AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008399.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008399.01.T01 MTR_2g041610 72.301 704 85 11 1 598 1 700 0.0 914
MsG0280008399.01.T01 MTR_2g041610 73.252 572 121 5 1 544 1 568 0.0 778
MsG0280008399.01.T01 MTR_4g125440 48.711 349 141 9 274 593 351 690 1.79e-85 281
MsG0280008399.01.T01 MTR_4g125440 33.550 462 236 13 133 544 123 563 5.90e-62 218
MsG0280008399.01.T01 MTR_4g125410 50.323 310 121 7 309 593 153 454 1.53e-82 266
MsG0280008399.01.T01 MTR_4g125410 31.282 195 108 3 374 544 135 327 1.33e-13 73.6
MsG0280008399.01.T01 MTR_4g125390 41.071 392 172 12 191 566 27 375 1.94e-71 234
MsG0280008399.01.T01 MTR_4g125440 33.623 461 237 13 133 544 123 563 4.32e-63 219
MsG0280008399.01.T01 MTR_4g125440 40.316 253 113 9 274 497 351 594 1.91e-34 138
MsG0280008399.01.T01 MTR_4g125430 35.878 262 144 7 118 372 71 315 8.46e-33 129
MsG0280008399.01.T01 MTR_3g435660 44.167 120 58 3 239 356 135 247 1.27e-24 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008399.01.T01 AT2G06040 39.570 465 232 10 119 547 198 649 1.92e-84 280
MsG0280008399.01.T01 AT2G06040 46.694 242 109 4 340 577 534 759 1.38e-60 215
MsG0280008399.01.T01 AT5G21900 42.775 173 99 0 414 586 369 541 4.30e-34 137
MsG0280008399.01.T01 AT5G21900 31.579 285 158 5 290 544 144 421 1.42e-26 114
MsG0280008399.01.T01 AT5G21900 31.023 303 168 6 290 558 144 439 1.23e-27 116
MsG0280008399.01.T01 AT1G21410 29.412 153 105 2 414 564 124 275 6.93e-12 67.8
MsG0280008399.01.T01 AT1G21410 29.412 153 105 2 414 564 124 275 6.93e-12 67.8
MsG0280008399.01.T01 AT5G23340 29.730 185 110 6 381 552 120 297 9.39e-11 64.7

Find 144 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAAGTGATACTTCTAATT+TGG 0.191612 2:+30687078 MsG0280008399.01.T01:CDS
CATTTCTTTGAACTTCTTAT+TGG 0.235290 2:+30686983 MsG0280008399.01.T01:CDS
CTTCGATTACTTAAACTCTT+TGG 0.259807 2:+30691030 MsG0280008399.01.T01:CDS
CAACTGCGATGAAAATCATT+AGG 0.269062 2:+30686711 MsG0280008399.01.T01:CDS
GAGGATTTGGTGCAGGAAAA+TGG 0.286932 2:+30686641 MsG0280008399.01.T01:CDS
CCAGTGTGGGCGCTGTTTGC+CGG 0.287631 2:+30688983 MsG0280008399.01.T01:CDS
AGGGATAGACTTGTTAAATT+AGG 0.288368 2:-30689050 None:intergenic
AGCTTTGCCGTAACACATTC+AGG 0.289350 2:+30689867 MsG0280008399.01.T01:CDS
CGTTGCAAGAGCTTTGTATT+AGG 0.289669 2:+30686855 MsG0280008399.01.T01:CDS
AAACCGTTTGGCACTGGATT+AGG 0.292832 2:-30686218 None:intergenic
GGTTGGTTCGGGTGCAGTTA+GGG 0.303170 2:-30686126 None:intergenic
AACCCTAGCGGTGGTTGGTT+CGG 0.304604 2:-30686138 None:intergenic
TGGTTGGTTCGGGTGCAGTT+AGG 0.311722 2:-30686127 None:intergenic
AACTCGCAGATCCAGTTAAT+TGG 0.324202 2:+30691266 MsG0280008399.01.T01:CDS
ACCCTAGCGGTGGTTGGTTC+GGG 0.333676 2:-30686137 None:intergenic
TTCGTCAGTCTCTGTTGATT+TGG 0.338334 2:+30691355 MsG0280008399.01.T01:CDS
ACGCGGTGTGAGAAGGAATA+TGG 0.349911 2:+30686547 MsG0280008399.01.T01:CDS
ATCGCTTAATAACGTCAAAA+AGG 0.350909 2:+30690523 MsG0280008399.01.T01:CDS
TGATACTGTGCAGAAGAATT+TGG 0.355669 2:+30686766 MsG0280008399.01.T01:CDS
TTATCCATCTTCTGTTTCTT+CGG 0.360097 2:-30686167 None:intergenic
GAAAATGAAAATAACGAATT+CGG 0.368397 2:+30686422 MsG0280008399.01.T01:CDS
CATCTTCTGTTTCTTCGGTT+CGG 0.373776 2:-30686162 None:intergenic
GTGGAAGTCCAACGGAGATT+CGG 0.374183 2:+30687005 MsG0280008399.01.T01:CDS
TGAAAATAACGAATTCGGTT+TGG 0.385487 2:+30686427 MsG0280008399.01.T01:CDS
AACTGCGATGAAAATCATTA+GGG 0.387377 2:+30686712 MsG0280008399.01.T01:CDS
GGGTGTATGGGTTTAGAGGG+GGG 0.387796 2:-30686008 None:intergenic
GAGAAGAAATTTATTCCATT+CGG 0.395310 2:+30686740 MsG0280008399.01.T01:CDS
TGGAAGTCCAACGGAGATTC+GGG 0.395914 2:+30687006 MsG0280008399.01.T01:CDS
GTGCATGCCGGCTCTCAGAT+GGG 0.399605 2:+30689078 MsG0280008399.01.T01:CDS
GTTCGGAATCCGAAGCGGTT+AGG 0.402463 2:-30686196 None:intergenic
TTCTTTGAACTTCTTATTGG+TGG 0.408327 2:+30686986 MsG0280008399.01.T01:CDS
GGTGCATGCCGGCTCTCAGA+TGG 0.410022 2:+30689077 MsG0280008399.01.T01:CDS
AGAAGAAAGGGAAGGAGATT+CGG 0.413008 2:-30686051 None:intergenic
GCTGCATTTGTGGAGACTAA+TGG 0.415259 2:+30690482 MsG0280008399.01.T01:CDS
CGGTGGTTTGAGTGGGAGTG+AGG 0.422519 2:-30686031 None:intergenic
AGGAGCGGAGGAAGAAGAAA+GGG 0.430373 2:-30686063 None:intergenic
TATCAAACCCATTGCATTGT+CGG 0.432182 2:-30690989 None:intergenic
AGATCAAGCCGACATATTCC+AGG 0.432273 2:-30689770 None:intergenic
GGGTGCAGTTAGGGGTGGTT+CGG 0.433796 2:-30686117 None:intergenic
CTAGCCTGTTCTACAACATT+CGG 0.434163 2:-30686497 None:intergenic
GGGGTGTATGGGTTTAGAGG+GGG 0.435290 2:-30686009 None:intergenic
TGAAAGCGAGGATGAGGATT+TGG 0.439000 2:+30686628 MsG0280008399.01.T01:CDS
TGAAGCAATTGCTGCATTTG+TGG 0.440582 2:+30690472 MsG0280008399.01.T01:CDS
CAATGCAATGGGTTTGATAG+TGG 0.441396 2:+30690993 MsG0280008399.01.T01:CDS
GTTAAATTAGGTAACTGCTT+TGG 0.444163 2:-30689038 None:intergenic
AAAACAGATTCGGAGAAGTT+AGG 0.444746 2:+30686812 MsG0280008399.01.T01:CDS
TGCATGGCTTGCAAGTGATA+AGG 0.445299 2:-30690923 None:intergenic
TTGCATTGTCGGTCAAAGTT+CGG 0.445715 2:-30690978 None:intergenic
TTCACAAAACCGTTTGGCAC+TGG 0.449577 2:-30686224 None:intergenic
GATGCGATTGTTTCGCTTGA+GGG 0.452702 2:+30686896 MsG0280008399.01.T01:CDS
CGCAAGTTCACAAAACCGTT+TGG 0.452820 2:-30686230 None:intergenic
TGTTGTTGTTGTTGATGAAA+AGG 0.453574 2:+30686394 MsG0280008399.01.T01:CDS
GCTGCGGCGGCGAGGAGGAG+CGG 0.456899 2:-30686078 None:intergenic
TGCACAGTCTAGATGTATCT+TGG 0.458788 2:+30690953 MsG0280008399.01.T01:CDS
GTTGGTTCGGGTGCAGTTAG+GGG 0.459481 2:-30686125 None:intergenic
GGTGGTTTGAGTGGGAGTGA+GGG 0.465917 2:-30686030 None:intergenic
TGCCGGATGGTTTGAGGCAT+AGG 0.468191 2:+30686921 MsG0280008399.01.T01:CDS
GTTTGGCACTGGATTAGGTT+CGG 0.468900 2:-30686213 None:intergenic
GTTGTTGCCGAACATTGTCC+TGG 0.469462 2:+30689752 MsG0280008399.01.T01:CDS
TGCATGCCGGCTCTCAGATG+GGG 0.473264 2:+30689079 MsG0280008399.01.T01:CDS
ACATATTCCAGGACAATGTT+CGG 0.477499 2:-30689759 None:intergenic
AAACTAACTAGAGAAGAGAA+AGG 0.484159 2:+30686362 MsG0280008399.01.T01:CDS
AAAGCGCTTTGATGAGGATC+CGG 0.486502 2:-30691326 None:intergenic
ACTTTGACCGACAATGCAAT+GGG 0.486711 2:+30690982 MsG0280008399.01.T01:CDS
AGGAGATTCGGTGGTTTGAG+TGG 0.487748 2:-30686039 None:intergenic
GAGGAGCGGAGGAAGAAGAA+AGG 0.488608 2:-30686064 None:intergenic
AGTACCGAATGTTGTAGAAC+AGG 0.489120 2:+30686493 MsG0280008399.01.T01:CDS
TCCATGGGATATCTTACAAA+CGG 0.500734 2:+30689821 MsG0280008399.01.T01:CDS
ATCGCAGTTGAAAACGGACC+AGG 0.505218 2:-30686698 None:intergenic
GTGGTTTGAGTGGGAGTGAG+GGG 0.506691 2:-30686029 None:intergenic
AACTTTGACCGACAATGCAA+TGG 0.508284 2:+30690981 MsG0280008399.01.T01:CDS
AGAGGAATGAGGTTGAAGAT+TGG 0.509953 2:+30686675 MsG0280008399.01.T01:CDS
GCATGCCGGCTCTCAGATGG+GGG 0.511594 2:+30689080 MsG0280008399.01.T01:CDS
ATTAAGCGATAACTCTATCA+AGG 0.515503 2:-30690510 None:intergenic
AAAAGGAACAAAATCGATGA+AGG 0.520188 2:+30686320 MsG0280008399.01.T01:CDS
GGAGATTCGGTGGTTTGAGT+GGG 0.520320 2:-30686038 None:intergenic
TAAATCAAACCTAACCGCTT+CGG 0.520735 2:+30686187 MsG0280008399.01.T01:CDS
AAGTGATACTTCTAATTTGG+TGG 0.522029 2:+30687081 MsG0280008399.01.T01:CDS
TCTCTAACCCGAATCTCCGT+TGG 0.522278 2:-30687013 None:intergenic
GTGGAAACCGAAAACAGATT+CGG 0.522377 2:+30686802 MsG0280008399.01.T01:CDS
GTATCAACTACCACATAGTC+CGG 0.523790 2:-30689002 None:intergenic
AACTAACTAGAGAAGAGAAA+GGG 0.526273 2:+30686363 MsG0280008399.01.T01:CDS
CAAATTAACAGATTTGTCCA+TGG 0.527395 2:+30689805 MsG0280008399.01.T01:CDS
CTCAGAACAACACTTCCAAA+AGG 0.529726 2:+30686303 MsG0280008399.01.T01:CDS
AGCCTATGCCTCAAACCATC+CGG 0.529918 2:-30686923 None:intergenic
CGAACCGAAGAAACAGAAGA+TGG 0.530369 2:+30686163 MsG0280008399.01.T01:CDS
GCGGCGGCGAGGAGGAGCGG+AGG 0.533565 2:-30686075 None:intergenic
CGAGGATGAGGATTTGGTGC+AGG 0.534218 2:+30686634 MsG0280008399.01.T01:CDS
TGTTTCGCTTGAGGGTGTGC+CGG 0.539181 2:+30686904 MsG0280008399.01.T01:CDS
AAATTAACAGATTTGTCCAT+GGG 0.540891 2:+30689806 MsG0280008399.01.T01:CDS
ACAGGCACCTGAATGTGTTA+CGG 0.541328 2:-30689874 None:intergenic
CGGAGGCTGCGGCGGCGAGG+AGG 0.542372 2:-30686083 None:intergenic
AGTTAGCGAGACGGAGGCTG+CGG 0.543800 2:-30686094 None:intergenic
TACTGCAACTTGACCAGTGT+GGG 0.543924 2:+30688970 MsG0280008399.01.T01:CDS
TCGCTTGAGGGTGTGCCGGA+TGG 0.543954 2:+30686908 MsG0280008399.01.T01:CDS
CACCCGAACCAACCACCGCT+AGG 0.546341 2:+30686135 MsG0280008399.01.T01:CDS
GAGAGGAACGCGGTGTGAGA+AGG 0.547992 2:+30686540 MsG0280008399.01.T01:CDS
ATTTGGTTGATACCATAAAG+TGG 0.548606 2:+30686783 MsG0280008399.01.T01:CDS
AGGAGAAGAAGAGAGGAATG+AGG 0.549272 2:+30686664 MsG0280008399.01.T01:CDS
TTTGCAACATGTCAAAGTGC+CGG 0.551362 2:+30691307 MsG0280008399.01.T01:CDS
GCGGAGGAAGAAGAAAGGGA+AGG 0.556469 2:-30686059 None:intergenic
TCGGAAACCCTAGCGGTGGT+TGG 0.557049 2:-30686143 None:intergenic
GGTTCGGGTGCAGTTAGGGG+TGG 0.558102 2:-30686122 None:intergenic
TGGTTTGAGTGGGAGTGAGG+GGG 0.560585 2:-30686028 None:intergenic
TAGCGAGACGGAGGCTGCGG+CGG 0.568680 2:-30686091 None:intergenic
ACTGGATCTGCGAGTTTGAG+TGG 0.569982 2:-30691259 None:intergenic
AAAATGGAGGAGAAGAAGAG+AGG 0.570097 2:+30686657 MsG0280008399.01.T01:CDS
TGATGCGATTGTTTCGCTTG+AGG 0.575887 2:+30686895 MsG0280008399.01.T01:CDS
GAATGATGAAAGCGAGGATG+AGG 0.577157 2:+30686622 MsG0280008399.01.T01:CDS
GAACCTAATCCAGTGCCAAA+CGG 0.577953 2:+30686215 MsG0280008399.01.T01:CDS
AGACGGAGGCTGCGGCGGCG+AGG 0.581087 2:-30686086 None:intergenic
ACCCGAACCAACCACCGCTA+GGG 0.585681 2:+30686136 MsG0280008399.01.T01:CDS
AGGGTGTGCCGGATGGTTTG+AGG 0.587747 2:+30686915 MsG0280008399.01.T01:CDS
AATGAGGTTGAAGATTGGCC+TGG 0.587970 2:+30686680 MsG0280008399.01.T01:CDS
AGAAAGGGAAGGAGATTCGG+TGG 0.590885 2:-30686048 None:intergenic
ATCGATGAAGGAGAATCTAG+TGG 0.594134 2:+30686332 MsG0280008399.01.T01:CDS
GCGCTGTTTGCCGGACTATG+TGG 0.594249 2:+30688992 MsG0280008399.01.T01:CDS
ACCGTTTGTAAGATATCCCA+TGG 0.594814 2:-30689822 None:intergenic
TAAACTCTTTGGATGCACTC+AGG 0.596773 2:+30691041 MsG0280008399.01.T01:CDS
CGGTTCGGAAACCCTAGCGG+TGG 0.597223 2:-30686147 None:intergenic
AGATTGCTCGTGGTTGTCTG+AGG 0.600665 2:+30687033 MsG0280008399.01.T01:CDS
TGCTAATAATAACGCGAGAG+AGG 0.602144 2:+30686523 MsG0280008399.01.T01:CDS
CATGCCGGCTCTCAGATGGG+GGG 0.602507 2:+30689081 MsG0280008399.01.T01:CDS
TCTTATTGGTGGAAGTCCAA+CGG 0.603173 2:+30686997 MsG0280008399.01.T01:CDS
ATACAAAGCTCTTGCAACGA+CGG 0.605369 2:-30686851 None:intergenic
TATCCCTCAGTGGTGCATGC+CGG 0.608417 2:+30689066 MsG0280008399.01.T01:CDS
TAATTCAAAGCGCTTTGATG+AGG 0.609041 2:-30691332 None:intergenic
CCGGCAAACAGCGCCCACAC+TGG 0.611269 2:-30688983 None:intergenic
ACAGATTCGGAGAAGTTAGG+TGG 0.613185 2:+30686815 MsG0280008399.01.T01:CDS
AACATTGTCCTGGAATATGT+CGG 0.614087 2:+30689762 MsG0280008399.01.T01:CDS
AACTAGAGAAGAGAAAGGGA+AGG 0.617970 2:+30686367 MsG0280008399.01.T01:CDS
TTCGGGTTAGAGATTGCTCG+TGG 0.621620 2:+30687023 MsG0280008399.01.T01:CDS
GAGCCGGCATGCACCACTGA+GGG 0.623330 2:-30689069 None:intergenic
TGCACAGTATCAGAACCGAA+TGG 0.646244 2:-30686755 None:intergenic
ATTAGGTTCGGAATCCGAAG+CGG 0.652218 2:-30686201 None:intergenic
CTTCGGTTCGGAAACCCTAG+CGG 0.661645 2:-30686150 None:intergenic
GATTTGGTGCAGGAAAATGG+AGG 0.666697 2:+30686644 MsG0280008399.01.T01:CDS
AGAGCCGGCATGCACCACTG+AGG 0.670227 2:-30689070 None:intergenic
GTTCGGAGTTAGCGAGACGG+AGG 0.674974 2:-30686100 None:intergenic
GTGGTTCGGAGTTAGCGAGA+CGG 0.683124 2:-30686103 None:intergenic
GTACTGCAACTTGACCAGTG+TGG 0.716069 2:+30688969 MsG0280008399.01.T01:CDS
TTAACAAGTCTATCCCTCAG+TGG 0.717702 2:+30689056 MsG0280008399.01.T01:CDS
AGCTGTAGTTGAGAACATTG+CGG 0.718945 2:+30686457 MsG0280008399.01.T01:CDS
AATAACGCGAGAGAGGAACG+CGG 0.781566 2:+30686530 MsG0280008399.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAAAATATCTATATAA+AGG - Chr2:30688762-30688781 None:intergenic 10.0%
!! AAAGCTAGATAAATATAAAT+AGG - Chr2:30688832-30688851 None:intergenic 15.0%
!! TAATAATTTACTCAAATTGT+AGG + Chr2:30689631-30689650 MsG0280008399.01.T01:intron 15.0%
!! TATTCATATAAGTAATTTCT+TGG + Chr2:30689449-30689468 MsG0280008399.01.T01:intron 15.0%
!! TTACTTATATGAATATCTTT+AGG - Chr2:30689444-30689463 None:intergenic 15.0%
!! TTTAACATAAATACCAAATT+AGG - Chr2:30689527-30689546 None:intergenic 15.0%
!!! AGATTAGTTTATACATTAAT+TGG - Chr2:30690430-30690449 None:intergenic 15.0%
!!! ATAACATTTTATGATTTACA+CGG - Chr2:30688636-30688655 None:intergenic 15.0%
!!! GATTAGTTTATACATTAATT+GGG - Chr2:30690429-30690448 None:intergenic 15.0%
!!! TAATAAAAAAAACGTTTTTG+AGG - Chr2:30691087-30691106 None:intergenic 15.0%
!!! TATCATTTATCTAATTTTTG+TGG + Chr2:30688653-30688672 MsG0280008399.01.T01:intron 15.0%
!!! TGTACAATAAATTTGTTAAA+AGG + Chr2:30687889-30687908 MsG0280008399.01.T01:intron 15.0%
!!! TTCAATTTTGAATTTGAAAT+AGG + Chr2:30688947-30688966 MsG0280008399.01.T01:intron 15.0%
!! AAAATTCATAATCAAAAGTG+AGG - Chr2:30689994-30690013 None:intergenic 20.0%
!! AAATATCTATATAAAGGAAC+CGG - Chr2:30688756-30688775 None:intergenic 20.0%
!! AATATAATTTCACGAAAAAC+CGG - Chr2:30690721-30690740 None:intergenic 20.0%
!! AATTAAACACAGACAAATAT+AGG - Chr2:30689911-30689930 None:intergenic 20.0%
!! AATTGAGTTTAGATTAACTT+TGG + Chr2:30687543-30687562 MsG0280008399.01.T01:intron 20.0%
!! AGAGAAAATTTAACCTAATT+TGG + Chr2:30689511-30689530 MsG0280008399.01.T01:intron 20.0%
!! CAAATATTTCACTAAAACTT+AGG + Chr2:30687775-30687794 MsG0280008399.01.T01:intron 20.0%
!! CAATTTAAAAAGAACGATAT+TGG - Chr2:30689551-30689570 None:intergenic 20.0%
!! GAAAATGAAAATAACGAATT+CGG + Chr2:30686422-30686441 MsG0280008399.01.T01:CDS 20.0%
!! TAAAAGATTCAGAATCAATT+TGG + Chr2:30688258-30688277 MsG0280008399.01.T01:intron 20.0%
!! TAAAATGTAGTGTAATTATC+TGG + Chr2:30691164-30691183 MsG0280008399.01.T01:intron 20.0%
!! TATTGAGAAAGAAAGAAAAA+AGG - Chr2:30689659-30689678 None:intergenic 20.0%
!! TATTTGTCTGTGTTTAATTA+TGG + Chr2:30689912-30689931 MsG0280008399.01.T01:intron 20.0%
!!! AACTTTTCAATAAAGATTTG+TGG + Chr2:30688284-30688303 MsG0280008399.01.T01:intron 20.0%
!!! ATAGTTTTTCTAGAGTTTAA+TGG + Chr2:30690104-30690123 MsG0280008399.01.T01:intron 20.0%
!!! ATTTCTTTTATTCTTCATGA+AGG - Chr2:30691199-30691218 None:intergenic 20.0%
!!! ATTTTTACTATAATATCCTC+AGG - Chr2:30687994-30688013 None:intergenic 20.0%
!!! GCAATTTCATTTTAGATAAT+TGG + Chr2:30689471-30689490 MsG0280008399.01.T01:intron 20.0%
!!! GTTTTTTAATATCATGAACT+GGG + Chr2:30687833-30687852 MsG0280008399.01.T01:intron 20.0%
!!! TAAAGTGTTTCATGTAATTT+TGG + Chr2:30687610-30687629 MsG0280008399.01.T01:intron 20.0%
!!! TAGTTTTTCTAGAGTTTAAT+GGG + Chr2:30690105-30690124 MsG0280008399.01.T01:intron 20.0%
!!! TCATTTTTATACCAATTAAC+TGG - Chr2:30691280-30691299 None:intergenic 20.0%
!!! TGTTTTTTAATATCATGAAC+TGG + Chr2:30687832-30687851 MsG0280008399.01.T01:intron 20.0%
!!! TTAAGAATTTTTTGCAAAAC+AGG - Chr2:30690328-30690347 None:intergenic 20.0%
!!! TTTGAAAGATTTGATAATCT+GGG + Chr2:30688911-30688930 MsG0280008399.01.T01:intron 20.0%
!!! TTTTGAAAGATTTGATAATC+TGG + Chr2:30688910-30688929 MsG0280008399.01.T01:intron 20.0%
!!! TTTTGCAAAAAATTCTTAAG+AGG + Chr2:30690329-30690348 MsG0280008399.01.T01:intron 20.0%
! AAATTAACAGATTTGTCCAT+GGG + Chr2:30689806-30689825 MsG0280008399.01.T01:CDS 25.0%
! ACAAAAGTAAGACTTGAATT+GGG - Chr2:30690384-30690403 None:intergenic 25.0%
! AGAAAATATCCAATAACTAC+TGG + Chr2:30688324-30688343 MsG0280008399.01.T01:intron 25.0%
! AGAAAGTGATACTTCTAATT+TGG + Chr2:30687078-30687097 MsG0280008399.01.T01:CDS 25.0%
! ATGCACATTTAAAAACAAAC+AGG + Chr2:30690627-30690646 MsG0280008399.01.T01:intron 25.0%
! ATTTATAATTGCCTAAAACC+AGG - Chr2:30688132-30688151 None:intergenic 25.0%
! CAATATAACTAAGAATTAGC+AGG - Chr2:30690851-30690870 None:intergenic 25.0%
! CATTTCTTTGAACTTCTTAT+TGG + Chr2:30686983-30687002 MsG0280008399.01.T01:CDS 25.0%
! GAAAATTATAGCACATTACA+TGG + Chr2:30688533-30688552 MsG0280008399.01.T01:intron 25.0%
! GAGAAGAAATTTATTCCATT+CGG + Chr2:30686740-30686759 MsG0280008399.01.T01:CDS 25.0%
! GATTGAGTTTAGATTAACTT+TGG + Chr2:30687303-30687322 MsG0280008399.01.T01:intron 25.0%
! TATATGACTCTATAAGACAT+CGG + Chr2:30688478-30688497 MsG0280008399.01.T01:intron 25.0%
! TTTATAATTGCCTAAAACCA+GGG - Chr2:30688131-30688150 None:intergenic 25.0%
! TTTGTGCTTAATCAAATCAT+GGG + Chr2:30690399-30690418 MsG0280008399.01.T01:intron 25.0%
!! AGCACTTAAATGATATTTTG+AGG + Chr2:30687741-30687760 MsG0280008399.01.T01:intron 25.0%
!! ATCTTTTTACAAACACAAAG+CGG - Chr2:30690682-30690701 None:intergenic 25.0%
!! ATTTGTTAAAAGGCTATAGA+AGG + Chr2:30687899-30687918 MsG0280008399.01.T01:intron 25.0%
!! GTTAAATATTTCTGCCTATT+TGG + Chr2:30690801-30690820 MsG0280008399.01.T01:intron 25.0%
!! TAGGTTAAATTTTCTCTGAT+TGG - Chr2:30689508-30689527 None:intergenic 25.0%
!! TATCAAGAAGAAGAAACTTT+TGG + Chr2:30688073-30688092 MsG0280008399.01.T01:intron 25.0%
!! TTAACAGATGTTTTTCTGAA+GGG + Chr2:30691236-30691255 MsG0280008399.01.T01:CDS 25.0%
!! TTTTGTGCTTAATCAAATCA+TGG + Chr2:30690398-30690417 MsG0280008399.01.T01:intron 25.0%
!!! AGTTTTTCTAGAGTTTAATG+GGG + Chr2:30690106-30690125 MsG0280008399.01.T01:intron 25.0%
!!! ATTATAATTTTAGCTAGCTG+AGG + Chr2:30690776-30690795 MsG0280008399.01.T01:intron 25.0%
!!! CACTACTAGAGTTTTAAAAA+AGG - Chr2:30687690-30687709 None:intergenic 25.0%
!!! CACTTAAATGATATTTTGAG+GGG + Chr2:30687743-30687762 MsG0280008399.01.T01:intron 25.0%
!!! CTTAAGATTTAATTTGCTTC+TGG + Chr2:30688876-30688895 MsG0280008399.01.T01:intron 25.0%
!!! GCACTTAAATGATATTTTGA+GGG + Chr2:30687742-30687761 MsG0280008399.01.T01:intron 25.0%
AAAAGGAACAAAATCGATGA+AGG + Chr2:30686320-30686339 MsG0280008399.01.T01:CDS 30.0%
AAACTAACTAGAGAAGAGAA+AGG + Chr2:30686362-30686381 MsG0280008399.01.T01:CDS 30.0%
AACCTGGATTAAATCAAATG+AGG - Chr2:30690890-30690909 None:intergenic 30.0%
AACTAACTAGAGAAGAGAAA+GGG + Chr2:30686363-30686382 MsG0280008399.01.T01:CDS 30.0%
AACTGCGATGAAAATCATTA+GGG + Chr2:30686712-30686731 MsG0280008399.01.T01:CDS 30.0%
AAGTGATACTTCTAATTTGG+TGG + Chr2:30687081-30687100 MsG0280008399.01.T01:CDS 30.0%
AATAAAACAGTCAAACAGCA+TGG - Chr2:30690065-30690084 None:intergenic 30.0%
AATCTTTCAAAACAAGAAGC+CGG - Chr2:30688902-30688921 None:intergenic 30.0%
AATGTCAGTATGTCACTATT+AGG - Chr2:30687519-30687538 None:intergenic 30.0%
ACATCGGTACAATATGAATA+TGG + Chr2:30688494-30688513 MsG0280008399.01.T01:intron 30.0%
ACTGATAATCCAATCCAAAT+AGG - Chr2:30690818-30690837 None:intergenic 30.0%
AGGTTTATTGATCTAAGAGT+TGG - Chr2:30689131-30689150 None:intergenic 30.0%
ATACAATCACCAACATAAGA+GGG - Chr2:30691138-30691157 None:intergenic 30.0%
ATATAGGAAACAGGAAAAAC+AGG - Chr2:30689895-30689914 None:intergenic 30.0%
ATATGGGGATATGAGAAATT+TGG + Chr2:30688511-30688530 MsG0280008399.01.T01:intron 30.0%
ATCGCTTAATAACGTCAAAA+AGG + Chr2:30690523-30690542 MsG0280008399.01.T01:CDS 30.0%
ATCGGTACAATATGAATATG+GGG + Chr2:30688496-30688515 MsG0280008399.01.T01:intron 30.0%
ATGCATTCAAGTGATAAGAA+TGG + Chr2:30690193-30690212 MsG0280008399.01.T01:intron 30.0%
ATGTAGAAACCAGTAGTTAT+TGG - Chr2:30688336-30688355 None:intergenic 30.0%
ATGTCAGTATGTCACTATTA+GGG - Chr2:30687518-30687537 None:intergenic 30.0%
ATTAAGCGATAACTCTATCA+AGG - Chr2:30690513-30690532 None:intergenic 30.0%
ATTTCACTAAAACTTAGGTG+CGG + Chr2:30687780-30687799 MsG0280008399.01.T01:intron 30.0%
CAAAAGTAAGACTTGAATTG+GGG - Chr2:30690383-30690402 None:intergenic 30.0%
CAAATTAACAGATTTGTCCA+TGG + Chr2:30689805-30689824 MsG0280008399.01.T01:CDS 30.0%
CACAAAAGTAAGACTTGAAT+TGG - Chr2:30690385-30690404 None:intergenic 30.0%
CATCGGTACAATATGAATAT+GGG + Chr2:30688495-30688514 MsG0280008399.01.T01:intron 30.0%
CTTCGATTACTTAAACTCTT+TGG + Chr2:30691030-30691049 MsG0280008399.01.T01:CDS 30.0%
GATTTAATGCTCTATTTGTC+CGG + Chr2:30690699-30690718 MsG0280008399.01.T01:intron 30.0%
GTTAAATTAGGTAACTGCTT+TGG - Chr2:30689041-30689060 None:intergenic 30.0%
TAACGGTCAAATTTCATTTG+AGG + Chr2:30687481-30687500 MsG0280008399.01.T01:intron 30.0%
TACTGATATACTTCTGTTGT+AGG + Chr2:30687711-30687730 MsG0280008399.01.T01:intron 30.0%
TATACAATCACCAACATAAG+AGG - Chr2:30691139-30691158 None:intergenic 30.0%
TCGTGAAATTATATTGCTCA+AGG + Chr2:30690726-30690745 MsG0280008399.01.T01:intron 30.0%
TCGTTGAATTATTGCAAACA+GGG + Chr2:30687382-30687401 MsG0280008399.01.T01:intron 30.0%
TCTTATCACTTGAATGCATA+TGG - Chr2:30690192-30690211 None:intergenic 30.0%
TGAAAATAACGAATTCGGTT+TGG + Chr2:30686427-30686446 MsG0280008399.01.T01:CDS 30.0%
TGTTGATCATTCTTTGAACA+TGG + Chr2:30689569-30689588 MsG0280008399.01.T01:intron 30.0%
TTAGATTAACTTTGGTCAGT+AGG + Chr2:30687551-30687570 MsG0280008399.01.T01:intron 30.0%
TTCGTTGAATTATTGCAAAC+AGG + Chr2:30687381-30687400 MsG0280008399.01.T01:intron 30.0%
TTCTTTGAACTTCTTATTGG+TGG + Chr2:30686986-30687005 MsG0280008399.01.T01:CDS 30.0%
TTGTGCTTAATCAAATCATG+GGG + Chr2:30690400-30690419 MsG0280008399.01.T01:intron 30.0%
TTGTTAGATTGTCGTGATTA+AGG + Chr2:30687150-30687169 MsG0280008399.01.T01:intron 30.0%
! AAGAAGAAGAAACTTTTGGA+GGG + Chr2:30688077-30688096 MsG0280008399.01.T01:intron 30.0%
! ATATTTCTGCCTATTTGGAT+TGG + Chr2:30690806-30690825 MsG0280008399.01.T01:intron 30.0%
! ATTTGGTTGATACCATAAAG+TGG + Chr2:30686783-30686802 MsG0280008399.01.T01:CDS 30.0%
! ATTTTCATCGCAGTTGAAAA+CGG - Chr2:30686707-30686726 None:intergenic 30.0%
! GTTAACAGATGTTTTTCTGA+AGG + Chr2:30691235-30691254 MsG0280008399.01.T01:intron 30.0%
! TCATTTGATTTAATCCAGGT+TGG + Chr2:30690889-30690908 MsG0280008399.01.T01:intron 30.0%
! TGAATTTTCCTGTTCTTGTT+TGG + Chr2:30690006-30690025 MsG0280008399.01.T01:intron 30.0%
! TGTTGTTGTTGTTGATGAAA+AGG + Chr2:30686394-30686413 MsG0280008399.01.T01:CDS 30.0%
! TTATCCATCTTCTGTTTCTT+CGG - Chr2:30686170-30686189 None:intergenic 30.0%
! TTTTCATCAACAACAACAAC+AGG - Chr2:30686395-30686414 None:intergenic 30.0%
!! AAATTTAGAAGTGTTGTCAG+TGG + Chr2:30689288-30689307 MsG0280008399.01.T01:intron 30.0%
!! AATTTTCCTGTTCTTGTTTG+GGG + Chr2:30690008-30690027 MsG0280008399.01.T01:intron 30.0%
!! AGGGATAGACTTGTTAAATT+AGG - Chr2:30689053-30689072 None:intergenic 30.0%
!! GAATTTTCCTGTTCTTGTTT+GGG + Chr2:30690007-30690026 MsG0280008399.01.T01:intron 30.0%
!!! TTCATCGATTTTGTTCCTTT+TGG - Chr2:30686321-30686340 None:intergenic 30.0%
AAAACAGATTCGGAGAAGTT+AGG + Chr2:30686812-30686831 MsG0280008399.01.T01:CDS 35.0%
AACATTGTCCTGGAATATGT+CGG + Chr2:30689762-30689781 MsG0280008399.01.T01:CDS 35.0%
AACTATCAACATTTGACTGC+TGG - Chr2:30690090-30690109 None:intergenic 35.0%
AAGAATGGTCTCTCTTATGT+TGG + Chr2:30690208-30690227 MsG0280008399.01.T01:intron 35.0%
ACATATTCCAGGACAATGTT+CGG - Chr2:30689762-30689781 None:intergenic 35.0%
ACTTGAACATTCTGATATGC+TGG + Chr2:30690651-30690670 MsG0280008399.01.T01:intron 35.0%
ATAATAAAGCTTCCTCCATC+AGG - Chr2:30690761-30690780 None:intergenic 35.0%
ATCATAGTTCCCTCTTATGT+TGG + Chr2:30691126-30691145 MsG0280008399.01.T01:intron 35.0%
CAACTGCGATGAAAATCATT+AGG + Chr2:30686711-30686730 MsG0280008399.01.T01:CDS 35.0%
CACAGACAAATATAGGAAAC+AGG - Chr2:30689904-30689923 None:intergenic 35.0%
CACATTACATGGCTTAGAAT+TGG + Chr2:30688544-30688563 MsG0280008399.01.T01:intron 35.0%
CACTACAACTAAAATTGAGC+CGG - Chr2:30687443-30687462 None:intergenic 35.0%
CATCTGTCAGTCTTCATATT+TGG + Chr2:30689171-30689190 MsG0280008399.01.T01:intron 35.0%
CATGAAAGAGCTTATTCTGA+AGG + Chr2:30689371-30689390 MsG0280008399.01.T01:intron 35.0%
CTGTTTGTGATACTTTGTCA+AGG + Chr2:30689323-30689342 MsG0280008399.01.T01:intron 35.0%
GAATTGGGGAATCAATCAAT+AGG - Chr2:30690369-30690388 None:intergenic 35.0%
TAAATCAAACCTAACCGCTT+CGG + Chr2:30686187-30686206 MsG0280008399.01.T01:CDS 35.0%
TATCAAACCCATTGCATTGT+CGG - Chr2:30690992-30691011 None:intergenic 35.0%
TCCATGGGATATCTTACAAA+CGG + Chr2:30689821-30689840 MsG0280008399.01.T01:CDS 35.0%
TCTCCATTGTCTTGTGAAAA+GGG + Chr2:30690576-30690595 MsG0280008399.01.T01:intron 35.0%
TGATACTGTGCAGAAGAATT+TGG + Chr2:30686766-30686785 MsG0280008399.01.T01:CDS 35.0%
TTTAACACCGTGTAGAAGTT+TGG + Chr2:30688191-30688210 MsG0280008399.01.T01:intron 35.0%
TTTAATGGGGCATATACTGT+CGG + Chr2:30690119-30690138 MsG0280008399.01.T01:intron 35.0%
! AACTTCTCCGAATCTGTTTT+CGG - Chr2:30686812-30686831 None:intergenic 35.0%
! AGCTAAAAGAGTGTGTGATT+GGG + Chr2:30688440-30688459 MsG0280008399.01.T01:intron 35.0%
! ATACCCTTTTCACAAGACAA+TGG - Chr2:30690582-30690601 None:intergenic 35.0%
! ATACTGTCGGTGTTTCAAAT+TGG + Chr2:30690132-30690151 MsG0280008399.01.T01:intron 35.0%
! CAAGAAGAAGAAACTTTTGG+AGG + Chr2:30688076-30688095 MsG0280008399.01.T01:intron 35.0%
! GACAAAGTATCACAAACAGT+TGG - Chr2:30689322-30689341 None:intergenic 35.0%
! TAATTCAAAGCGCTTTGATG+AGG - Chr2:30691335-30691354 None:intergenic 35.0%
! TATCGAACACTTTGCTGTAA+CGG + Chr2:30687464-30687483 MsG0280008399.01.T01:intron 35.0%
! TGCCTCATTTGATTTAATCC+AGG + Chr2:30690885-30690904 MsG0280008399.01.T01:intron 35.0%
! TGTTTTCGGTTTCCACTTTA+TGG - Chr2:30686798-30686817 None:intergenic 35.0%
! TTTTGTGAATGATGAAAGCG+AGG + Chr2:30686616-30686635 MsG0280008399.01.T01:CDS 35.0%
!! AGAAGAAGAAACTTTTGGAG+GGG + Chr2:30688078-30688097 MsG0280008399.01.T01:intron 35.0%
!! AGATTTAATTTGCTTCTGGC+CGG + Chr2:30688880-30688899 MsG0280008399.01.T01:intron 35.0%
!! CTGTTATTTAGAAGTGTCTC+CGG + Chr2:30688734-30688753 MsG0280008399.01.T01:intron 35.0%
!! GTTTGGGGTGAGATTTTTAA+AGG + Chr2:30690023-30690042 MsG0280008399.01.T01:intron 35.0%
!!! AAAAAAACGTTTTTGAGGCG+AGG - Chr2:30691082-30691101 None:intergenic 35.0%
!!! GACTGTGCAATTTTTTTGCA+TGG - Chr2:30690942-30690961 None:intergenic 35.0%
!!! TAGCCTAGCACTCTTATTTT+TGG + Chr2:30689954-30689973 MsG0280008399.01.T01:intron 35.0%
AAAATGGAGGAGAAGAAGAG+AGG + Chr2:30686657-30686676 MsG0280008399.01.T01:CDS 40.0%
AAATAGGTCGGAACCTGTTT+AGG - Chr2:30690265-30690284 None:intergenic 40.0%
AACTAGAGAAGAGAAAGGGA+AGG + Chr2:30686367-30686386 MsG0280008399.01.T01:CDS 40.0%
AACTCGCAGATCCAGTTAAT+TGG + Chr2:30691266-30691285 MsG0280008399.01.T01:CDS 40.0%
AACTTTGACCGACAATGCAA+TGG + Chr2:30690981-30691000 MsG0280008399.01.T01:CDS 40.0%
AAGACTGACAGATGTGAGAA+GGG - Chr2:30689165-30689184 None:intergenic 40.0%
AAGGATTACATTGTTGCACG+TGG + Chr2:30689342-30689361 MsG0280008399.01.T01:intron 40.0%
AATAGGTCGGAACCTGTTTA+GGG - Chr2:30690264-30690283 None:intergenic 40.0%
AATGGAGAGAGAATCACATG+AGG - Chr2:30690564-30690583 None:intergenic 40.0%
ACCGTTTGTAAGATATCCCA+TGG - Chr2:30689825-30689844 None:intergenic 40.0%
ACTTTGACCGACAATGCAAT+GGG + Chr2:30690982-30691001 MsG0280008399.01.T01:CDS 40.0%
AGAAGAAAGGGAAGGAGATT+CGG - Chr2:30686054-30686073 None:intergenic 40.0%
AGAGGAATGAGGTTGAAGAT+TGG + Chr2:30686675-30686694 MsG0280008399.01.T01:CDS 40.0%
AGAGGGAACTATGATATCAG+TGG - Chr2:30691121-30691140 None:intergenic 40.0%
AGCTGTAGTTGAGAACATTG+CGG + Chr2:30686457-30686476 MsG0280008399.01.T01:CDS 40.0%
ATAATTGCCTAAAACCAGGG+CGG - Chr2:30688128-30688147 None:intergenic 40.0%
ATACAAAGCTCTTGCAACGA+CGG - Chr2:30686854-30686873 None:intergenic 40.0%
ATCGATGAAGGAGAATCTAG+TGG + Chr2:30686332-30686351 MsG0280008399.01.T01:CDS 40.0%
CTAGCCTGTTCTACAACATT+CGG - Chr2:30686500-30686519 None:intergenic 40.0%
CTCAGAACAACACTTCCAAA+AGG + Chr2:30686303-30686322 MsG0280008399.01.T01:CDS 40.0%
CTCTCCATTGTCTTGTGAAA+AGG + Chr2:30690575-30690594 MsG0280008399.01.T01:intron 40.0%
CTGCATTGTCAGTTGTATCA+AGG - Chr2:30687660-30687679 None:intergenic 40.0%
GTATCAACTACCACATAGTC+CGG - Chr2:30689005-30689024 None:intergenic 40.0%
GTGGAAACCGAAAACAGATT+CGG + Chr2:30686802-30686821 MsG0280008399.01.T01:CDS 40.0%
TAAAATTGAGCCGGCATTTG+CGG - Chr2:30687434-30687453 None:intergenic 40.0%
TAAACTCTTTGGATGCACTC+AGG + Chr2:30691041-30691060 MsG0280008399.01.T01:CDS 40.0%
TAGTTAGATACCGCAAATGC+CGG + Chr2:30687421-30687440 MsG0280008399.01.T01:intron 40.0%
TATACTTCTGTTGTAGGCAG+TGG + Chr2:30687717-30687736 MsG0280008399.01.T01:intron 40.0%
TATCAAACTCGCTGATGTAG+CGG + Chr2:30687232-30687251 MsG0280008399.01.T01:intron 40.0%
TCTTATTGGTGGAAGTCCAA+CGG + Chr2:30686997-30687016 MsG0280008399.01.T01:CDS 40.0%
TGAAGCAATTGCTGCATTTG+TGG + Chr2:30690472-30690491 MsG0280008399.01.T01:CDS 40.0%
TGCACAGTCTAGATGTATCT+TGG + Chr2:30690953-30690972 MsG0280008399.01.T01:CDS 40.0%
TGCTAATAATAACGCGAGAG+AGG + Chr2:30686523-30686542 MsG0280008399.01.T01:CDS 40.0%
TGGGGAATCAATCAATAGGA+GGG - Chr2:30690365-30690384 None:intergenic 40.0%
TTAACAAGTCTATCCCTCAG+TGG + Chr2:30689056-30689075 MsG0280008399.01.T01:CDS 40.0%
TTGCATTGTCGGTCAAAGTT+CGG - Chr2:30690981-30691000 None:intergenic 40.0%
TTGGGGAATCAATCAATAGG+AGG - Chr2:30690366-30690385 None:intergenic 40.0%
TTTGCAACATGTCAAAGTGC+CGG + Chr2:30691307-30691326 MsG0280008399.01.T01:CDS 40.0%
! AAATGCTAGCTTCCTTACCT+TGG + Chr2:30688411-30688430 MsG0280008399.01.T01:intron 40.0%
! ACTTCTAATTTGGTGGTACG+TGG + Chr2:30687088-30687107 MsG0280008399.01.T01:intron 40.0%
! AGTACCGAATGTTGTAGAAC+AGG + Chr2:30686493-30686512 MsG0280008399.01.T01:CDS 40.0%
! CAATGCAATGGGTTTGATAG+TGG + Chr2:30690993-30691012 MsG0280008399.01.T01:CDS 40.0%
! CATCTTCTGTTTCTTCGGTT+CGG - Chr2:30686165-30686184 None:intergenic 40.0%
! CGTTGCAAGAGCTTTGTATT+AGG + Chr2:30686855-30686874 MsG0280008399.01.T01:CDS 40.0%
! GAGCTAAAAGAGTGTGTGAT+TGG + Chr2:30688439-30688458 MsG0280008399.01.T01:intron 40.0%
! GCAAACAGGGTTTGAAATTG+CGG + Chr2:30687395-30687414 MsG0280008399.01.T01:intron 40.0%
! GTCAGTTGTATCAAGGTGTT+TGG - Chr2:30687653-30687672 None:intergenic 40.0%
! TTCCGACCTATTTTGCTGAT+TGG + Chr2:30690272-30690291 MsG0280008399.01.T01:intron 40.0%
! TTCGTCAGTCTCTGTTGATT+TGG + Chr2:30691355-30691374 MsG0280008399.01.T01:CDS 40.0%
!! AAACTTAGGTGCGGTTTTGT+TGG + Chr2:30687789-30687808 MsG0280008399.01.T01:intron 40.0%
!! GCACCAAAAATAAGAGTGCT+AGG - Chr2:30689960-30689979 None:intergenic 40.0%
!! GGGGTGAGATTTTTAAAGGA+TGG + Chr2:30690027-30690046 MsG0280008399.01.T01:intron 40.0%
AACGATATATCGCAGCCTAG+TGG - Chr2:30687939-30687958 None:intergenic 45.0%
ACAGATTCGGAGAAGTTAGG+TGG + Chr2:30686815-30686834 MsG0280008399.01.T01:CDS 45.0%
ACAGGCACCTGAATGTGTTA+CGG - Chr2:30689877-30689896 None:intergenic 45.0%
ACATAGATAGACAAAGCCCC+TGG - Chr2:30690298-30690317 None:intergenic 45.0%
AGATCAAGCCGACATATTCC+AGG - Chr2:30689773-30689792 None:intergenic 45.0%
AGCTACAAAGTGAGCAAAGC+AGG - Chr2:30688807-30688826 None:intergenic 45.0%
AGCTTTGCCGTAACACATTC+AGG + Chr2:30689867-30689886 MsG0280008399.01.T01:CDS 45.0%
AGGAGAAGAAGAGAGGAATG+AGG + Chr2:30686664-30686683 MsG0280008399.01.T01:CDS 45.0%
ATCTCACCCCAAACAAGAAC+AGG - Chr2:30690017-30690036 None:intergenic 45.0%
ATTAGGTTCGGAATCCGAAG+CGG - Chr2:30686204-30686223 None:intergenic 45.0%
CGAACCGAAGAAACAGAAGA+TGG + Chr2:30686163-30686182 MsG0280008399.01.T01:CDS 45.0%
CGCAAGTTCACAAAACCGTT+TGG - Chr2:30686233-30686252 None:intergenic 45.0%
CTATAGAAGGACTTGATCCC+AGG + Chr2:30687912-30687931 MsG0280008399.01.T01:intron 45.0%
GAACCTAATCCAGTGCCAAA+CGG + Chr2:30686215-30686234 MsG0280008399.01.T01:CDS 45.0%
GAAGACTGACAGATGTGAGA+AGG - Chr2:30689166-30689185 None:intergenic 45.0%
GAATGATGAAAGCGAGGATG+AGG + Chr2:30686622-30686641 MsG0280008399.01.T01:CDS 45.0%
GATGCGATTGTTTCGCTTGA+GGG + Chr2:30686896-30686915 MsG0280008399.01.T01:CDS 45.0%
GCTGCATTTGTGGAGACTAA+TGG + Chr2:30690482-30690501 MsG0280008399.01.T01:CDS 45.0%
GGCCAATCAGCAAAATAGGT+CGG - Chr2:30690277-30690296 None:intergenic 45.0%
TAAAGCTTCCTCCATCAGGT+AGG - Chr2:30690757-30690776 None:intergenic 45.0%
TACTGCAACTTGACCAGTGT+GGG + Chr2:30688970-30688989 MsG0280008399.01.T01:CDS 45.0%
TAGAGACGAAGACCCTAAAC+AGG + Chr2:30690249-30690268 MsG0280008399.01.T01:intron 45.0%
TCAGGCAATCAAACTAGCAG+TGG - Chr2:30687976-30687995 None:intergenic 45.0%
TCGCTTGCCAAACTTCTACA+CGG - Chr2:30688201-30688220 None:intergenic 45.0%
TGAAAGCGAGGATGAGGATT+TGG + Chr2:30686628-30686647 MsG0280008399.01.T01:CDS 45.0%
TGATGCGATTGTTTCGCTTG+AGG + Chr2:30686895-30686914 MsG0280008399.01.T01:CDS 45.0%
TGCACAGTATCAGAACCGAA+TGG - Chr2:30686758-30686777 None:intergenic 45.0%
TTAGTGCAGCATCAATGCCA+AGG - Chr2:30689243-30689262 None:intergenic 45.0%
TTCACAAAACCGTTTGGCAC+TGG - Chr2:30686227-30686246 None:intergenic 45.0%
TTGTACCTTGATCACTGCCT+TGG + Chr2:30689223-30689242 MsG0280008399.01.T01:intron 45.0%
! AAACCGTTTGGCACTGGATT+AGG - Chr2:30686221-30686240 None:intergenic 45.0%
! AAAGCGCTTTGATGAGGATC+CGG - Chr2:30691329-30691348 None:intergenic 45.0%
! AATGAGGTTGAAGATTGGCC+TGG + Chr2:30686680-30686699 MsG0280008399.01.T01:CDS 45.0%
! ACTAATTGTGCCAGCACTGA+TGG + Chr2:30689258-30689277 MsG0280008399.01.T01:intron 45.0%
! ACTGCTAGTTTGATTGCCTG+AGG + Chr2:30687975-30687994 MsG0280008399.01.T01:intron 45.0%
! GTTTGGCACTGGATTAGGTT+CGG - Chr2:30686216-30686235 None:intergenic 45.0%
! GTTTTGTGAACTTGCGATCG+GGG + Chr2:30686237-30686256 MsG0280008399.01.T01:CDS 45.0%
! TGCATGGCTTGCAAGTGATA+AGG - Chr2:30690926-30690945 None:intergenic 45.0%
!! ACCTATTTTGCTGATTGGCC+AGG + Chr2:30690277-30690296 MsG0280008399.01.T01:intron 45.0%
!! CCTATTTTGCTGATTGGCCA+GGG + Chr2:30690278-30690297 MsG0280008399.01.T01:intron 45.0%
!! CGGTTTTGTGAACTTGCGAT+CGG + Chr2:30686235-30686254 MsG0280008399.01.T01:CDS 45.0%
!! CTATTTTGCTGATTGGCCAG+GGG + Chr2:30690279-30690298 MsG0280008399.01.T01:intron 45.0%
!! GAGGATTTGGTGCAGGAAAA+TGG + Chr2:30686641-30686660 MsG0280008399.01.T01:CDS 45.0%
!! GATTTGGTGCAGGAAAATGG+AGG + Chr2:30686644-30686663 MsG0280008399.01.T01:CDS 45.0%
!! GGTTTTGTGAACTTGCGATC+GGG + Chr2:30686236-30686255 MsG0280008399.01.T01:CDS 45.0%
!! TTAGAAGTGTTGTCAGTGGC+TGG + Chr2:30689292-30689311 MsG0280008399.01.T01:intron 45.0%
!! TTTTCAAGCTCCATCAGTGC+TGG - Chr2:30689271-30689290 None:intergenic 45.0%
!!! AGGGGGGTGTAGTTTTAGTT+GGG - Chr2:30685995-30686014 None:intergenic 45.0%
AACCAGGGCGGATCTTAGTT+AGG - Chr2:30688116-30688135 None:intergenic 50.0%
AACTAGCAGTGGTGGTTCAG+CGG - Chr2:30687965-30687984 None:intergenic 50.0%
AATAACGCGAGAGAGGAACG+CGG + Chr2:30686530-30686549 MsG0280008399.01.T01:CDS 50.0%
ACGCGGTGTGAGAAGGAATA+TGG + Chr2:30686547-30686566 MsG0280008399.01.T01:CDS 50.0%
ACTGGATCTGCGAGTTTGAG+TGG - Chr2:30691262-30691281 None:intergenic 50.0%
AGAAAGGGAAGGAGATTCGG+TGG - Chr2:30686051-30686070 None:intergenic 50.0%
AGATTGCTCGTGGTTGTCTG+AGG + Chr2:30687033-30687052 MsG0280008399.01.T01:CDS 50.0%
AGCCTATGCCTCAAACCATC+CGG - Chr2:30686926-30686945 None:intergenic 50.0%
AGGAGCGGAGGAAGAAGAAA+GGG - Chr2:30686066-30686085 None:intergenic 50.0%
AGGTCGTGTGATAACCAACC+TGG - Chr2:30690906-30690925 None:intergenic 50.0%
ATCGCAGTTGAAAACGGACC+AGG - Chr2:30686701-30686720 None:intergenic 50.0%
CAATGCCAAGGCAGTGATCA+AGG - Chr2:30689231-30689250 None:intergenic 50.0%
CAGAGTCTGCGACTGCAATT+CGG - Chr2:30687258-30687277 None:intergenic 50.0%
CCCTGGCCAATCAGCAAAAT+AGG - Chr2:30690281-30690300 None:intergenic 50.0%
GGCAATCAAACTAGCAGTGG+TGG - Chr2:30687973-30687992 None:intergenic 50.0%
GTACTGCAACTTGACCAGTG+TGG + Chr2:30688969-30688988 MsG0280008399.01.T01:CDS 50.0%
GTGGAAGTCCAACGGAGATT+CGG + Chr2:30687005-30687024 MsG0280008399.01.T01:CDS 50.0%
GTTGTTGCCGAACATTGTCC+TGG + Chr2:30689752-30689771 MsG0280008399.01.T01:CDS 50.0%
TAGCTTCCTTACCTTGGCAG+TGG + Chr2:30688417-30688436 MsG0280008399.01.T01:intron 50.0%
TCTCTAACCCGAATCTCCGT+TGG - Chr2:30687016-30687035 None:intergenic 50.0%
TGGAAGTCCAACGGAGATTC+GGG + Chr2:30687006-30687025 MsG0280008399.01.T01:CDS 50.0%
TTAGCTCCACTGCCAAGGTA+AGG - Chr2:30688426-30688445 None:intergenic 50.0%
! AGGGGGTGTATGGGTTTAGA+GGG - Chr2:30686014-30686033 None:intergenic 50.0%
! TTCGGGTTAGAGATTGCTCG+TGG + Chr2:30687023-30687042 MsG0280008399.01.T01:CDS 50.0%
!! AGGAGATTCGGTGGTTTGAG+TGG - Chr2:30686042-30686061 None:intergenic 50.0%
!! CTAAGATCCGCCCTGGTTTT+AGG + Chr2:30688118-30688137 MsG0280008399.01.T01:intron 50.0%
!! GGAGATTCGGTGGTTTGAGT+GGG - Chr2:30686041-30686060 None:intergenic 50.0%
!!! CTCTTTTAGCTCCACTGCCA+AGG - Chr2:30688431-30688450 None:intergenic 50.0%
!!! GAGGGGGGTGTAGTTTTAGT+TGG - Chr2:30685996-30686015 None:intergenic 50.0%
!!! GGGGGGTGTAGTTTTAGTTG+GGG - Chr2:30685994-30686013 None:intergenic 50.0%
!!! GGGGGTGTAGTTTTAGTTGG+GGG - Chr2:30685993-30686012 None:intergenic 50.0%
AGCTTCCTCCATCAGGTAGG+TGG - Chr2:30690754-30690773 None:intergenic 55.0%
ATATCGCAGCCTAGTGGTCC+TGG - Chr2:30687933-30687952 None:intergenic 55.0%
GACTTGATCCCAGGACCACT+AGG + Chr2:30687921-30687940 MsG0280008399.01.T01:intron 55.0%
GAGGAGCGGAGGAAGAAGAA+AGG - Chr2:30686067-30686086 None:intergenic 55.0%
GCGGAGGAAGAAGAAAGGGA+AGG - Chr2:30686062-30686081 None:intergenic 55.0%
GGGGTGTATGGGTTTAGAGG+GGG - Chr2:30686012-30686031 None:intergenic 55.0%
GGGTGTATGGGTTTAGAGGG+GGG - Chr2:30686011-30686030 None:intergenic 55.0%
GGTGGTTTGAGTGGGAGTGA+GGG - Chr2:30686033-30686052 None:intergenic 55.0%
GTCCTAACTAAGATCCGCCC+TGG + Chr2:30688111-30688130 MsG0280008399.01.T01:intron 55.0%
GTGGTTTGAGTGGGAGTGAG+GGG - Chr2:30686032-30686051 None:intergenic 55.0%
GTTCGGAATCCGAAGCGGTT+AGG - Chr2:30686199-30686218 None:intergenic 55.0%
TATCCCTCAGTGGTGCATGC+CGG + Chr2:30689066-30689085 MsG0280008399.01.T01:CDS 55.0%
TATCGCAGCCTAGTGGTCCT+GGG - Chr2:30687932-30687951 None:intergenic 55.0%
TGGTTTGAGTGGGAGTGAGG+GGG - Chr2:30686031-30686050 None:intergenic 55.0%
! AACCCTAGCGGTGGTTGGTT+CGG - Chr2:30686141-30686160 None:intergenic 55.0%
! CAGATGTGAGAAGGGAGCAC+TGG - Chr2:30689157-30689176 None:intergenic 55.0%
! GAGGGGGTGTATGGGTTTAG+AGG - Chr2:30686015-30686034 None:intergenic 55.0%
! GGGGGTGTATGGGTTTAGAG+GGG - Chr2:30686013-30686032 None:intergenic 55.0%
! GTGGTTCGGAGTTAGCGAGA+CGG - Chr2:30686106-30686125 None:intergenic 55.0%
! TCAAGGTGCCACCTACCTGA+TGG + Chr2:30690743-30690762 MsG0280008399.01.T01:intron 55.0%
! TGCCGGATGGTTTGAGGCAT+AGG + Chr2:30686921-30686940 MsG0280008399.01.T01:CDS 55.0%
! TGTTTCGCTTGAGGGTGTGC+CGG + Chr2:30686904-30686923 MsG0280008399.01.T01:CDS 55.0%
!! CGAGGATGAGGATTTGGTGC+AGG + Chr2:30686634-30686653 MsG0280008399.01.T01:CDS 55.0%
!! CTTCGGTTCGGAAACCCTAG+CGG - Chr2:30686153-30686172 None:intergenic 55.0%
!! GGTTGGTTCGGGTGCAGTTA+GGG - Chr2:30686129-30686148 None:intergenic 55.0%
!! GTTGGTTCGGGTGCAGTTAG+GGG - Chr2:30686128-30686147 None:intergenic 55.0%
!! TGAGAAGGGAGCACTGGCTA+AGG - Chr2:30689151-30689170 None:intergenic 55.0%
!! TGGTTGGTTCGGGTGCAGTT+AGG - Chr2:30686130-30686149 None:intergenic 55.0%
!!! GTGCGGTTTTGTTGGCGTAG+TGG + Chr2:30687797-30687816 MsG0280008399.01.T01:intron 55.0%
ACCCGAACCAACCACCGCTA+GGG + Chr2:30686136-30686155 MsG0280008399.01.T01:CDS 60.0%
AGGGTGTGCCGGATGGTTTG+AGG + Chr2:30686915-30686934 MsG0280008399.01.T01:CDS 60.0%
AGTTAGCGAGACGGAGGCTG+CGG - Chr2:30686097-30686116 None:intergenic 60.0%
CGGTGGTTTGAGTGGGAGTG+AGG - Chr2:30686034-30686053 None:intergenic 60.0%
GAGAGGAACGCGGTGTGAGA+AGG + Chr2:30686540-30686559 MsG0280008399.01.T01:CDS 60.0%
GCGCTGTTTGCCGGACTATG+TGG + Chr2:30688992-30689011 MsG0280008399.01.T01:CDS 60.0%
GGGTGCAGTTAGGGGTGGTT+CGG - Chr2:30686120-30686139 None:intergenic 60.0%
GTTCGGAGTTAGCGAGACGG+AGG - Chr2:30686103-30686122 None:intergenic 60.0%
TCGGAAACCCTAGCGGTGGT+TGG - Chr2:30686146-30686165 None:intergenic 60.0%
! ACCCTAGCGGTGGTTGGTTC+GGG - Chr2:30686140-30686159 None:intergenic 60.0%
! AGGTGCCACCTACCTGATGG+AGG + Chr2:30690746-30690765 MsG0280008399.01.T01:intron 60.0%
! AGTGGGAGTGAGGGGGTGTA+TGG - Chr2:30686024-30686043 None:intergenic 60.0%
! GTGGGAGTGAGGGGGTGTAT+GGG - Chr2:30686023-30686042 None:intergenic 60.0%
!! GTGCATGCCGGCTCTCAGAT+GGG + Chr2:30689078-30689097 MsG0280008399.01.T01:CDS 60.0%
!! TGCATGCCGGCTCTCAGATG+GGG + Chr2:30689079-30689098 MsG0280008399.01.T01:CDS 60.0%
AGAGCCGGCATGCACCACTG+AGG - Chr2:30689073-30689092 None:intergenic 65.0%
CACCCGAACCAACCACCGCT+AGG + Chr2:30686135-30686154 MsG0280008399.01.T01:CDS 65.0%
GAGCCGGCATGCACCACTGA+GGG - Chr2:30689072-30689091 None:intergenic 65.0%
GCAACCCCCCATCTGAGAGC+CGG - Chr2:30689088-30689107 None:intergenic 65.0%
GGTTCGGGTGCAGTTAGGGG+TGG - Chr2:30686125-30686144 None:intergenic 65.0%
! CCAGTGTGGGCGCTGTTTGC+CGG + Chr2:30688983-30689002 MsG0280008399.01.T01:CDS 65.0%
! CGGTTCGGAAACCCTAGCGG+TGG - Chr2:30686150-30686169 None:intergenic 65.0%
! TCGCTTGAGGGTGTGCCGGA+TGG + Chr2:30686908-30686927 MsG0280008399.01.T01:CDS 65.0%
!! CATGCCGGCTCTCAGATGGG+GGG + Chr2:30689081-30689100 MsG0280008399.01.T01:CDS 65.0%
!! GCATGCCGGCTCTCAGATGG+GGG + Chr2:30689080-30689099 MsG0280008399.01.T01:CDS 65.0%
!! GGTGCATGCCGGCTCTCAGA+TGG + Chr2:30689077-30689096 MsG0280008399.01.T01:CDS 65.0%
CCGGCAAACAGCGCCCACAC+TGG - Chr2:30688986-30689005 None:intergenic 70.0%
TAGCGAGACGGAGGCTGCGG+CGG - Chr2:30686094-30686113 None:intergenic 70.0%
! AGACGGAGGCTGCGGCGGCG+AGG - Chr2:30686089-30686108 None:intergenic 80.0%
! GCTGCGGCGGCGAGGAGGAG+CGG - Chr2:30686081-30686100 None:intergenic 80.0%
! CGGAGGCTGCGGCGGCGAGG+AGG - Chr2:30686086-30686105 None:intergenic 85.0%
! GCGGCGGCGAGGAGGAGCGG+AGG - Chr2:30686078-30686097 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr2 gene 30685984 30691385 30685984 ID=MsG0280008399.01;Name=MsG0280008399.01
Chr2 mRNA 30685984 30691385 30685984 ID=MsG0280008399.01.T01;Parent=MsG0280008399.01;Name=MsG0280008399.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|6|0|598
Chr2 exon 30685984 30687102 30685984 ID=MsG0280008399.01.T01:exon:5877;Parent=MsG0280008399.01.T01
Chr2 exon 30688969 30689102 30688969 ID=MsG0280008399.01.T01:exon:5878;Parent=MsG0280008399.01.T01
Chr2 exon 30689727 30689888 30689727 ID=MsG0280008399.01.T01:exon:5879;Parent=MsG0280008399.01.T01
Chr2 exon 30690469 30690544 30690469 ID=MsG0280008399.01.T01:exon:5880;Parent=MsG0280008399.01.T01
Chr2 exon 30690907 30691062 30690907 ID=MsG0280008399.01.T01:exon:5881;Parent=MsG0280008399.01.T01
Chr2 exon 30691236 30691385 30691236 ID=MsG0280008399.01.T01:exon:5882;Parent=MsG0280008399.01.T01
Chr2 CDS 30685984 30687102 30685984 ID=MsG0280008399.01.T01:cds;Parent=MsG0280008399.01.T01
Chr2 CDS 30688969 30689102 30688969 ID=MsG0280008399.01.T01:cds;Parent=MsG0280008399.01.T01
Chr2 CDS 30689727 30689888 30689727 ID=MsG0280008399.01.T01:cds;Parent=MsG0280008399.01.T01
Chr2 CDS 30690469 30690544 30690469 ID=MsG0280008399.01.T01:cds;Parent=MsG0280008399.01.T01
Chr2 CDS 30690907 30691062 30690907 ID=MsG0280008399.01.T01:cds;Parent=MsG0280008399.01.T01
Chr2 CDS 30691236 30691385 30691236 ID=MsG0280008399.01.T01:cds;Parent=MsG0280008399.01.T01
Gene Sequence

>MsG0280008399.01.T01

ATGTCTCCCCCAACTAAAACTACACCCCCCTCTAAACCCATACACCCCCTCACTCCCACTCAAACCACCGAATCTCCTTCCCTTTCTTCTTCCTCCGCTCCTCCTCGCCGCCGCAGCCTCCGTCTCGCTAACTCCGAACCACCCCTAACTGCACCCGAACCAACCACCGCTAGGGTTTCCGAACCGAAGAAACAGAAGATGGATAAATCAAACCTAACCGCTTCGGATTCCGAACCTAATCCAGTGCCAAACGGTTTTGTGAACTTGCGATCGGGGAAGAAAATTCTCAAACGTGAAATCGTAATCGATGATGTTGATTCTCAGAACAACACTTCCAAAAGGAACAAAATCGATGAAGGAGAATCTAGTGGAAGAAGAAAACTAACTAGAGAAGAGAAAGGGAAGGAACCTGTTGTTGTTGTTGATGAAAAGGAAAATGAAAATGAAAATAACGAATTCGGTTTGGAATCTGAAGCTGTAGTTGAGAACATTGCGGAAGAGAGAAATGAAGTACCGAATGTTGTAGAACAGGCTAGAAATGCTAATAATAACGCGAGAGAGGAACGCGGTGTGAGAAGGAATATGGAACGATTTCACAATATAGCGAGAGTGAATGCTTCACGTTTCGCACATTTTGTGAATGATGAAAGCGAGGATGAGGATTTGGTGCAGGAAAATGGAGGAGAAGAAGAGAGGAATGAGGTTGAAGATTGGCCTGGTCCGTTTTCAACTGCGATGAAAATCATTAGGGATCGAGAGAAGAAATTTATTCCATTCGGTTCTGATACTGTGCAGAAGAATTTGGTTGATACCATAAAGTGGAAACCGAAAACAGATTCGGAGAAGTTAGGTGGAAAGTTAACTGTTCCGTCGTTGCAAGAGCTTTGTATTAGGATACTTGCTAAGAATGTTGATGCGATTGTTTCGCTTGAGGGTGTGCCGGATGGTTTGAGGCATAGGCTTAGTCAGTTGCTGTGTGATTCGAGAAGAATGAATGATCATTTCTTTGAACTTCTTATTGGTGGAAGTCCAACGGAGATTCGGGTTAGAGATTGCTCGTGGTTGTCTGAGGAACATTTTACTAAGTGCTTTAAAGAAAGTGATACTTCTAATTTGGTGGTACTGCAACTTGACCAGTGTGGGCGCTGTTTGCCGGACTATGTGGTAGTTGATACTTTAGCAATGTCACCAAAGCAGTTACCTAATTTAACAAGTCTATCCCTCAGTGGTGCATGCCGGCTCTCAGATGGGGGAAACTTGACTGATGCATCGATCAAAGTTGTTGCCGAACATTGTCCTGGAATATGTCGGCTTGATCTGATGAACGTGTGCAAATTAACAGATTTGTCCATGGGATATCTTACAAACGGTTGTCGTGCACTTAATACACTGAAGCTTTGCCGTAACACATTCAGTGATGAAGCAATTGCTGCATTTGTGGAGACTAATGGAGAGTCCTTGATAGAGTTATCGCTTAATAACGTCAAAAAGGTTGGTTATCACACGACCTTATCACTTGCAAGCCATGCAAAAAAATTGCACAGTCTAGATGTATCTTGGTGCCGAACTTTGACCGACAATGCAATGGGTTTGATAGTGGATAGTTGCTTGTCTCTTCGATTACTTAAACTCTTTGGATGCACTCAGTTAACAGATGTTTTTCTGAAGGGCCACTCAAACTCGCAGATCCAGTTAATTGGTATAAAAATGACTTCTGTTTTGCAACATGTCAAAGTGCCGGATCCTCATCAAAGCGCTTTGAATTATTCGTCAGTCTCTGTTGATTTGGCTCCGTAG
Protein sequence

>MsG0280008399.01.T01

MSPPTKTTPPSKPIHPLTPTQTTESPSLSSSSAPPRRRSLRLANSEPPLTAPEPTTARVSEPKKQKMDKSNLTASDSEPNPVPNGFVNLRSGKKILKREIVIDDVDSQNNTSKRNKIDEGESSGRRKLTREEKGKEPVVVVDEKENENENNEFGLESEAVVENIAEERNEVPNVVEQARNANNNAREERGVRRNMERFHNIARVNASRFAHFVNDESEDEDLVQENGGEEERNEVEDWPGPFSTAMKIIRDREKKFIPFGSDTVQKNLVDTIKWKPKTDSEKLGGKLTVPSLQELCIRILAKNVDAIVSLEGVPDGLRHRLSQLLCDSRRMNDHFFELLIGGSPTEIRVRDCSWLSEEHFTKCFKESDTSNLVVLQLDQCGRCLPDYVVVDTLAMSPKQLPNLTSLSLSGACRLSDGGNLTDASIKVVAEHCPGICRLDLMNVCKLTDLSMGYLTNGCRALNTLKLCRNTFSDEAIAAFVETNGESLIELSLNNVKKVGYHTTLSLASHAKKLHSLDVSWCRTLTDNAMGLIVDSCLSLRLLKLFGCTQLTDVFLKGHSNSQIQLIGIKMTSVLQHVKVPDPHQSALNYSSVSVDLAP*