AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009528.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009528.01.T01 MTR_4g087110 70.940 351 101 1 1 350 1 351 0.0 530
MsG0280009528.01.T01 MTR_4g087100 68.376 351 110 1 1 350 1 351 0.0 508
MsG0280009528.01.T01 MTR_4g087120 67.429 350 113 1 1 349 1 350 9.54e-179 499
MsG0280009528.01.T01 MTR_4g087140 67.236 351 113 2 1 349 1 351 1.94e-177 496
MsG0280009528.01.T01 MTR_4g087130 66.954 348 113 2 1 347 1 347 9.89e-162 457
MsG0280009528.01.T01 MTR_1g034060 56.250 352 151 1 1 349 1 352 1.59e-147 420
MsG0280009528.01.T01 MTR_1g034120 55.682 352 153 1 1 349 1 352 4.75e-147 419
MsG0280009528.01.T01 MTR_4g087090 54.494 356 150 3 1 350 1 350 1.55e-133 385
MsG0280009528.01.T01 MTR_1g034140 52.707 351 157 2 1 350 1 343 9.29e-129 372
MsG0280009528.01.T01 MTR_4g015790 38.235 306 166 10 26 325 62 350 8.98e-58 191
MsG0280009528.01.T01 MTR_7g068650 33.234 337 196 8 1 325 23 342 6.40e-55 184
MsG0280009528.01.T01 MTR_1g081840 34.639 332 199 7 4 331 33 350 9.93e-53 179
MsG0280009528.01.T01 MTR_5g082750 34.268 321 187 11 4 317 25 328 9.66e-52 176
MsG0280009528.01.T01 MTR_3g092890 33.025 324 188 8 7 325 18 317 3.30e-51 174
MsG0280009528.01.T01 MTR_8g024120 34.545 330 190 7 1 325 15 323 3.67e-51 174
MsG0280009528.01.T01 MTR_3g070860 35.016 317 182 10 8 317 30 329 1.81e-50 172
MsG0280009528.01.T01 MTR_8g033380 34.259 324 193 7 4 322 33 341 3.09e-50 172
MsG0280009528.01.T01 MTR_7g062580 33.435 329 193 9 3 326 30 337 9.15e-50 171
MsG0280009528.01.T01 MTR_3g063180 31.642 335 201 10 1 326 18 333 1.31e-48 167
MsG0280009528.01.T01 MTR_5g032870 31.804 327 198 9 7 326 18 326 3.47e-48 166
MsG0280009528.01.T01 MTR_1g070120 32.036 334 197 8 4 329 15 326 3.49e-48 166
MsG0280009528.01.T01 MTR_2g437380 31.231 333 207 6 4 330 28 344 4.57e-48 166
MsG0280009528.01.T01 MTR_5g048550 32.317 328 197 10 3 326 23 329 4.90e-48 166
MsG0280009528.01.T01 MTR_7g063730 31.884 345 188 9 3 330 39 353 9.32e-48 165
MsG0280009528.01.T01 MTR_5g005570 36.184 304 159 8 26 325 37 309 3.16e-46 160
MsG0280009528.01.T01 MTR_7g062570 31.875 320 194 8 10 326 39 337 3.76e-46 161
MsG0280009528.01.T01 MTR_6g464620 31.988 322 196 8 8 322 47 352 1.20e-45 160
MsG0280009528.01.T01 MTR_1g102070 31.595 326 204 7 6 326 40 351 1.52e-45 160
MsG0280009528.01.T01 MTR_7g062550 32.219 329 197 9 3 326 35 342 1.65e-45 159
MsG0280009528.01.T01 MTR_8g009110 30.484 351 202 9 10 349 46 365 1.81e-45 159
MsG0280009528.01.T01 MTR_6g015950 32.628 331 185 11 4 324 16 318 2.61e-45 158
MsG0280009528.01.T01 MTR_8g009160 30.211 331 198 8 26 349 60 364 4.19e-45 158
MsG0280009528.01.T01 MTR_8g028435 30.460 348 205 11 10 349 46 364 4.70e-45 158
MsG0280009528.01.T01 MTR_5g032880 32.132 333 187 9 8 326 357 664 9.77e-45 163
MsG0280009528.01.T01 MTR_5g032880 30.571 350 206 9 8 349 19 339 2.37e-43 159
MsG0280009528.01.T01 MTR_8g009080 34.448 299 168 8 26 318 94 370 1.28e-44 158
MsG0280009528.01.T01 MTR_4g117880 30.199 351 212 9 7 349 41 366 1.36e-44 157
MsG0280009528.01.T01 MTR_1g070085 31.722 331 196 8 4 327 14 321 1.47e-44 156
MsG0280009528.01.T01 MTR_1g070085 31.722 331 196 8 4 327 14 321 1.47e-44 156
MsG0280009528.01.T01 MTR_7g062600 31.515 330 199 10 3 326 26 334 1.63e-44 157
MsG0280009528.01.T01 MTR_8g093930 32.372 312 179 7 22 322 43 333 1.79e-44 157
MsG0280009528.01.T01 MTR_3g091350 32.797 311 171 7 23 320 56 341 5.33e-44 155
MsG0280009528.01.T01 MTR_2g069190 30.744 309 184 8 26 327 68 353 7.82e-44 155
MsG0280009528.01.T01 MTR_2g083030 31.562 320 182 10 26 341 37 323 8.57e-44 154
MsG0280009528.01.T01 MTR_8g009090 30.725 345 208 9 10 349 46 364 9.28e-44 155
MsG0280009528.01.T01 MTR_2g102570 32.722 327 179 10 21 336 47 343 1.24e-43 154
MsG0280009528.01.T01 MTR_8g008930 31.232 349 202 12 10 349 46 365 1.46e-43 154
MsG0280009528.01.T01 MTR_1g070135 30.240 334 203 9 4 329 15 326 1.74e-43 153
MsG0280009528.01.T01 MTR_5g022020 29.545 308 192 7 5 306 17 305 4.17e-43 153
MsG0280009528.01.T01 MTR_5g055680 29.412 340 202 12 3 330 23 336 9.03e-43 152
MsG0280009528.01.T01 MTR_1g062110 32.226 301 174 8 26 317 66 345 1.08e-42 152
MsG0280009528.01.T01 MTR_8g009170 30.149 335 195 8 26 349 60 366 1.24e-42 152
MsG0280009528.01.T01 MTR_3g058610 30.065 306 195 6 4 306 16 305 1.48e-42 151
MsG0280009528.01.T01 MTR_2g072910 30.938 320 191 9 26 340 51 345 2.51e-42 150
MsG0280009528.01.T01 MTR_7g451860 32.692 312 178 7 18 325 33 316 2.57e-42 150
MsG0280009528.01.T01 MTR_7g047670 32.692 312 178 7 18 325 33 316 2.57e-42 150
MsG0280009528.01.T01 MTR_3g096500 31.464 321 201 7 8 323 49 355 3.61e-42 151
MsG0280009528.01.T01 MTR_1g043760 30.548 347 209 8 8 348 35 355 4.55e-42 150
MsG0280009528.01.T01 MTR_7g102820 29.086 361 211 9 1 338 35 373 4.99e-42 150
MsG0280009528.01.T01 MTR_3g117420 32.550 298 178 9 26 319 52 330 5.25e-42 150
MsG0280009528.01.T01 MTR_0009s0050 30.267 337 203 11 3 330 23 336 6.34e-42 149
MsG0280009528.01.T01 MTR_0009s0050 30.383 339 200 12 3 330 23 336 6.79e-42 149
MsG0280009528.01.T01 MTR_8g062600 32.381 315 172 9 26 326 67 354 8.69e-42 150
MsG0280009528.01.T01 MTR_5g059140 31.366 322 186 10 4 314 18 315 9.02e-42 149
MsG0280009528.01.T01 MTR_2g072890 33.446 296 175 9 26 318 52 328 9.29e-42 149
MsG0280009528.01.T01 MTR_4g074130 32.890 301 175 7 26 325 40 314 9.85e-42 149
MsG0280009528.01.T01 MTR_3g088745 31.737 334 206 8 4 331 16 333 9.91e-42 149
MsG0280009528.01.T01 MTR_5g011250 30.792 341 203 12 1 326 16 338 1.18e-41 149
MsG0280009528.01.T01 MTR_2g069210 32.226 301 172 9 26 318 64 340 1.24e-41 149
MsG0280009528.01.T01 MTR_5g055820 30.000 330 203 12 21 344 42 349 1.48e-41 149
MsG0280009528.01.T01 MTR_2g069010 30.476 315 185 8 26 329 69 360 2.11e-41 149
MsG0280009528.01.T01 MTR_3g091360 33.670 297 171 6 23 314 49 324 2.23e-41 148
MsG0280009528.01.T01 MTR_1g033810 31.788 302 172 7 26 318 47 323 2.43e-41 148
MsG0280009528.01.T01 MTR_2g068840 29.464 336 204 7 3 328 32 344 2.44e-41 148
MsG0280009528.01.T01 MTR_1g043775 32.013 303 178 6 22 318 50 330 3.36e-41 148
MsG0280009528.01.T01 MTR_0009s0480 29.179 329 194 8 1 318 20 320 4.09e-41 147
MsG0280009528.01.T01 MTR_5g055690 30.968 310 189 9 21 326 42 330 4.59e-41 147
MsG0280009528.01.T01 MTR_2g068950 30.284 317 195 4 25 334 62 359 6.58e-41 147
MsG0280009528.01.T01 MTR_8g075830 30.968 310 187 9 4 306 16 305 9.58e-41 147
MsG0280009528.01.T01 MTR_3g072810 32.448 339 200 9 1 333 14 329 9.88e-41 146
MsG0280009528.01.T01 MTR_5g055800 28.869 336 197 11 3 326 23 328 1.09e-40 146
MsG0280009528.01.T01 MTR_2g069090 31.561 301 175 10 26 318 68 345 2.07e-40 146
MsG0280009528.01.T01 MTR_1g093140 29.762 336 194 10 26 349 73 378 2.32e-40 146
MsG0280009528.01.T01 MTR_5g065010 28.165 316 193 9 20 326 33 323 3.56e-40 145
MsG0280009528.01.T01 MTR_8g075890 29.126 309 194 7 4 306 16 305 3.68e-40 145
MsG0280009528.01.T01 MTR_1g043810 31.132 318 190 7 8 318 35 330 4.77e-40 145
MsG0280009528.01.T01 MTR_5g055900 28.483 323 200 10 3 318 23 321 5.51e-40 144
MsG0280009528.01.T01 MTR_2g068960 31.230 317 190 6 26 334 63 359 5.57e-40 145
MsG0280009528.01.T01 MTR_5g048570 31.731 312 184 12 26 330 45 334 7.69e-40 144
MsG0280009528.01.T01 MTR_1g093120 31.034 319 184 9 14 318 47 343 9.48e-40 144
MsG0280009528.01.T01 MTR_5g059130 30.294 340 202 9 4 333 20 334 1.23e-39 143
MsG0280009528.01.T01 MTR_5g048740 28.000 350 212 9 1 338 19 340 1.60e-39 143
MsG0280009528.01.T01 MTR_3g072820 28.994 338 209 9 4 333 18 332 2.02e-39 142
MsG0280009528.01.T01 MTR_1g070185 29.565 345 209 10 8 347 49 364 2.77e-39 143
MsG0280009528.01.T01 MTR_2g019370 31.348 319 175 11 19 322 21 310 3.02e-39 142
MsG0280009528.01.T01 MTR_5g048850 30.405 296 182 7 26 318 47 321 7.02e-39 141
MsG0280009528.01.T01 MTR_7g081710 30.000 330 208 8 1 326 22 332 7.16e-39 141
MsG0280009528.01.T01 MTR_4g116010 33.003 303 175 10 26 323 50 329 9.59e-39 141
MsG0280009528.01.T01 MTR_1g043770 30.372 349 208 9 8 349 35 355 2.32e-38 140
MsG0280009528.01.T01 MTR_2g069300 30.565 301 178 11 26 318 54 331 3.07e-38 140
MsG0280009528.01.T01 MTR_5g048470 28.387 310 192 7 16 317 40 327 3.31e-38 140
MsG0280009528.01.T01 MTR_8g093980 31.722 331 198 11 2 324 36 346 3.53e-38 140
MsG0280009528.01.T01 MTR_8g074050 31.544 298 181 9 26 319 52 330 4.76e-38 139
MsG0280009528.01.T01 MTR_8g041600 28.691 359 221 10 1 349 41 374 5.43e-38 140
MsG0280009528.01.T01 MTR_8g041620 28.696 345 213 9 13 349 55 374 5.90e-38 140
MsG0280009528.01.T01 MTR_2g069020 29.321 324 195 8 17 329 55 355 6.50e-38 139
MsG0280009528.01.T01 MTR_8g009120 29.003 331 191 8 26 349 60 353 8.89e-38 139
MsG0280009528.01.T01 MTR_8g064200 29.195 298 184 8 26 318 52 327 1.08e-37 138
MsG0280009528.01.T01 MTR_8g064200 29.195 298 184 8 26 318 57 332 1.20e-37 138
MsG0280009528.01.T01 MTR_2g069020 29.321 324 195 8 17 329 55 355 1.32e-37 139
MsG0280009528.01.T01 MTR_3g026150 32.862 283 167 8 54 330 84 349 2.05e-37 138
MsG0280009528.01.T01 MTR_1g093110 30.897 301 177 8 26 318 70 347 2.13e-37 138
MsG0280009528.01.T01 MTR_7g062560 29.377 337 206 9 4 337 38 345 3.14e-37 137
MsG0280009528.01.T01 MTR_3g464530 28.824 340 183 14 14 341 22 314 6.24e-37 135
MsG0280009528.01.T01 MTR_3g088565 31.646 316 172 11 25 326 2 287 7.53e-37 135
MsG0280009528.01.T01 MTR_4g024660 29.260 311 187 7 26 326 67 354 1.83e-36 135
MsG0280009528.01.T01 MTR_1g070080 28.614 332 203 8 4 326 14 320 2.92e-36 134
MsG0280009528.01.T01 MTR_1g086550 30.218 321 186 10 21 325 15 313 3.82e-36 134
MsG0280009528.01.T01 MTR_8g063070 30.464 302 179 9 26 318 67 346 5.64e-36 134
MsG0280009528.01.T01 MTR_8g074070 31.879 298 180 10 26 319 52 330 5.98e-36 134
MsG0280009528.01.T01 MTR_0328s0030 25.634 355 228 9 1 345 19 347 6.38e-36 134
MsG0280009528.01.T01 MTR_8g009150 28.399 331 185 8 26 349 60 345 8.57e-36 133
MsG0280009528.01.T01 MTR_1g048940 28.616 318 211 5 1 318 21 322 1.04e-35 133
MsG0280009528.01.T01 MTR_7g045650 33.203 256 147 8 26 278 60 294 1.81e-35 132
MsG0280009528.01.T01 MTR_7g016090 29.940 334 203 9 4 331 18 326 1.85e-35 132
MsG0280009528.01.T01 MTR_7g056347 28.387 310 190 7 19 318 59 346 1.86e-35 133
MsG0280009528.01.T01 MTR_7g016090 29.940 334 203 9 4 331 16 324 1.89e-35 132
MsG0280009528.01.T01 MTR_2g025120 29.097 299 179 10 27 319 5 276 2.25e-35 131
MsG0280009528.01.T01 MTR_2g437380 36.264 182 113 1 152 330 69 250 2.58e-35 130
MsG0280009528.01.T01 MTR_2g069060 29.464 336 190 11 26 349 49 349 2.96e-35 132
MsG0280009528.01.T01 MTR_8g461330 29.032 310 181 11 26 322 27 310 3.94e-35 131
MsG0280009528.01.T01 MTR_6g088665 31.385 325 185 11 42 345 29 336 5.31e-35 131
MsG0280009528.01.T01 MTR_7g029655 29.755 326 189 10 8 318 43 343 7.73e-35 131
MsG0280009528.01.T01 MTR_2g083000 29.167 312 188 7 17 325 24 305 1.36e-34 129
MsG0280009528.01.T01 MTR_1g070100 33.173 208 133 3 141 348 55 256 1.58e-34 127
MsG0280009528.01.T01 MTR_5g085330 29.643 280 173 5 45 320 19 278 4.56e-34 128
MsG0280009528.01.T01 MTR_7g016080 29.204 339 193 12 4 331 16 318 4.60e-34 128
MsG0280009528.01.T01 MTR_1g070085 33.690 187 122 1 141 327 59 243 5.53e-34 126
MsG0280009528.01.T01 MTR_6g088665 31.132 318 194 10 42 345 29 335 1.17e-33 127
MsG0280009528.01.T01 MTR_4g100600 32.515 326 177 11 21 329 4 303 1.48e-33 126
MsG0280009528.01.T01 MTR_1g032250 30.488 328 194 8 26 348 73 371 2.64e-33 127
MsG0280009528.01.T01 MTR_7g105070 30.887 327 186 9 8 321 39 338 4.79e-33 126
MsG0280009528.01.T01 MTR_0032s0040 30.183 328 188 12 8 318 43 346 9.49e-33 125
MsG0280009528.01.T01 MTR_7g077670 28.025 314 194 7 26 332 11 299 1.31e-32 124
MsG0280009528.01.T01 MTR_1g070135 30.970 268 158 8 4 266 15 260 1.31e-32 123
MsG0280009528.01.T01 MTR_4g123020 28.696 345 185 13 26 350 20 323 1.68e-32 124
MsG0280009528.01.T01 MTR_4g093840 29.429 333 193 10 26 344 62 366 2.83e-32 124
MsG0280009528.01.T01 MTR_8g102600 31.494 308 173 11 44 329 22 313 3.04e-32 123
MsG0280009528.01.T01 MTR_2g068800 30.662 287 153 9 1 280 30 277 6.43e-32 121
MsG0280009528.01.T01 MTR_3g117485 29.195 298 189 11 26 318 49 329 7.22e-32 122
MsG0280009528.01.T01 MTR_8g009080 33.333 249 141 7 26 271 94 320 7.72e-32 122
MsG0280009528.01.T01 MTR_0056s0160 34.807 181 109 5 142 317 29 205 7.76e-32 120
MsG0280009528.01.T01 MTR_2g033270 30.868 311 173 13 26 325 19 298 9.67e-32 122
MsG0280009528.01.T01 MTR_2g070870 27.059 340 206 13 19 350 21 326 1.00e-31 122
MsG0280009528.01.T01 MTR_1g011580 29.197 274 165 7 22 292 59 306 1.35e-31 122
MsG0280009528.01.T01 MTR_4g096840 30.556 324 186 13 24 337 27 321 1.79e-31 121
MsG0280009528.01.T01 MTR_4g100590 30.675 326 188 11 21 334 4 303 2.31e-31 120
MsG0280009528.01.T01 MTR_3g083370 29.259 270 167 5 48 313 21 270 2.64e-31 120
MsG0280009528.01.T01 MTR_3g040410 30.952 336 192 13 26 349 6 313 2.89e-31 120
MsG0280009528.01.T01 MTR_8g030880 28.349 321 185 10 26 332 10 299 3.16e-31 120
MsG0280009528.01.T01 MTR_1g032140 29.503 322 197 7 26 342 66 362 4.11e-31 121
MsG0280009528.01.T01 MTR_1g062110 30.677 251 144 8 26 267 66 295 4.67e-31 120
MsG0280009528.01.T01 MTR_8g074070 31.544 298 162 12 26 319 52 311 9.06e-31 119
MsG0280009528.01.T01 MTR_8g041600 29.412 272 165 7 1 266 41 291 1.33e-30 118
MsG0280009528.01.T01 MTR_1g034130 60.000 85 34 0 266 350 2 86 1.42e-30 112
MsG0280009528.01.T01 MTR_8g469400 27.698 278 170 5 59 326 85 341 2.03e-30 119
MsG0280009528.01.T01 MTR_7g056353 30.612 294 171 9 64 348 77 346 2.13e-30 121
MsG0280009528.01.T01 MTR_8g009170 30.242 248 142 5 26 266 60 283 2.92e-30 117
MsG0280009528.01.T01 MTR_0009s0050 31.937 191 122 4 146 330 50 238 2.99e-30 116
MsG0280009528.01.T01 MTR_0009s0050 32.955 176 113 3 146 318 50 223 3.45e-30 116
MsG0280009528.01.T01 MTR_8g009080 33.333 240 135 7 26 262 94 311 4.64e-30 117
MsG0280009528.01.T01 MTR_3g026150 31.641 256 154 7 81 330 6 246 4.77e-30 115
MsG0280009528.01.T01 MTR_3g117485 30.075 266 166 8 58 318 7 257 5.52e-30 116
MsG0280009528.01.T01 MTR_5g055690 31.200 250 147 9 21 266 42 270 7.79e-30 115
MsG0280009528.01.T01 MTR_1g032220 29.022 317 191 8 26 337 73 360 9.11e-30 117
MsG0280009528.01.T01 MTR_0009s0480 28.520 277 159 8 1 266 20 268 1.46e-29 114
MsG0280009528.01.T01 MTR_4g119410 28.013 307 180 7 26 318 67 346 1.58e-29 117
MsG0280009528.01.T01 MTR_7g102720 27.723 303 194 5 51 349 54 335 4.56e-29 115
MsG0280009528.01.T01 MTR_8g006930 28.710 310 189 7 19 318 59 346 1.25e-28 114
MsG0280009528.01.T01 MTR_5g048850 30.328 244 146 7 26 266 47 269 1.31e-28 112
MsG0280009528.01.T01 MTR_3g045230 27.114 343 197 9 21 349 51 354 2.29e-28 113
MsG0280009528.01.T01 MTR_1g043775 31.174 247 145 5 22 265 50 274 3.99e-28 112
MsG0280009528.01.T01 MTR_0009s0050 34.810 158 95 4 179 330 1 156 4.60e-28 108
MsG0280009528.01.T01 MTR_7g078010 28.571 308 179 7 25 318 66 346 5.90e-28 112
MsG0280009528.01.T01 MTR_8g102600 35.567 194 115 6 143 329 73 263 2.72e-27 108
MsG0280009528.01.T01 MTR_1g043810 30.153 262 157 6 8 265 35 274 4.37e-27 109
MsG0280009528.01.T01 MTR_2g072910 30.769 247 149 8 26 269 51 278 6.23e-27 107
MsG0280009528.01.T01 MTR_1g043770 30.000 260 158 5 8 265 35 272 2.55e-26 106
MsG0280009528.01.T01 MTR_2g069060 29.710 276 152 9 4 266 2 248 3.96e-26 105
MsG0280009528.01.T01 MTR_3g464530 27.925 265 145 11 14 266 22 252 8.41e-26 104
MsG0280009528.01.T01 MTR_2g025120 28.455 246 143 10 27 266 5 223 1.69e-25 102
MsG0280009528.01.T01 MTR_3g043900 25.526 333 214 8 21 349 51 353 2.09e-25 105
MsG0280009528.01.T01 MTR_4g115990 29.831 295 167 9 26 318 46 302 3.55e-25 103
MsG0280009528.01.T01 MTR_5g025090 28.076 317 194 10 26 340 5 289 2.44e-24 101
MsG0280009528.01.T01 MTR_3g026150 32.407 216 126 7 54 266 84 282 2.79e-24 100
MsG0280009528.01.T01 MTR_5g025050 28.105 306 189 9 26 329 5 281 3.58e-24 100
MsG0280009528.01.T01 MTR_7g056393 27.362 307 182 9 26 318 67 346 1.07e-23 100
MsG0280009528.01.T01 MTR_5g027230 27.907 301 182 10 26 322 6 275 3.40e-23 98.2
MsG0280009528.01.T01 MTR_8g009180 29.756 205 133 4 149 349 97 294 4.59e-23 97.8
MsG0280009528.01.T01 MTR_4g100590 30.403 273 160 9 74 334 2 256 4.77e-23 97.1
MsG0280009528.01.T01 MTR_0009s0400 35.294 119 74 2 201 318 1 117 1.93e-22 92.4
MsG0280009528.01.T01 MTR_6g092620 26.623 308 174 11 25 317 2 272 9.27e-22 94.4
MsG0280009528.01.T01 MTR_3g083370 27.803 223 137 5 48 266 21 223 1.27e-21 92.4
MsG0280009528.01.T01 MTR_4g011690 25.574 305 194 9 26 321 9 289 1.05e-20 91.7
MsG0280009528.01.T01 MTR_1g043840 32.787 183 114 3 158 333 51 231 1.97e-20 91.3
MsG0280009528.01.T01 MTR_7g078010 28.980 245 149 6 25 266 66 288 6.33e-20 89.0
MsG0280009528.01.T01 MTR_4g094900 30.769 221 128 10 26 232 8 217 6.77e-20 88.2
MsG0280009528.01.T01 MTR_5g025060 26.174 298 166 8 26 322 6 250 8.30e-20 88.6
MsG0280009528.01.T01 MTR_4g011720 26.045 311 194 8 26 326 9 293 8.37e-20 89.0
MsG0280009528.01.T01 MTR_5g024940 26.144 306 176 10 26 329 6 263 3.59e-18 84.0
MsG0280009528.01.T01 MTR_1g070110 28.061 196 103 4 141 333 62 222 5.44e-18 82.4
MsG0280009528.01.T01 MTR_4g132770 37.288 118 70 3 196 311 23 138 1.14e-17 79.7
MsG0280009528.01.T01 MTR_4g021380 29.952 207 122 8 133 326 103 299 1.37e-17 82.8
MsG0280009528.01.T01 MTR_1g034100 52.381 63 30 0 288 350 9 71 4.93e-17 75.1
MsG0280009528.01.T01 MTR_4g100600 31.818 242 125 10 21 247 4 220 5.41e-17 79.3
MsG0280009528.01.T01 MTR_3g108520 29.651 172 108 6 162 322 125 294 1.20e-15 77.0
MsG0280009528.01.T01 MTR_7g090520 27.778 162 113 3 159 319 129 287 2.26e-15 76.3
MsG0280009528.01.T01 MTR_6g035160 27.778 162 114 3 166 326 1 160 1.55e-14 71.2
MsG0280009528.01.T01 MTR_4g021360 26.596 188 129 6 149 329 114 299 3.48e-14 72.8
MsG0280009528.01.T01 MTR_1g032240 36.735 98 50 3 202 298 62 148 1.39e-13 68.6
MsG0280009528.01.T01 MTR_5g031760 50.909 55 27 0 174 228 1 55 3.47e-13 63.9
MsG0280009528.01.T01 MTR_8g093970 50.000 54 27 0 174 227 1 54 1.96e-11 60.8
MsG0280009528.01.T01 MTR_1g011600 27.815 151 97 3 162 303 129 276 2.67e-11 63.9
MsG0280009528.01.T01 MTR_3g040440 43.056 72 39 1 214 285 15 84 4.21e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009528.01.T01 AT3G19000 51.412 354 163 2 1 348 1 351 8.49e-124 360
MsG0280009528.01.T01 AT3G19010 49.003 351 173 2 1 349 1 347 2.18e-121 354
MsG0280009528.01.T01 AT3G19010 49.003 351 173 2 1 349 1 347 2.18e-121 354
MsG0280009528.01.T01 AT3G19010 44.160 351 160 3 1 349 1 317 9.80e-102 303
MsG0280009528.01.T01 AT3G19000 49.265 272 129 2 1 266 1 269 3.73e-92 277
MsG0280009528.01.T01 AT3G19010 48.507 268 132 2 1 266 1 264 5.13e-87 265
MsG0280009528.01.T01 AT2G38240 35.652 345 189 10 4 337 23 345 3.59e-58 192
MsG0280009528.01.T01 AT4G25420 34.043 329 199 7 2 326 38 352 3.22e-56 187
MsG0280009528.01.T01 AT5G05600 33.735 332 196 9 1 325 35 349 1.26e-55 186
MsG0280009528.01.T01 AT4G10490 33.333 330 192 9 4 326 18 326 1.69e-54 182
MsG0280009528.01.T01 AT4G10500 34.462 325 182 10 4 320 20 321 2.79e-54 182
MsG0280009528.01.T01 AT3G21420 35.082 305 176 5 26 325 55 342 6.66e-54 181
MsG0280009528.01.T01 AT3G11180 35.258 329 181 10 8 325 71 378 9.40e-54 182
MsG0280009528.01.T01 AT3G11180 35.258 329 181 10 8 325 71 378 1.10e-53 182
MsG0280009528.01.T01 AT3G55970 33.333 336 197 10 1 325 22 341 1.80e-53 180
MsG0280009528.01.T01 AT5G51810 33.739 329 196 8 2 326 40 350 1.15e-49 171
MsG0280009528.01.T01 AT5G07200 33.435 329 193 7 8 326 41 353 4.34e-49 169
MsG0280009528.01.T01 AT1G60980 34.056 323 196 9 8 326 40 349 2.82e-48 167
MsG0280009528.01.T01 AT1G55290 32.492 317 178 8 8 314 41 331 4.64e-46 160
MsG0280009528.01.T01 AT5G24530 31.611 329 189 9 7 325 18 320 7.58e-46 159
MsG0280009528.01.T01 AT4G16330 31.210 314 176 8 22 326 63 345 1.93e-45 159
MsG0280009528.01.T01 AT1G78550 31.104 299 184 7 26 321 53 332 2.67e-45 159
MsG0280009528.01.T01 AT4G21200 34.028 288 159 8 17 298 30 292 4.20e-45 157
MsG0280009528.01.T01 AT1G15550 31.897 348 197 11 11 335 17 347 3.20e-44 156
MsG0280009528.01.T01 AT5G08640 32.544 338 189 9 8 333 23 333 3.78e-44 155
MsG0280009528.01.T01 AT5G08640 32.544 338 189 9 8 333 23 333 3.78e-44 155
MsG0280009528.01.T01 AT1G03400 29.582 311 188 8 46 349 65 351 1.04e-43 154
MsG0280009528.01.T01 AT1G17020 31.667 300 177 8 26 318 53 331 3.70e-43 153
MsG0280009528.01.T01 AT1G17010 30.488 328 201 9 26 349 54 358 5.08e-43 152
MsG0280009528.01.T01 AT1G77330 33.028 327 174 11 25 337 2 297 5.98e-43 151
MsG0280009528.01.T01 AT1G04350 29.558 362 211 11 1 349 30 360 1.57e-42 151
MsG0280009528.01.T01 AT1G80330 32.923 325 178 11 24 336 47 343 1.63e-42 151
MsG0280009528.01.T01 AT3G13610 30.000 350 207 10 8 349 42 361 1.92e-42 151
MsG0280009528.01.T01 AT5G59530 29.909 331 201 7 26 349 58 364 1.99e-42 151
MsG0280009528.01.T01 AT1G03410 30.573 314 184 9 45 349 73 361 2.72e-42 150
MsG0280009528.01.T01 AT4G25420 33.457 269 161 7 2 266 38 292 3.58e-42 149
MsG0280009528.01.T01 AT4G25300 33.088 272 155 8 26 291 52 302 5.81e-42 150
MsG0280009528.01.T01 AT1G03410 30.159 315 184 9 45 349 110 398 9.38e-42 150
MsG0280009528.01.T01 AT5G43440 30.841 321 190 8 26 338 62 358 3.61e-41 148
MsG0280009528.01.T01 AT2G36690 32.827 329 187 13 1 317 29 335 4.22e-41 148
MsG0280009528.01.T01 AT2G36690 32.827 329 187 13 1 317 29 335 4.22e-41 148
MsG0280009528.01.T01 AT3G51240 29.355 310 194 7 3 306 14 304 9.70e-41 147
MsG0280009528.01.T01 AT3G60290 31.034 348 211 11 4 343 27 353 1.78e-40 146
MsG0280009528.01.T01 AT4G25310 33.829 269 156 8 54 318 76 326 2.26e-40 145
MsG0280009528.01.T01 AT5G59540 29.393 313 188 8 15 318 51 339 2.67e-40 145
MsG0280009528.01.T01 AT4G22880 30.323 310 195 8 26 329 47 341 4.14e-40 145
MsG0280009528.01.T01 AT4G22880 30.323 310 195 8 26 329 47 341 4.14e-40 145
MsG0280009528.01.T01 AT4G22880 30.323 310 195 8 26 329 47 341 4.14e-40 145
MsG0280009528.01.T01 AT1G06620 32.781 302 169 10 26 318 62 338 1.36e-39 144
MsG0280009528.01.T01 AT1G44090 32.459 305 186 8 26 324 63 353 1.60e-39 144
MsG0280009528.01.T01 AT5G43450 29.494 356 201 10 1 338 32 355 5.84e-39 142
MsG0280009528.01.T01 AT3G46500 32.441 299 176 10 54 336 37 325 1.54e-38 140
MsG0280009528.01.T01 AT2G44800 31.420 331 199 10 3 326 26 335 1.80e-38 140
MsG0280009528.01.T01 AT1G03400 27.729 339 186 10 46 349 65 379 2.07e-38 141
MsG0280009528.01.T01 AT1G04380 29.762 336 199 9 21 349 40 345 4.94e-38 139
MsG0280009528.01.T01 AT5G05600 33.083 266 154 9 8 266 42 290 6.36e-38 137
MsG0280009528.01.T01 AT1G80340 30.990 313 183 8 26 331 50 336 1.00e-37 138
MsG0280009528.01.T01 AT1G78550 30.943 265 165 6 60 321 5 254 1.17e-37 136
MsG0280009528.01.T01 AT1G50960 29.560 318 191 7 13 325 25 314 1.21e-37 138
MsG0280009528.01.T01 AT5G51810 33.456 272 159 8 2 269 40 293 2.42e-37 136
MsG0280009528.01.T01 AT2G30830 32.384 281 163 8 45 318 71 331 2.82e-37 137
MsG0280009528.01.T01 AT1G78440 30.031 323 185 10 26 337 18 310 4.23e-37 136
MsG0280009528.01.T01 AT1G06650 30.357 336 196 12 24 349 62 369 6.72e-37 137
MsG0280009528.01.T01 AT5G58660 33.670 297 160 9 26 303 34 312 1.06e-36 135
MsG0280009528.01.T01 AT3G12900 29.042 334 207 9 1 328 30 339 1.63e-36 135
MsG0280009528.01.T01 AT3G61400 30.421 309 175 11 26 318 60 344 1.81e-36 135
MsG0280009528.01.T01 AT3G55970 32.130 277 161 10 1 266 22 282 2.79e-36 133
MsG0280009528.01.T01 AT4G21690 29.293 297 177 6 54 335 64 342 6.56e-36 134
MsG0280009528.01.T01 AT5G20400 28.814 295 192 7 26 318 45 323 2.05e-35 132
MsG0280009528.01.T01 AT1G30040 28.615 325 196 12 20 337 25 320 3.53e-35 131
MsG0280009528.01.T01 AT2G30840 29.412 323 186 11 14 318 37 335 6.01e-35 131
MsG0280009528.01.T01 AT4G16330 32.016 253 142 7 83 326 8 239 2.09e-34 127
MsG0280009528.01.T01 AT1G06645 28.228 333 204 12 24 349 75 379 3.75e-34 129
MsG0280009528.01.T01 AT3G50210 27.515 338 211 9 21 334 3 330 4.61e-34 128
MsG0280009528.01.T01 AT3G50210 27.515 338 211 9 21 334 3 330 4.61e-34 128
MsG0280009528.01.T01 AT3G50210 27.515 338 211 9 21 334 3 330 4.61e-34 128
MsG0280009528.01.T01 AT5G63600 28.990 307 190 8 23 326 30 311 1.24e-33 127
MsG0280009528.01.T01 AT1G05010 31.618 272 153 8 48 310 21 268 1.39e-33 127
MsG0280009528.01.T01 AT1G12010 28.289 304 187 8 27 326 8 284 2.23e-33 126
MsG0280009528.01.T01 AT3G49630 27.964 329 207 10 26 335 9 326 3.68e-33 125
MsG0280009528.01.T01 AT5G63600 28.431 306 192 7 23 326 30 310 1.17e-32 124
MsG0280009528.01.T01 AT3G46490 30.000 320 207 9 26 333 9 323 1.71e-32 124
MsG0280009528.01.T01 AT1G47990 28.527 319 175 9 26 325 15 299 3.13e-32 123
MsG0280009528.01.T01 AT1G49390 28.620 297 190 8 26 318 45 323 4.49e-32 123
MsG0280009528.01.T01 AT5G63590 31.333 300 180 10 26 320 14 292 4.52e-32 122
MsG0280009528.01.T01 AT3G49620 28.267 329 204 12 26 334 34 350 7.11e-32 123
MsG0280009528.01.T01 AT1G62380 27.632 304 189 8 27 326 8 284 1.31e-31 121
MsG0280009528.01.T01 AT1G02400 30.000 290 175 9 47 325 37 309 1.71e-31 121
MsG0280009528.01.T01 AT3G49630 27.301 326 207 10 29 335 8 322 2.48e-31 120
MsG0280009528.01.T01 AT1G06640 30.097 309 174 11 24 318 62 342 4.37e-31 121
MsG0280009528.01.T01 AT5G20550 28.339 307 201 9 26 329 45 335 5.12e-31 120
MsG0280009528.01.T01 AT3G46500 31.325 249 151 9 54 292 37 275 6.02e-31 119
MsG0280009528.01.T01 AT5G54000 28.136 295 194 8 26 318 46 324 7.86e-31 120
MsG0280009528.01.T01 AT2G25450 27.714 350 212 11 14 349 37 359 1.26e-30 119
MsG0280009528.01.T01 AT3G46490 31.126 302 188 11 26 313 9 304 1.32e-30 118
MsG0280009528.01.T01 AT2G30840 28.793 323 182 12 14 318 37 329 1.59e-30 119
MsG0280009528.01.T01 AT5G12270 27.829 327 209 8 6 326 35 340 1.61e-30 119
MsG0280009528.01.T01 AT2G34555 29.560 318 189 12 26 337 27 315 3.62e-30 118
MsG0280009528.01.T01 AT3G51240 31.443 194 120 3 113 306 40 220 4.82e-30 116
MsG0280009528.01.T01 AT5G58660 33.591 259 136 8 26 266 34 274 5.05e-30 116
MsG0280009528.01.T01 AT4G25300 41.007 139 78 3 155 291 72 208 1.27e-29 114
MsG0280009528.01.T01 AT3G46500 33.493 209 124 6 140 336 46 251 1.39e-29 114
MsG0280009528.01.T01 AT3G46500 33.493 209 124 6 140 336 46 251 1.39e-29 114
MsG0280009528.01.T01 AT4G25310 29.630 270 144 7 54 321 76 301 2.74e-28 112
MsG0280009528.01.T01 AT3G46500 34.211 190 112 5 159 336 1 189 3.84e-28 108
MsG0280009528.01.T01 AT1G06620 32.389 247 136 9 26 266 62 283 4.70e-28 111
MsG0280009528.01.T01 AT3G47190 29.965 287 157 13 54 324 48 306 8.39e-28 111
MsG0280009528.01.T01 AT5G07480 27.812 320 209 8 4 318 24 326 8.41e-28 112
MsG0280009528.01.T01 AT5G51310 28.395 324 190 10 26 332 5 303 8.72e-28 111
MsG0280009528.01.T01 AT5G43440 30.400 250 147 6 26 271 62 288 1.24e-27 110
MsG0280009528.01.T01 AT4G23340 27.986 293 173 9 54 332 30 298 2.44e-27 110
MsG0280009528.01.T01 AT5G59540 27.519 258 157 7 15 266 51 284 2.96e-27 108
MsG0280009528.01.T01 AT5G43935 28.797 316 171 9 23 329 16 286 5.09e-27 108
MsG0280009528.01.T01 AT1G35190 30.671 313 191 10 48 346 26 326 3.85e-26 107
MsG0280009528.01.T01 AT5G43450 28.571 287 158 9 1 272 32 286 4.63e-26 105
MsG0280009528.01.T01 AT3G61400 29.032 248 150 8 26 266 60 288 6.15e-26 105
MsG0280009528.01.T01 AT5G54000 27.132 258 169 6 65 318 2 244 1.64e-25 103
MsG0280009528.01.T01 AT4G16765 35.052 194 116 5 143 329 49 239 3.90e-25 102
MsG0280009528.01.T01 AT4G16765 35.052 194 116 5 143 329 49 239 3.90e-25 102
MsG0280009528.01.T01 AT4G16765 35.052 194 116 5 143 329 49 239 3.90e-25 102
MsG0280009528.01.T01 AT1G49390 27.907 258 167 7 65 318 2 244 4.45e-25 102
MsG0280009528.01.T01 AT1G04380 29.365 252 148 7 21 268 40 265 4.92e-25 102
MsG0280009528.01.T01 AT5G63580 29.839 248 147 6 23 266 16 240 7.61e-25 101
MsG0280009528.01.T01 AT1G06650 30.081 246 146 7 24 265 62 285 1.08e-24 102
MsG0280009528.01.T01 AT2G19590 28.197 305 170 11 26 318 11 278 1.47e-24 102
MsG0280009528.01.T01 AT1G35190 28.939 311 176 10 48 346 26 303 1.75e-24 102
MsG0280009528.01.T01 AT5G63580 29.675 246 146 6 23 264 16 238 2.96e-24 100
MsG0280009528.01.T01 AT4G16765 36.264 182 106 5 143 317 49 227 4.20e-24 99.4
MsG0280009528.01.T01 AT5G63595 26.316 304 174 9 9 301 3 267 1.08e-23 99.4
MsG0280009528.01.T01 AT1G30040 28.740 254 149 11 20 266 25 253 4.07e-23 97.4
MsG0280009528.01.T01 AT2G30840 26.966 267 156 8 14 265 37 279 1.10e-22 97.1
MsG0280009528.01.T01 AT3G49630 30.000 190 125 4 152 335 66 253 1.47e-22 95.5
MsG0280009528.01.T01 AT1G14130 27.852 298 186 7 26 321 9 279 1.48e-22 96.7
MsG0280009528.01.T01 AT3G46500 30.435 184 113 6 115 292 27 201 5.06e-22 93.2
MsG0280009528.01.T01 AT3G50210 29.381 194 125 4 152 334 56 248 1.03e-21 93.2
MsG0280009528.01.T01 AT1G52800 26.349 315 191 9 19 321 3 288 1.93e-21 93.6
MsG0280009528.01.T01 AT3G46500 30.288 208 108 6 140 336 46 227 7.73e-21 90.1
MsG0280009528.01.T01 AT1G06640 28.906 256 150 8 24 272 62 292 1.62e-20 91.3
MsG0280009528.01.T01 AT5G07480 31.977 172 111 3 152 318 47 217 5.58e-20 88.2
MsG0280009528.01.T01 AT3G46500 32.857 140 87 4 159 292 32 170 6.63e-20 86.7
MsG0280009528.01.T01 AT3G46500 32.857 140 87 4 159 292 32 170 6.63e-20 86.7
MsG0280009528.01.T01 AT3G46480 29.577 284 145 10 80 345 37 283 7.63e-20 88.6
MsG0280009528.01.T01 AT2G19590 28.727 275 152 10 56 318 21 263 1.08e-19 88.6
MsG0280009528.01.T01 AT1G06640 28.514 249 148 7 24 266 62 286 1.19e-19 88.2
MsG0280009528.01.T01 AT4G23340 29.348 184 116 5 159 332 1 180 1.26e-19 86.3
MsG0280009528.01.T01 AT1G14120 25.817 306 199 7 20 323 1 280 5.91e-19 86.7
MsG0280009528.01.T01 AT1G14120 25.817 306 199 7 20 323 1 280 5.91e-19 86.7
MsG0280009528.01.T01 AT1G14120 25.817 306 199 7 20 323 1 280 5.91e-19 86.7
MsG0280009528.01.T01 AT1G02400 28.455 246 149 8 47 282 37 265 8.88e-19 85.1
MsG0280009528.01.T01 AT3G46500 29.697 165 102 5 115 273 27 183 7.51e-18 80.9
MsG0280009528.01.T01 AT4G16765 37.288 118 70 2 215 329 77 193 1.24e-16 77.8
MsG0280009528.01.T01 AT1G52820 23.232 297 210 9 26 321 12 291 1.26e-16 80.1
MsG0280009528.01.T01 AT1G80320 27.094 203 139 5 149 345 116 315 1.26e-16 80.1
MsG0280009528.01.T01 AT4G16770 29.825 228 135 8 26 245 22 232 8.36e-16 76.6
MsG0280009528.01.T01 AT4G16765 34.058 138 82 4 143 273 49 184 1.69e-14 71.6
MsG0280009528.01.T01 AT4G03070 24.024 333 211 11 4 326 1 301 3.36e-14 72.8
MsG0280009528.01.T01 AT4G22870 36.471 85 53 1 243 326 10 94 2.87e-13 65.9
MsG0280009528.01.T01 AT1G52790 26.471 170 118 4 154 321 120 284 3.08e-13 70.1
MsG0280009528.01.T01 AT4G22870 37.349 83 51 1 245 326 53 135 7.52e-13 65.9
MsG0280009528.01.T01 AT1G15540 22.830 311 205 9 22 321 8 294 6.73e-11 63.2
MsG0280009528.01.T01 AT1G15540 22.830 311 205 9 22 321 5 291 7.06e-11 63.2
MsG0280009528.01.T01 AT1G15540 22.830 311 205 9 22 321 5 291 7.06e-11 63.2
MsG0280009528.01.T01 AT1G15540 22.830 311 205 9 22 321 12 298 7.55e-11 63.2

Find 107 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGTTTACTTTCTATTTA+TGG 0.081013 2:-53750687 None:intergenic
TGAAACAATTACCTAAAATT+TGG 0.169045 2:-53751231 None:intergenic
GTCTTGGCCAAGAATATTTA+TGG 0.179071 2:-53752313 None:intergenic
CTGGTGGTTGTTGGAATATT+GGG 0.188082 2:-53750870 None:intergenic
TTTCCAGTCTTTGATATTCT+TGG 0.204695 2:-53751103 None:intergenic
CTATCTTATAGTGATAAATT+TGG 0.242697 2:-53753883 None:intergenic
TCTGGTGGTTGTTGGAATAT+TGG 0.275296 2:-53750871 None:intergenic
CAAAATATAGACCTTTCAAT+TGG 0.314729 2:+53753801 MsG0280009528.01.T01:CDS
GCTTCTGTGATGGAGAAATT+TGG 0.321050 2:-53750820 None:intergenic
ATTGTTCTTTGCTCAAAGTA+TGG 0.321834 2:+53751017 MsG0280009528.01.T01:CDS
AAATTTGGTCTGTGTTCTTC+GGG 0.323812 2:-53750805 None:intergenic
TAAAATTTGGAGGATATAGA+AGG 0.325245 2:-53751218 None:intergenic
GAAATTTGGTCTGTGTTCTT+CGG 0.331399 2:-53750806 None:intergenic
TAACATTGGTGATCTCATTC+AGG 0.331758 2:+53752416 MsG0280009528.01.T01:CDS
ATGGGGTACCTTTGAGTATT+CGG 0.340937 2:+53750971 MsG0280009528.01.T01:CDS
GTCAATTACGGGAACTCCTT+TGG 0.341162 2:-53750842 None:intergenic
ATGTTAACAATGTAAGCATT+TGG 0.341220 2:-53752399 None:intergenic
TGTTAACAATGTAAGCATTT+GGG 0.344715 2:-53752398 None:intergenic
GTTGGCACCATAAATATTCT+TGG 0.352029 2:+53752306 MsG0280009528.01.T01:CDS
GTGGTGACAACTTCGAATTA+TGG 0.353763 2:-53750580 None:intergenic
GAAATAAAATCTATCATGTT+GGG 0.361162 2:+53754067 MsG0280009528.01.T01:three_prime_UTR
CTTGGCCAAGACGAGGTTGC+AGG 0.363203 2:+53752324 MsG0280009528.01.T01:CDS
AAAATATAGACCTTTCAATT+GGG 0.388445 2:+53753802 MsG0280009528.01.T01:CDS
GAACTTATAGCTTTGAGCTT+AGG 0.396485 2:+53752165 MsG0280009528.01.T01:CDS
CCCATGGTTGTTCTAATGCT+AGG 0.399692 2:-53750757 None:intergenic
ACGAGTGACTACAACTGAAT+TGG 0.410959 2:+53753955 MsG0280009528.01.T01:three_prime_UTR
CCTTCCCCTCACCTAGCTCT+TGG 0.419624 2:+53752264 MsG0280009528.01.T01:CDS
TATTGGGGAGAGGTCAATTA+CGG 0.426320 2:-53750854 None:intergenic
CCATGGTTGTTCTAATGCTA+GGG 0.431191 2:-53750756 None:intergenic
ATGGAGGAGAAGAGGAAGGT+TGG 0.434612 2:+53751036 MsG0280009528.01.T01:CDS
TTTGGAGGATATAGAAGGGT+TGG 0.445504 2:-53751213 None:intergenic
AACTCCTTTGGCTTCTGTGA+TGG 0.447426 2:-53750830 None:intergenic
AGCGTAAAATAGATCAAGAA+TGG 0.449486 2:+53752358 MsG0280009528.01.T01:CDS
CCTCACCTAGCTCTTGGTGT+TGG 0.450171 2:+53752270 MsG0280009528.01.T01:CDS
CTACACCAATGTAAAGCCTT+TGG 0.451048 2:+53753751 MsG0280009528.01.T01:CDS
AATCTATCATGTTGGGGAAG+GGG 0.461926 2:+53754074 MsG0280009528.01.T01:three_prime_UTR
TGAAATAAAATCTATCATGT+TGG 0.463860 2:+53754066 MsG0280009528.01.T01:three_prime_UTR
TCTTATAGTGATAAATTTGG+AGG 0.482272 2:-53753880 None:intergenic
AACCTAGTGAAGGAAATTGC+AGG 0.482575 2:+53750910 MsG0280009528.01.T01:CDS
TATTGAAGAGATGGAAAAGT+TGG 0.485176 2:+53752128 MsG0280009528.01.T01:CDS
AACAATTACCTAAAATTTGG+AGG 0.489440 2:-53751228 None:intergenic
ACAATGTAAGCATTTGGGAT+TGG 0.498237 2:-53752393 None:intergenic
TGCAGGTGCATGCAAGGAGT+GGG 0.505336 2:+53750927 MsG0280009528.01.T01:CDS
ATTGGGGAGAGGTCAATTAC+GGG 0.505761 2:-53750853 None:intergenic
AAATATAGACCTTTCAATTG+GGG 0.507294 2:+53753803 MsG0280009528.01.T01:CDS
CAGATGGATCTGGTGGTTGT+TGG 0.508500 2:-53750879 None:intergenic
AAATCTATCATGTTGGGGAA+GGG 0.521463 2:+53754073 MsG0280009528.01.T01:three_prime_UTR
CAAGACCTGCAACCTCGTCT+TGG 0.523101 2:-53752329 None:intergenic
TGGTGGTTGTTGGAATATTG+GGG 0.523117 2:-53750869 None:intergenic
AGTCCAAGTGGTTATCATGA+TGG 0.526871 2:+53751072 MsG0280009528.01.T01:CDS
AATGCTTACATTGTTAACAT+TGG 0.527333 2:+53752402 MsG0280009528.01.T01:CDS
AAAATCTATCATGTTGGGGA+AGG 0.533761 2:+53754072 MsG0280009528.01.T01:three_prime_UTR
CTCAAAGTATGGAGGAGAAG+AGG 0.536685 2:+53751028 MsG0280009528.01.T01:CDS
GGAAATTGCAGGTGCATGCA+AGG 0.538125 2:+53750921 MsG0280009528.01.T01:CDS
GCACGAGTATATTGAAGAGA+TGG 0.539012 2:+53752119 MsG0280009528.01.T01:CDS
ATGATGATCGACTTACTCAA+TGG 0.540360 2:+53751184 MsG0280009528.01.T01:CDS
TTACATTGGTGTAGTGTGAT+GGG 0.545365 2:-53753742 None:intergenic
TAGAACAACCATGGGAGAAG+TGG 0.545383 2:+53750765 MsG0280009528.01.T01:exon
TCACCAAGAATATCAAAGAC+TGG 0.547783 2:+53751100 MsG0280009528.01.T01:CDS
GCGTAAAATAGATCAAGAAT+GGG 0.551367 2:+53752359 MsG0280009528.01.T01:CDS
TTCTTGCAAGTCACAAACCA+TGG 0.552007 2:+53750952 MsG0280009528.01.T01:CDS
CACCAATGTAAAGCCTTTGG+AGG 0.553153 2:+53753754 MsG0280009528.01.T01:CDS
TTTACATTGGTGTAGTGTGA+TGG 0.553629 2:-53753743 None:intergenic
CCAAGAGCTAGGTGAGGGGA+AGG 0.554892 2:-53752264 None:intergenic
CACCTGCAATTTCCTTCACT+AGG 0.560293 2:-53750912 None:intergenic
AAAGTTGGCACATAAACTGC+TGG 0.561160 2:+53752143 MsG0280009528.01.T01:CDS
TGCTATTGAAAACCTAGTGA+AGG 0.565988 2:+53750900 MsG0280009528.01.T01:CDS
AGATGCTTGCCCCAATTGAA+AGG 0.576941 2:-53753812 None:intergenic
TCTTGCAAGTCACAAACCAT+GGG 0.585796 2:+53750953 MsG0280009528.01.T01:CDS
TCAATAGCAGATGGATCTGG+TGG 0.585878 2:-53750886 None:intergenic
AAAATTTGGAGGATATAGAA+GGG 0.586653 2:-53751217 None:intergenic
GTTGTTGGAATATTGGGGAG+AGG 0.587850 2:-53750864 None:intergenic
TTGCAGGTGCATGCAAGGAG+TGG 0.589476 2:+53750926 MsG0280009528.01.T01:CDS
GGTTTGTAAATCAACGTATG+TGG 0.593126 2:-53750735 None:intergenic
AAATAAAATCTATCATGTTG+GGG 0.593471 2:+53754068 MsG0280009528.01.T01:three_prime_UTR
CCCTAGCATTAGAACAACCA+TGG 0.597806 2:+53750756 MsG0280009528.01.T01:exon
CGATAATTACAGGTGGTCAG+TGG 0.598235 2:+53750530 MsG0280009528.01.T01:five_prime_UTR
TGTAAATCAACGTATGTGGA+AGG 0.600888 2:-53750731 None:intergenic
ATCCTCCAAAGGCTTTACAT+TGG 0.602076 2:-53753756 None:intergenic
CAACACCAAGAGCTAGGTGA+GGG 0.602434 2:-53752269 None:intergenic
AGGTGAGGGGAAGGGCATTG+AGG 0.604097 2:-53752255 None:intergenic
GTTCTTTGCTCAAAGTATGG+AGG 0.604774 2:+53751020 MsG0280009528.01.T01:CDS
AAGTATGGAGGAGAAGAGGA+AGG 0.606963 2:+53751032 MsG0280009528.01.T01:CDS
AGTCTCTTCCGAATACTCAA+AGG 0.607798 2:-53750979 None:intergenic
TCATTTATAAGATCCTCCAA+AGG 0.608031 2:-53753767 None:intergenic
GACTTCCAACACCAAGAGCT+AGG 0.608876 2:-53752275 None:intergenic
AGATGAGTCCACTTCTCCCA+TGG 0.616174 2:-53750773 None:intergenic
TCAGTGAGAGGAACCACAGT+AGG 0.618526 2:-53751153 None:intergenic
AAATCAACGTATGTGGAAGG+TGG 0.624894 2:-53750728 None:intergenic
GTGTGATGGGTACAAACCAA+AGG 0.626445 2:-53753729 None:intergenic
CAATGATGCTTATGAGAGTG+TGG 0.635076 2:+53753661 MsG0280009528.01.T01:CDS
TCTCCATCATGATAACCACT+TGG 0.636774 2:-53751075 None:intergenic
CCTAGCATTAGAACAACCAT+GGG 0.637693 2:+53750757 MsG0280009528.01.T01:exon
TTCTCCATCACAGAAGCCAA+AGG 0.639030 2:+53750826 MsG0280009528.01.T01:CDS
GTTGGAAGTCACAAGGATGT+TGG 0.644266 2:+53752288 MsG0280009528.01.T01:CDS
AAATATTCTTGGCCAAGACG+AGG 0.644871 2:+53752317 MsG0280009528.01.T01:CDS
TCATGTTCATCATCAGTGAG+AGG 0.645293 2:-53751165 None:intergenic
GAATACTCAAAGGTACCCCA+TGG 0.648567 2:-53750969 None:intergenic
CAAGAGCTAGGTGAGGGGAA+GGG 0.653939 2:-53752263 None:intergenic
GCAGGTGCATGCAAGGAGTG+GGG 0.659561 2:+53750928 MsG0280009528.01.T01:CDS
AAGTGGTTATCATGATGGAG+AGG 0.662165 2:+53751077 MsG0280009528.01.T01:CDS
TCTTGGTGTTGGAAGTCACA+AGG 0.671209 2:+53752281 MsG0280009528.01.T01:CDS
AACACCAAGAGCTAGGTGAG+GGG 0.675929 2:-53752268 None:intergenic
AGAGATGATATCAGTCCAAG+TGG 0.677627 2:+53751060 MsG0280009528.01.T01:CDS
TCTTTGCAGAGATCCTACTG+TGG 0.678526 2:+53751140 MsG0280009528.01.T01:CDS
CCAACACCAAGAGCTAGGTG+AGG 0.691266 2:-53752270 None:intergenic
CTTGCAAGTCACAAACCATG+GGG 0.765055 2:+53750954 MsG0280009528.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATGAAAAAAAAATTAT+TGG - Chr2:53751419-53751438 None:intergenic 10.0%
!!! AAATATTTTAATATGATGAT+TGG + Chr2:53752533-53752552 MsG0280009528.01.T01:intron 10.0%
!!! ACAAATAAAAAATTAGTTTT+TGG - Chr2:53751536-53751555 None:intergenic 10.0%
!!! AGTAGTTAAATATATTTTAT+TGG - Chr2:53751589-53751608 None:intergenic 10.0%
!!! CAAATAAAAAATTAGTTTTT+GGG - Chr2:53751535-53751554 None:intergenic 10.0%
!!! GTAGTTAAATATATTTTATT+GGG - Chr2:53751588-53751607 None:intergenic 10.0%
!!! TAGTTAAATATATTTTATTG+GGG - Chr2:53751587-53751606 None:intergenic 10.0%
!! ACTATATGAATTGTATTTAT+GGG + Chr2:53753601-53753620 MsG0280009528.01.T01:intron 15.0%
!! TACTATATGAATTGTATTTA+TGG + Chr2:53753600-53753619 MsG0280009528.01.T01:intron 15.0%
!! TCAAGTTATTTAATTGTAAT+AGG - Chr2:53751380-53751399 None:intergenic 15.0%
!! TTAGCCAATAATTTATTATT+TGG + Chr2:53751446-53751465 MsG0280009528.01.T01:intron 15.0%
!! TTTACAAAGAAAAAAATACA+AGG - Chr2:53753411-53753430 None:intergenic 15.0%
!!! AATTTTTTTTTCATTGTTGA+AGG + Chr2:53751421-53751440 MsG0280009528.01.T01:intron 15.0%
!!! ATAAAGTTATTGATAATTGA+TGG - Chr2:53753209-53753228 None:intergenic 15.0%
!!! ATTTTTTGAATGAATTTACT+TGG + Chr2:53751906-53751925 MsG0280009528.01.T01:intron 15.0%
!!! TGAAAAAAAACAAAATTTTG+TGG - Chr2:53750602-53750621 None:intergenic 15.0%
!!! TTTTAATATTAAAATAGCGA+GGG + Chr2:53752734-53752753 MsG0280009528.01.T01:intron 15.0%
!!! TTTTTAATATTAAAATAGCG+AGG + Chr2:53752733-53752752 MsG0280009528.01.T01:intron 15.0%
!! AAAATATAGACCTTTCAATT+GGG + Chr2:53753802-53753821 MsG0280009528.01.T01:CDS 20.0%
!! AAAGAAAAAAATACAAGGTA+AGG - Chr2:53753406-53753425 None:intergenic 20.0%
!! AAATAAAATCTATCATGTTG+GGG + Chr2:53754068-53754087 MsG0280009528.01.T01:three_prime_UTR 20.0%
!! ATTATATTAGACCTACAAAA+TGG + Chr2:53753448-53753467 MsG0280009528.01.T01:intron 20.0%
!! CTATCTTATAGTGATAAATT+TGG - Chr2:53753886-53753905 None:intergenic 20.0%
!! CTCACAAAAATTTCTTAAAT+GGG + Chr2:53752665-53752684 MsG0280009528.01.T01:intron 20.0%
!! GAAATAAAATCTATCATGTT+GGG + Chr2:53754067-53754086 MsG0280009528.01.T01:three_prime_UTR 20.0%
!! GTTATTTAATTGTAATAGGT+TGG - Chr2:53751376-53751395 None:intergenic 20.0%
!! TCTCACAAAAATTTCTTAAA+TGG + Chr2:53752664-53752683 MsG0280009528.01.T01:intron 20.0%
!! TGAAACAATTACCTAAAATT+TGG - Chr2:53751234-53751253 None:intergenic 20.0%
!! TGAAATAAAATCTATCATGT+TGG + Chr2:53754066-53754085 MsG0280009528.01.T01:three_prime_UTR 20.0%
!! TTATATTAGACCTACAAAAT+GGG + Chr2:53753449-53753468 MsG0280009528.01.T01:intron 20.0%
!! TTCTGTTTACTTTCTATTTA+TGG - Chr2:53750690-53750709 None:intergenic 20.0%
!! TTGTAGGTCTAATATAATAT+CGG - Chr2:53753446-53753465 None:intergenic 20.0%
!!! AAAGATATTTTGATATGTTG+AGG - Chr2:53753580-53753599 None:intergenic 20.0%
!!! AAGTTTTGAAGAATTTTTCA+AGG + Chr2:53752200-53752219 MsG0280009528.01.T01:CDS 20.0%
!!! AATTTTTTAATAGAAAAGCG+TGG + Chr2:53753242-53753261 MsG0280009528.01.T01:intron 20.0%
!!! ATCTAAGATTTGGTATTAAT+TGG - Chr2:53753334-53753353 None:intergenic 20.0%
!!! ATTCTTAAACATCTAAGATT+TGG - Chr2:53753344-53753363 None:intergenic 20.0%
!!! ATTTTCAAGAAGAAAAATGT+GGG + Chr2:53753854-53753873 MsG0280009528.01.T01:CDS 20.0%
!!! TCTAAGATTTGGTATTAATT+GGG - Chr2:53753333-53753352 None:intergenic 20.0%
!!! TTTGTTAGTTTTTACTCTTT+TGG + Chr2:53751731-53751750 MsG0280009528.01.T01:intron 20.0%
! AAAATTTGGAGGATATAGAA+GGG - Chr2:53751220-53751239 None:intergenic 25.0%
! AAATATAGACCTTTCAATTG+GGG + Chr2:53753803-53753822 MsG0280009528.01.T01:CDS 25.0%
! AACAATTACCTAAAATTTGG+AGG - Chr2:53751231-53751250 None:intergenic 25.0%
! AATGCTTACATTGTTAACAT+TGG + Chr2:53752402-53752421 MsG0280009528.01.T01:CDS 25.0%
! AATTAAGATCATGTGTGTTA+CGG - Chr2:53751970-53751989 None:intergenic 25.0%
! AATTGGGGAGAAAAATTATT+GGG - Chr2:53753317-53753336 None:intergenic 25.0%
! ACAATTAAATAACTTGACCT+CGG + Chr2:53751383-53751402 MsG0280009528.01.T01:intron 25.0%
! AGTTATGCAATTCATAACAA+TGG - Chr2:53752482-53752501 None:intergenic 25.0%
! ATGTTAACAATGTAAGCATT+TGG - Chr2:53752402-53752421 None:intergenic 25.0%
! ATTTGTCTCCTGATTAATTA+AGG - Chr2:53752517-53752536 None:intergenic 25.0%
! CAAAATATAGACCTTTCAAT+TGG + Chr2:53753801-53753820 MsG0280009528.01.T01:CDS 25.0%
! CGATCAATGAATAATGAATA+TGG - Chr2:53751265-53751284 None:intergenic 25.0%
! CGGTATATTAAACAACTAAA+AGG + Chr2:53751703-53751722 MsG0280009528.01.T01:intron 25.0%
! GTGGCCAAATAATAAATTAT+TGG - Chr2:53751453-53751472 None:intergenic 25.0%
! TAAAATTTGGAGGATATAGA+AGG - Chr2:53751221-53751240 None:intergenic 25.0%
! TAATTGGGGAGAAAAATTAT+TGG - Chr2:53753318-53753337 None:intergenic 25.0%
! TCTTATAGTGATAAATTTGG+AGG - Chr2:53753883-53753902 None:intergenic 25.0%
! TGTTAACAATGTAAGCATTT+GGG - Chr2:53752401-53752420 None:intergenic 25.0%
! TTGAATGAATTTACTTGGAT+TGG + Chr2:53751911-53751930 MsG0280009528.01.T01:intron 25.0%
! TTTCATCATATTGACACATT+CGG + Chr2:53751683-53751702 MsG0280009528.01.T01:intron 25.0%
! TTTGTCTCCTGATTAATTAA+GGG - Chr2:53752516-53752535 None:intergenic 25.0%
!! AAAAATTGGTGTCTATGTTA+TGG - Chr2:53753070-53753089 None:intergenic 25.0%
!! AGTTATTGATAGTTGATTAG+TGG - Chr2:53752693-53752712 None:intergenic 25.0%
!! ATAACATAGACACCAATTTT+TGG + Chr2:53753069-53753088 MsG0280009528.01.T01:intron 25.0%
!! CTAAGATTTGGTATTAATTG+GGG - Chr2:53753332-53753351 None:intergenic 25.0%
!! GAATTGACTCTCAAATAAAT+TGG + Chr2:53752056-53752075 MsG0280009528.01.T01:intron 25.0%
!! GATCTTAATTTTCGTATAAC+TGG + Chr2:53751980-53751999 MsG0280009528.01.T01:intron 25.0%
!! GTTATTGATAGTTGATTAGT+GGG - Chr2:53752692-53752711 None:intergenic 25.0%
!! TTCATAGTCTTAATTTGGTT+TGG + Chr2:53751285-53751304 MsG0280009528.01.T01:intron 25.0%
!! TTCTATATCCTCCAAATTTT+AGG + Chr2:53751220-53751239 MsG0280009528.01.T01:CDS 25.0%
!!! CATTTTCAAGAAGAAAAATG+TGG + Chr2:53753853-53753872 MsG0280009528.01.T01:CDS 25.0%
!!! TGAAAGGTCTATATTTTGAA+GGG - Chr2:53753799-53753818 None:intergenic 25.0%
!!! TGCTTTTTTTCGATAATTAC+AGG + Chr2:53750520-53750539 MsG0280009528.01.T01:five_prime_UTR 25.0%
!!! TTGAAAGGTCTATATTTTGA+AGG - Chr2:53753800-53753819 None:intergenic 25.0%
!!! TTTTCAAGAAGAAAAATGTG+GGG + Chr2:53753855-53753874 MsG0280009528.01.T01:CDS 25.0%
!!! TTTTTTTCGATAATTACAGG+TGG + Chr2:53750523-53750542 MsG0280009528.01.T01:five_prime_UTR 25.0%
AAATGACCCCTTAATTAATC+AGG + Chr2:53752506-53752525 MsG0280009528.01.T01:intron 30.0%
AAATTGATGTCAATATGAGC+AGG + Chr2:53752088-53752107 MsG0280009528.01.T01:intron 30.0%
AATTGATGTCAATATGAGCA+GGG + Chr2:53752089-53752108 MsG0280009528.01.T01:intron 30.0%
ACCTATTAGATAACCCAATT+GGG - Chr2:53752825-53752844 None:intergenic 30.0%
AGCGTAAAATAGATCAAGAA+TGG + Chr2:53752358-53752377 MsG0280009528.01.T01:CDS 30.0%
ATTGGGGAGAAAAATTATTG+GGG - Chr2:53753316-53753335 None:intergenic 30.0%
ATTGTTCTTTGCTCAAAGTA+TGG + Chr2:53751017-53751036 MsG0280009528.01.T01:CDS 30.0%
CAATTTCCAATTCTCAATGT+TGG - Chr2:53753541-53753560 None:intergenic 30.0%
CTATGTTATGGAAAACACTT+GGG - Chr2:53753058-53753077 None:intergenic 30.0%
CTTCGAATTATGGAAAAACA+AGG - Chr2:53750573-53750592 None:intergenic 30.0%
GCGTAAAATAGATCAAGAAT+GGG + Chr2:53752359-53752378 MsG0280009528.01.T01:CDS 30.0%
TACCTATTAGATAACCCAAT+TGG - Chr2:53752826-53752845 None:intergenic 30.0%
TACTTATGGGGTTATTCATA+CGG + Chr2:53752439-53752458 MsG0280009528.01.T01:intron 30.0%
TATTGAAGAGATGGAAAAGT+TGG + Chr2:53752128-53752147 MsG0280009528.01.T01:CDS 30.0%
TCATTTATAAGATCCTCCAA+AGG - Chr2:53753770-53753789 None:intergenic 30.0%
TCTATGTTATGGAAAACACT+TGG - Chr2:53753059-53753078 None:intergenic 30.0%
TTAAGACTCCAATCTTAAGT+GGG - Chr2:53753270-53753289 None:intergenic 30.0%
TTGTCTCCTGATTAATTAAG+GGG - Chr2:53752515-53752534 None:intergenic 30.0%
TTTCCAGTCTTTGATATTCT+TGG - Chr2:53751106-53751125 None:intergenic 30.0%
! ATTGAAAACCTCTCTTTTTC+AGG - Chr2:53753707-53753726 None:intergenic 30.0%
! GATCGTTCATAGTCTTAATT+TGG + Chr2:53751280-53751299 MsG0280009528.01.T01:intron 30.0%
! TTATTGGTTAAATTACACCG+AGG - Chr2:53751403-53751422 None:intergenic 30.0%
!! TTGAAAACCTCTCTTTTTCA+GGG - Chr2:53753706-53753725 None:intergenic 30.0%
!!! CGTTTATGACTTTTTTGGAT+AGG - Chr2:53753518-53753537 None:intergenic 30.0%
AAAATCTATCATGTTGGGGA+AGG + Chr2:53754072-53754091 MsG0280009528.01.T01:three_prime_UTR 35.0%
AAATCTATCATGTTGGGGAA+GGG + Chr2:53754073-53754092 MsG0280009528.01.T01:three_prime_UTR 35.0%
AAATTTGGTCTGTGTTCTTC+GGG - Chr2:53750808-53750827 None:intergenic 35.0%
AAGATAGTCTGTGACATATG+TGG + Chr2:53753373-53753392 MsG0280009528.01.T01:intron 35.0%
AAGCTAGCCAATTATTTACG+AGG - Chr2:53751836-53751855 None:intergenic 35.0%
AAGTGATAAGTCCAATCCTT+CGG - Chr2:53752588-53752607 None:intergenic 35.0%
AGAAAAGATTCTCCCCAATT+GGG + Chr2:53752809-53752828 MsG0280009528.01.T01:intron 35.0%
AGATAGTCTGTGACATATGT+GGG + Chr2:53753374-53753393 MsG0280009528.01.T01:intron 35.0%
ATAGCCACCTCGTAAATAAT+TGG + Chr2:53751826-53751845 MsG0280009528.01.T01:intron 35.0%
ATCTCATTCAGGTACTTATG+GGG + Chr2:53752427-53752446 MsG0280009528.01.T01:intron 35.0%
ATGTCACAGACTATCTTCAA+TGG - Chr2:53753370-53753389 None:intergenic 35.0%
CATTGAGAATTGGAAATTGC+AGG + Chr2:53753542-53753561 MsG0280009528.01.T01:intron 35.0%
CCTATTAGATAACCCAATTG+GGG - Chr2:53752824-53752843 None:intergenic 35.0%
CGAGACTAAGTACCAAAAAT+TGG - Chr2:53753084-53753103 None:intergenic 35.0%
CTTAAGACTCCAATCTTAAG+TGG - Chr2:53753271-53753290 None:intergenic 35.0%
GAAATTTGGTCTGTGTTCTT+CGG - Chr2:53750809-53750828 None:intergenic 35.0%
GATCTCATTCAGGTACTTAT+GGG + Chr2:53752426-53752445 MsG0280009528.01.T01:intron 35.0%
GGTTTGTAAATCAACGTATG+TGG - Chr2:53750738-53750757 None:intergenic 35.0%
GTCTTGGCCAAGAATATTTA+TGG - Chr2:53752316-53752335 None:intergenic 35.0%
GTTGGCACCATAAATATTCT+TGG + Chr2:53752306-53752325 MsG0280009528.01.T01:CDS 35.0%
TAAACGCCAACATTGAGAAT+TGG + Chr2:53753532-53753551 MsG0280009528.01.T01:intron 35.0%
TAGAAAAGATTCTCCCCAAT+TGG + Chr2:53752808-53752827 MsG0280009528.01.T01:intron 35.0%
TCACCAAGAATATCAAAGAC+TGG + Chr2:53751100-53751119 MsG0280009528.01.T01:CDS 35.0%
TGATCTCATTCAGGTACTTA+TGG + Chr2:53752425-53752444 MsG0280009528.01.T01:intron 35.0%
TGCTATTGAAAACCTAGTGA+AGG + Chr2:53750900-53750919 MsG0280009528.01.T01:CDS 35.0%
TGTAAATCAACGTATGTGGA+AGG - Chr2:53750734-53750753 None:intergenic 35.0%
TGTCACAGACTATCTTCAAT+GGG - Chr2:53753369-53753388 None:intergenic 35.0%
TTACATTGGTGTAGTGTGAT+GGG - Chr2:53753745-53753764 None:intergenic 35.0%
TTTACATTGGTGTAGTGTGA+TGG - Chr2:53753746-53753765 None:intergenic 35.0%
TTTCTTCTCTCTCACTTACA+AGG - Chr2:53752953-53752972 None:intergenic 35.0%
TTTGTACATTTGCGACATTG+TGG + Chr2:53752992-53753011 MsG0280009528.01.T01:intron 35.0%
! AAAAACACAGCCCATTTTGT+AGG - Chr2:53753462-53753481 None:intergenic 35.0%
! AAGAAATTTTTGTGAGACGC+TGG - Chr2:53752661-53752680 None:intergenic 35.0%
! AATTGGGGAGAATCTTTTCT+AGG - Chr2:53752809-53752828 None:intergenic 35.0%
! ACAATGTAAGCATTTGGGAT+TGG - Chr2:53752396-53752415 None:intergenic 35.0%
! ACTAGGTTTTCAATAGCAGA+TGG - Chr2:53750898-53750917 None:intergenic 35.0%
! AGAAATTTTTGTGAGACGCT+GGG - Chr2:53752660-53752679 None:intergenic 35.0%
! ATGATGATCGACTTACTCAA+TGG + Chr2:53751184-53751203 MsG0280009528.01.T01:CDS 35.0%
! ATTGGGGAGAATCTTTTCTA+GGG - Chr2:53752808-53752827 None:intergenic 35.0%
! GAGAGGTTTTCAATTACCTT+TGG + Chr2:53753713-53753732 MsG0280009528.01.T01:CDS 35.0%
! GGTCTTAACCATTTAAGACT+CGG - Chr2:53752849-53752868 None:intergenic 35.0%
! TAACATTGGTGATCTCATTC+AGG + Chr2:53752416-53752435 MsG0280009528.01.T01:CDS 35.0%
! TCACCATTATAGAGTGTTAG+TGG - Chr2:53752038-53752057 None:intergenic 35.0%
! TTTTCAATAGCAGATGGATC+TGG - Chr2:53750892-53750911 None:intergenic 35.0%
!! AATAGGTACCGAGTCTTAAA+TGG + Chr2:53752838-53752857 MsG0280009528.01.T01:intron 35.0%
!! GAACTTATAGCTTTGAGCTT+AGG + Chr2:53752165-53752184 MsG0280009528.01.T01:CDS 35.0%
!!! ACTGTCACTACTTTTTTGAG+AGG + Chr2:53750632-53750651 MsG0280009528.01.T01:five_prime_UTR 35.0%
!!! GTTGGCGTTTATGACTTTTT+TGG - Chr2:53753523-53753542 None:intergenic 35.0%
AAAACACTTGGGTGACATTG+GGG - Chr2:53753047-53753066 None:intergenic 40.0%
AAAGTTGGCACATAAACTGC+TGG + Chr2:53752143-53752162 MsG0280009528.01.T01:CDS 40.0%
AAATATTCTTGGCCAAGACG+AGG + Chr2:53752317-53752336 MsG0280009528.01.T01:CDS 40.0%
AAATCAACGTATGTGGAAGG+TGG - Chr2:53750731-53750750 None:intergenic 40.0%
AACCTAGTGAAGGAAATTGC+AGG + Chr2:53750910-53750929 MsG0280009528.01.T01:CDS 40.0%
AATCTATCATGTTGGGGAAG+GGG + Chr2:53754074-53754093 MsG0280009528.01.T01:three_prime_UTR 40.0%
ACGAGTGACTACAACTGAAT+TGG + Chr2:53753955-53753974 MsG0280009528.01.T01:three_prime_UTR 40.0%
AGAGATGATATCAGTCCAAG+TGG + Chr2:53751060-53751079 MsG0280009528.01.T01:CDS 40.0%
AGATCATGTGTGTTACGGTT+TGG - Chr2:53751965-53751984 None:intergenic 40.0%
AGTCCAAGTGGTTATCATGA+TGG + Chr2:53751072-53751091 MsG0280009528.01.T01:CDS 40.0%
AGTCTCTTCCGAATACTCAA+AGG - Chr2:53750982-53751001 None:intergenic 40.0%
AGTGATAAGTCCAATCCTTC+GGG - Chr2:53752587-53752606 None:intergenic 40.0%
ATCCTCCAAAGGCTTTACAT+TGG - Chr2:53753759-53753778 None:intergenic 40.0%
CAATGATGCTTATGAGAGTG+TGG + Chr2:53753661-53753680 MsG0280009528.01.T01:CDS 40.0%
CCATGGTTGTTCTAATGCTA+GGG - Chr2:53750759-53750778 None:intergenic 40.0%
CCCCAATTGGGTTATCTAAT+AGG + Chr2:53752821-53752840 MsG0280009528.01.T01:intron 40.0%
CCTAGCATTAGAACAACCAT+GGG + Chr2:53750757-53750776 MsG0280009528.01.T01:exon 40.0%
CTACACCAATGTAAAGCCTT+TGG + Chr2:53753751-53753770 MsG0280009528.01.T01:CDS 40.0%
CTAGCCAATTATTTACGAGG+TGG - Chr2:53751833-53751852 None:intergenic 40.0%
CTAGTCACACTTATCCTCAA+AGG + Chr2:53751474-53751493 MsG0280009528.01.T01:intron 40.0%
CTGGTGGTTGTTGGAATATT+GGG - Chr2:53750873-53750892 None:intergenic 40.0%
GAAAACACTTGGGTGACATT+GGG - Chr2:53753048-53753067 None:intergenic 40.0%
GAGAATTGGAAATTGCAGGT+TGG + Chr2:53753546-53753565 MsG0280009528.01.T01:intron 40.0%
GCACCACTAACACTCTATAA+TGG + Chr2:53752032-53752051 MsG0280009528.01.T01:intron 40.0%
GCACGAGTATATTGAAGAGA+TGG + Chr2:53752119-53752138 MsG0280009528.01.T01:CDS 40.0%
GCAGCTTGAATTTGAACTTG+AGG - Chr2:53752014-53752033 None:intergenic 40.0%
GGGGTCTTAAATAAGACTCT+AGG + Chr2:53752772-53752791 MsG0280009528.01.T01:intron 40.0%
GTGGTGACAACTTCGAATTA+TGG - Chr2:53750583-53750602 None:intergenic 40.0%
GTTCTTTGCTCAAAGTATGG+AGG + Chr2:53751020-53751039 MsG0280009528.01.T01:CDS 40.0%
TACATTTGCGACATTGTGGT+TGG + Chr2:53752996-53753015 MsG0280009528.01.T01:intron 40.0%
TATTGGGGAGAGGTCAATTA+CGG - Chr2:53750857-53750876 None:intergenic 40.0%
TCATGTTCATCATCAGTGAG+AGG - Chr2:53751168-53751187 None:intergenic 40.0%
TCTCCATCATGATAACCACT+TGG - Chr2:53751078-53751097 None:intergenic 40.0%
TCTGGTGGTTGTTGGAATAT+TGG - Chr2:53750874-53750893 None:intergenic 40.0%
TCTTGCAAGTCACAAACCAT+GGG + Chr2:53750953-53750972 MsG0280009528.01.T01:CDS 40.0%
TGGTGGTTGTTGGAATATTG+GGG - Chr2:53750872-53750891 None:intergenic 40.0%
TTCTTGCAAGTCACAAACCA+TGG + Chr2:53750952-53750971 MsG0280009528.01.T01:CDS 40.0%
TTTGGAGGATATAGAAGGGT+TGG - Chr2:53751216-53751235 None:intergenic 40.0%
! AAGTGGTTATCATGATGGAG+AGG + Chr2:53751077-53751096 MsG0280009528.01.T01:CDS 40.0%
! ATGGGGTACCTTTGAGTATT+CGG + Chr2:53750971-53750990 MsG0280009528.01.T01:CDS 40.0%
! GCTTCTGTGATGGAGAAATT+TGG - Chr2:53750823-53750842 None:intergenic 40.0%
! TTAAGACCCCGACTTTTAAG+CGG - Chr2:53752762-53752781 None:intergenic 40.0%
!!! CTGTTTTGTTTGTGCAGGTT+TGG + Chr2:53753636-53753655 MsG0280009528.01.T01:intron 40.0%
!!! GCAAACTGTTTTGTTTGTGC+AGG + Chr2:53753631-53753650 MsG0280009528.01.T01:intron 40.0%
AAGTATGGAGGAGAAGAGGA+AGG + Chr2:53751032-53751051 MsG0280009528.01.T01:CDS 45.0%
AGATGCTTGCCCCAATTGAA+AGG - Chr2:53753815-53753834 None:intergenic 45.0%
ATTGGGGAGAGGTCAATTAC+GGG - Chr2:53750856-53750875 None:intergenic 45.0%
ATTTCGTCTTCAAACCCCGA+AGG + Chr2:53752569-53752588 MsG0280009528.01.T01:intron 45.0%
CACCAATGTAAAGCCTTTGG+AGG + Chr2:53753754-53753773 MsG0280009528.01.T01:CDS 45.0%
CACCTGCAATTTCCTTCACT+AGG - Chr2:53750915-53750934 None:intergenic 45.0%
CCCATGGTTGTTCTAATGCT+AGG - Chr2:53750760-53750779 None:intergenic 45.0%
CCCTAGCATTAGAACAACCA+TGG + Chr2:53750756-53750775 MsG0280009528.01.T01:exon 45.0%
CGATAATTACAGGTGGTCAG+TGG + Chr2:53750530-53750549 MsG0280009528.01.T01:five_prime_UTR 45.0%
CTCAAAGTATGGAGGAGAAG+AGG + Chr2:53751028-53751047 MsG0280009528.01.T01:CDS 45.0%
CTTGCAAGTCACAAACCATG+GGG + Chr2:53750954-53750973 MsG0280009528.01.T01:CDS 45.0%
GAGGATAAGTGTGACTAGAG+TGG - Chr2:53751472-53751491 None:intergenic 45.0%
GGAAAACACTTGGGTGACAT+TGG - Chr2:53753049-53753068 None:intergenic 45.0%
GTCAATTACGGGAACTCCTT+TGG - Chr2:53750845-53750864 None:intergenic 45.0%
GTGATAAGTCCAATCCTTCG+GGG - Chr2:53752586-53752605 None:intergenic 45.0%
GTTGGAAGTCACAAGGATGT+TGG + Chr2:53752288-53752307 MsG0280009528.01.T01:CDS 45.0%
GTTGTTGGAATATTGGGGAG+AGG - Chr2:53750867-53750886 None:intergenic 45.0%
TAGAACAACCATGGGAGAAG+TGG + Chr2:53750765-53750784 MsG0280009528.01.T01:exon 45.0%
TCAATAGCAGATGGATCTGG+TGG - Chr2:53750889-53750908 None:intergenic 45.0%
TCGTCAACCCTGAAAAAGAG+AGG + Chr2:53753696-53753715 MsG0280009528.01.T01:CDS 45.0%
TCTTTGCAGAGATCCTACTG+TGG + Chr2:53751140-53751159 MsG0280009528.01.T01:CDS 45.0%
TGACCAATGTCACGTGAGAT+TGG - Chr2:53752895-53752914 None:intergenic 45.0%
TGTAGCTGTGGGTAAGGATA+GGG + Chr2:53751497-53751516 MsG0280009528.01.T01:intron 45.0%
TTCTCCATCACAGAAGCCAA+AGG + Chr2:53750826-53750845 MsG0280009528.01.T01:CDS 45.0%
! AACTCCTTTGGCTTCTGTGA+TGG - Chr2:53750833-53750852 None:intergenic 45.0%
! ATCCTCAAAGGTGTAGCTGT+GGG + Chr2:53751486-53751505 MsG0280009528.01.T01:intron 45.0%
! ATTTTTGTGAGACGCTGGGT+TGG - Chr2:53752656-53752675 None:intergenic 45.0%
! TAAGACCCCGACTTTTAAGC+GGG - Chr2:53752761-53752780 None:intergenic 45.0%
! TATCCTCAAAGGTGTAGCTG+TGG + Chr2:53751485-53751504 MsG0280009528.01.T01:intron 45.0%
!! GAATACTCAAAGGTACCCCA+TGG - Chr2:53750972-53750991 None:intergenic 45.0%
!! GTGTGATGGGTACAAACCAA+AGG - Chr2:53753732-53753751 None:intergenic 45.0%
!! TCTTGGTGTTGGAAGTCACA+AGG + Chr2:53752281-53752300 MsG0280009528.01.T01:CDS 45.0%
!!! ATTTTATTTTATTTTATTGA+AGG - Chr2:53754047-53754066 None:intergenic 5.0%
!!! TTTTATTTTATTTTATTGAA+GGG - Chr2:53754046-53754065 None:intergenic 5.0%
AACACCAAGAGCTAGGTGAG+GGG - Chr2:53752271-53752290 None:intergenic 50.0%
ACCCAATGTCACACAATGGG+AGG - Chr2:53752871-53752890 None:intergenic 50.0%
ACCCTCCCATTGTGTGACAT+TGG + Chr2:53752866-53752885 MsG0280009528.01.T01:intron 50.0%
AGATGAGTCCACTTCTCCCA+TGG - Chr2:53750776-53750795 None:intergenic 50.0%
ATGGAGGAGAAGAGGAAGGT+TGG + Chr2:53751036-53751055 MsG0280009528.01.T01:CDS 50.0%
CAACACCAAGAGCTAGGTGA+GGG - Chr2:53752272-53752291 None:intergenic 50.0%
CAGATGGATCTGGTGGTTGT+TGG - Chr2:53750882-53750901 None:intergenic 50.0%
CCCAATGTCACACAATGGGA+GGG - Chr2:53752870-53752889 None:intergenic 50.0%
CCCTCCCATTGTGTGACATT+GGG + Chr2:53752867-53752886 MsG0280009528.01.T01:intron 50.0%
GACTTCCAACACCAAGAGCT+AGG - Chr2:53752278-53752297 None:intergenic 50.0%
GCGTGGATCCCACTTAAGAT+TGG + Chr2:53753259-53753278 MsG0280009528.01.T01:intron 50.0%
GGAAATTGCAGGTGCATGCA+AGG + Chr2:53750921-53750940 MsG0280009528.01.T01:CDS 50.0%
GGCACCCAATGTCACACAAT+GGG - Chr2:53752874-53752893 None:intergenic 50.0%
GGGTAAGGATAGGGTAGCTT+TGG + Chr2:53751506-53751525 MsG0280009528.01.T01:intron 50.0%
GTCTTCAAACCCCGAAGGAT+TGG + Chr2:53752574-53752593 MsG0280009528.01.T01:intron 50.0%
GTGCCAATCTCACGTGACAT+TGG + Chr2:53752889-53752908 MsG0280009528.01.T01:intron 50.0%
GTGTAGCTGTGGGTAAGGAT+AGG + Chr2:53751496-53751515 MsG0280009528.01.T01:intron 50.0%
TACCCACAGCTACACCTTTG+AGG - Chr2:53751491-53751510 None:intergenic 50.0%
TCAGTGAGAGGAACCACAGT+AGG - Chr2:53751156-53751175 None:intergenic 50.0%
TGGCACCCAATGTCACACAA+TGG - Chr2:53752875-53752894 None:intergenic 50.0%
! CAAAGGTGTAGCTGTGGGTA+AGG + Chr2:53751491-53751510 MsG0280009528.01.T01:intron 50.0%
AGGGTCCCGCTTAAAAGTCG+GGG + Chr2:53752753-53752772 MsG0280009528.01.T01:intron 55.0%
CAAGACCTGCAACCTCGTCT+TGG - Chr2:53752332-53752351 None:intergenic 55.0%
CAAGAGCTAGGTGAGGGGAA+GGG - Chr2:53752266-53752285 None:intergenic 55.0%
CCAACACCAAGAGCTAGGTG+AGG - Chr2:53752273-53752292 None:intergenic 55.0%
CGAGGGTCCCGCTTAAAAGT+CGG + Chr2:53752751-53752770 MsG0280009528.01.T01:intron 55.0%
GAGGGTCCCGCTTAAAAGTC+GGG + Chr2:53752752-53752771 MsG0280009528.01.T01:intron 55.0%
TGCAGGTGCATGCAAGGAGT+GGG + Chr2:53750927-53750946 MsG0280009528.01.T01:CDS 55.0%
TTGCAGGTGCATGCAAGGAG+TGG + Chr2:53750926-53750945 MsG0280009528.01.T01:CDS 55.0%
! CCTCACCTAGCTCTTGGTGT+TGG + Chr2:53752270-53752289 MsG0280009528.01.T01:CDS 55.0%
! TTGTGAGACGCTGGGTTGGA+GGG - Chr2:53752652-53752671 None:intergenic 55.0%
! TTTGTGAGACGCTGGGTTGG+AGG - Chr2:53752653-53752672 None:intergenic 55.0%
CCAAGAGCTAGGTGAGGGGA+AGG - Chr2:53752267-53752286 None:intergenic 60.0%
CTTGGCCAAGACGAGGTTGC+AGG + Chr2:53752324-53752343 MsG0280009528.01.T01:CDS 60.0%
GCAGGTGCATGCAAGGAGTG+GGG + Chr2:53750928-53750947 MsG0280009528.01.T01:CDS 60.0%
! CCTTCCCCTCACCTAGCTCT+TGG + Chr2:53752264-53752283 MsG0280009528.01.T01:CDS 60.0%
!! AGGTGAGGGGAAGGGCATTG+AGG - Chr2:53752258-53752277 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 53750519 53754237 53750519 ID=MsG0280009528.01;Name=MsG0280009528.01
Chr2 mRNA 53750519 53754237 53750519 ID=MsG0280009528.01.T01;Parent=MsG0280009528.01;Name=MsG0280009528.01.T01;_AED=0.28;_eAED=0.28;_QI=256|1|1|1|1|1|3|327|350
Chr2 exon 53753653 53754237 53753653 ID=MsG0280009528.01.T01:exon:45116;Parent=MsG0280009528.01.T01
Chr2 exon 53752110 53752437 53752110 ID=MsG0280009528.01.T01:exon:45115;Parent=MsG0280009528.01.T01
Chr2 exon 53750519 53751241 53750519 ID=MsG0280009528.01.T01:exon:45114;Parent=MsG0280009528.01.T01
Chr2 five_prime_UTR 53750519 53750774 53750519 ID=MsG0280009528.01.T01:five_prime_utr;Parent=MsG0280009528.01.T01
Chr2 CDS 53750775 53751241 53750775 ID=MsG0280009528.01.T01:cds;Parent=MsG0280009528.01.T01
Chr2 CDS 53752110 53752437 53752110 ID=MsG0280009528.01.T01:cds;Parent=MsG0280009528.01.T01
Chr2 CDS 53753653 53753910 53753653 ID=MsG0280009528.01.T01:cds;Parent=MsG0280009528.01.T01
Chr2 three_prime_UTR 53753911 53754237 53753911 ID=MsG0280009528.01.T01:three_prime_utr;Parent=MsG0280009528.01.T01
Gene Sequence

>MsG0280009528.01.T01

ATGGGAGAAGTGGACTCATCTTTTGTTCAACCCGAAGAACACAGACCAAATTTCTCCATCACAGAAGCCAAAGGAGTTCCCGTAATTGACCTCTCCCCAATATTCCAACAACCACCAGATCCATCTGCTATTGAAAACCTAGTGAAGGAAATTGCAGGTGCATGCAAGGAGTGGGGATTCTTGCAAGTCACAAACCATGGGGTACCTTTGAGTATTCGGAAGAGACTTGACGAAGCGTCTAAATTGTTCTTTGCTCAAAGTATGGAGGAGAAGAGGAAGGTTGGCAGAGATGATATCAGTCCAAGTGGTTATCATGATGGAGAGGTCACCAAGAATATCAAAGACTGGAAAGAATGCTTTGATTTTCTTTGCAGAGATCCTACTGTGGTTCCTCTCACTGATGATGAACATGATGATCGACTTACTCAATGGACTAATCCAACCCTTCTATATCCTCCAAATTTTAGGGTGATAATGCACGAGTATATTGAAGAGATGGAAAAGTTGGCACATAAACTGCTGGAACTTATAGCTTTGAGCTTAGGACTTAAAGCAGAAAGTTTTGAAGAATTTTTCAAGGATCAAACTAATTTTTTAAAACTCAATCACTATCCTCAATGCCCTTCCCCTCACCTAGCTCTTGGTGTTGGAAGTCACAAGGATGTTGGCACCATAAATATTCTTGGCCAAGACGAGGTTGCAGGTCTTGAAGTGAAGCGTAAAATAGATCAAGAATGGGTTCTTGTGAAACCAATCCCAAATGCTTACATTGTTAACATTGGTGATCTCATTCAGGTTTGGAGCAATGATGCTTATGAGAGTGTGGAACACAGAGTTATCGTCAACCCTGAAAAAGAGAGGTTTTCAATTACCTTTGGTTTGTACCCATCACACTACACCAATGTAAAGCCTTTGGAGGATCTTATAAATGAAGAGAACCCTTCAAAATATAGACCTTTCAATTGGGGCAAGCATCTTGTCAATAGAAAGAACAGCATTTTCAAGAAGAAAAATGTGGGGAACCTCCAAATTTATCACTATAAGATAGCATAA

Protein sequence

>MsG0280009528.01.T01

MGEVDSSFVQPEEHRPNFSITEAKGVPVIDLSPIFQQPPDPSAIENLVKEIAGACKEWGFLQVTNHGVPLSIRKRLDEASKLFFAQSMEEKRKVGRDDISPSGYHDGEVTKNIKDWKECFDFLCRDPTVVPLTDDEHDDRLTQWTNPTLLYPPNFRVIMHEYIEEMEKLAHKLLELIALSLGLKAESFEEFFKDQTNFLKLNHYPQCPSPHLALGVGSHKDVGTINILGQDEVAGLEVKRKIDQEWVLVKPIPNAYIVNIGDLIQVWSNDAYESVEHRVIVNPEKERFSITFGLYPSHYTNVKPLEDLINEENPSKYRPFNWGKHLVNRKNSIFKKKNVGNLQIYHYKIA*