AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008261.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008261.01.T01 MTR_2g037830 67.039 358 46 5 164 450 336 692 3.64e-152 448
MsG0280008261.01.T01 MTR_2g037830 74.886 219 20 2 1 184 59 277 2.56e-103 322
MsG0280008261.01.T01 MTR_3g450800 51.378 399 120 7 125 450 246 643 2.25e-122 370
MsG0280008261.01.T01 MTR_3g450800 63.470 219 44 3 1 184 11 228 1.57e-81 264
MsG0280008261.01.T01 MTR_0011s0020 56.145 358 85 5 164 450 336 692 2.56e-122 372
MsG0280008261.01.T01 MTR_0011s0020 70.320 219 30 2 1 184 59 277 2.71e-95 301
MsG0280008261.01.T01 MTR_3g005560 53.916 332 86 5 186 450 363 694 2.63e-110 341
MsG0280008261.01.T01 MTR_3g005560 65.596 218 40 2 1 183 59 276 1.01e-85 276
MsG0280008261.01.T01 MTR_2g037830 74.886 219 20 2 1 184 59 277 7.70e-105 322
MsG0280008261.01.T01 MTR_2g037830 54.348 138 32 4 164 271 336 472 6.34e-30 122
MsG0280008261.01.T01 MTR_3g005560 65.596 218 40 2 1 183 59 276 1.20e-88 276
MsG0280008261.01.T01 MTR_3g005560 70.000 60 17 1 186 244 363 422 6.11e-16 80.1
MsG0280008261.01.T01 MTR_3g005560 65.596 218 40 2 1 183 59 276 5.83e-87 276
MsG0280008261.01.T01 MTR_3g005560 55.682 176 54 3 186 337 363 538 8.39e-53 186
MsG0280008261.01.T01 MTR_4g088225 38.865 229 94 4 1 183 72 300 3.64e-47 173
MsG0280008261.01.T01 MTR_4g088225 28.701 331 167 5 185 449 386 713 1.15e-32 131
MsG0280008261.01.T01 MTR_4g088225 38.865 229 94 4 1 183 72 300 3.97e-47 173
MsG0280008261.01.T01 MTR_4g088225 28.701 331 167 5 185 449 386 713 1.33e-32 131
MsG0280008261.01.T01 MTR_1g073740 38.596 228 95 4 1 183 73 300 1.98e-43 162
MsG0280008261.01.T01 MTR_1g073740 25.957 235 132 1 257 449 478 712 6.31e-30 123
MsG0280008261.01.T01 MTR_2g087950 29.915 234 114 5 1 184 62 295 1.13e-24 107
MsG0280008261.01.T01 MTR_3g060280 40.411 146 77 3 2 144 76 214 3.70e-24 104
MsG0280008261.01.T01 MTR_3g060280 40.411 146 77 3 2 144 76 214 5.15e-24 105
MsG0280008261.01.T01 MTR_3g060280 21.667 240 140 3 257 449 477 715 1.54e-13 73.2
MsG0280008261.01.T01 MTR_3g060220 41.781 146 76 4 2 144 66 205 6.71e-24 105
MsG0280008261.01.T01 MTR_3g060220 24.895 237 134 3 257 449 471 707 3.47e-16 81.6
MsG0280008261.01.T01 MTR_3g060280 40.411 146 77 3 2 144 76 214 7.03e-24 104
MsG0280008261.01.T01 MTR_3g060280 40.411 146 77 3 2 144 76 214 7.76e-24 104
MsG0280008261.01.T01 MTR_3g060220 41.497 147 76 4 2 144 66 206 8.91e-24 105
MsG0280008261.01.T01 MTR_3g060220 24.895 237 134 3 257 449 472 708 3.38e-16 81.6
MsG0280008261.01.T01 MTR_3g060240 39.726 146 80 3 2 144 66 206 3.56e-23 103
MsG0280008261.01.T01 MTR_3g060240 23.333 240 137 2 257 449 472 711 1.72e-14 76.3
MsG0280008261.01.T01 MTR_2g087980 30.804 224 104 6 9 183 68 289 5.18e-22 99.8
MsG0280008261.01.T01 MTR_2g087960 29.565 230 104 6 9 183 73 299 1.28e-21 98.2
MsG0280008261.01.T01 MTR_2g087900 34.899 149 88 4 2 144 65 210 1.87e-21 94.4
MsG0280008261.01.T01 MTR_2g087960 29.565 230 104 6 9 183 73 299 2.27e-21 97.4
MsG0280008261.01.T01 MTR_2g087900 34.899 149 88 4 2 144 65 210 5.82e-21 94.4
MsG0280008261.01.T01 MTR_2g087900 34.899 149 88 4 2 144 65 210 2.20e-20 94.0
MsG0280008261.01.T01 MTR_2g087900 34.899 149 88 4 2 144 65 210 2.76e-20 94.0
MsG0280008261.01.T01 MTR_2g087900 34.899 149 88 4 2 144 65 210 2.87e-20 94.4
MsG0280008261.01.T01 MTR_4g050000 30.472 233 109 7 2 183 63 293 8.50e-20 92.8
MsG0280008261.01.T01 MTR_7g106680 27.181 298 144 9 2 226 272 569 1.20e-19 92.4
MsG0280008261.01.T01 MTR_2g016630 28.862 246 110 6 2 182 224 469 1.42e-19 92.4
MsG0280008261.01.T01 MTR_3g107520 25.839 298 144 9 2 224 324 619 1.94e-19 92.0
MsG0280008261.01.T01 MTR_8g086600 25.503 298 145 9 2 224 239 534 5.46e-19 90.5
MsG0280008261.01.T01 MTR_5g029190 36.220 127 78 3 21 145 342 467 5.75e-18 87.4
MsG0280008261.01.T01 MTR_8g092590 32.903 155 90 4 2 145 332 483 5.76e-18 87.4
MsG0280008261.01.T01 MTR_3g030040 32.237 152 95 2 2 145 314 465 8.47e-18 87.0
MsG0280008261.01.T01 MTR_7g116230 35.659 129 76 2 21 145 219 344 1.82e-17 85.9
MsG0280008261.01.T01 MTR_4g130510 34.641 153 86 4 2 143 294 443 2.12e-17 85.5
MsG0280008261.01.T01 MTR_4g130510 34.641 153 86 4 2 143 294 443 2.16e-17 85.5
MsG0280008261.01.T01 MTR_8g063270 33.987 153 87 5 2 143 43 192 4.18e-17 84.3
MsG0280008261.01.T01 MTR_8g063270 22.727 330 178 11 190 448 411 734 1.51e-14 76.6
MsG0280008261.01.T01 MTR_4g130510 34.641 153 86 4 2 143 294 443 4.42e-17 84.3
MsG0280008261.01.T01 MTR_4g077910 30.168 179 108 5 2 166 332 507 4.53e-17 84.7
MsG0280008261.01.T01 MTR_1g069605 25.418 299 144 9 2 224 154 449 6.05e-17 84.0
MsG0280008261.01.T01 MTR_1g039480 29.299 157 98 2 2 145 318 474 6.80e-17 84.0
MsG0280008261.01.T01 MTR_4g130510 34.641 153 86 4 2 143 294 443 7.00e-17 83.6
MsG0280008261.01.T01 MTR_8g063270 33.987 153 87 5 2 143 248 397 1.02e-16 83.6
MsG0280008261.01.T01 MTR_8g063270 23.653 334 170 11 190 448 616 939 1.86e-14 76.3
MsG0280008261.01.T01 MTR_2g438220 31.081 148 94 3 21 163 249 393 1.21e-16 83.2
MsG0280008261.01.T01 MTR_1g098550 32.000 150 94 2 2 143 334 483 1.38e-16 83.2
MsG0280008261.01.T01 MTR_1g098550 32.000 150 94 2 2 143 330 479 1.43e-16 83.2
MsG0280008261.01.T01 MTR_1g039445 30.000 160 93 3 2 145 304 460 5.87e-16 81.3
MsG0280008261.01.T01 MTR_8g037260 30.263 152 98 2 2 145 314 465 1.36e-15 80.1
MsG0280008261.01.T01 MTR_3g007770 31.481 162 97 4 2 152 281 439 2.13e-15 79.3
MsG0280008261.01.T01 MTR_2g035780 32.026 153 90 4 2 143 265 414 3.29e-15 79.0
MsG0280008261.01.T01 MTR_7g109200 33.582 134 73 4 2 122 356 486 3.73e-15 78.6
MsG0280008261.01.T01 MTR_3g091270 34.454 119 75 3 21 137 100 217 2.58e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008261.01.T01 AT4G24000 24.448 634 278 15 1 443 67 690 9.58e-47 172
MsG0280008261.01.T01 AT4G23990 37.671 146 81 3 1 144 89 226 1.42e-25 110
MsG0280008261.01.T01 AT4G23990 23.642 313 170 7 198 443 409 719 1.20e-18 89.4
MsG0280008261.01.T01 AT4G24010 25.641 312 163 7 205 449 397 706 1.88e-23 103
MsG0280008261.01.T01 AT4G24010 35.616 146 84 3 1 144 70 207 1.94e-22 100
MsG0280008261.01.T01 AT4G24000 22.826 460 209 11 118 443 51 498 1.01e-22 101
MsG0280008261.01.T01 AT2G32530 36.913 149 83 5 1 144 64 206 1.27e-21 98.6
MsG0280008261.01.T01 AT2G32540 36.486 148 85 4 1 144 64 206 3.88e-21 97.1
MsG0280008261.01.T01 AT2G32620 36.242 149 84 5 1 144 64 206 7.38e-21 95.9
MsG0280008261.01.T01 AT2G32620 36.242 149 84 5 1 144 64 206 8.16e-21 95.9
MsG0280008261.01.T01 AT2G32620 36.242 149 84 5 1 144 64 206 8.69e-21 95.5
MsG0280008261.01.T01 AT2G32610 36.552 145 76 5 8 144 71 207 1.30e-19 92.4
MsG0280008261.01.T01 AT5G09870 26.510 298 142 9 2 224 307 602 1.50e-19 92.4
MsG0280008261.01.T01 AT4G15320 36.000 150 83 6 1 144 64 206 1.99e-19 91.7
MsG0280008261.01.T01 AT4G15320 36.000 150 83 6 1 144 64 206 2.10e-19 91.7
MsG0280008261.01.T01 AT4G15320 36.000 150 83 6 1 144 64 206 2.97e-19 91.3
MsG0280008261.01.T01 AT1G55850 34.247 146 85 3 2 144 80 217 3.23e-19 90.9
MsG0280008261.01.T01 AT1G55850 33.010 103 69 0 257 359 469 571 6.69e-12 68.2
MsG0280008261.01.T01 AT5G44030 24.425 348 172 11 2 261 287 631 4.91e-19 90.9
MsG0280008261.01.T01 AT5G44030 24.425 348 172 11 2 261 258 602 6.18e-19 90.5
MsG0280008261.01.T01 AT4G23990 23.642 313 170 7 198 443 195 505 6.65e-19 89.7
MsG0280008261.01.T01 AT4G15320 37.692 130 74 4 1 125 64 191 2.35e-18 88.6
MsG0280008261.01.T01 AT5G05170 25.926 297 145 10 2 224 302 597 2.36e-18 88.6
MsG0280008261.01.T01 AT4G15320 37.692 130 74 4 1 125 64 191 2.40e-18 88.6
MsG0280008261.01.T01 AT5G17420 26.174 298 143 9 2 224 281 576 2.49e-18 88.6
MsG0280008261.01.T01 AT4G18780 34.247 146 88 2 2 139 227 372 3.35e-18 88.2
MsG0280008261.01.T01 AT2G33100 34.127 126 82 1 21 145 257 382 4.35e-18 87.8
MsG0280008261.01.T01 AT2G33100 34.127 126 82 1 21 145 257 382 4.35e-18 87.8
MsG0280008261.01.T01 AT4G39350 26.174 298 143 10 2 224 320 615 6.39e-18 87.4
MsG0280008261.01.T01 AT2G25540 27.642 246 113 6 2 182 298 543 9.04e-18 86.7
MsG0280008261.01.T01 AT5G64740 26.846 298 141 10 2 224 319 614 1.03e-17 86.7
MsG0280008261.01.T01 AT5G44030 24.684 316 154 10 27 261 11 323 3.07e-17 85.1
MsG0280008261.01.T01 AT2G32620 39.474 114 63 3 33 144 1 110 5.02e-17 84.3
MsG0280008261.01.T01 AT4G32410 25.168 298 146 9 2 224 318 613 7.93e-17 84.0
MsG0280008261.01.T01 AT4G38190 34.161 161 85 5 2 145 315 471 8.83e-17 84.0
MsG0280008261.01.T01 AT3G03050 29.670 182 111 5 2 169 337 515 9.93e-17 83.6
MsG0280008261.01.T01 AT4G15290 33.108 148 90 5 1 144 64 206 4.06e-16 81.6
MsG0280008261.01.T01 AT1G32180 34.127 126 80 3 20 143 195 319 4.19e-16 81.6
MsG0280008261.01.T01 AT1G32180 34.127 126 80 3 20 143 195 319 4.19e-16 81.6
MsG0280008261.01.T01 AT2G21770 32.667 150 93 2 2 143 325 474 7.63e-16 80.9
MsG0280008261.01.T01 AT5G16910 26.816 179 114 4 2 166 340 515 2.56e-15 79.3
MsG0280008261.01.T01 AT1G02730 36.538 104 62 2 20 122 391 491 1.64e-14 76.6

Find 94 sgRNAs with CRISPR-Local

Find 481 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAATATTGTTTGCTTCTT+TGG 0.079838 2:-28170453 MsG0280008261.01.T01:CDS
TTTGCTTCTTTGGTGGTTTA+TGG 0.157159 2:-28170443 MsG0280008261.01.T01:CDS
AGGTTCTCCTATTACTCTTT+TGG 0.225104 2:-28176948 MsG0280008261.01.T01:CDS
TGATTACAGCTTAGGGTATC+AGG 0.238209 2:-28172541 MsG0280008261.01.T01:intron
GTCACCATACAAAGATTCTT+TGG 0.260388 2:+28174387 None:intergenic
TTGGGTTGCTTCCGAAGTTT+TGG 0.268644 2:+28174406 None:intergenic
TAAATAGAAAGTTTATTAGA+AGG 0.272530 2:+28176986 None:intergenic
TCCTATGAGAGAACACAAAT+TGG 0.273495 2:-28171435 MsG0280008261.01.T01:CDS
AAATATAGTCCATTCACTTA+TGG 0.291383 2:-28171033 MsG0280008261.01.T01:CDS
TTTAATCCCAAAAGAGTAAT+AGG 0.293844 2:+28176941 None:intergenic
TTCAAATTATTGAATTGTTA+TGG 0.301690 2:-28177358 MsG0280008261.01.T01:five_prime_UTR
CCCAATTTGTGTTCTCTCAT+AGG 0.302755 2:+28171434 None:intergenic
GTTATTCCATACACCCTATA+TGG 0.330435 2:-28170946 MsG0280008261.01.T01:CDS
GAGCCATTACATAACTAATA+AGG 0.332006 2:+28170373 None:intergenic
GTCATAACTGAACGACTTAT+CGG 0.348277 2:+28177133 None:intergenic
CTGAGGAACAATTCCATATA+GGG 0.350405 2:+28170933 None:intergenic
ATTATGTGAGTTCTGCTTAG+AGG 0.352065 2:+28177294 None:intergenic
AGAAGAGAGGGACCAAATTA+AGG 0.356633 2:-28176792 MsG0280008261.01.T01:intron
TTTCTTACCTTTGGAAATAC+AGG 0.359003 2:+28170889 None:intergenic
TCTATTTATCTTTCTGATGA+TGG 0.373219 2:-28176971 MsG0280008261.01.T01:CDS
TGTTATGAACACTGTTGTTT+CGG 0.377293 2:-28177026 MsG0280008261.01.T01:CDS
TCTGAGGAACAATTCCATAT+AGG 0.386390 2:+28170932 None:intergenic
AAGGTTAAACAATGAACAAT+AGG 0.386453 2:+28170997 None:intergenic
AATATTGTTTGCTTCTTTGG+TGG 0.391566 2:-28170450 MsG0280008261.01.T01:CDS
ATTCCTTCTTTCACGTTAGT+TGG 0.391890 2:+28171105 None:intergenic
TCACCATACAAAGATTCTTT+GGG 0.416966 2:+28174388 None:intergenic
CCAACCAAGCGTTCCGTTGG+CGG 0.417470 2:-28177156 MsG0280008261.01.T01:CDS
CCTATGAGAGAACACAAATT+GGG 0.417839 2:-28171434 MsG0280008261.01.T01:CDS
AGTTATGACCGAGAATTTAC+CGG 0.418717 2:-28177119 MsG0280008261.01.T01:CDS
AGTATGAGTAACACAATCAT+TGG 0.420712 2:+28170474 None:intergenic
CTTGATGCTCAAAACAACTT+TGG 0.422960 2:-28171570 MsG0280008261.01.T01:CDS
CTCGTCAGCCGGTAAATTCT+CGG 0.426797 2:+28177111 None:intergenic
TTTCCTTATTAGTTATGTAA+TGG 0.435667 2:-28170376 MsG0280008261.01.T01:CDS
GGGTGTATGGAATAACATAT+AGG 0.436265 2:+28170953 None:intergenic
ACAATTCCATATAGGGTGTA+TGG 0.445306 2:+28170940 None:intergenic
CCTCAGATTTGCTTCTTGAA+AGG 0.447849 2:-28170916 MsG0280008261.01.T01:CDS
AAATAGAAAGTTTATTAGAA+GGG 0.455310 2:+28176987 None:intergenic
CAATCTACGATAAGAACATA+AGG 0.458599 2:+28172502 None:intergenic
ACCGGCTGACGAGAAGTTAC+CGG 0.460020 2:-28177101 MsG0280008261.01.T01:CDS
GTTATAATCCCCTCTAGAAT+AGG 0.460351 2:+28170342 None:intergenic
ACAAAGAAACAGTTCAATCA+TGG 0.465722 2:-28177320 MsG0280008261.01.T01:five_prime_UTR
GGTGTATGGAATAACATATA+GGG 0.472437 2:+28170954 None:intergenic
CCGGCTGACGAGAAGTTACC+GGG 0.475100 2:-28177100 MsG0280008261.01.T01:CDS
CAACCCAAAGAATCTTTGTA+TGG 0.479542 2:-28174391 MsG0280008261.01.T01:CDS
CGATGGTGCAGCGTTGCTCA+TGG 0.481187 2:-28170499 MsG0280008261.01.T01:CDS
GATAAAATGCTGAATCTGAC+TGG 0.483140 2:+28170720 None:intergenic
ATTTATTTATTTCATATCCA+TGG 0.484294 2:-28177224 MsG0280008261.01.T01:five_prime_UTR
CCCGGTAACTTCTCGTCAGC+CGG 0.486188 2:+28177100 None:intergenic
AAATAAATAAATTGTTGATA+CGG 0.486840 2:+28177235 None:intergenic
CTTGAAAGTCCATAAGTGAA+TGG 0.490494 2:+28171024 None:intergenic
TCGGCCGCCAACGGAACGCT+TGG 0.491222 2:+28177152 None:intergenic
TACGCAAAAGAAATATGAGC+AGG 0.495327 2:-28170535 MsG0280008261.01.T01:CDS
GAATGAGTCAGTTGATAAAG+TGG 0.496228 2:-28171086 MsG0280008261.01.T01:CDS
CAGGGTAGGTTTAATTTCGA+TGG 0.500941 2:-28170516 MsG0280008261.01.T01:CDS
CCGCCAACGGAACGCTTGGT+TGG 0.502148 2:+28177156 None:intergenic
TGTTACAGGTTACGGAGCCT+TGG 0.510055 2:-28170771 MsG0280008261.01.T01:intron
TGTTGTTTCGGCTATTGCAA+TGG 0.514401 2:-28177014 MsG0280008261.01.T01:CDS
TTTGTGTGTACGATTGATCC+TGG 0.521798 2:-28177067 MsG0280008261.01.T01:CDS
ATTTATCTTTCTGATGATGG+AGG 0.522537 2:-28176968 MsG0280008261.01.T01:CDS
TTTCCAACCAAGCGTTCCGT+TGG 0.524686 2:-28177159 MsG0280008261.01.T01:CDS
TCTAAGCTATCCTATTCTAG+AGG 0.529147 2:-28170352 MsG0280008261.01.T01:CDS
ATTATAACTATGAAAACAAA+GGG 0.535272 2:-28170327 MsG0280008261.01.T01:CDS
GAAACAAGACACATATGAAG+TGG 0.545782 2:+28177268 None:intergenic
TAAGCTTGACAAGTGACAAA+AGG 0.547809 2:+28170978 None:intergenic
TGGTGACTGATAGACATTCT+CGG 0.549468 2:-28174371 MsG0280008261.01.T01:CDS
CTAAGCTATCCTATTCTAGA+GGG 0.554636 2:-28170351 MsG0280008261.01.T01:CDS
AATCTACGATAAGAACATAA+GGG 0.556072 2:+28172503 None:intergenic
TGATAGACATTCTCGGATTG+AGG 0.558381 2:-28174364 MsG0280008261.01.T01:intron
TGTTTCTTTGTGAAGTGTGA+AGG 0.559771 2:+28177332 None:intergenic
TTTACAAGAAGCATGTGAAG+TGG 0.562845 2:-28171466 MsG0280008261.01.T01:CDS
AATGAGTCAGTTGATAAAGT+GGG 0.576301 2:-28171085 MsG0280008261.01.T01:CDS
GCTCCAACTAACGTGAAAGA+AGG 0.576975 2:-28171108 MsG0280008261.01.T01:CDS
AAAAGAAATATGAGCAGGGT+AGG 0.580819 2:-28170530 MsG0280008261.01.T01:CDS
TAACTATGAAAACAAAGGGT+GGG 0.580904 2:-28170323 MsG0280008261.01.T01:CDS
GCTAGTGTCATTAGAAACCA+TGG 0.581414 2:+28177207 None:intergenic
CACGTGAATTTGAAGAAGAG+AGG 0.582029 2:-28176805 MsG0280008261.01.T01:CDS
ATGGAGACTACTCAATGTGA+GGG 0.586276 2:-28170424 MsG0280008261.01.T01:CDS
AACGACTTATCGGCCGCCAA+CGG 0.594459 2:+28177143 None:intergenic
GATTACAGCTTAGGGTATCA+GGG 0.607803 2:-28172540 MsG0280008261.01.T01:intron
GATTATAACTATGAAAACAA+AGG 0.608756 2:-28170328 MsG0280008261.01.T01:CDS
AGGAATACCTGTATTTCCAA+AGG 0.611812 2:-28170896 MsG0280008261.01.T01:intron
GAGCACATCCCCAAGAAACA+TGG 0.612986 2:+28171127 None:intergenic
ATAACTATGAAAACAAAGGG+TGG 0.613730 2:-28170324 MsG0280008261.01.T01:CDS
CACACAAATATGTCGAGTCC+CGG 0.615872 2:+28177082 None:intergenic
TATGGAGACTACTCAATGTG+AGG 0.626897 2:-28170425 MsG0280008261.01.T01:CDS
ACGTGAATTTGAAGAAGAGA+GGG 0.628850 2:-28176804 MsG0280008261.01.T01:CDS
GTGTTCATAACATCGATCGT+TGG 0.629223 2:+28177037 None:intergenic
CTATGAGAGAACACAAATTG+GGG 0.636514 2:-28171433 MsG0280008261.01.T01:intron
ACGCAAAAGAAATATGAGCA+GGG 0.640748 2:-28170534 MsG0280008261.01.T01:CDS
CCTTTCAAGAAGCAAATCTG+AGG 0.641008 2:+28170916 None:intergenic
GTATCAGGGCTAATCAGCAA+TGG 0.646196 2:-28172526 MsG0280008261.01.T01:CDS
ATTGTAAACACTATAAACCA+AGG 0.659467 2:+28170754 None:intergenic
TAAGCTATCCTATTCTAGAG+GGG 0.672123 2:-28170350 MsG0280008261.01.T01:CDS
GAATCACTGAAAGCAATACG+TGG 0.728981 2:-28171528 MsG0280008261.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATAAATTGTTGATA+CGG + Chr2:28170469-28170488 None:intergenic 10.0%
!! AAATGTTATATTTATCATAT+TGG - Chr2:28176058-28176077 MsG0280008261.01.T01:intron 10.0%
!! ATAATAAAAATACCTTAATT+TGG + Chr2:28170924-28170943 None:intergenic 10.0%
!! TATATATATGGAATTTATAA+TGG - Chr2:28176094-28176113 MsG0280008261.01.T01:intron 10.0%
!! TTAATTTAAAGAAATTTAAG+AGG + Chr2:28175086-28175105 None:intergenic 10.0%
!! TTTGATTAAACAAATAAAAA+TGG - Chr2:28173599-28173618 MsG0280008261.01.T01:intron 10.0%
!!! AAACAACTTAATTTTTTTTT+TGG - Chr2:28171035-28171054 MsG0280008261.01.T01:CDS 10.0%
!!! ACATTTTATGTATTTATATT+AGG - Chr2:28174667-28174686 MsG0280008261.01.T01:intron 10.0%
!!! ATTTGTATTTTAATATTTAG+AGG - Chr2:28174271-28174290 MsG0280008261.01.T01:intron 10.0%
!!! GAAAAATGAATAATTTTAAA+AGG + Chr2:28174833-28174852 None:intergenic 10.0%
!! AAATAGAAAGTTTATTAGAA+GGG + Chr2:28170717-28170736 None:intergenic 15.0%
!! AACATAAAATACACAAATTA+GGG - Chr2:28176303-28176322 MsG0280008261.01.T01:intron 15.0%
!! ATTATAACTATGAAAACAAA+GGG - Chr2:28177374-28177393 MsG0280008261.01.T01:five_prime_UTR 15.0%
!! ATTATTTCCATATTTAAAAG+AGG + Chr2:28173695-28173714 None:intergenic 15.0%
!! ATTTATTTATTTCATATCCA+TGG - Chr2:28170477-28170496 MsG0280008261.01.T01:CDS 15.0%
!! TAAATAGAAAGTTTATTAGA+AGG + Chr2:28170718-28170737 None:intergenic 15.0%
!! TAAATCATTATAAACATGTA+TGG + Chr2:28172117-28172136 None:intergenic 15.0%
!! TTAATTAACTCATAGATTAT+AGG - Chr2:28171072-28171091 MsG0280008261.01.T01:CDS 15.0%
!! TTCAAATTATTGAATTGTTA+TGG - Chr2:28170343-28170362 MsG0280008261.01.T01:CDS 15.0%
!!! AAAATTGTCATTTTCTAAAT+AGG - Chr2:28175871-28175890 MsG0280008261.01.T01:intron 15.0%
!!! AAATTGTCATTTTCTAAATA+GGG - Chr2:28175872-28175891 MsG0280008261.01.T01:intron 15.0%
!!! ATCATTTTATTTTATGTTAC+AGG - Chr2:28176916-28176935 MsG0280008261.01.T01:CDS 15.0%
!!! TAACATCATATTTTTTACAA+AGG + Chr2:28170816-28170835 None:intergenic 15.0%
!!! TAACTTCTTGTTATTAAAAA+TGG - Chr2:28174417-28174436 MsG0280008261.01.T01:CDS 15.0%
!!! TCAATAATATATGTGTATTT+TGG + Chr2:28174901-28174920 None:intergenic 15.0%
!!! TGAATAATTTTAAAAGGAAA+TGG + Chr2:28174827-28174846 None:intergenic 15.0%
!!! TTACATTTTTAGAAATGTTA+TGG - Chr2:28173570-28173589 MsG0280008261.01.T01:intron 15.0%
!! AAAAATATGATGTTAAGTCA+AGG - Chr2:28170821-28170840 MsG0280008261.01.T01:intron 20.0%
!! ATCTTCAAAAACAGATAATA+AGG + Chr2:28174931-28174950 None:intergenic 20.0%
!! ATTATAAACATGTATGGATT+TGG + Chr2:28172347-28172366 None:intergenic 20.0%
!! CAAAAAAATATCCAAAACTT+CGG - Chr2:28173284-28173303 MsG0280008261.01.T01:intron 20.0%
!! GAACATAAAATACACAAATT+AGG - Chr2:28176302-28176321 MsG0280008261.01.T01:intron 20.0%
!! GATTATAACTATGAAAACAA+AGG - Chr2:28177373-28177392 MsG0280008261.01.T01:five_prime_UTR 20.0%
!! GATTGAACTTAATATTTACA+TGG - Chr2:28174480-28174499 MsG0280008261.01.T01:intron 20.0%
!! TCTCAAAATGTATCATTATA+AGG - Chr2:28170950-28170969 MsG0280008261.01.T01:CDS 20.0%
!! TTAATAATATGGCAACAATT+GGG + Chr2:28174108-28174127 None:intergenic 20.0%
!! TTATAGAAGCAACAAAAAAA+TGG - Chr2:28177090-28177109 MsG0280008261.01.T01:CDS 20.0%
!! TTTCCTTATTAGTTATGTAA+TGG - Chr2:28177325-28177344 MsG0280008261.01.T01:five_prime_UTR 20.0%
!!! AAATGTTAATAAGTGTCATT+AGG + Chr2:28174653-28174672 None:intergenic 20.0%
!!! AACAAAAAATTGGTTTAGAT+AGG - Chr2:28174037-28174056 MsG0280008261.01.T01:intron 20.0%
!!! AAGACAAACTTAATTCTTTT+GGG + Chr2:28174545-28174564 None:intergenic 20.0%
!!! AAGCTTTATCTTTAAAATAC+AGG + Chr2:28175948-28175967 None:intergenic 20.0%
!!! AATGTTAATAAGTGTCATTA+GGG + Chr2:28174652-28174671 None:intergenic 20.0%
!!! AATTGTCATTTTCTAAATAG+GGG - Chr2:28175873-28175892 MsG0280008261.01.T01:intron 20.0%
!!! ACAAATACCATAATCTTTTA+GGG + Chr2:28174257-28174276 None:intergenic 20.0%
!!! ACCAATTTTTTGTTTTTGAA+TGG + Chr2:28174031-28174050 None:intergenic 20.0%
!!! ATAAGGAATATTTTGTTTGT+AGG + Chr2:28174864-28174883 None:intergenic 20.0%
!!! ATTAAGTTGTTTTTCTAAGT+AGG + Chr2:28171027-28171046 None:intergenic 20.0%
!!! CATTTTCTGAGTTAATAATA+TGG + Chr2:28174119-28174138 None:intergenic 20.0%
!!! CTTGTTATTAAAAATGGTAA+AGG - Chr2:28174423-28174442 MsG0280008261.01.T01:CDS 20.0%
!!! GAGATATTTTTTCATTTATG+TGG - Chr2:28170518-28170537 MsG0280008261.01.T01:CDS 20.0%
!!! TAATATAGACCTCTAAAAAA+TGG + Chr2:28174460-28174479 None:intergenic 20.0%
!!! TACAAATACCATAATCTTTT+AGG + Chr2:28174258-28174277 None:intergenic 20.0%
!!! TGGTCATTATTTTGATAATA+AGG + Chr2:28174881-28174900 None:intergenic 20.0%
!!! TTAAGTTGTTTTTCTAAGTA+GGG + Chr2:28171026-28171045 None:intergenic 20.0%
!!! TTATTTTATGTTACAGGTTA+CGG - Chr2:28176922-28176941 MsG0280008261.01.T01:CDS 20.0%
!!! TTCAATTTCTCCATTTTTAA+GGG + Chr2:28173858-28173877 None:intergenic 20.0%
!!! TTTCAATTTCTCCATTTTTA+AGG + Chr2:28173859-28173878 None:intergenic 20.0%
!!! TTTTCAATTTGCTAAAGTTT+GGG - Chr2:28170788-28170807 MsG0280008261.01.T01:intron 20.0%
!!! TTTTGCCATTTCTTTTAATA+GGG + Chr2:28175699-28175718 None:intergenic 20.0%
! AAAGCAGAGAAAAAAAACTT+AGG + Chr2:28170850-28170869 None:intergenic 25.0%
! AAATATAGTCCATTCACTTA+TGG - Chr2:28176668-28176687 MsG0280008261.01.T01:intron 25.0%
! AAGAAAGACATATAATAGTG+AGG - Chr2:28175340-28175359 MsG0280008261.01.T01:intron 25.0%
! AAGAAAGTAATGCAAATTCA+TGG + Chr2:28174215-28174234 None:intergenic 25.0%
! AAGCAACAAAAAAATGGTTT+GGG - Chr2:28177096-28177115 MsG0280008261.01.T01:CDS 25.0%
! AAGCTCATTATAAACATGTA+CGG + Chr2:28171962-28171981 None:intergenic 25.0%
! AAGCTCATTATAAACATGTA+TGG + Chr2:28171962-28171981 None:intergenic 25.0%
! AAGGTTAAACAATGAACAAT+AGG + Chr2:28176707-28176726 None:intergenic 25.0%
! AATCTACGATAAGAACATAA+GGG + Chr2:28175201-28175220 None:intergenic 25.0%
! AGAAGCTCATTATAAACATT+TGG + Chr2:28171791-28171810 None:intergenic 25.0%
! ATAAAGTCAGCAATAAATTG+AGG - Chr2:28173516-28173535 MsG0280008261.01.T01:intron 25.0%
! ATAAGTCAATTCAAACAGAA+CGG - Chr2:28176880-28176899 MsG0280008261.01.T01:CDS 25.0%
! ATATGGAATTTATAATGGCA+GGG - Chr2:28176099-28176118 MsG0280008261.01.T01:intron 25.0%
! ATATTTATGCTCAATAGTCT+GGG + Chr2:28171732-28171751 None:intergenic 25.0%
! ATCATATTTCCCTTATGTTA+GGG + Chr2:28175758-28175777 None:intergenic 25.0%
! ATGGAATTAAAAGCAAGAAA+GGG + Chr2:28172098-28172117 None:intergenic 25.0%
! ATTATAAACATGCATGGATT+TGG + Chr2:28172634-28172653 None:intergenic 25.0%
! ATTGTAAACACTATAAACCA+AGG + Chr2:28176950-28176969 None:intergenic 25.0%
! ATTTATCCATTTCTTACCTT+TGG + Chr2:28176824-28176843 None:intergenic 25.0%
! CATTCTTAACCAATAATCTT+AGG - Chr2:28175978-28175997 MsG0280008261.01.T01:intron 25.0%
! CTAAATATTGTTTGCTTCTT+TGG - Chr2:28177248-28177267 MsG0280008261.01.T01:five_prime_UTR 25.0%
! GATATCAATCAAGTTAATGA+TGG + Chr2:28176453-28176472 None:intergenic 25.0%
! GCCATTCAAAAACAAAAAAT+TGG - Chr2:28174027-28174046 MsG0280008261.01.T01:intron 25.0%
! GTAGGTAGATAAATTCAAAT+AGG - Chr2:28171261-28171280 MsG0280008261.01.T01:intron 25.0%
! GTTAATAATATGGCAACAAT+TGG + Chr2:28174109-28174128 None:intergenic 25.0%
! TAATGTTGTGAAACATTTGT+GGG + Chr2:28175318-28175337 None:intergenic 25.0%
! TATATGGAATTTATAATGGC+AGG - Chr2:28176098-28176117 MsG0280008261.01.T01:intron 25.0%
! TATGGAATTAAAAGCAAGAA+AGG + Chr2:28172099-28172118 None:intergenic 25.0%
! TATTTAGAGGTCATCTAATA+TGG - Chr2:28174284-28174303 MsG0280008261.01.T01:intron 25.0%
! TATTTATATTAGGCTTGATG+AGG - Chr2:28174677-28174696 MsG0280008261.01.T01:intron 25.0%
! TCATGTGTAAATAACATTTC+TGG - Chr2:28173726-28173745 MsG0280008261.01.T01:intron 25.0%
! TCTATTTATCTTTCTGATGA+TGG - Chr2:28170730-28170749 MsG0280008261.01.T01:CDS 25.0%
! TGTCTTAATGACATTGTTTA+AGG - Chr2:28174798-28174817 MsG0280008261.01.T01:intron 25.0%
! TTACCTTAAAACAAACACAT+AGG + Chr2:28173546-28173565 None:intergenic 25.0%
! TTAGAATTAATAATGTCCTC+AGG + Chr2:28175631-28175650 None:intergenic 25.0%
! TTATAATGAGCTTCTTAGTT+AGG - Chr2:28171796-28171815 MsG0280008261.01.T01:intron 25.0%
! TTTAATCCCAAAAGAGTAAT+AGG + Chr2:28170763-28170782 None:intergenic 25.0%
!! AAGTCATTATTTCTTTGTTG+AGG + Chr2:28174002-28174021 None:intergenic 25.0%
!! ATATTTATCATATTGGCTGA+CGG - Chr2:28176065-28176084 MsG0280008261.01.T01:intron 25.0%
!! ATCTAAAGAGCTTGAAATTT+TGG + Chr2:28175391-28175410 None:intergenic 25.0%
!! ATGTTTCAACTTGTTCATTA+GGG - Chr2:28174762-28174781 MsG0280008261.01.T01:intron 25.0%
!! CAAGACAAACTTAATTCTTT+TGG + Chr2:28174546-28174565 None:intergenic 25.0%
!! GAATTTTCTATTAGACAATG+TGG - Chr2:28175464-28175483 MsG0280008261.01.T01:intron 25.0%
!! GATTCATCCTCTTTTAAATA+TGG - Chr2:28173685-28173704 MsG0280008261.01.T01:intron 25.0%
!! GTAGTTATAATTTTTGCATG+CGG + Chr2:28174583-28174602 None:intergenic 25.0%
!! TCCTTAAACAATGTCTTTTA+GGG + Chr2:28174521-28174540 None:intergenic 25.0%
!! TCTATGTTTTGTACCTTTTT+GGG - Chr2:28173135-28173154 MsG0280008261.01.T01:intron 25.0%
!! TGATGATTTTACAATTTGAC+AGG - Chr2:28173244-28173263 MsG0280008261.01.T01:intron 25.0%
!! TTCCTTAAACAATGTCTTTT+AGG + Chr2:28174522-28174541 None:intergenic 25.0%
!! TTTTTGCATTTTCTCGTATT+TGG + Chr2:28173270-28173289 None:intergenic 25.0%
!!! AAGTTTTTTTTCTCTGCTTT+GGG - Chr2:28170850-28170869 MsG0280008261.01.T01:intron 25.0%
!!! ACTACCACACTTTTTAAATA+AGG + Chr2:28171301-28171320 None:intergenic 25.0%
!!! ATCGCAACATTTTAAAACAT+AGG + Chr2:28175669-28175688 None:intergenic 25.0%
!!! ATTGTCATTTTCTAAATAGG+GGG - Chr2:28175874-28175893 MsG0280008261.01.T01:intron 25.0%
!!! CTACCACACTTTTTAAATAA+GGG + Chr2:28171300-28171319 None:intergenic 25.0%
!!! CTTTTCAATTTGCTAAAGTT+TGG - Chr2:28170787-28170806 MsG0280008261.01.T01:intron 25.0%
!!! CTTTTGCCATTTCTTTTAAT+AGG + Chr2:28175700-28175719 None:intergenic 25.0%
!!! GTTTTAAAATGTTGCGATTT+TGG - Chr2:28175671-28175690 MsG0280008261.01.T01:intron 25.0%
!!! TAAGTTTTTTTTCTCTGCTT+TGG - Chr2:28170849-28170868 MsG0280008261.01.T01:intron 25.0%
!!! TATCCTATGTGTTTGTTTTA+AGG - Chr2:28173540-28173559 MsG0280008261.01.T01:intron 25.0%
!!! TATCTTAGACCATTTTTTAG+AGG - Chr2:28174448-28174467 MsG0280008261.01.T01:intron 25.0%
!!! TCGCAACATTTTAAAACATA+GGG + Chr2:28175668-28175687 None:intergenic 25.0%
!!! TTTGCCATTTCTTTTAATAG+GGG + Chr2:28175698-28175717 None:intergenic 25.0%
AAATATCGAAATTGTTAGGC+CGG + Chr2:28176367-28176386 None:intergenic 30.0%
AACAAACACACCCTTAAAAA+TGG - Chr2:28173845-28173864 MsG0280008261.01.T01:intron 30.0%
AAGCTCATTATAAACATGCA+TGG + Chr2:28172640-28172659 None:intergenic 30.0%
AAGGATTGCAATATGGAAAT+TGG - Chr2:28171616-28171635 MsG0280008261.01.T01:intron 30.0%
AATATTGTTTGCTTCTTTGG+TGG - Chr2:28177251-28177270 MsG0280008261.01.T01:five_prime_UTR 30.0%
AATCGAAACCAAGAAAAAAG+GGG + Chr2:28172464-28172483 None:intergenic 30.0%
AATGAGTGTCCTAAGATTAT+TGG + Chr2:28175990-28176009 None:intergenic 30.0%
AATGCGATTGTAACATCAAT+CGG - Chr2:28177053-28177072 MsG0280008261.01.T01:CDS 30.0%
AATGTTCCTCATAGATACAA+AGG - Chr2:28175009-28175028 MsG0280008261.01.T01:intron 30.0%
ACAAAGAAACAGTTCAATCA+TGG - Chr2:28170381-28170400 MsG0280008261.01.T01:CDS 30.0%
ACCAATAAAAAAAATTGGCC+GGG - Chr2:28171346-28171365 MsG0280008261.01.T01:intron 30.0%
AGTATGAGTAACACAATCAT+TGG + Chr2:28177230-28177249 None:intergenic 30.0%
ATAACTATGAAAACAAAGGG+TGG - Chr2:28177377-28177396 MsG0280008261.01.T01:five_prime_UTR 30.0%
ATCAAATGTGATTACAGCTT+AGG - Chr2:28175152-28175171 MsG0280008261.01.T01:intron 30.0%
ATGGAATCAAAACCAAGAAA+GGG + Chr2:28172393-28172412 None:intergenic 30.0%
ATGGAATCGAAACAAAGAAA+GGG + Chr2:28172039-28172058 None:intergenic 30.0%
CAAAAATACCATGTTTCTTG+GGG - Chr2:28176566-28176585 MsG0280008261.01.T01:intron 30.0%
CAAAACACTTACGAAACTAT+TGG + Chr2:28171242-28171261 None:intergenic 30.0%
CAATCTACGATAAGAACATA+AGG + Chr2:28175202-28175221 None:intergenic 30.0%
CACCAATAAAAAAAATTGGC+CGG - Chr2:28171345-28171364 MsG0280008261.01.T01:intron 30.0%
CATATTTATGCTCAATAGTC+TGG + Chr2:28171733-28171752 None:intergenic 30.0%
CCAAAAATACCATGTTTCTT+GGG - Chr2:28176565-28176584 MsG0280008261.01.T01:intron 30.0%
CTAATGTTGTGAAACATTTG+TGG + Chr2:28175319-28175338 None:intergenic 30.0%
GAAGCAACAAAAAAATGGTT+TGG - Chr2:28177095-28177114 MsG0280008261.01.T01:CDS 30.0%
GAATCGAAACCAAGAAAAAA+GGG + Chr2:28172465-28172484 None:intergenic 30.0%
GACAAAGACACAAAAATGAA+TGG + Chr2:28175419-28175438 None:intergenic 30.0%
GAGCCATTACATAACTAATA+AGG + Chr2:28177331-28177350 None:intergenic 30.0%
GAGCTCATTATAAACATGTA+TGG + Chr2:28172058-28172077 None:intergenic 30.0%
GATCATATTTCCCTTATGTT+AGG + Chr2:28175759-28175778 None:intergenic 30.0%
GATGAATCTAACATTCTCAT+GGG + Chr2:28173673-28173692 None:intergenic 30.0%
GCGTCACCAATAAAAAAAAT+TGG - Chr2:28171341-28171360 MsG0280008261.01.T01:intron 30.0%
GGCAAAATATCGAAATTGTT+AGG + Chr2:28176371-28176390 None:intergenic 30.0%
GGTGTATGGAATAACATATA+GGG + Chr2:28176750-28176769 None:intergenic 30.0%
GTATTTCCAAAGGTAAGAAA+TGG - Chr2:28176815-28176834 MsG0280008261.01.T01:CDS 30.0%
GTTAATTAGATTGATCATGC+TGG + Chr2:28171416-28171435 None:intergenic 30.0%
TAACAAACACGATCCAAAAA+GGG - Chr2:28173026-28173045 MsG0280008261.01.T01:intron 30.0%
TAACTATGAAAACAAAGGGT+GGG - Chr2:28177378-28177397 MsG0280008261.01.T01:five_prime_UTR 30.0%
TATCATCCAAACTTAAATCC+CGG + Chr2:28171367-28171386 None:intergenic 30.0%
TATGGAATCAAAACCAAGAA+AGG + Chr2:28172394-28172413 None:intergenic 30.0%
TATGGAATCGAAACAAAGAA+AGG + Chr2:28172040-28172059 None:intergenic 30.0%
TATGGAATTTATAATGGCAG+GGG - Chr2:28176100-28176119 MsG0280008261.01.T01:intron 30.0%
TCAAATGTGATTACAGCTTA+GGG - Chr2:28175153-28175172 MsG0280008261.01.T01:intron 30.0%
TCACCATACAAAGATTCTTT+GGG + Chr2:28173316-28173335 None:intergenic 30.0%
TCATATTTCCCTTATGTTAG+GGG + Chr2:28175757-28175776 None:intergenic 30.0%
TGACGGAGACAATATATATA+TGG - Chr2:28176082-28176101 MsG0280008261.01.T01:intron 30.0%
TGGAATTAAAAGCAAGAAAG+GGG + Chr2:28172097-28172116 None:intergenic 30.0%
TTAACAAACACGATCCAAAA+AGG - Chr2:28171851-28171870 MsG0280008261.01.T01:intron 30.0%
TTCTATTAGACAATGTGGAA+AGG - Chr2:28175469-28175488 MsG0280008261.01.T01:intron 30.0%
TTCTCAAAAAGTTGCGATTA+TGG - Chr2:28175794-28175813 MsG0280008261.01.T01:intron 30.0%
TTGTATCTATGAGGAACATT+TGG + Chr2:28175009-28175028 None:intergenic 30.0%
TTTAAACTAGCTCAAAGGAT+GGG + Chr2:28171765-28171784 None:intergenic 30.0%
TTTATCGAGGTAATTACAAC+TGG - Chr2:28176998-28177017 MsG0280008261.01.T01:CDS 30.0%
! AAAAAAGCACATGGATTGTT+TGG + Chr2:28175254-28175273 None:intergenic 30.0%
! AGATCCAAAAAACCTTTTCT+TGG - Chr2:28172224-28172243 MsG0280008261.01.T01:intron 30.0%
! ATGCCCTTATTTAAAAAGTG+TGG - Chr2:28171294-28171313 MsG0280008261.01.T01:intron 30.0%
! CATGTTTCAACTTGTTCATT+AGG - Chr2:28174761-28174780 MsG0280008261.01.T01:intron 30.0%
! CCAAGAAACATGGTATTTTT+GGG + Chr2:28176567-28176586 None:intergenic 30.0%
! CTAATGAACAAGTTGAAACA+TGG + Chr2:28174763-28174782 None:intergenic 30.0%
! GTCTATGTTTTGTACCTTTT+TGG - Chr2:28173134-28173153 MsG0280008261.01.T01:intron 30.0%
! TAGTTTCGTAAGTGTTTTGT+AGG - Chr2:28171243-28171262 MsG0280008261.01.T01:intron 30.0%
! TGATCATGCTGGTTATAAAA+GGG + Chr2:28171405-28171424 None:intergenic 30.0%
! TGTTATGAACACTGTTGTTT+CGG - Chr2:28170675-28170694 MsG0280008261.01.T01:intron 30.0%
! TTAACTTGATTGATATCCAC+AGG - Chr2:28176456-28176475 MsG0280008261.01.T01:intron 30.0%
! TTCTGTGTTGTGTTTTCATT+GGG - Chr2:28173180-28173199 MsG0280008261.01.T01:intron 30.0%
! TTGATCATGCTGGTTATAAA+AGG + Chr2:28171406-28171425 None:intergenic 30.0%
! TTTCTGTGTTGTGTTTTCAT+TGG - Chr2:28173179-28173198 MsG0280008261.01.T01:intron 30.0%
! TTTCTTACCTTTGGAAATAC+AGG + Chr2:28176815-28176834 None:intergenic 30.0%
! TTTTTGCTGCAAGTTAGAAA+TGG + Chr2:28174715-28174734 None:intergenic 30.0%
!! AACTTTTTGAGAAGATAAGG+GGG + Chr2:28175787-28175806 None:intergenic 30.0%
!! AATGAGTCAGTTGATAAAGT+GGG - Chr2:28176616-28176635 MsG0280008261.01.T01:intron 30.0%
!! AGGGATTTTGATGAAATGTT+TGG - Chr2:28177296-28177315 MsG0280008261.01.T01:five_prime_UTR 30.0%
!! ATTTATCTTTCTGATGATGG+AGG - Chr2:28170733-28170752 MsG0280008261.01.T01:CDS 30.0%
!! CAACTTTTTGAGAAGATAAG+GGG + Chr2:28175788-28175807 None:intergenic 30.0%
!! GCAACTTTTTGAGAAGATAA+GGG + Chr2:28175789-28175808 None:intergenic 30.0%
!! TGATGCTATTTGTACCTTTT+TGG + Chr2:28175580-28175599 None:intergenic 30.0%
!! TTGCCATTTCTTTTAATAGG+GGG + Chr2:28175697-28175716 None:intergenic 30.0%
!!! AATTCAAACCCCTTTTTTCT+TGG - Chr2:28172453-28172472 MsG0280008261.01.T01:intron 30.0%
!!! CGCAACATTTTAAAACATAG+GGG + Chr2:28175667-28175686 None:intergenic 30.0%
!!! CTATTTGTACCTTTTTGGTT+TGG + Chr2:28175575-28175594 None:intergenic 30.0%
!!! GAAACCAAGAAAAGGTTTTT+TGG + Chr2:28172231-28172250 None:intergenic 30.0%
!!! GCAACATTTTAAAACATAGG+GGG + Chr2:28175666-28175685 None:intergenic 30.0%
!!! TGGTATTTTTGGGTAAAGAT+AGG + Chr2:28176557-28176576 None:intergenic 30.0%
!!! TTACTCTTTTGGGATTAAAG+AGG - Chr2:28170764-28170783 MsG0280008261.01.T01:CDS 30.0%
!!! TTTTTTTTCCATGCTTGTTG+TGG + Chr2:28174192-28174211 None:intergenic 30.0%
AAAAGAAATATGAGCAGGGT+AGG - Chr2:28177171-28177190 MsG0280008261.01.T01:exon 35.0%
AAGGAATCGAAACCAAGAAA+GGG + Chr2:28172001-28172020 None:intergenic 35.0%
ACAATTCCATATAGGGTGTA+TGG + Chr2:28176764-28176783 None:intergenic 35.0%
ACGCAAAAGAAATATGAGCA+GGG - Chr2:28177167-28177186 MsG0280008261.01.T01:CDS 35.0%
ACGTGAATTTGAAGAAGAGA+GGG - Chr2:28170897-28170916 MsG0280008261.01.T01:CDS 35.0%
AGACATATAATAGTGAGGCT+AGG - Chr2:28175345-28175364 MsG0280008261.01.T01:intron 35.0%
AGAGCATATTCCCTAAACAT+GGG + Chr2:28175727-28175746 None:intergenic 35.0%
AGATGAAGGAGGAAAAAAGA+AGG + Chr2:28174142-28174161 None:intergenic 35.0%
AGGAATACCTGTATTTCCAA+AGG - Chr2:28176805-28176824 MsG0280008261.01.T01:CDS 35.0%
AGTTAGAAATGGTCCAAAGA+TGG + Chr2:28174704-28174723 None:intergenic 35.0%
AGTTATGACCGAGAATTTAC+CGG - Chr2:28170582-28170601 MsG0280008261.01.T01:intron 35.0%
ATATTTCCCTTATGTTAGGG+GGG + Chr2:28175755-28175774 None:intergenic 35.0%
ATCAAACTTCATCTTTGGTG+AGG + Chr2:28174738-28174757 None:intergenic 35.0%
ATGCGATTGTAACATCAATC+GGG - Chr2:28177054-28177073 MsG0280008261.01.T01:CDS 35.0%
ATGGAATCGAAACCAAGAAA+AGG + Chr2:28172239-28172258 None:intergenic 35.0%
ATGGAATCGAAACCAAGAAA+GGG + Chr2:28172239-28172258 None:intergenic 35.0%
ATTAGGGTAATGAGTAACCT+AGG - Chr2:28176319-28176338 MsG0280008261.01.T01:intron 35.0%
ATTATGTGAGTTCTGCTTAG+AGG + Chr2:28170410-28170429 None:intergenic 35.0%
ATTCCTTCTTTCACGTTAGT+TGG + Chr2:28176599-28176618 None:intergenic 35.0%
CAACCCAAAGAATCTTTGTA+TGG - Chr2:28173310-28173329 MsG0280008261.01.T01:intron 35.0%
CATATTTCCCTTATGTTAGG+GGG + Chr2:28175756-28175775 None:intergenic 35.0%
CCCAAAAATACCATGTTTCT+TGG - Chr2:28176564-28176583 MsG0280008261.01.T01:intron 35.0%
CCTATGAGAGAACACAAATT+GGG - Chr2:28176267-28176286 MsG0280008261.01.T01:intron 35.0%
CTAAGCTATCCTATTCTAGA+GGG - Chr2:28177350-28177369 MsG0280008261.01.T01:five_prime_UTR 35.0%
CTATGAGAGAACACAAATTG+GGG - Chr2:28176268-28176287 MsG0280008261.01.T01:intron 35.0%
CTGAGGAACAATTCCATATA+GGG + Chr2:28176771-28176790 None:intergenic 35.0%
CTTGAAAGTCCATAAGTGAA+TGG + Chr2:28176680-28176699 None:intergenic 35.0%
CTTGATGCTCAAAACAACTT+TGG - Chr2:28176131-28176150 MsG0280008261.01.T01:intron 35.0%
GAAACAAGACACATATGAAG+TGG + Chr2:28170436-28170455 None:intergenic 35.0%
GAAGATCATTAACGACCAAA+AGG - Chr2:28174945-28174964 MsG0280008261.01.T01:intron 35.0%
GAATCGAAACCAAGAAAAAG+GGG + Chr2:28172179-28172198 None:intergenic 35.0%
GAATTCTAACAAATGACCTG+AGG - Chr2:28175612-28175631 MsG0280008261.01.T01:intron 35.0%
GAGAAACCATGAAACATGTA+CGG + Chr2:28171935-28171954 None:intergenic 35.0%
GAGCTTCTTAGATCCAAAAA+GGG - Chr2:28171976-28171995 MsG0280008261.01.T01:intron 35.0%
GATAAAATGCTGAATCTGAC+TGG + Chr2:28176984-28177003 None:intergenic 35.0%
GCCCTAAAAGACATTGTTTA+AGG - Chr2:28174517-28174536 MsG0280008261.01.T01:intron 35.0%
GGAATCGAAACCAAGAAAAA+AGG + Chr2:28172180-28172199 None:intergenic 35.0%
GGAATCGAAACCAAGAAAAA+GGG + Chr2:28172180-28172199 None:intergenic 35.0%
GGAATTAAAAGCAAGAAAGG+GGG + Chr2:28172096-28172115 None:intergenic 35.0%
GGATGAATCTAACATTCTCA+TGG + Chr2:28173674-28173693 None:intergenic 35.0%
GGATGTTTAAACTAGCTCAA+AGG + Chr2:28171770-28171789 None:intergenic 35.0%
GGGTGTATGGAATAACATAT+AGG + Chr2:28176751-28176770 None:intergenic 35.0%
GTCACCATACAAAGATTCTT+TGG + Chr2:28173317-28173336 None:intergenic 35.0%
GTCATAACTGAACGACTTAT+CGG + Chr2:28170571-28170590 None:intergenic 35.0%
GTTATTCCATACACCCTATA+TGG - Chr2:28176755-28176774 MsG0280008261.01.T01:intron 35.0%
GTTTAAACTAGCTCAAAGGA+TGG + Chr2:28171766-28171785 None:intergenic 35.0%
TAAGCTTGACAAGTGACAAA+AGG + Chr2:28176726-28176745 None:intergenic 35.0%
TAAGGAATCGAAACCAAGAA+AGG + Chr2:28172002-28172021 None:intergenic 35.0%
TACGCAAAAGAAATATGAGC+AGG - Chr2:28177166-28177185 MsG0280008261.01.T01:CDS 35.0%
TAGATCCCTATCAATAGCTT+GGG - Chr2:28173960-28173979 MsG0280008261.01.T01:intron 35.0%
TATGGAATCGAAACCAAGAA+AGG + Chr2:28172240-28172259 None:intergenic 35.0%
TCCAAAAAAACCTCCTTTCT+TGG - Chr2:28172666-28172685 MsG0280008261.01.T01:intron 35.0%
TCCTATGAGAGAACACAAAT+TGG - Chr2:28176266-28176285 MsG0280008261.01.T01:intron 35.0%
TCTAAGCTATCCTATTCTAG+AGG - Chr2:28177349-28177368 MsG0280008261.01.T01:five_prime_UTR 35.0%
TCTGAGGAACAATTCCATAT+AGG + Chr2:28176772-28176791 None:intergenic 35.0%
TGAGCTTCTTAGATCCAAAA+AGG - Chr2:28171975-28171994 MsG0280008261.01.T01:intron 35.0%
TGGAATCAAAACCAAGAAAG+GGG + Chr2:28172392-28172411 None:intergenic 35.0%
TGGAATCGAAACAAAGAAAG+GGG + Chr2:28172038-28172057 None:intergenic 35.0%
TGGTCATCAAACTTCATCTT+TGG + Chr2:28174743-28174762 None:intergenic 35.0%
TGTGAAACATTTGTGGGAAT+TGG + Chr2:28175312-28175331 None:intergenic 35.0%
TGTTACCCAAGCTATTGATA+GGG + Chr2:28173968-28173987 None:intergenic 35.0%
TGTTTCTTTGTGAAGTGTGA+AGG + Chr2:28170372-28170391 None:intergenic 35.0%
TTAAACTAGCTCAAAGGATG+GGG + Chr2:28171764-28171783 None:intergenic 35.0%
TTAGACAATGTGGAAAGGAA+TGG - Chr2:28175474-28175493 MsG0280008261.01.T01:intron 35.0%
TTAGGGTAATGAGTAACCTA+GGG - Chr2:28176320-28176339 MsG0280008261.01.T01:intron 35.0%
TTATTTGTCCCACATTGCTT+AGG - Chr2:28171704-28171723 MsG0280008261.01.T01:intron 35.0%
TTATTTGTCTAGCATTGCTC+AGG - Chr2:28171481-28171500 MsG0280008261.01.T01:CDS 35.0%
TTTGGAAGTCCAAACCAAAA+AGG - Chr2:28175563-28175582 MsG0280008261.01.T01:intron 35.0%
TTTGGATCGTGGTTTAGAAA+GGG + Chr2:28171888-28171907 None:intergenic 35.0%
! AAGAGCATATTCCCTAAACA+TGG + Chr2:28175728-28175747 None:intergenic 35.0%
! AGACAGAAAGTGCACAAATA+TGG + Chr2:28173118-28173137 None:intergenic 35.0%
! AGGATCAAGAAAAAAGCACA+TGG + Chr2:28175263-28175282 None:intergenic 35.0%
! AGGTTCTCCTATTACTCTTT+TGG - Chr2:28170753-28170772 MsG0280008261.01.T01:CDS 35.0%
! AGTAGAAGTGCATTACTCTT+TGG - Chr2:28175545-28175564 MsG0280008261.01.T01:intron 35.0%
! CAATTCAAACCCCTTTTTCT+TGG - Chr2:28172167-28172186 MsG0280008261.01.T01:intron 35.0%
! CCCAAGAAACATGGTATTTT+TGG + Chr2:28176568-28176587 None:intergenic 35.0%
! GAAATAAATGTGACTTGTCG+TGG - Chr2:28173621-28173640 MsG0280008261.01.T01:intron 35.0%
! GCTTTGCAATCTCACATTTT+CGG - Chr2:28173801-28173820 MsG0280008261.01.T01:intron 35.0%
! GGTTCTCCTATTACTCTTTT+GGG - Chr2:28170754-28170773 MsG0280008261.01.T01:CDS 35.0%
! GTTTGAATTGTCACCCTTTT+TGG + Chr2:28172157-28172176 None:intergenic 35.0%
! TAAGCTATCCTATTCTAGAG+GGG - Chr2:28177351-28177370 MsG0280008261.01.T01:five_prime_UTR 35.0%
! TCAGATTCAGCATTTTATCG+AGG - Chr2:28176985-28177004 MsG0280008261.01.T01:CDS 35.0%
! TTTACAAGAAGCATGTGAAG+TGG - Chr2:28176235-28176254 MsG0280008261.01.T01:intron 35.0%
! TTTGCTTCTTTGGTGGTTTA+TGG - Chr2:28177258-28177277 MsG0280008261.01.T01:five_prime_UTR 35.0%
! TTTTGGATCGTGGTTTAGAA+AGG + Chr2:28171889-28171908 None:intergenic 35.0%
!! AAAATGGTTTGGGTTGAACA+AGG - Chr2:28177106-28177125 MsG0280008261.01.T01:CDS 35.0%
!! AAACTTGAGAGTACCATTAC+TGG - Chr2:28176499-28176518 MsG0280008261.01.T01:intron 35.0%
!! CGCAACTTTTTGAGAAGATA+AGG + Chr2:28175790-28175809 None:intergenic 35.0%
!! GAATGAGTCAGTTGATAAAG+TGG - Chr2:28176615-28176634 MsG0280008261.01.T01:intron 35.0%
!! GTTATAATCCCCTCTAGAAT+AGG + Chr2:28177362-28177381 None:intergenic 35.0%
!!! AAACCAAGAAAGGGGTTTTT+TGG + Chr2:28171992-28172011 None:intergenic 35.0%
!!! ACCAAGAAAGGAGGTTTTTT+TGG + Chr2:28172670-28172689 None:intergenic 35.0%
!!! ATCGCAACATTTTGAAACTG+AGG - Chr2:28175902-28175921 MsG0280008261.01.T01:intron 35.0%
!!! TCCCGGCCAATTTTTTTTAT+TGG + Chr2:28171350-28171369 None:intergenic 35.0%
!!! TCGCAACATTTTGAAACTGA+GGG - Chr2:28175903-28175922 MsG0280008261.01.T01:intron 35.0%
AATCGAGAAACTACGAAAGG+GGG + Chr2:28171912-28171931 None:intergenic 40.0%
AATTCCTCACACCATTGTGT+CGG - Chr2:28174077-28174096 MsG0280008261.01.T01:intron 40.0%
ACAACCTGATCATCCCAAAA+AGG + Chr2:28173151-28173170 None:intergenic 40.0%
ACAATGTGGAAAGGAATGGA+TGG - Chr2:28175478-28175497 MsG0280008261.01.T01:intron 40.0%
ACTTAACATGGTATCAGAGC+CGG - Chr2:28171590-28171609 MsG0280008261.01.T01:intron 40.0%
AGAAGAGAGGGACCAAATTA+AGG - Chr2:28170909-28170928 MsG0280008261.01.T01:CDS 40.0%
AGATCCAAGCCTACTTAACA+TGG - Chr2:28171578-28171597 MsG0280008261.01.T01:CDS 40.0%
AGGAATCGAAACCAAGAAAG+GGG + Chr2:28172000-28172019 None:intergenic 40.0%
AGGTCATCTAATATGGACTC+TGG - Chr2:28174291-28174310 MsG0280008261.01.T01:intron 40.0%
ATCAGGGCCCTAAAAGATTA+TGG - Chr2:28174247-28174266 MsG0280008261.01.T01:intron 40.0%
ATCCAAAAAACCCCCTTTCT+TGG - Chr2:28172283-28172302 MsG0280008261.01.T01:intron 40.0%
ATCGAGGTAATTACAACTGG+TGG - Chr2:28177001-28177020 MsG0280008261.01.T01:CDS 40.0%
ATCTCCAACCTCTACAATGA+AGG + Chr2:28176531-28176550 None:intergenic 40.0%
ATCTCCTTCATTGTAGAGGT+TGG - Chr2:28176524-28176543 MsG0280008261.01.T01:intron 40.0%
ATGAAGGAGATAGCCAGTAA+TGG + Chr2:28176515-28176534 None:intergenic 40.0%
ATGGAGACTACTCAATGTGA+GGG - Chr2:28177277-28177296 MsG0280008261.01.T01:five_prime_UTR 40.0%
ATTAGTCAGTTAAGCCGTGT+GGG + Chr2:28173365-28173384 None:intergenic 40.0%
CAAAAGTGACCCCATGTTTA+GGG - Chr2:28175714-28175733 MsG0280008261.01.T01:intron 40.0%
CAAGCTATTGATAGGGATCT+AGG + Chr2:28173961-28173980 None:intergenic 40.0%
CAATGTGGAAAGGAATGGAT+GGG - Chr2:28175479-28175498 MsG0280008261.01.T01:intron 40.0%
CACGTGAATTTGAAGAAGAG+AGG - Chr2:28170896-28170915 MsG0280008261.01.T01:intron 40.0%
CCATATTGCAATCCTTAACC+CGG + Chr2:28171612-28171631 None:intergenic 40.0%
CCCAATTTGTGTTCTCTCAT+AGG + Chr2:28176270-28176289 None:intergenic 40.0%
CCTTCATCTCTTACATCCAA+CGG - Chr2:28174153-28174172 MsG0280008261.01.T01:intron 40.0%
CCTTTCAAGAAGCAAATCTG+AGG + Chr2:28176788-28176807 None:intergenic 40.0%
CGAGAAACATAAACAACCAG+TGG + Chr2:28174976-28174995 None:intergenic 40.0%
CGGAATCGAAACCAAGAAAA+AGG + Chr2:28172181-28172200 None:intergenic 40.0%
CTAGATCCCTATCAATAGCT+TGG - Chr2:28173959-28173978 MsG0280008261.01.T01:intron 40.0%
CTTGATTGATATCCACAGGT+AGG - Chr2:28176460-28176479 MsG0280008261.01.T01:intron 40.0%
GAACACAAATTGGGGTAATG+AGG - Chr2:28176276-28176295 MsG0280008261.01.T01:intron 40.0%
GAATCACTGAAAGCAATACG+TGG - Chr2:28176173-28176192 MsG0280008261.01.T01:intron 40.0%
GAATCGAAACAAAGAAAGGG+GGG + Chr2:28172036-28172055 None:intergenic 40.0%
GAATCGAGAAACTACGAAAG+GGG + Chr2:28171913-28171932 None:intergenic 40.0%
GAGCATATTCCCTAAACATG+GGG + Chr2:28175726-28175745 None:intergenic 40.0%
GATACCATGTTAAGTAGGCT+TGG + Chr2:28171585-28171604 None:intergenic 40.0%
GATCCAAAAAACCCCTTTCT+TGG - Chr2:28171986-28172005 MsG0280008261.01.T01:intron 40.0%
GCAAGATCTTGAGAGATTTG+AGG + Chr2:28175283-28175302 None:intergenic 40.0%
GCTCTGATACCATGTTAAGT+AGG + Chr2:28171590-28171609 None:intergenic 40.0%
GGAATCAAAACCAAGAAAGG+AGG + Chr2:28172391-28172410 None:intergenic 40.0%
GGAATCAAAACCAAGAAAGG+GGG + Chr2:28172391-28172410 None:intergenic 40.0%
GGAATCGAAACAAAGAAAGG+GGG + Chr2:28172037-28172056 None:intergenic 40.0%
GGAATCGAGAAACTACGAAA+GGG + Chr2:28171914-28171933 None:intergenic 40.0%
GGTCATCTAATATGGACTCT+GGG - Chr2:28174292-28174311 MsG0280008261.01.T01:intron 40.0%
GTGTTACCCAAGCTATTGAT+AGG + Chr2:28173969-28173988 None:intergenic 40.0%
GTGTTCATAACATCGATCGT+TGG + Chr2:28170667-28170686 None:intergenic 40.0%
GTTCCTCATAGATACAAAGG+AGG - Chr2:28175012-28175031 MsG0280008261.01.T01:intron 40.0%
TACGGAATCGAAACCAAGAA+GGG + Chr2:28172183-28172202 None:intergenic 40.0%
TAGGTGCTTGCTTAACAGTT+AGG - Chr2:28171815-28171834 MsG0280008261.01.T01:intron 40.0%
TATGGAGACTACTCAATGTG+AGG - Chr2:28177276-28177295 MsG0280008261.01.T01:five_prime_UTR 40.0%
TCGATTCCGTACATGTTTCA+TGG - Chr2:28171926-28171945 MsG0280008261.01.T01:intron 40.0%
TCTATGTCAACAAGAGTCTC+TGG + Chr2:28173899-28173918 None:intergenic 40.0%
TCTTTGAGCCATCTTGATCA+GGG - Chr2:28174231-28174250 MsG0280008261.01.T01:intron 40.0%
TGATAGACATTCTCGGATTG+AGG - Chr2:28173337-28173356 MsG0280008261.01.T01:intron 40.0%
TGGAATCGAAACCAAGAAAG+GGG + Chr2:28172297-28172316 None:intergenic 40.0%
TGGCCCCCTATTAAAAGAAA+TGG - Chr2:28175691-28175710 MsG0280008261.01.T01:intron 40.0%
TGGTGACTGATAGACATTCT+CGG - Chr2:28173330-28173349 MsG0280008261.01.T01:intron 40.0%
TTCTTTGAGCCATCTTGATC+AGG - Chr2:28174230-28174249 MsG0280008261.01.T01:intron 40.0%
TTGGATCGTGGTTTAGAAAG+GGG + Chr2:28171887-28171906 None:intergenic 40.0%
TTGGATGTAAGAGATGAAGG+AGG + Chr2:28174153-28174172 None:intergenic 40.0%
TTTGTGTGTACGATTGATCC+TGG - Chr2:28170634-28170653 MsG0280008261.01.T01:intron 40.0%
! AAACCAAGAAAGGGGGTTTT+TGG + Chr2:28172289-28172308 None:intergenic 40.0%
! AATTGGCCGGGATTTAAGTT+TGG - Chr2:28171358-28171377 MsG0280008261.01.T01:intron 40.0%
! CAGGGTAGGTTTAATTTCGA+TGG - Chr2:28177185-28177204 MsG0280008261.01.T01:exon 40.0%
! CCTCAGATTTGCTTCTTGAA+AGG - Chr2:28176785-28176804 MsG0280008261.01.T01:intron 40.0%
! GATATTTTGCCAGTTGAGCT+AGG - Chr2:28176380-28176399 MsG0280008261.01.T01:intron 40.0%
! GATTACAGCTTAGGGTATCA+GGG - Chr2:28175161-28175180 MsG0280008261.01.T01:intron 40.0%
! GCTAGTGTCATTAGAAACCA+TGG + Chr2:28170497-28170516 None:intergenic 40.0%
! GGTGTCTTCTCAGCAATTTT+GGG - Chr2:28175836-28175855 MsG0280008261.01.T01:intron 40.0%
! TGAGGCTAGGAATGCTTTTA+CGG - Chr2:28175358-28175377 MsG0280008261.01.T01:intron 40.0%
! TGATTACAGCTTAGGGTATC+AGG - Chr2:28175160-28175179 MsG0280008261.01.T01:intron 40.0%
! TGGTGTCTTCTCAGCAATTT+TGG - Chr2:28175835-28175854 MsG0280008261.01.T01:intron 40.0%
! TGTTGTGTTTTCATTGGGTC+AGG - Chr2:28173185-28173204 MsG0280008261.01.T01:intron 40.0%
! TTAAGGGTGTGTTTGTTTCG+AGG + Chr2:28173842-28173861 None:intergenic 40.0%
! TTTTGACCCCCCTAACATAA+GGG - Chr2:28175746-28175765 MsG0280008261.01.T01:intron 40.0%
!! AATCCTTTGAGCTAGCTTTG+AGG - Chr2:28171552-28171571 MsG0280008261.01.T01:CDS 40.0%
!! GAATGGATGGGTTAGTTAAG+AGG - Chr2:28175491-28175510 MsG0280008261.01.T01:intron 40.0%
!! TGTTGTTTCGGCTATTGCAA+TGG - Chr2:28170687-28170706 MsG0280008261.01.T01:intron 40.0%
!!! AACCAAGAAAGGGGGTTTTT+TGG + Chr2:28172288-28172307 None:intergenic 40.0%
!!! ACAAAGAAAGGGGGGTTTTT+TGG + Chr2:28172028-28172047 None:intergenic 40.0%
!!! AGCAAGAAAGGGGGTTTTTT+TGG + Chr2:28172087-28172106 None:intergenic 40.0%
!!! CGCAACATTTTGAAACTGAG+GGG - Chr2:28175904-28175923 MsG0280008261.01.T01:intron 40.0%
!!! GCAACATTTTGAAACTGAGG+GGG - Chr2:28175905-28175924 MsG0280008261.01.T01:intron 40.0%
!!! TCAGCAATTTTGGGACGAAA+GGG - Chr2:28175845-28175864 MsG0280008261.01.T01:intron 40.0%
!!! TGTACCTTTTTGGGATGATC+AGG - Chr2:28173144-28173163 MsG0280008261.01.T01:intron 40.0%
!!! TTTTTTCTCTGCTTTGGGTG+AGG - Chr2:28170855-28170874 MsG0280008261.01.T01:intron 40.0%
ACAATTCAAACCCCCCTTCT+TGG - Chr2:28173051-28173070 MsG0280008261.01.T01:intron 45.0%
ACGGAATCGAAACCAAGAAG+GGG + Chr2:28173066-28173085 None:intergenic 45.0%
ATGCTCAACCACAACAAGCA+TGG - Chr2:28174181-28174200 MsG0280008261.01.T01:intron 45.0%
CAATATGGAAATTGGACCCC+AGG - Chr2:28171624-28171643 MsG0280008261.01.T01:intron 45.0%
CAATCTAGTGAGCCAGTGTA+CGG + Chr2:28173085-28173104 None:intergenic 45.0%
CACACAAATATGTCGAGTCC+CGG + Chr2:28170622-28170641 None:intergenic 45.0%
CATCCTCAAAGCTAGCTCAA+AGG + Chr2:28171558-28171577 None:intergenic 45.0%
CCGGGTTAAGGATTGCAATA+TGG - Chr2:28171609-28171628 MsG0280008261.01.T01:intron 45.0%
CCGTTGGATGTAAGAGATGA+AGG + Chr2:28174156-28174175 None:intergenic 45.0%
CGGAATCGAGAAACTACGAA+AGG + Chr2:28171915-28171934 None:intergenic 45.0%
CTAGCATTGCTCAGGTTCTT+GGG - Chr2:28171489-28171508 MsG0280008261.01.T01:CDS 45.0%
CTCATAAGTCCTAGCTCAAC+TGG + Chr2:28176392-28176411 None:intergenic 45.0%
CTTAACATGGTATCAGAGCC+GGG - Chr2:28171591-28171610 MsG0280008261.01.T01:intron 45.0%
GATCCAAAAACCCCCTTTCT+TGG - Chr2:28172570-28172589 MsG0280008261.01.T01:intron 45.0%
GCAAAAGTGACCCCATGTTT+AGG - Chr2:28175713-28175732 MsG0280008261.01.T01:intron 45.0%
GCATAAGAGAATCCTACCTG+TGG + Chr2:28176475-28176494 None:intergenic 45.0%
GCTCAAAGGATTGAGCTCAA+AGG + Chr2:28171544-28171563 None:intergenic 45.0%
GCTCCAACTAACGTGAAAGA+AGG - Chr2:28176593-28176612 MsG0280008261.01.T01:intron 45.0%
GCTCCTCCTTTGTATCTATG+AGG + Chr2:28175018-28175037 None:intergenic 45.0%
GGAATCGAAACCAAGAAAGG+GGG + Chr2:28171999-28172018 None:intergenic 45.0%
GGCTATCTCCTTCATTGTAG+AGG - Chr2:28176520-28176539 MsG0280008261.01.T01:intron 45.0%
GTACGGAATCGAAACCAAGA+AGG + Chr2:28172184-28172203 None:intergenic 45.0%
GTATCAGGGCTAATCAGCAA+TGG - Chr2:28175175-28175194 MsG0280008261.01.T01:intron 45.0%
TCTAGCATTGCTCAGGTTCT+TGG - Chr2:28171488-28171507 MsG0280008261.01.T01:CDS 45.0%
TCTGGGAACCTAAGCAATGT+GGG + Chr2:28171715-28171734 None:intergenic 45.0%
TGGATCGTGGTTTAGAAAGG+GGG + Chr2:28171886-28171905 None:intergenic 45.0%
TGGTTGAGCATCAAAACCGT+TGG + Chr2:28174172-28174191 None:intergenic 45.0%
TTGGTTTCGATTCCGTACAC+TGG - Chr2:28173070-28173089 MsG0280008261.01.T01:intron 45.0%
! CAACCAGTGGCATTTCCTTT+TGG + Chr2:28174963-28174982 None:intergenic 45.0%
! CTAGGACTTGCTCAAAGAAG+AGG + Chr2:28173943-28173962 None:intergenic 45.0%
! CTTTTGACCCCCCTAACATA+AGG - Chr2:28175745-28175764 MsG0280008261.01.T01:intron 45.0%
! GAAACTACGAAAGGGGGTTT+TGG + Chr2:28171906-28171925 None:intergenic 45.0%
! GACTTGCTCAAAGAAGAGGT+GGG + Chr2:28173939-28173958 None:intergenic 45.0%
! GATTAGTCAGTTAAGCCGTG+TGG + Chr2:28173366-28173385 None:intergenic 45.0%
!! ATGGGTTAGTTAAGAGGTCC+AGG - Chr2:28175497-28175516 MsG0280008261.01.T01:intron 45.0%
!! TTGGGTTGCTTCCGAAGTTT+TGG + Chr2:28173298-28173317 None:intergenic 45.0%
!!! AGGGGGGTTTTTTGGATCTA+AGG + Chr2:28172020-28172039 None:intergenic 45.0%
!!! CAGCAATTTTGGGACGAAAG+GGG - Chr2:28175846-28175865 MsG0280008261.01.T01:intron 45.0%
!!! CTCAGCAATTTTGGGACGAA+AGG - Chr2:28175844-28175863 MsG0280008261.01.T01:intron 45.0%
!!! TCGATCGTTGGTTCTTTTCC+AGG + Chr2:28170655-28170674 None:intergenic 45.0%
!!! TTTTAGGGCCCTGATCAAGA+TGG + Chr2:28174242-28174261 None:intergenic 45.0%
AACTGGTGGCTCATCGACAT+TGG - Chr2:28177015-28177034 MsG0280008261.01.T01:CDS 50.0%
ACACCACGTGTCCCAAAACA+GGG + Chr2:28175821-28175840 None:intergenic 50.0%
AGGAGGAGCTCTCAATACAC+TGG - Chr2:28175029-28175048 MsG0280008261.01.T01:intron 50.0%
ATGGTATCAGAGCCGGGTTA+AGG - Chr2:28171597-28171616 MsG0280008261.01.T01:intron 50.0%
ATTGGGACCATCCGACACAA+TGG + Chr2:28174091-28174110 None:intergenic 50.0%
CGACCAAAAGGAAATGCCAC+TGG - Chr2:28174957-28174976 MsG0280008261.01.T01:intron 50.0%
CGGAATCGAAACCAAGAAGG+GGG + Chr2:28173065-28173084 None:intergenic 50.0%
CGTGGTTTAGAAAGGGGGTT+TGG + Chr2:28171881-28171900 None:intergenic 50.0%
CTCGTCAGCCGGTAAATTCT+CGG + Chr2:28170593-28170612 None:intergenic 50.0%
GAGCACATCCCCAAGAAACA+TGG + Chr2:28176577-28176596 None:intergenic 50.0%
GGAATCGAAACCAAGAAGGG+GGG + Chr2:28173064-28173083 None:intergenic 50.0%
GGCTCACTAGATTGTGCTTG+TGG - Chr2:28173091-28173110 MsG0280008261.01.T01:intron 50.0%
GGCTTGATGAGGTCCATCTT+TGG - Chr2:28174688-28174707 MsG0280008261.01.T01:intron 50.0%
GTAACCTAGGGTTCGAACTC+CGG - Chr2:28176332-28176351 MsG0280008261.01.T01:intron 50.0%
GTCTGGGAACCTAAGCAATG+TGG + Chr2:28171716-28171735 None:intergenic 50.0%
TAGAAAGGGGGTTTGGATCG+TGG + Chr2:28171874-28171893 None:intergenic 50.0%
TGTTACAGGTTACGGAGCCT+TGG - Chr2:28176930-28176949 MsG0280008261.01.T01:CDS 50.0%
TTAAGAGGTCCAGGTCTCAC+TGG - Chr2:28175506-28175525 MsG0280008261.01.T01:intron 50.0%
TTTCCAACCAAGCGTTCCGT+TGG - Chr2:28170542-28170561 MsG0280008261.01.T01:CDS 50.0%
! GCGATTATGGCCCCTGTTTT+GGG - Chr2:28175807-28175826 MsG0280008261.01.T01:intron 50.0%
! GGACTTGCTCAAAGAAGAGG+TGG + Chr2:28173940-28173959 None:intergenic 50.0%
! TGCGATTATGGCCCCTGTTT+TGG - Chr2:28175806-28175825 MsG0280008261.01.T01:intron 50.0%
AACGACTTATCGGCCGCCAA+CGG + Chr2:28170561-28170580 None:intergenic 55.0%
ACCGGCTGACGAGAAGTTAC+CGG - Chr2:28170600-28170619 MsG0280008261.01.T01:intron 55.0%
ATGACCGGAGTTCGAACCCT+AGG + Chr2:28176339-28176358 None:intergenic 55.0%
CACCACGTGTCCCAAAACAG+GGG + Chr2:28175820-28175839 None:intergenic 55.0%
CCATCCGACACAATGGTGTG+AGG + Chr2:28174084-28174103 None:intergenic 55.0%
CCTCACACCATTGTGTCGGA+TGG - Chr2:28174081-28174100 MsG0280008261.01.T01:intron 55.0%
GACACCACGTGTCCCAAAAC+AGG + Chr2:28175822-28175841 None:intergenic 55.0%
TGGTGGCTCATCGACATTGG+TGG - Chr2:28177018-28177037 MsG0280008261.01.T01:CDS 55.0%
TTTCCACTGCCAGTGAGACC+TGG + Chr2:28175518-28175537 None:intergenic 55.0%
! CTCGGATTGAGGTACCCACA+CGG - Chr2:28173348-28173367 MsG0280008261.01.T01:intron 55.0%
! GGGGGTTTGGATCGTGGTTT+TGG + Chr2:28171868-28171887 None:intergenic 55.0%
!!! CGAAAGGGGGTTTTGGATCG+TGG + Chr2:28171899-28171918 None:intergenic 55.0%
CAGGTCCACGCTAGGCGTAA+GGG - Chr2:28171643-28171662 MsG0280008261.01.T01:intron 60.0%
CCAACCAAGCGTTCCGTTGG+CGG - Chr2:28170545-28170564 MsG0280008261.01.T01:CDS 60.0%
CCCGGTAACTTCTCGTCAGC+CGG + Chr2:28170604-28170623 None:intergenic 60.0%
CCGGCTGACGAGAAGTTACC+GGG - Chr2:28170601-28170620 MsG0280008261.01.T01:intron 60.0%
CGAACTCCGGTCATGACGTC+CGG - Chr2:28176345-28176364 MsG0280008261.01.T01:intron 60.0%
CGATGGTGCAGCGTTGCTCA+TGG - Chr2:28177202-28177221 MsG0280008261.01.T01:five_prime_UTR 60.0%
CTTACGCCTAGCGTGGACCT+GGG + Chr2:28171644-28171663 None:intergenic 60.0%
GTTAGGCCGGACGTCATGAC+CGG + Chr2:28176354-28176373 None:intergenic 60.0%
TCCACGCTAGGCGTAAGGGT+GGG - Chr2:28171647-28171666 MsG0280008261.01.T01:intron 60.0%
TTACGCCTAGCGTGGACCTG+GGG + Chr2:28171643-28171662 None:intergenic 60.0%
ACCCACCCTTACGCCTAGCG+TGG + Chr2:28171651-28171670 None:intergenic 65.0%
CCAGGTCCACGCTAGGCGTA+AGG - Chr2:28171642-28171661 MsG0280008261.01.T01:intron 65.0%
CCGCCAACGGAACGCTTGGT+TGG + Chr2:28170548-28170567 None:intergenic 65.0%
CCTTACGCCTAGCGTGGACC+TGG + Chr2:28171645-28171664 None:intergenic 65.0%
GGTCCAGGTCTCACTGGCAG+TGG - Chr2:28175512-28175531 MsG0280008261.01.T01:intron 65.0%
GTCCACGCTAGGCGTAAGGG+TGG - Chr2:28171646-28171665 MsG0280008261.01.T01:intron 65.0%
TTGGACCCCAGGTCCACGCT+AGG - Chr2:28171635-28171654 MsG0280008261.01.T01:intron 65.0%
!!! GGCCCCTGTTTTGGGACACG+TGG - Chr2:28175815-28175834 MsG0280008261.01.T01:intron 65.0%
TCGGCCGCCAACGGAACGCT+TGG + Chr2:28170552-28170571 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 28170320 28177403 28170320 ID=MsG0280008261.01;Name=MsG0280008261.01
Chr2 mRNA 28170320 28177403 28170320 ID=MsG0280008261.01.T01;Parent=MsG0280008261.01;Name=MsG0280008261.01.T01;_AED=0.45;_eAED=0.45;_QI=215|0.33|0.28|1|1|1|7|0|450
Chr2 exon 28170320 28170595 28170320 ID=MsG0280008261.01.T01:exon:35153;Parent=MsG0280008261.01.T01
Chr2 exon 28170717 28170785 28170717 ID=MsG0280008261.01.T01:exon:35152;Parent=MsG0280008261.01.T01
Chr2 exon 28170897 28171181 28170897 ID=MsG0280008261.01.T01:exon:35151;Parent=MsG0280008261.01.T01
Chr2 exon 28171434 28171603 28171434 ID=MsG0280008261.01.T01:exon:35150;Parent=MsG0280008261.01.T01
Chr2 exon 28172491 28172554 28172491 ID=MsG0280008261.01.T01:exon:35149;Parent=MsG0280008261.01.T01
Chr2 exon 28174365 28174457 28174365 ID=MsG0280008261.01.T01:exon:35148;Parent=MsG0280008261.01.T01
Chr2 exon 28176793 28177403 28176793 ID=MsG0280008261.01.T01:exon:35147;Parent=MsG0280008261.01.T01
Chr2 five_prime_UTR 28177189 28177403 28177189 ID=MsG0280008261.01.T01:five_prime_utr;Parent=MsG0280008261.01.T01
Chr2 CDS 28176793 28177188 28176793 ID=MsG0280008261.01.T01:cds;Parent=MsG0280008261.01.T01
Chr2 CDS 28174365 28174457 28174365 ID=MsG0280008261.01.T01:cds;Parent=MsG0280008261.01.T01
Chr2 CDS 28172491 28172554 28172491 ID=MsG0280008261.01.T01:cds;Parent=MsG0280008261.01.T01
Chr2 CDS 28171434 28171603 28171434 ID=MsG0280008261.01.T01:cds;Parent=MsG0280008261.01.T01
Chr2 CDS 28170897 28171181 28170897 ID=MsG0280008261.01.T01:cds;Parent=MsG0280008261.01.T01
Chr2 CDS 28170717 28170785 28170717 ID=MsG0280008261.01.T01:cds;Parent=MsG0280008261.01.T01
Chr2 CDS 28170320 28170595 28170320 ID=MsG0280008261.01.T01:cds;Parent=MsG0280008261.01.T01
Gene Sequence

>MsG0280008261.01.T01

ATGTGGTTTTCCAACCAAGCGTTCCGTTGGCGGCCGATAAGTCGTTCAGTTATGACCGAGAATTTACCGGCTGACGAGAAGTTACCGGGACTCGACATATTTGTGTGTACGATTGATCCTGGAAAAGAACCAACGATCGATGTTATGAACACTGTTGTTTCGGCTATTGCAATGGATTACCCTTCTAATAAACTTTCTATTTATCTTTCTGATGATGGAGGTTCTCCTATTACTCTTTTGGGATTAAAGAGGCTTTTCAATTTGCTAAAGTTTGGGTTCCTTTGTAAAAAATATGATGTTAAGTCAAGGTGTCCTAAGTTTTTTTTCTCTGCTTTGGGTGAGGATGAACAACTTCTTCGAACACGTGAATTTGAAGAAGAGAGGGACCAAATTAAGGCCAAATACGAGAAAATGCAAAAAAATATCCAAAACTTCGGAAGCAACCCAAAGAATCTTTGTATGGTGACTGATAGACATTCTCGGATTGAGCTTAGGGTATCAGGGCTAATCAGCAATGGCCCTTATGTTCTTATCGTAGATTGTGATATGAATTGGGACTATCTACTTGATGCTCAAAACAACTTTGGCAAGTCTACTATGTATGTAGAATCACTGAAAGCAATACGTGGTCAACAAACTACTAAGAAGAATATTTCAAGAGATGTAATTTTACAAGAAGCATGTGAAGTGGCTTCTTGTTCCTATGAGAGAACACAAATTGGGGTTGGAGATCAACCTATCTTTACCCAAAAATACCATGTTTCTTGGGGATGTGCTCCAACTAACGTGAAAGAAGGAATGAGTCAGTTGATAAAGTGGGTATCTGAACTTTCGTTGTTTGCAATATCTAAATATAGTCCATTCACTTATGGACTTTCAAGATTGCCTATTGTTCATTGTTTAACCTTTTGTCACTTGTCAAGCTTAGCCCTATATGTTATTCCATACACCCTATATGGAATTGTTCCTCAGATTTGCTTCTTGAAAGGAATACCTGTATTTCCAAAGGTTACGGAGCCTTGGTTTATAGTGTTTACAATATTGTTTGTATCCAGTCAGATTCAGCATTTTATCGAGGCAAAATTCACTTTATCAGACAAAGCAATTGACAAAGATACGCAAAAGAAATATGAGCAGGGTAGGTTTAATTTCGATGGTGCAGCGTTGCTCATGGCACCAATGATTGTGTTACTCATACTAAATATTGTTTGCTTCTTTGGTGGTTTATGGAGACTACTCAATGTGAGGGATTTTGATGAAATGTTTGGTCAAGTTTTCCTTATTAGTTATGTAATGGCTCTAAGCTATCCTATTCTAGAGGGGATTATAACTATGAAAACAAAGGGTGGGTAG
Protein sequence

>MsG0280008261.01.T01

MWFSNQAFRWRPISRSVMTENLPADEKLPGLDIFVCTIDPGKEPTIDVMNTVVSAIAMDYPSNKLSIYLSDDGGSPITLLGLKRLFNLLKFGFLCKKYDVKSRCPKFFFSALGEDEQLLRTREFEEERDQIKAKYEKMQKNIQNFGSNPKNLCMVTDRHSRIELRVSGLISNGPYVLIVDCDMNWDYLLDAQNNFGKSTMYVESLKAIRGQQTTKKNISRDVILQEACEVASCSYERTQIGVGDQPIFTQKYHVSWGCAPTNVKEGMSQLIKWVSELSLFAISKYSPFTYGLSRLPIVHCLTFCHLSSLALYVIPYTLYGIVPQICFLKGIPVFPKVTEPWFIVFTILFVSSQIQHFIEAKFTLSDKAIDKDTQKKYEQGRFNFDGAALLMAPMIVLLILNIVCFFGGLWRLLNVRDFDEMFGQVFLISYVMALSYPILEGIITMKTKGG*