AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007762.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007762.01.T01 MTR_2g031620 96.815 157 5 0 13 169 531 687 1.65e-109 327
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007762.01.T01 AT1G30680 76.316 152 36 0 13 164 542 693 3.06e-81 254

Find 65 sgRNAs with CRISPR-Local

Find 131 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGAACCCACTTTATATT+TGG 0.181500 2:+20210787 None:intergenic
TTTAAAGAGAATTACATATT+TGG 0.231007 2:+20210682 None:intergenic
ACTGTATAATATCATAATTT+TGG 0.259792 2:-20209053 MsG0280007762.01.T01:three_prime_UTR
TTGGGCAAAGCGTTTAATTA+AGG 0.281784 2:+20209926 None:intergenic
GAATTGTTATTCATCGTAAT+CGG 0.303069 2:-20209697 MsG0280007762.01.T01:CDS
CCTATAAAAGGACAACTAAA+TGG 0.320160 2:+20209016 None:intergenic
GTAACACTAACACCTATAAA+AGG 0.321397 2:+20209004 None:intergenic
ATTTACTTTCGCAGGGTAAC+TGG 0.335988 2:-20209266 MsG0280007762.01.T01:intron
CGACCTTATTTCTCACCTTC+CGG 0.339307 2:+20209543 None:intergenic
AACATCATGGATGCCATGTT+TGG 0.367840 2:-20209905 MsG0280007762.01.T01:CDS
TCATCTCATAGCTGCACAAT+TGG 0.370606 2:-20209787 MsG0280007762.01.T01:intron
CCGCTTATATCATAAAGATT+AGG 0.383748 2:+20209752 None:intergenic
AGGCCGTATTGTTGTATAAC+AGG 0.384115 2:-20209505 MsG0280007762.01.T01:intron
CTCACCTGCACTTGATCAAC+AGG 0.399640 2:+20209659 None:intergenic
TGATGATCAAGCTCATTATA+AGG 0.407541 2:+20210712 None:intergenic
AACAACATAGCCATGTTTAG+AGG 0.413826 2:+20209140 None:intergenic
CTATCTCTTGCTATCATCTT+CGG 0.421701 2:+20209235 None:intergenic
GCACAATCATTTGAGATTGA+AGG 0.421811 2:+20208901 None:intergenic
GCAGTCACACAAATGAGTTT+TGG 0.436506 2:-20209210 MsG0280007762.01.T01:three_prime_UTR
AATAAGGTCGCAGGGACAAT+AGG 0.440604 2:-20209530 MsG0280007762.01.T01:CDS
GCCATATATACCAACCTGCC+TGG 0.448721 2:+20209869 None:intergenic
CTTGTATAGTATATAGATAT+AGG 0.449206 2:-20208946 MsG0280007762.01.T01:three_prime_UTR
TGATCAACAGGCCCGGCCTC+AGG 0.458799 2:+20209671 None:intergenic
CATCTCATAGCTGCACAATT+GGG 0.466495 2:-20209786 MsG0280007762.01.T01:intron
TGTCCGGAAGGTGAGAAATA+AGG 0.467744 2:-20209546 MsG0280007762.01.T01:CDS
CATTGCTTCAGGTTTGTGTC+CGG 0.474160 2:-20209562 MsG0280007762.01.T01:intron
CGTAATCGGGATCCTGAGGC+CGG 0.475483 2:-20209683 MsG0280007762.01.T01:CDS
AAAGAGAATTACATATTTGG+AGG 0.479888 2:+20210685 None:intergenic
AATTGTTATTCATCGTAATC+GGG 0.483163 2:-20209696 MsG0280007762.01.T01:CDS
CATAGCTGCACAATTGGGTT+GGG 0.484861 2:-20209781 MsG0280007762.01.T01:intron
AACATGGCATCCATGATGTT+GGG 0.486362 2:+20209908 None:intergenic
ACTACTTGGCTGTTAATACT+AGG 0.492546 2:-20210828 MsG0280007762.01.T01:CDS
AAACGCTTTGCCCAACATCA+TGG 0.493918 2:-20209918 MsG0280007762.01.T01:CDS
GTTTAATTAAGGTAAGCATC+TGG 0.496962 2:+20209937 None:intergenic
TCATAGCTGCACAATTGGGT+TGG 0.498544 2:-20209782 MsG0280007762.01.T01:intron
CTATATCTATATACTATACA+AGG 0.498735 2:+20208947 None:intergenic
AAACATGGCATCCATGATGT+TGG 0.499562 2:+20209907 None:intergenic
ATGCTCTTCCAAATATAAAG+TGG 0.499888 2:-20210795 MsG0280007762.01.T01:CDS
GTTTGTAGCACATCCCAGGC+AGG 0.504441 2:-20209883 MsG0280007762.01.T01:intron
CCATATATACCAACCTGCCT+GGG 0.532958 2:+20209870 None:intergenic
TATTATTTACCACATCGATC+CGG 0.535770 2:+20209103 None:intergenic
AAGGTGAGAAATAAGGTCGC+AGG 0.536242 2:-20209539 MsG0280007762.01.T01:CDS
TTTGGTTTGTAGCACATCCC+AGG 0.537981 2:-20209887 MsG0280007762.01.T01:CDS
CGGGCCTGTTGATCAAGTGC+AGG 0.540239 2:-20209663 MsG0280007762.01.T01:intron
ATACCTGTTATACAACAATA+CGG 0.553186 2:+20209502 None:intergenic
CTTATATCATAAAGATTAGG+AGG 0.567765 2:+20209755 None:intergenic
TTTATAAATAAGTGTGACAA+TGG 0.568385 2:-20209719 MsG0280007762.01.T01:CDS
GCTTCAGGTTTGTGTCCGGA+AGG 0.581145 2:-20209558 MsG0280007762.01.T01:intron
GTATTAAGACACGGGGTGCG+TGG 0.581312 2:-20210748 MsG0280007762.01.T01:CDS
CCTAATCTTTATGATATAAG+CGG 0.581671 2:-20209752 MsG0280007762.01.T01:CDS
GTAATCGGGATCCTGAGGCC+GGG 0.586633 2:-20209682 MsG0280007762.01.T01:CDS
TGCTCTTCCAAATATAAAGT+GGG 0.597225 2:-20210794 MsG0280007762.01.T01:CDS
AAGCAGCTGTATTAAGACAC+GGG 0.597710 2:-20210756 MsG0280007762.01.T01:CDS
CTGCACTTGATCAACAGGCC+CGG 0.599454 2:+20209664 None:intergenic
TCATCGTAATCGGGATCCTG+AGG 0.612531 2:-20209687 MsG0280007762.01.T01:CDS
TAAATAATAACATCTTAACA+AGG 0.612782 2:-20209089 MsG0280007762.01.T01:three_prime_UTR
AGGTGAGAAATAAGGTCGCA+GGG 0.625704 2:-20209538 MsG0280007762.01.T01:CDS
AAAGCAGCTGTATTAAGACA+CGG 0.632991 2:-20210757 MsG0280007762.01.T01:CDS
GATGTGCTACAAACCAAACA+TGG 0.643337 2:+20209892 None:intergenic
TGACTGTATACTGGTCAGCA+TGG 0.643739 2:-20209185 MsG0280007762.01.T01:three_prime_UTR
AAAGTTATCACCTCTAAACA+TGG 0.655982 2:-20209150 MsG0280007762.01.T01:three_prime_UTR
AAATAATAACATCTTAACAA+GGG 0.658651 2:-20209088 MsG0280007762.01.T01:three_prime_UTR
TTTGAGGTGCCGGATCGATG+TGG 0.663012 2:-20209112 MsG0280007762.01.T01:three_prime_UTR
GGTCGCAGGGACAATAGGTG+AGG 0.674790 2:-20209525 MsG0280007762.01.T01:CDS
AGCAGCTGTATTAAGACACG+GGG 0.712601 2:-20210755 MsG0280007762.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATAATAAATTTTAAAT+AGG + Chr2:20209891-20209910 None:intergenic 0.0%
!! ATAAGCAATATATTTAATTA+TGG + Chr2:20209699-20209718 None:intergenic 10.0%
!! AAAATTGAAATACTCAATAA+AGG - Chr2:20209176-20209195 MsG0280007762.01.T01:three_prime_UTR 15.0%
!! AAATAATAACATCTTAACAA+GGG - Chr2:20210622-20210641 MsG0280007762.01.T01:intron 15.0%
!! TAAATAATAACATCTTAACA+AGG - Chr2:20210621-20210640 MsG0280007762.01.T01:intron 15.0%
!! TTTAAAGAGAATTACATATT+TGG + Chr2:20209031-20209050 None:intergenic 15.0%
!!! ACTGTATAATATCATAATTT+TGG - Chr2:20210657-20210676 MsG0280007762.01.T01:intron 15.0%
!!! TGACATTATTTTCTAAATTT+TGG - Chr2:20210080-20210099 MsG0280007762.01.T01:intron 15.0%
!! CTATATCTATATACTATACA+AGG + Chr2:20210766-20210785 None:intergenic 20.0%
!! CTTGATTGTTTCATAAAAAT+GGG + Chr2:20210385-20210404 None:intergenic 20.0%
!! CTTGTATAGTATATAGATAT+AGG - Chr2:20210764-20210783 MsG0280007762.01.T01:CDS 20.0%
!! TAAATAGGTAAAATAGCAAT+AGG + Chr2:20209876-20209895 None:intergenic 20.0%
!! TTTATAAATAAGTGTGACAA+TGG - Chr2:20209991-20210010 MsG0280007762.01.T01:intron 20.0%
!!! ATCCTTTTATACAAATTCAT+AGG + Chr2:20209138-20209157 None:intergenic 20.0%
! AAAAGCTAGCATAAAAAGTA+AGG + Chr2:20209326-20209345 None:intergenic 25.0%
! AAAGAGAATTACATATTTGG+AGG + Chr2:20209028-20209047 None:intergenic 25.0%
! ATAAAAAGTAAGGATTGCTT+AGG + Chr2:20209316-20209335 None:intergenic 25.0%
! ATACCTGTTATACAACAATA+CGG + Chr2:20210211-20210230 None:intergenic 25.0%
! CAGATTACATTAAAGAAACA+CGG + Chr2:20210416-20210435 None:intergenic 25.0%
! CCTAATCTTTATGATATAAG+CGG - Chr2:20209958-20209977 MsG0280007762.01.T01:CDS 25.0%
! CTCCTATGAATTTGTATAAA+AGG - Chr2:20209133-20209152 MsG0280007762.01.T01:three_prime_UTR 25.0%
! CTTATATCATAAAGATTAGG+AGG + Chr2:20209958-20209977 None:intergenic 25.0%
! GCTTGATTGTTTCATAAAAA+TGG + Chr2:20210386-20210405 None:intergenic 25.0%
! TGTTTCTTTAATGTAATCTG+TGG - Chr2:20210416-20210435 MsG0280007762.01.T01:intron 25.0%
! TTCGTTCGTTATAAAACAAA+AGG - Chr2:20210291-20210310 MsG0280007762.01.T01:intron 25.0%
!! AAAATTTTACTTGCGAAAAC+AGG + Chr2:20210362-20210381 None:intergenic 25.0%
!! AATTGTTATTCATCGTAATC+GGG - Chr2:20210014-20210033 MsG0280007762.01.T01:intron 25.0%
!! AGGCTTTATAATGATTAGTT+TGG + Chr2:20209296-20209315 None:intergenic 25.0%
!! GAATTGTTATTCATCGTAAT+CGG - Chr2:20210013-20210032 MsG0280007762.01.T01:intron 25.0%
!! TAAAGAACTTGTTCTTTACT+TGG - Chr2:20209047-20209066 MsG0280007762.01.T01:three_prime_UTR 25.0%
!!! AATCTATGAAACTTGTTTTG+TGG + Chr2:20209612-20209631 None:intergenic 25.0%
!!! ATTTTGTTTCAAAAACTTGC+AGG - Chr2:20209730-20209749 MsG0280007762.01.T01:CDS 25.0%
!!! CTTGGATTTTATTTTGCTTA+TGG - Chr2:20209065-20209084 MsG0280007762.01.T01:three_prime_UTR 25.0%
!!! GTAATTGTTTTAACCATAGA+AGG - Chr2:20209657-20209676 MsG0280007762.01.T01:intron 25.0%
!!! TTACTTTTTATGCTAGCTTT+TGG - Chr2:20209325-20209344 MsG0280007762.01.T01:intron 25.0%
AAAGTTATCACCTCTAAACA+TGG - Chr2:20210560-20210579 MsG0280007762.01.T01:intron 30.0%
AGCATAGTGATATAAAGATG+TGG - Chr2:20209270-20209289 MsG0280007762.01.T01:intron 30.0%
ATAAAAGCAGCACATAATCA+AGG + Chr2:20210246-20210265 None:intergenic 30.0%
ATGCTCTTCCAAATATAAAG+TGG - Chr2:20208915-20208934 MsG0280007762.01.T01:three_prime_UTR 30.0%
ATTAAAGAAACACGGCTAAT+AGG + Chr2:20210408-20210427 None:intergenic 30.0%
CCGCTTATATCATAAAGATT+AGG + Chr2:20209961-20209980 None:intergenic 30.0%
CCTATAAAAGGACAACTAAA+TGG + Chr2:20210697-20210716 None:intergenic 30.0%
CTCATATCTAGTGTGAAATT+TGG + Chr2:20209444-20209463 None:intergenic 30.0%
GTAACACTAACACCTATAAA+AGG + Chr2:20210709-20210728 None:intergenic 30.0%
GTTTAATTAAGGTAAGCATC+TGG + Chr2:20209776-20209795 None:intergenic 30.0%
TAAAAGCAGCACATAATCAA+GGG + Chr2:20210245-20210264 None:intergenic 30.0%
TATTATTTACCACATCGATC+CGG + Chr2:20210610-20210629 None:intergenic 30.0%
TCAAGAACCCACTTTATATT+TGG + Chr2:20208926-20208945 None:intergenic 30.0%
TGATGATCAAGCTCATTATA+AGG + Chr2:20209001-20209020 None:intergenic 30.0%
TGCTCTTCCAAATATAAAGT+GGG - Chr2:20208916-20208935 MsG0280007762.01.T01:three_prime_UTR 30.0%
TTGAAATTTGTGACCTTCTA+TGG + Chr2:20209673-20209692 None:intergenic 30.0%
! CCATTTAGTTGTCCTTTTAT+AGG - Chr2:20210694-20210713 MsG0280007762.01.T01:intron 30.0%
!!! GTGCTGCTTTTATTCATTTA+TGG - Chr2:20210253-20210272 MsG0280007762.01.T01:intron 30.0%
AAAGCAGCTGTATTAAGACA+CGG - Chr2:20208953-20208972 MsG0280007762.01.T01:three_prime_UTR 35.0%
AACAACATAGCCATGTTTAG+AGG + Chr2:20210573-20210592 None:intergenic 35.0%
AAGGATAACTCCAAAACTGT+AGG - Chr2:20209195-20209214 MsG0280007762.01.T01:three_prime_UTR 35.0%
AATCTCAACAAATACCTCTC+AGG + Chr2:20209475-20209494 None:intergenic 35.0%
ACTACTTGGCTGTTAATACT+AGG - Chr2:20208882-20208901 MsG0280007762.01.T01:three_prime_UTR 35.0%
AGGATAACTCCAAAACTGTA+GGG - Chr2:20209196-20209215 MsG0280007762.01.T01:three_prime_UTR 35.0%
AGTGTGAAATTTGGCACATT+GGG + Chr2:20209435-20209454 None:intergenic 35.0%
GGTTACTATTTACTTTCGCA+GGG - Chr2:20210437-20210456 MsG0280007762.01.T01:intron 35.0%
TAGTGTGAAATTTGGCACAT+TGG + Chr2:20209436-20209455 None:intergenic 35.0%
TATCACTATGCTTCAACTTG+AGG + Chr2:20209262-20209281 None:intergenic 35.0%
TGAAAATGTGCAATGCATCT+TGG - Chr2:20209583-20209602 MsG0280007762.01.T01:intron 35.0%
TGGGCATTTGTAAGACAAAA+CGG + Chr2:20209416-20209435 None:intergenic 35.0%
TGGTTACTATTTACTTTCGC+AGG - Chr2:20210436-20210455 MsG0280007762.01.T01:intron 35.0%
TGTTTCAAAAACTTGCAGGA+CGG - Chr2:20209734-20209753 MsG0280007762.01.T01:CDS 35.0%
! ATCACTTATCCCTACAGTTT+TGG + Chr2:20209208-20209227 None:intergenic 35.0%
! CTATCTCTTGCTATCATCTT+CGG + Chr2:20210478-20210497 None:intergenic 35.0%
! GCACAATCATTTGAGATTGA+AGG + Chr2:20210812-20210831 None:intergenic 35.0%
! TTGGGCAAAGCGTTTAATTA+AGG + Chr2:20209787-20209806 None:intergenic 35.0%
!! GTTTTGGTATGACTGTATAC+TGG - Chr2:20210516-20210535 MsG0280007762.01.T01:intron 35.0%
!!! GCTATGTTGTTTTCACTTTG+AGG - Chr2:20210582-20210601 MsG0280007762.01.T01:intron 35.0%
!!! TTAATACAGCTGCTTTTGCA+AGG + Chr2:20208949-20208968 None:intergenic 35.0%
!!! TTTTTTTGGGGTCCAATCTT+GGG - Chr2:20209390-20209409 MsG0280007762.01.T01:intron 35.0%
!!! TTTTTTTTGGGGTCCAATCT+TGG - Chr2:20209389-20209408 MsG0280007762.01.T01:intron 35.0%
AAACATGGCATCCATGATGT+TGG + Chr2:20209806-20209825 None:intergenic 40.0%
AACATCATGGATGCCATGTT+TGG - Chr2:20209805-20209824 MsG0280007762.01.T01:intron 40.0%
AACATGGCATCCATGATGTT+GGG + Chr2:20209805-20209824 None:intergenic 40.0%
AAGCAGCTGTATTAAGACAC+GGG - Chr2:20208954-20208973 MsG0280007762.01.T01:three_prime_UTR 40.0%
ACAAGCAAACCAATCACATG+AGG + Chr2:20209549-20209568 None:intergenic 40.0%
AGGCCGTATTGTTGTATAAC+AGG - Chr2:20210205-20210224 MsG0280007762.01.T01:intron 40.0%
ATTTACTTTCGCAGGGTAAC+TGG - Chr2:20210444-20210463 MsG0280007762.01.T01:intron 40.0%
CACACTAGATATGAGATCCT+TGG - Chr2:20209449-20209468 MsG0280007762.01.T01:intron 40.0%
CATCTCATAGCTGCACAATT+GGG - Chr2:20209924-20209943 MsG0280007762.01.T01:CDS 40.0%
CGCTATAAACCTCATGTGAT+TGG - Chr2:20209537-20209556 MsG0280007762.01.T01:CDS 40.0%
GATGTGCTACAAACCAAACA+TGG + Chr2:20209821-20209840 None:intergenic 40.0%
TCATCTCATAGCTGCACAAT+TGG - Chr2:20209923-20209942 MsG0280007762.01.T01:CDS 40.0%
TTCAACTTGAGGAGGAGAAT+CGG + Chr2:20209251-20209270 None:intergenic 40.0%
! GCAGTCACACAAATGAGTTT+TGG - Chr2:20210500-20210519 MsG0280007762.01.T01:intron 40.0%
!! GATTTTAGTGCTGCACTACT+TGG - Chr2:20208868-20208887 MsG0280007762.01.T01:three_prime_UTR 40.0%
!! TACTGACTTGTCATTGCTTC+AGG - Chr2:20210137-20210156 MsG0280007762.01.T01:intron 40.0%
!!! TTGTTTTCACTTTGAGGTGC+CGG - Chr2:20210588-20210607 MsG0280007762.01.T01:intron 40.0%
AAACGCTTTGCCCAACATCA+TGG - Chr2:20209792-20209811 MsG0280007762.01.T01:intron 45.0%
AACAAATACCTCTCAGGCCA+AGG + Chr2:20209469-20209488 None:intergenic 45.0%
AAGACAAAACGGCCCAAGAT+TGG + Chr2:20209405-20209424 None:intergenic 45.0%
AAGCGTATGAGTGCCTATTG+AGG - Chr2:20210335-20210354 MsG0280007762.01.T01:intron 45.0%
AAGGTGAGAAATAAGGTCGC+AGG - Chr2:20210171-20210190 MsG0280007762.01.T01:intron 45.0%
AATAAGGTCGCAGGGACAAT+AGG - Chr2:20210180-20210199 MsG0280007762.01.T01:intron 45.0%
AGCAGCTGTATTAAGACACG+GGG - Chr2:20208955-20208974 MsG0280007762.01.T01:three_prime_UTR 45.0%
AGCGTATGAGTGCCTATTGA+GGG - Chr2:20210336-20210355 MsG0280007762.01.T01:intron 45.0%
AGGTGAGAAATAAGGTCGCA+GGG - Chr2:20210172-20210191 MsG0280007762.01.T01:intron 45.0%
CACTATGCTTCAACTTGAGG+AGG + Chr2:20209259-20209278 None:intergenic 45.0%
CATAGCTGCACAATTGGGTT+GGG - Chr2:20209929-20209948 MsG0280007762.01.T01:CDS 45.0%
CCATATATACCAACCTGCCT+GGG + Chr2:20209843-20209862 None:intergenic 45.0%
TCATAGCTGCACAATTGGGT+TGG - Chr2:20209928-20209947 MsG0280007762.01.T01:CDS 45.0%
TGACTGTATACTGGTCAGCA+TGG - Chr2:20210525-20210544 MsG0280007762.01.T01:intron 45.0%
TGTCCGGAAGGTGAGAAATA+AGG - Chr2:20210164-20210183 MsG0280007762.01.T01:intron 45.0%
! CATTGCTTCAGGTTTGTGTC+CGG - Chr2:20210148-20210167 MsG0280007762.01.T01:intron 45.0%
! CGACCTTATTTCTCACCTTC+CGG + Chr2:20210170-20210189 None:intergenic 45.0%
!! TTTGGTTTGTAGCACATCCC+AGG - Chr2:20209823-20209842 MsG0280007762.01.T01:intron 45.0%
!!! AGATTTTTTTTTTTTTTTTT+TGG - Chr2:20209376-20209395 MsG0280007762.01.T01:intron 5.0%
!!! ATTTTTTTTTTTTTTTTTTG+GGG - Chr2:20209378-20209397 MsG0280007762.01.T01:intron 5.0%
!!! GATTTTTTTTTTTTTTTTTT+GGG - Chr2:20209377-20209396 MsG0280007762.01.T01:intron 5.0%
CTCACCTGCACTTGATCAAC+AGG + Chr2:20210054-20210073 None:intergenic 50.0%
GCCATATATACCAACCTGCC+TGG + Chr2:20209844-20209863 None:intergenic 50.0%
TATGAGATCCTTGGCCTGAG+AGG - Chr2:20209458-20209477 MsG0280007762.01.T01:intron 50.0%
TCATCGTAATCGGGATCCTG+AGG - Chr2:20210023-20210042 MsG0280007762.01.T01:intron 50.0%
TGCGAAAACAGGCCCTCAAT+AGG + Chr2:20210351-20210370 None:intergenic 50.0%
!! CCCAGGCAGGTTGGTATATA+TGG - Chr2:20209840-20209859 MsG0280007762.01.T01:intron 50.0%
CTGCACTTGATCAACAGGCC+CGG + Chr2:20210049-20210068 None:intergenic 55.0%
GTATTAAGACACGGGGTGCG+TGG - Chr2:20208962-20208981 MsG0280007762.01.T01:three_prime_UTR 55.0%
GTTTGTAGCACATCCCAGGC+AGG - Chr2:20209827-20209846 MsG0280007762.01.T01:intron 55.0%
! GCTTCAGGTTTGTGTCCGGA+AGG - Chr2:20210152-20210171 MsG0280007762.01.T01:intron 55.0%
!! TTTGAGGTGCCGGATCGATG+TGG - Chr2:20210598-20210617 MsG0280007762.01.T01:intron 55.0%
CGGGCCTGTTGATCAAGTGC+AGG - Chr2:20210047-20210066 MsG0280007762.01.T01:intron 60.0%
CGTAATCGGGATCCTGAGGC+CGG - Chr2:20210027-20210046 MsG0280007762.01.T01:intron 60.0%
GGTCGCAGGGACAATAGGTG+AGG - Chr2:20210185-20210204 MsG0280007762.01.T01:intron 60.0%
GTAATCGGGATCCTGAGGCC+GGG - Chr2:20210028-20210047 MsG0280007762.01.T01:intron 60.0%
GTAGCACATCCCAGGCAGGT+TGG - Chr2:20209831-20209850 MsG0280007762.01.T01:intron 60.0%
TGATCAACAGGCCCGGCCTC+AGG + Chr2:20210042-20210061 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 20208866 20210866 20208866 ID=MsG0280007762.01;Name=MsG0280007762.01
Chr2 mRNA 20208866 20210866 20208866 ID=MsG0280007762.01.T01;Parent=MsG0280007762.01;Name=MsG0280007762.01.T01;_AED=0.49;_eAED=0.51;_QI=0|1|0.8|1|1|1|5|369|169
Chr2 exon 20208866 20209274 20208866 ID=MsG0280007762.01.T01:exon:10412;Parent=MsG0280007762.01.T01
Chr2 exon 20209506 20209573 20209506 ID=MsG0280007762.01.T01:exon:10411;Parent=MsG0280007762.01.T01
Chr2 exon 20209664 20209798 20209664 ID=MsG0280007762.01.T01:exon:10410;Parent=MsG0280007762.01.T01
Chr2 exon 20209884 20209980 20209884 ID=MsG0280007762.01.T01:exon:10409;Parent=MsG0280007762.01.T01
Chr2 exon 20210697 20210866 20210697 ID=MsG0280007762.01.T01:exon:10408;Parent=MsG0280007762.01.T01
Chr2 CDS 20210697 20210866 20210697 ID=MsG0280007762.01.T01:cds;Parent=MsG0280007762.01.T01
Chr2 CDS 20209884 20209980 20209884 ID=MsG0280007762.01.T01:cds;Parent=MsG0280007762.01.T01
Chr2 CDS 20209664 20209798 20209664 ID=MsG0280007762.01.T01:cds;Parent=MsG0280007762.01.T01
Chr2 CDS 20209506 20209573 20209506 ID=MsG0280007762.01.T01:cds;Parent=MsG0280007762.01.T01
Chr2 CDS 20209235 20209274 20209235 ID=MsG0280007762.01.T01:cds;Parent=MsG0280007762.01.T01
Chr2 three_prime_UTR 20208866 20209234 20208866 ID=MsG0280007762.01.T01:three_prime_utr;Parent=MsG0280007762.01.T01
Gene Sequence

>MsG0280007762.01.T01

ATGATTTTAGTGCTGCACTACTTGGCTGTTAATACTAGGTGTGAAGATGATGCTCTTCCAAATATAAAGTGGGTTCTTGACCTTGCAAAAGCAGCTGTATTAAGACACGGGGTGCGTGGACTTGTAATTGATCCTTATAATGAGCTTGATCATCAGCGACCTCCAAATATGACGGAAACTGAATATGTGAGCCAGATGCTTACCTTAATTAAACGCTTTGCCCAACATCATGGATGCCATGTTTGGTTTGTAGCACATCCCAGGCAGCTGCACAATTGGGTTGGGAGTCCTCCTAATCTTTATGATATAAGCGGAAGTGCACACTTTATAAATAAGTGTGACAATGGAATTGTTATTCATCGTAATCGGGATCCTGAGGCCGGGCCTGTTGATCAAGTGCAGGTTTGTGTCCGGAAGGTGAGAAATAAGGTCGCAGGGACAATAGGTGAGGCCGTATTGTTGTATAACAGGGTAACTGGTGAGTACTCCGAAGATGATAGCAAGAGATAG
Protein sequence

>MsG0280007762.01.T01

MILVLHYLAVNTRCEDDALPNIKWVLDLAKAAVLRHGVRGLVIDPYNELDHQRPPNMTETEYVSQMLTLIKRFAQHHGCHVWFVAHPRQLHNWVGSPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGPVDQVQVCVRKVRNKVAGTIGEAVLLYNRVTGEYSEDDSKR*