr2:19733762-19733781 | MsG0280007729.01.T01:intron | 30.0% |
!! | ATTTCTAGTGTTTGATGTGT+TGG | + | Chr2:19734890-19734909 | MsG0280007729.01.T01:intron | 30.0% |
AAAGGACAACAAAAGATCAG+TGG | + | Chr2:19735366-19735385 | MsG0280007729.01.T01:CDS | 35.0% | |
AACAAATGAGGTTGCAACAT+TGG | - | Chr2:19733748-19733767 | None:intergenic | 35.0% | |
AAGAAAACAGCTCCAGAATA+CGG | + | Chr2:19735528-19735547 | MsG0280007729.01.T01:CDS | 35.0% | |
AATGAAAATACCTTCTCTCC+AGG | - | Chr2:19733280-19733299 | None:intergenic | 35.0% | |
ACAAATGAGGTTGCAACATT+GGG | - | Chr2:19733747-19733766 | None:intergenic | 35.0% | |
AGTTTCCAACAAAAAACGGA+AGG | - | Chr2:19733645-19733664 | None:intergenic | 35.0% | |
ATCTATGACCGTATCAACAT+TGG | - | Chr2:19733311-19733330 | None:intergenic | 35.0% | |
ATGAAACTAGGTTAAGCATG+TGG | - | Chr2:19733920-19733939 | None:intergenic | 35.0% | |
ATGCTTAAATTACCAACGAG+AGG | - | Chr2:19734376-19734395 | None:intergenic | 35.0% | |
ATGTTCCTTTGGATAAGGAA+TGG | + | Chr2:19735565-19735584 | MsG0280007729.01.T01:CDS | 35.0% | |
ATGTTGCAACCTCATTTGTT+TGG | + | Chr2:19733748-19733767 | MsG0280007729.01.T01:intron | 35.0% | |
CAAATCAGGCAAAAGATCAT+TGG | + | Chr2:19735619-19735638 | MsG0280007729.01.T01:CDS | 35.0% | |
CAAGTCACATAGATGAAACT+AGG | - | Chr2:19733932-19733951 | None:intergenic | 35.0% | |
CATAGATGTTCCTTTGGATA+AGG | + | Chr2:19735560-19735579 | MsG0280007729.01.T01:CDS | 35.0% | |
CATGGATCGAAATTCATCAA+AGG | + | Chr2:19735348-19735367 | MsG0280007729.01.T01:CDS | 35.0% | |
CTAGTTTCATCTATGTGACT+TGG | + | Chr2:19733930-19733949 | MsG0280007729.01.T01:intron | 35.0% | |
GAAATCCATTCCTTATCCAA+AGG | - | Chr2:19735573-19735592 | None:intergenic | 35.0% | |
GGGTTATGATAAAACTGTGA+TGG | - | Chr2:19733727-19733746 | None:intergenic | 35.0% | |
GTGTAAAAAAAGTGGATCAG+AGG | + | Chr2:19734172-19734191 | MsG0280007729.01.T01:intron | 35.0% | |
GTGTCTAACATATCTCAGAT+AGG | - | Chr2:19734291-19734310 | None:intergenic | 35.0% | |
GTTTCCAACAAAAAACGGAA+GGG | - | Chr2:19733644-19733663 | None:intergenic | 35.0% | |
TAAATTACCAACGAGAGGTT+TGG | - | Chr2:19734371-19734390 | None:intergenic | 35.0% | |
TCATAGATCGTTATCTCTCT+CGG | + | Chr2:19733323-19733342 | MsG0280007729.01.T01:CDS | 35.0% | |
TCTATGACCGTATCAACATT+GGG | - | Chr2:19733310-19733329 | None:intergenic | 35.0% | |
TGAAACTAGGTTAAGCATGT+GGG | - | Chr2:19733919-19733938 | None:intergenic | 35.0% | |
TGAATTATTCAAGAAGGCTC+TGG | + | Chr2:19733552-19733571 | MsG0280007729.01.T01:CDS | 35.0% | |
TGATTTGAATGAGCACAGTA+TGG | + | Chr2:19734636-19734655 | MsG0280007729.01.T01:intron | 35.0% | |
TTGTTGAAGCCAAACAAATG+AGG | - | Chr2:19733760-19733779 | None:intergenic | 35.0% | |
TTGTTGCTCATCATGCTAAT+AGG | + | Chr2:19733590-19733609 | MsG0280007729.01.T01:CDS | 35.0% | |
! | AAGACATGTGCTTGCAATTT+TGG | + | Chr2:19735420-19735439 | MsG0280007729.01.T01:CDS | 35.0% |
! | AGATCAGTGGAATTTTGCAA+CGG | + | Chr2:19735379-19735398 | MsG0280007729.01.T01:CDS | 35.0% |
! | ATTGCATGGTACCATTGTTT+TGG | - | Chr2:19733357-19733376 | None:intergenic | 35.0% |
! | CAATGATCTTTTGCCTGATT+TGG | - | Chr2:19735621-19735640 | None:intergenic | 35.0% |
! | TTGCATGGTACCATTGTTTT+GGG | - | Chr2:19733356-19733375 | None:intergenic | 35.0% |
! | TTTTGCAACGGTCATTTCAA+AGG | + | Chr2:19735391-19735410 | MsG0280007729.01.T01:CDS | 35.0% |
!! | TTCATCTATGTGACTTGGTT+AGG | + | Chr2:19733935-19733954 | MsG0280007729.01.T01:intron | 35.0% |
!!! | GGAGAGAAGGTATTTTCATT+TGG | + | Chr2:19733280-19733299 | MsG0280007729.01.T01:CDS | 35.0% |
AAAAACGGAAGGGTTTGAGT+AGG | - | Chr2:19733634-19733653 | None:intergenic | 40.0% | |
AAATTGACACGGGCATCTTA+AGG | - | Chr2:19733843-19733862 | None:intergenic | 40.0% | |
AGGATTCAAGAGTTGTGTCA+TGG | + | Chr2:19735330-19735349 | MsG0280007729.01.T01:CDS | 40.0% | |
ATCCAAAGGAACATCTATGC+AGG | - | Chr2:19735559-19735578 | None:intergenic | 40.0% | |
ATCTTCAGCTTCTGGTGAAA+TGG | - | Chr2:19735289-19735308 | None:intergenic | 40.0% | |
CACTTTACTAACTTCAGGAG+CGG | - | Chr2:19735150-19735169 | None:intergenic | 40.0% | |
CATAGATCGTTATCTCTCTC+GGG | + | Chr2:19733324-19733343 | MsG0280007729.01.T01:CDS | 40.0% | |
CATAGGACAACAACCAAATC+AGG | + | Chr2:19735605-19735624 | MsG0280007729.01.T01:CDS | 40.0% | |
CTATGACCGTATCAACATTG+GGG | - | Chr2:19733309-19733328 | None:intergenic | 40.0% | |
GCTAATAGGCTTGTAATCCA+GGG | + | Chr2:19733604-19733623 | MsG0280007729.01.T01:CDS | 40.0% | |
TAAGTTCTCATTGAGGCTGT+TGG | + | Chr2:19734465-19734484 | MsG0280007729.01.T01:intron | 40.0% | |
TGACACGTCTCTTCAAAGAA+CGG | + | Chr2:19734687-19734706 | MsG0280007729.01.T01:intron | 40.0% | |
TGCTAATAGGCTTGTAATCC+AGG | + | Chr2:19733603-19733622 | MsG0280007729.01.T01:CDS | 40.0% | |
TGGTACCATGCAATTCATTG+AGG | + | Chr2:19733363-19733382 | MsG0280007729.01.T01:CDS | 40.0% | |
TTCAGTTGATCTTCAGCTTC+TGG | - | Chr2:19735297-19735316 | None:intergenic | 40.0% | |
! | ACAAAACAGAGTAGTGGAGA+AGG | - | Chr2:19735492-19735511 | None:intergenic | 40.0% |
! | TGTTTTCTTGTCTTGTAGCG+TGG | - | Chr2:19735517-19735536 | None:intergenic | 40.0% |
! | TTTGGCTTCAACAATATGGG+CGG | + | Chr2:19733766-19733785 | MsG0280007729.01.T01:intron | 40.0% |
!! | AGGAGCACTTTACTAACTTC+AGG | - | Chr2:19735155-19735174 | None:intergenic | 40.0% |
!! | GACTGAGACTCAATTTTGGT+GGG | + | Chr2:19733495-19733514 | MsG0280007729.01.T01:CDS | 40.0% |
!! | TGCATGGTACCATTGTTTTG+GGG | - | Chr2:19733355-19733374 | None:intergenic | 40.0% |
!!! | CAAACCCTTCCGTTTTTTGT+TGG | + | Chr2:19733637-19733656 | MsG0280007729.01.T01:intron | 40.0% |
AGGCTCGGATCAAAAGAATC+CGG | - | Chr2:19733812-19733831 | None:intergenic | 45.0% | |
ATAGTGCTCCTGAAGACAAG+AGG | + | Chr2:19735180-19735199 | MsG0280007729.01.T01:intron | 45.0% | |
ATCTGAGCTTGTGGAGGATT+TGG | - | Chr2:19733700-19733719 | None:intergenic | 45.0% | |
CTTTCTTGAAGAGCCCACTA+CGG | - | Chr2:19733204-19733223 | None:intergenic | 45.0% | |
GACTCAGATCAACCAACTAC+TGG | + | Chr2:19733426-19733445 | MsG0280007729.01.T01:CDS | 45.0% | |
GATGGAAACATCTGAGCTTG+TGG | - | Chr2:19733709-19733728 | None:intergenic | 45.0% | |
GTGAGCCTCAATGAATTGCA+TGG | - | Chr2:19733371-19733390 | None:intergenic | 45.0% | |
GTGGACACAAAACAGAGTAG+TGG | - | Chr2:19735498-19735517 | None:intergenic | 45.0% | |
TCGGATCAAAAGAATCCGGA+GGG | - | Chr2:19733808-19733827 | None:intergenic | 45.0% | |
TCTTCTCGATGTCCAGTAGT+TGG | - | Chr2:19733441-19733460 | None:intergenic | 45.0% | |
TGGTGAAATGGCTTCTGATG+AGG | - | Chr2:19735277-19735296 | None:intergenic | 45.0% | |
TTCAACAATATGGGCGGATG+AGG | + | Chr2:19733772-19733791 | MsG0280007729.01.T01:intron | 45.0% | |
! | AAACAGAGTAGTGGAGAAGG+TGG | - | Chr2:19735489-19735508 | None:intergenic | 45.0% |
! | AGGCGACTGAGACTCAATTT+TGG | + | Chr2:19733491-19733510 | MsG0280007729.01.T01:CDS | 45.0% |
! | ATGATGGAGAGGCATGTTAG+AGG | - | Chr2:19733674-19733693 | None:intergenic | 45.0% |
! | CGACTGAGACTCAATTTTGG+TGG | + | Chr2:19733494-19733513 | MsG0280007729.01.T01:CDS | 45.0% |
! | CTTTGAAGAGACGTGTCAGA+TGG | - | Chr2:19734685-19734704 | None:intergenic | 45.0% |
! | TCCCGTTGATGGGATGAATA+GGG | + | Chr2:19733522-19733541 | MsG0280007729.01.T01:CDS | 45.0% |
! | TGTTTTCTCACCTGGAGAGA+AGG | + | Chr2:19733267-19733286 | MsG0280007729.01.T01:CDS | 45.0% |
!! | CTTCAGGAGCACTATTCTTC+AGG | - | Chr2:19735175-19735194 | None:intergenic | 45.0% |
!! | GGATTTGGTTGATGATGGAG+AGG | - | Chr2:19733685-19733704 | None:intergenic | 45.0% |
!! | GTGGAGGATTTGGTTGATGA+TGG | - | Chr2:19733690-19733709 | None:intergenic | 45.0% |
!!! | ATGGTACCATTGTTTTGGGG+TGG | - | Chr2:19733352-19733371 | None:intergenic | 45.0% |
!!! | GCTCTTGTTGTTTTCTCACC+TGG | + | Chr2:19733259-19733278 | MsG0280007729.01.T01:CDS | 45.0% |
!!! | TGGTACCATTGTTTTGGGGT+GGG | - | Chr2:19733351-19733370 | None:intergenic | 45.0% |
!! | ATTATTTATTATTTGAATAA+AGG | + | Chr2:19734031-19734050 | MsG0280007729.01.T01:intron | 5.0% |
!! | TTATTTATTATTTGAATAAA+GGG | + | Chr2:19734032-19734051 | MsG0280007729.01.T01:intron | 5.0% |
AACAATATGGGCGGATGAGG+TGG | + | Chr2:19733775-19733794 | MsG0280007729.01.T01:intron | 50.0% | |
AGCAACATCTGCACCACAGA+GGG | - | Chr2:19733242-19733261 | None:intergenic | 50.0% | |
CGCCTGCATAGATGTTCCTT+TGG | + | Chr2:19735554-19735573 | MsG0280007729.01.T01:CDS | 50.0% | |
CGTTAGACCAAACCTCTCGT+TGG | + | Chr2:19734361-19734380 | MsG0280007729.01.T01:intron | 50.0% | |
CTCGGATCAAAAGAATCCGG+AGG | - | Chr2:19733809-19733828 | None:intergenic | 50.0% | |
CTTCTGGACCTCTTGTCTTC+AGG | - | Chr2:19735191-19735210 | None:intergenic | 50.0% | |
GCCCTATTCATCCCATCAAC+GGG | - | Chr2:19733526-19733545 | None:intergenic | 50.0% | |
GGAAACATCTGAGCTTGTGG+AGG | - | Chr2:19733706-19733725 | None:intergenic | 50.0% | |
GGCATCTTAAGGCGGATCTA+AGG | - | Chr2:19733832-19733851 | None:intergenic | 50.0% | |
GGCCCTATTCATCCCATCAA+CGG | - | Chr2:19733527-19733546 | None:intergenic | 50.0% | |
TGAAGCTTAGACGCTCCTGA+AGG | + | Chr2:19735084-19735103 | MsG0280007729.01.T01:intron | 50.0% | |
TGACCGTATCAACATTGGGG+TGG | - | Chr2:19733306-19733325 | None:intergenic | 50.0% | |
TGGCCACCCCAATGTTGATA+CGG | + | Chr2:19733300-19733319 | MsG0280007729.01.T01:CDS | 50.0% | |
TTCAGGAGCAGATTGCCTTC+AGG | - | Chr2:19735102-19735121 | None:intergenic | 50.0% | |
TTCAGGAGCGGCTTTACTTC+AGG | - | Chr2:19735138-19735157 | None:intergenic | 50.0% | |
TTGACACGGGCATCTTAAGG+CGG | - | Chr2:19733840-19733859 | None:intergenic | 50.0% | |
! | AGTATTGAGCTCACGCACGT+TGG | - | Chr2:19733401-19733420 | None:intergenic | 50.0% |
! | CTTAAGGCGGATCTAAGGCT+CGG | - | Chr2:19733827-19733846 | None:intergenic | 50.0% |
! | GCTTCTGATGATGCAGCTTC+TGG | - | Chr2:19735207-19735226 | None:intergenic | 50.0% |
! | GTCCCGTTGATGGGATGAAT+AGG | + | Chr2:19733521-19733540 | MsG0280007729.01.T01:CDS | 50.0% |
!! | CAGGAGCGCTTATTCTCTTC+AGG | - | Chr2:19735119-19735138 | None:intergenic | 50.0% |
AGATCTGAGCCACTTGCGCA+AGG | + | Chr2:19733471-19733490 | MsG0280007729.01.T01:CDS | 55.0% | |
AGTGAGCTTTGCACCCTCTG+TGG | + | Chr2:19733226-19733245 | MsG0280007729.01.T01:CDS | 55.0% | |
ATGCAGGCGAAGCCGTATTC+TGG | - | Chr2:19735543-19735562 | None:intergenic | 55.0% | |
ATGGGCGGATGAGGTGGATA+TGG | + | Chr2:19733781-19733800 | MsG0280007729.01.T01:intron | 55.0% | |
GAGCAACATCTGCACCACAG+AGG | - | Chr2:19733243-19733262 | None:intergenic | 55.0% | |
TGAGGTGGATATGGACCCTC+CGG | + | Chr2:19733790-19733809 | MsG0280007729.01.T01:intron | 55.0% | |
! | ACAGAGGGTGCAAAGCTCAC+TGG | - | Chr2:19733227-19733246 | None:intergenic | 55.0% |
!! | ACTTTCTCGAAGCGCCGTAG+TGG | + | Chr2:19733187-19733206 | MsG0280007729.01.T01:CDS | 55.0% |
!! | CTTTCTCGAAGCGCCGTAGT+GGG | + | Chr2:19733188-19733207 | MsG0280007729.01.T01:CDS | 55.0% |
CGGGTCCCACCCCAAAACAA+TGG | + | Chr2:19733343-19733362 | MsG0280007729.01.T01:CDS | 60.0% | |
TCTCAGTCGCCTTGCGCAAG+TGG | - | Chr2:19733483-19733502 | None:intergenic | 60.0% | |
! | GGTGGGCTTGTCCCGTTGAT+GGG | + | Chr2:19733512-19733531 | MsG0280007729.01.T01:CDS | 60.0% |
!! | GGGTTTGAGTAGGAGCACCC+TGG | - | Chr2:19733624-19733643 | None:intergenic | 60.0% |
!! | TGGTGGGCTTGTCCCGTTGA+TGG | + | Chr2:19733511-19733530 | MsG0280007729.01.T01:CDS | 60.0% |
GCTCACGCACGTTGGCGCTA+CGG | - | Chr2:19733393-19733412 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 19733160 | 19735644 | 19733160 | ID=MsG0280007729.01;Name=MsG0280007729.01 |
Chr2 | mRNA | 19733160 | 19735644 | 19733160 | ID=MsG0280007729.01.T01;Parent=MsG0280007729.01;Name=MsG0280007729.01.T01;_AED=0.41;_eAED=0.70;_QI=0|0|0|1|1|1|2|0|308 |
Chr2 | exon | 19733160 | 19733625 | 19733160 | ID=MsG0280007729.01.T01:exon:10246;Parent=MsG0280007729.01.T01 |
Chr2 | exon | 19735184 | 19735644 | 19735184 | ID=MsG0280007729.01.T01:exon:10247;Parent=MsG0280007729.01.T01 |
Chr2 | CDS | 19733160 | 19733625 | 19733160 | ID=MsG0280007729.01.T01:cds;Parent=MsG0280007729.01.T01 |
Chr2 | CDS | 19735184 | 19735644 | 19735184 | ID=MsG0280007729.01.T01:cds;Parent=MsG0280007729.01.T01 |
Gene Sequence |
Protein sequence |