AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010462.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010462.01.T01 MTR_2g084580 96.739 92 2 1 135 226 323 413 1.92e-52 178
MsG0280010462.01.T01 MTR_2g084580 44.785 163 39 4 1 112 1 163 1.65e-21 93.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010462.01.T01 AT5G22820 51.240 121 55 2 109 226 291 410 4.35e-25 103
MsG0280010462.01.T01 AT5G22820 51.240 121 55 2 109 226 291 410 8.32e-25 102
MsG0280010462.01.T01 AT5G22820 51.240 121 55 2 109 226 291 410 8.32e-25 102

Find 82 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATTCTCGTAGCTTAAAAT+TGG 0.216716 2:+69974163 MsG0280010462.01.T01:five_prime_UTR
CTTCCAGATTCGTGCCTCTT+AGG 0.294579 2:+69978221 MsG0280010462.01.T01:intron
ACATAAGCTTTGAGCTTAGA+TGG 0.305930 2:-69976386 None:intergenic
TGCGGTACCTCAGCTTTATC+TGG 0.309287 2:-69977889 None:intergenic
AAGGAGGATGCTGAGAATAA+TGG 0.324222 2:+69979600 MsG0280010462.01.T01:three_prime_UTR
CTTCGGTTGGTGAGGATGTA+TGG 0.327244 2:+69974797 MsG0280010462.01.T01:CDS
GGAGCTTTAGAGACTTTGTT+AGG 0.328320 2:-69976365 None:intergenic
CAGTTGTCCAGACCAATCTT+TGG 0.361160 2:+69979720 MsG0280010462.01.T01:three_prime_UTR
AGCTTAACTGTTGAGGCTTC+AGG 0.370459 2:-69979771 None:intergenic
AAGTTTATTCCACCTTGTTT+CGG 0.383635 2:+69978357 MsG0280010462.01.T01:three_prime_UTR
AGGAGGATGCTGAGAATAAT+GGG 0.389583 2:+69979601 MsG0280010462.01.T01:three_prime_UTR
TTAATTCTTCGTGCTATTGA+AGG 0.395736 2:+69977784 MsG0280010462.01.T01:CDS
TCTTCTTCTTCTTCAATGGA+TGG 0.396399 2:-69974233 None:intergenic
CTCGGTCAACGGAGTTGCTT+CGG 0.403237 2:+69974583 MsG0280010462.01.T01:CDS
CAAGGAGAATGTCAGGATTT+GGG 0.405190 2:+69974751 MsG0280010462.01.T01:intron
CACCTTGTTTCGGTTCTTGT+CGG 0.406866 2:+69978367 MsG0280010462.01.T01:three_prime_UTR
TGATAAGGAAGCTCTGCCTT+TGG 0.408197 2:+69974553 MsG0280010462.01.T01:CDS
AGTTATAGATGAACATTCTC+AGG 0.417677 2:+69977813 MsG0280010462.01.T01:CDS
CTAAGCTCAAAGCTTATGTT+TGG 0.433824 2:+69976390 MsG0280010462.01.T01:CDS
GAGGATGTATGGGAAGAATA+TGG 0.436028 2:+69974808 MsG0280010462.01.T01:CDS
GGTGATGGAATTGAACGTTC+TGG 0.436756 2:+69974772 MsG0280010462.01.T01:CDS
CTTTGAACTCTTTACTATTG+AGG 0.438244 2:+69976304 MsG0280010462.01.T01:CDS
CATAATAAAGTAATTCTACT+TGG 0.440478 2:-69979687 None:intergenic
TCTTCAATGGATGGATTTGT+CGG 0.444494 2:-69974224 None:intergenic
TTCTCGTAGCTTAAAATTGG+AGG 0.449038 2:+69974166 MsG0280010462.01.T01:five_prime_UTR
CATGTCAAACCTCCAAAGAT+TGG 0.455428 2:-69979732 None:intergenic
TATCAAGGAGATTATATACT+AGG 0.463137 2:-69974535 None:intergenic
AGAGACTTTGTTAGGAGGAT+GGG 0.463156 2:-69976357 None:intergenic
AGTATATAATCTCCTTGATA+AGG 0.464094 2:+69974538 MsG0280010462.01.T01:CDS
CAATGTGTTGACTCCTGTCC+TGG 0.467526 2:+69978427 MsG0280010462.01.T01:three_prime_UTR
TTGGATTCCGCCTCGGTCAA+CGG 0.472032 2:+69974572 MsG0280010462.01.T01:CDS
AATTGAACGTTCTGGTGCTT+CGG 0.475047 2:+69974780 MsG0280010462.01.T01:CDS
TAACCAGCATTGTGAATCAA+TGG 0.475866 2:+69979568 MsG0280010462.01.T01:three_prime_UTR
ACCTCGTGTGATGGAGGAAA+AGG 0.480383 2:-69974293 None:intergenic
TAGAGACTTTGTTAGGAGGA+TGG 0.480826 2:-69976358 None:intergenic
CTAGCATCTGCTGTTGAACC+AGG 0.481137 2:-69978445 None:intergenic
TGACCCTAGCCGAGGAGCCT+TGG 0.498070 2:+69974607 MsG0280010462.01.T01:CDS
ATCTGCTGTTGAACCAGGAC+AGG 0.502207 2:-69978440 None:intergenic
TATACCAAGGCTCCTCGGCT+AGG 0.502669 2:-69974611 None:intergenic
GAATGTCAGGATTTGGGTGA+TGG 0.503091 2:+69974757 MsG0280010462.01.T01:intron
TGGAAGCAAGAAATGCAGTC+TGG 0.512911 2:+69978281 MsG0280010462.01.T01:CDS
CAAACCTCCAAAGATTGGTC+TGG 0.513361 2:-69979727 None:intergenic
GACAGGAGTCAACACATTGT+TGG 0.513955 2:-69978423 None:intergenic
AAGGCAGAGCTTCCTTATCA+AGG 0.516306 2:-69974550 None:intergenic
GGATTTGTCGGAACCGCCAT+GGG 0.517514 2:-69974212 None:intergenic
GAATCAATGGATTGCTGTAA+AGG 0.518691 2:+69979581 MsG0280010462.01.T01:three_prime_UTR
ATACCAAGGCTCCTCGGCTA+GGG 0.521780 2:-69974610 None:intergenic
ATATTTACCATGTGATATCT+CGG 0.526826 2:-69978102 None:intergenic
TTGTCCAGACCAATCTTTGG+AGG 0.536546 2:+69979723 MsG0280010462.01.T01:three_prime_UTR
TTCCAATCATCCGAAGCAAA+AGG 0.538041 2:-69978263 None:intergenic
AATCCATTGATTCACAATGC+TGG 0.539426 2:-69979571 None:intergenic
TCTGCCTTTGGATTCCGCCT+CGG 0.542163 2:+69974565 MsG0280010462.01.T01:CDS
TATCAATCAGACCACCTAAG+AGG 0.544952 2:-69978235 None:intergenic
CTTTGACAGCTTAACTGTTG+AGG 0.545756 2:-69979778 None:intergenic
GAACGTTCTGGTGCTTCGGT+TGG 0.550806 2:+69974784 MsG0280010462.01.T01:CDS
TGGATTTGTCGGAACCGCCA+TGG 0.553089 2:-69974213 None:intergenic
CTTTGTTAGGAGGATGGGAA+AGG 0.555168 2:-69976352 None:intergenic
TCTCGTAGCTTAAAATTGGA+GGG 0.555905 2:+69974167 MsG0280010462.01.T01:five_prime_UTR
TTCTGGTGCTTCGGTTGGTG+AGG 0.569662 2:+69974789 MsG0280010462.01.T01:CDS
TTATCTATACCAAGGCTCCT+CGG 0.575739 2:-69974616 None:intergenic
CCAGATTCGTGCCTCTTAGG+TGG 0.577487 2:+69978224 MsG0280010462.01.T01:intron
TTCGGTTGGTGAGGATGTAT+GGG 0.587118 2:+69974798 MsG0280010462.01.T01:CDS
TTGACCGAGGCGGAATCCAA+AGG 0.589736 2:-69974569 None:intergenic
GCTTTAGAGACTTTGTTAGG+AGG 0.592806 2:-69976362 None:intergenic
GAGAATAATGGGAATGCTGA+AGG 0.603883 2:+69979612 MsG0280010462.01.T01:three_prime_UTR
AATCGAAACGATTCCCATGG+CGG 0.627072 2:+69974199 MsG0280010462.01.T01:exon
CAAAATCGAAACGATTCCCA+TGG 0.631498 2:+69974196 MsG0280010462.01.T01:exon
TTCCGACAAGAACCGAAACA+AGG 0.636386 2:-69978369 None:intergenic
CATGTGATATCTCGGAAGCA+CGG 0.641382 2:-69978094 None:intergenic
ATGATGATAACCTCGTGTGA+TGG 0.641969 2:-69974302 None:intergenic
GGAGGAAAAGGATGATGTGT+GGG 0.649014 2:-69974281 None:intergenic
CGTGCTTCCGAGATATCACA+TGG 0.649741 2:+69978095 MsG0280010462.01.T01:CDS
TGGAGGAAAAGGATGATGTG+TGG 0.652696 2:-69974282 None:intergenic
CGAAGCAACTCCGTTGACCG+AGG 0.657317 2:-69974582 None:intergenic
TCAATGGATTGCTGTAAAGG+AGG 0.666699 2:+69979584 MsG0280010462.01.T01:three_prime_UTR
ATGATAACCTCGTGTGATGG+AGG 0.671070 2:-69974299 None:intergenic
AGCAACTCCGTTGACCGAGG+CGG 0.671827 2:-69974579 None:intergenic
GCTTCGGATGACCCTAGCCG+AGG 0.672522 2:+69974599 MsG0280010462.01.T01:CDS
AATATTTGCAATAAGAACTG+CGG 0.674411 2:-69978051 None:intergenic
CGACAAGAACCGAAACAAGG+TGG 0.675348 2:-69978366 None:intergenic
CAAGTTTCCAGATAAAGCTG+AGG 0.689931 2:+69977882 MsG0280010462.01.T01:CDS
GAGCTCGAGCACGAGCACGA+TGG 0.728685 2:+69974257 MsG0280010462.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAATAAAATAATATTGAAA+AGG - Chr2:69976896-69976915 None:intergenic 10.0%
!! AAAAAAAATCCATATATACA+AGG - Chr2:69978936-69978955 None:intergenic 15.0%
!! AAATAAAAAAACAAGCAAAA+TGG - Chr2:69977382-69977401 None:intergenic 15.0%
!! ATAAAACAAAAACAAAAAAC+AGG - Chr2:69976064-69976083 None:intergenic 15.0%
!! ATAAATAATTCAAAAGGAAA+TGG - Chr2:69976215-69976234 None:intergenic 15.0%
!! ATATTGACATAATATATGTT+CGG - Chr2:69977209-69977228 None:intergenic 15.0%
!! ATTGACAATAATTAAATGAA+GGG - Chr2:69979285-69979304 None:intergenic 15.0%
!! CATATATTATGTCAATATTA+TGG + Chr2:69977211-69977230 MsG0280010462.01.T01:intron 15.0%
!! GATACATAATTTAATAAGTT+TGG + Chr2:69978777-69978796 MsG0280010462.01.T01:intron 15.0%
!! TAAAACAAAAACAAAAAACA+GGG - Chr2:69976063-69976082 None:intergenic 15.0%
!! TGAAATTGTATAATTTCAAA+GGG + Chr2:69976718-69976737 MsG0280010462.01.T01:intron 15.0%
!! TTGAAATTGTATAATTTCAA+AGG + Chr2:69976717-69976736 MsG0280010462.01.T01:intron 15.0%
!!! ATGATAAAAATGATTTTGAT+TGG - Chr2:69975338-69975357 None:intergenic 15.0%
!!! CTATTATACATTATTTTTGT+TGG + Chr2:69976092-69976111 MsG0280010462.01.T01:intron 15.0%
!!! TACACATTTTTTAATATGAA+AGG - Chr2:69976154-69976173 None:intergenic 15.0%
!! AAATGTCTATTATGTAATTC+TGG + Chr2:69976486-69976505 MsG0280010462.01.T01:intron 20.0%
!! AATTGGTATTAGAAGATAAT+AGG - Chr2:69977662-69977681 None:intergenic 20.0%
!! ACTGAATATCTTAAAATTTC+AGG + Chr2:69977746-69977765 MsG0280010462.01.T01:intron 20.0%
!! AGATTAGTATAGGAATTATT+GGG + Chr2:69975827-69975846 MsG0280010462.01.T01:intron 20.0%
!! ATAGTAGATTTGTAATTAAG+CGG - Chr2:69974333-69974352 None:intergenic 20.0%
!! CAAGGAATAAATAATTCAAA+AGG - Chr2:69976221-69976240 None:intergenic 20.0%
!! CATAATAAAGTAATTCTACT+TGG - Chr2:69979690-69979709 None:intergenic 20.0%
!! CATTGACAATAATTAAATGA+AGG - Chr2:69979286-69979305 None:intergenic 20.0%
!! CATTTAATTATTGTCAATGT+TGG + Chr2:69979287-69979306 MsG0280010462.01.T01:intron 20.0%
!! CTAATGATCTATATGTATTT+AGG + Chr2:69979355-69979374 MsG0280010462.01.T01:intron 20.0%
!! TATAACACTATTGCATTATT+TGG + Chr2:69974422-69974441 MsG0280010462.01.T01:intron 20.0%
!! TGTGAAACTAAAATATTATC+AGG + Chr2:69975746-69975765 MsG0280010462.01.T01:intron 20.0%
!! TTAATTACACCATCAAATTT+CGG + Chr2:69975167-69975186 MsG0280010462.01.T01:intron 20.0%
!! TTCAATAATGTTGTCATAAT+TGG - Chr2:69977679-69977698 None:intergenic 20.0%
!! TTCAGTTTATACAATCAAAA+CGG - Chr2:69975572-69975591 None:intergenic 20.0%
!! TTGACAATAATTAAATGAAG+GGG - Chr2:69979284-69979303 None:intergenic 20.0%
!! TTGGTATAGATAATAAAGAA+GGG + Chr2:69974626-69974645 MsG0280010462.01.T01:intron 20.0%
!! TTGTATAAACTGAAATTAGA+TGG + Chr2:69975578-69975597 MsG0280010462.01.T01:intron 20.0%
!!! AAAAGATTTTACACATGATA+AGG + Chr2:69979011-69979030 MsG0280010462.01.T01:intron 20.0%
!!! ATTTCTTTTTTGTATATGTC+TGG + Chr2:69976692-69976711 MsG0280010462.01.T01:intron 20.0%
!!! TTTTATTTTAACAGAGTGTA+GGG + Chr2:69977443-69977462 MsG0280010462.01.T01:intron 20.0%
!!! TTTTTATTTTAACAGAGTGT+AGG + Chr2:69977442-69977461 MsG0280010462.01.T01:intron 20.0%
! AAAAAACAGGGATAACAATA+CGG - Chr2:69976051-69976070 None:intergenic 25.0%
! AAATACAAAATGCTATAACC+TGG + Chr2:69975368-69975387 MsG0280010462.01.T01:intron 25.0%
! AAGAATATGGTTGTATTTGT+GGG + Chr2:69974821-69974840 MsG0280010462.01.T01:intron 25.0%
! AAGTGCAAATAACTAAATGA+AGG - Chr2:69978485-69978504 None:intergenic 25.0%
! AAGTGTTAACTACAATAATG+CGG - Chr2:69977910-69977929 None:intergenic 25.0%
! AATATTTGCAATAAGAACTG+CGG - Chr2:69978054-69978073 None:intergenic 25.0%
! AGAAAAATAAACCCAATATG+AGG + Chr2:69978816-69978835 MsG0280010462.01.T01:intron 25.0%
! AGTATATAATCTCCTTGATA+AGG + Chr2:69974538-69974557 MsG0280010462.01.T01:CDS 25.0%
! ATATTTACCATGTGATATCT+CGG - Chr2:69978105-69978124 None:intergenic 25.0%
! ATGATTGTTTGAATGTATTG+TGG + Chr2:69975443-69975462 MsG0280010462.01.T01:intron 25.0%
! CAAAAGTGAGATTAATTTCT+AGG - Chr2:69975072-69975091 None:intergenic 25.0%
! CAGAAATCCTCATAATATAA+TGG + Chr2:69979045-69979064 MsG0280010462.01.T01:intron 25.0%
! CTTCTTTATTATCTATACCA+AGG - Chr2:69974627-69974646 None:intergenic 25.0%
! CTTGGTATAGATAATAAAGA+AGG + Chr2:69974625-69974644 MsG0280010462.01.T01:intron 25.0%
! GACATGAAATGAAAATGATT+TGG + Chr2:69977965-69977984 MsG0280010462.01.T01:intron 25.0%
! GAGATTAGTATAGGAATTAT+TGG + Chr2:69975826-69975845 MsG0280010462.01.T01:intron 25.0%
! GATAGATGTAAAAAAGTTGT+TGG + Chr2:69979647-69979666 MsG0280010462.01.T01:three_prime_UTR 25.0%
! GGACTTATAAATGTAATGAA+TGG - Chr2:69979263-69979282 None:intergenic 25.0%
! TAATTTCTCTCTCTTGATTT+CGG + Chr2:69976617-69976636 MsG0280010462.01.T01:intron 25.0%
! TAGGAACTAACTTAAGAAAA+CGG + Chr2:69974985-69975004 MsG0280010462.01.T01:intron 25.0%
! TATCAAGGAGATTATATACT+AGG - Chr2:69974538-69974557 None:intergenic 25.0%
! TGGTATAGATAATAAAGAAG+GGG + Chr2:69974627-69974646 MsG0280010462.01.T01:intron 25.0%
! TTCATCAAGAAAGAAGATAA+TGG - Chr2:69976944-69976963 None:intergenic 25.0%
! TTTGTATTAATACATGCTAC+AGG + Chr2:69975804-69975823 MsG0280010462.01.T01:intron 25.0%
!! AGGTTATAGCATTTTGTATT+TGG - Chr2:69975369-69975388 None:intergenic 25.0%
!! CAAACACGCATAAAATTTTA+CGG - Chr2:69977051-69977070 None:intergenic 25.0%
!! CTATTTTCATTGATGCAAAA+TGG - Chr2:69977633-69977652 None:intergenic 25.0%
!! GGTTATAGCATTTTGTATTT+GGG - Chr2:69975368-69975387 None:intergenic 25.0%
!! TAAGAGTACATCTGAAAATA+TGG + Chr2:69974696-69974715 MsG0280010462.01.T01:intron 25.0%
!! TAAGATTAATGATTAGTTGC+AGG - Chr2:69974401-69974420 None:intergenic 25.0%
!! TAGATATTTGTGGAGTATTT+AGG + Chr2:69974966-69974985 MsG0280010462.01.T01:intron 25.0%
!! TGATATATTTCCTTTTGCTT+CGG + Chr2:69978253-69978272 MsG0280010462.01.T01:CDS 25.0%
!! TTATTGTCAATGTTGGTTAA+TGG + Chr2:69979294-69979313 MsG0280010462.01.T01:intron 25.0%
!!! GTCATTTTATAGCAATATCA+TGG + Chr2:69975515-69975534 MsG0280010462.01.T01:intron 25.0%
!!! TCTCTCTTTCATTTTTGTTA+AGG + Chr2:69976000-69976019 MsG0280010462.01.T01:intron 25.0%
AAATATCGCATTGAAGTCTA+TGG - Chr2:69978145-69978164 None:intergenic 30.0%
AACCTAAATAACAATACACG+TGG - Chr2:69979471-69979490 None:intergenic 30.0%
AAGGAAATGGACAGAATATA+AGG - Chr2:69976202-69976221 None:intergenic 30.0%
ACTGAAAAACAATGGTGAAT+TGG + Chr2:69977991-69978010 MsG0280010462.01.T01:intron 30.0%
AGCCTGAAATATTAGGAATA+GGG + Chr2:69977003-69977022 MsG0280010462.01.T01:intron 30.0%
AGCGCATATTAAATAACAAG+AGG - Chr2:69977934-69977953 None:intergenic 30.0%
AGCTATTATTCCAAAGGTAA+AGG - Chr2:69979540-69979559 None:intergenic 30.0%
AGTTATAGATGAACATTCTC+AGG + Chr2:69977813-69977832 MsG0280010462.01.T01:CDS 30.0%
ATATACCAGCCTGAAATATT+AGG + Chr2:69976996-69977015 MsG0280010462.01.T01:intron 30.0%
ATATTGCACAAGAAACAATC+TGG + Chr2:69977338-69977357 MsG0280010462.01.T01:intron 30.0%
CACAAGCATAATTATAGTGA+TGG + Chr2:69979108-69979127 MsG0280010462.01.T01:intron 30.0%
CATCACTATAATTATGCTTG+TGG - Chr2:69979110-69979129 None:intergenic 30.0%
CATTTATAATCAGATGCACT+GGG - Chr2:69979443-69979462 None:intergenic 30.0%
CTATTCTCGTAGCTTAAAAT+TGG + Chr2:69974163-69974182 MsG0280010462.01.T01:five_prime_UTR 30.0%
CTTTGAACTCTTTACTATTG+AGG + Chr2:69976304-69976323 MsG0280010462.01.T01:CDS 30.0%
GAAATTTGAATCACGTTTCT+TGG + Chr2:69978545-69978564 MsG0280010462.01.T01:intron 30.0%
GAAGAATATGGTTGTATTTG+TGG + Chr2:69974820-69974839 MsG0280010462.01.T01:intron 30.0%
GACAGAATATAAGGCATAAT+TGG - Chr2:69976193-69976212 None:intergenic 30.0%
GCATAATTATAGTGATGGTT+AGG + Chr2:69979113-69979132 MsG0280010462.01.T01:intron 30.0%
GCTATTATTCCAAAGGTAAA+GGG - Chr2:69979539-69979558 None:intergenic 30.0%
GTAACAGCCATTATATTATG+AGG - Chr2:69979055-69979074 None:intergenic 30.0%
GTCAAAACATTTGATATAGC+AGG - Chr2:69976126-69976145 None:intergenic 30.0%
TAACAAGATGGAAGTCAAAA+AGG - Chr2:69979412-69979431 None:intergenic 30.0%
TAACTATTCATCAATCAGTC+CGG + Chr2:69977707-69977726 MsG0280010462.01.T01:intron 30.0%
TACTCAAAACCGAAATTTGA+TGG - Chr2:69975179-69975198 None:intergenic 30.0%
TAGTGCAACAAGAATTAAGA+TGG - Chr2:69978643-69978662 None:intergenic 30.0%
TATTGCACAAGAAACAATCT+GGG + Chr2:69977339-69977358 MsG0280010462.01.T01:intron 30.0%
TATTTGTTTCCCTTTACCTT+TGG + Chr2:69979527-69979546 MsG0280010462.01.T01:intron 30.0%
TTGCATGATAGAAGATTCAA+AGG - Chr2:69974734-69974753 None:intergenic 30.0%
TTTCTTGTGCAATATTCCAT+AGG - Chr2:69977333-69977352 None:intergenic 30.0%
TTTGAATCTTCTATCATGCA+AGG + Chr2:69974733-69974752 MsG0280010462.01.T01:intron 30.0%
TTTGGACAACTGAAAAACAA+TGG + Chr2:69977983-69978002 MsG0280010462.01.T01:intron 30.0%
! AAGTTTATTCCACCTTGTTT+CGG + Chr2:69978357-69978376 MsG0280010462.01.T01:three_prime_UTR 30.0%
! AGATAATGGTACAAAGAAAG+TGG - Chr2:69976930-69976949 None:intergenic 30.0%
! ATTCAGACTGCATCTTTTTA+TGG + Chr2:69975721-69975740 MsG0280010462.01.T01:intron 30.0%
! CATAGAAAGCTGATATTTTG+TGG + Chr2:69976652-69976671 MsG0280010462.01.T01:intron 30.0%
! CTTGTTGCACTAATTTCTTT+TGG + Chr2:69978651-69978670 MsG0280010462.01.T01:intron 30.0%
! GATTAATTTCTAGGCACATA+CGG - Chr2:69975063-69975082 None:intergenic 30.0%
! GCATGGATTGAAAATTGAAA+TGG - Chr2:69974366-69974385 None:intergenic 30.0%
! TTAATTCTTCGTGCTATTGA+AGG + Chr2:69977784-69977803 MsG0280010462.01.T01:CDS 30.0%
! TTGAGTCTTTTGTATGTTCA+TGG + Chr2:69975097-69975116 MsG0280010462.01.T01:intron 30.0%
! TTTTCATCTTGTATGTGACA+TGG + Chr2:69977858-69977877 MsG0280010462.01.T01:CDS 30.0%
! TTTTCATTGATGCAAAATGG+AGG - Chr2:69977630-69977649 None:intergenic 30.0%
!! AATCAAATAGTGTCGACAAA+AGG + Chr2:69975877-69975896 MsG0280010462.01.T01:intron 30.0%
AAAAGGCAAAACTAGAACCT+AGG - Chr2:69976879-69976898 None:intergenic 35.0%
AAAATGCTATAACCTGGTAG+TGG + Chr2:69975374-69975393 MsG0280010462.01.T01:intron 35.0%
AAGGACTGATTGAGATAATG+TGG + Chr2:69975896-69975915 MsG0280010462.01.T01:intron 35.0%
AAGTATTAGATTCTCCACCT+AGG - Chr2:69975620-69975639 None:intergenic 35.0%
AATGCCTATGTGAAACATGT+CGG + Chr2:69975943-69975962 MsG0280010462.01.T01:intron 35.0%
ACTCGAAGCTTGATTATGAT+GGG - Chr2:69975497-69975516 None:intergenic 35.0%
ACTTATTGTTTGCGATTCTG+AGG + Chr2:69978501-69978520 MsG0280010462.01.T01:intron 35.0%
AGAAATTAACGCATATCCGT+AGG - Chr2:69976605-69976624 None:intergenic 35.0%
AGTATTAGATTCTCCACCTA+GGG - Chr2:69975619-69975638 None:intergenic 35.0%
ATACGGAAATAGTACGAAAC+AGG - Chr2:69976034-69976053 None:intergenic 35.0%
ATGCTACAGGAGATTAGTAT+AGG + Chr2:69975817-69975836 MsG0280010462.01.T01:intron 35.0%
CAGCCTGAAATATTAGGAAT+AGG + Chr2:69977002-69977021 MsG0280010462.01.T01:intron 35.0%
CCAGTGCATCTGATTATAAA+TGG + Chr2:69979441-69979460 MsG0280010462.01.T01:intron 35.0%
CCATTTATAATCAGATGCAC+TGG - Chr2:69979444-69979463 None:intergenic 35.0%
CGTAAAGAAATGAGAGAAAG+TGG - Chr2:69975541-69975560 None:intergenic 35.0%
CTAAGCTCAAAGCTTATGTT+TGG + Chr2:69976390-69976409 MsG0280010462.01.T01:CDS 35.0%
CTATTCCTAATATTTCAGGC+TGG - Chr2:69977004-69977023 None:intergenic 35.0%
CTCATGAGCTATTATTCCAA+AGG - Chr2:69979546-69979565 None:intergenic 35.0%
CTCTTCTTCTTCTTCTTCAA+TGG - Chr2:69974240-69974259 None:intergenic 35.0%
GAATCACGTTTCTTGGAATT+AGG + Chr2:69978552-69978571 MsG0280010462.01.T01:intron 35.0%
GAGTTCAAAGTCTATCATAG+AGG - Chr2:69976294-69976313 None:intergenic 35.0%
GCCTGAAATATTAGGAATAG+GGG + Chr2:69977004-69977023 MsG0280010462.01.T01:intron 35.0%
GGACTATAACAGCAATACTA+GGG - Chr2:69979169-69979188 None:intergenic 35.0%
GTTGGTTAATGGTTCCTAAA+GGG + Chr2:69979305-69979324 MsG0280010462.01.T01:intron 35.0%
TAAATAACAATACACGTGGC+TGG - Chr2:69979467-69979486 None:intergenic 35.0%
TAACAGCAATACTAGGGAAA+TGG - Chr2:69979163-69979182 None:intergenic 35.0%
TAACCAGCATTGTGAATCAA+TGG + Chr2:69979568-69979587 MsG0280010462.01.T01:three_prime_UTR 35.0%
TACACATGCATCCAACAAAT+GGG + Chr2:69974938-69974957 MsG0280010462.01.T01:intron 35.0%
TATCTACATAGCCCATTTGT+TGG - Chr2:69974952-69974971 None:intergenic 35.0%
TCCCCTATTCCTAATATTTC+AGG - Chr2:69977008-69977027 None:intergenic 35.0%
TCGTTACAAATTGATGCAGA+TGG - Chr2:69974658-69974677 None:intergenic 35.0%
TCTCGTAGCTTAAAATTGGA+GGG + Chr2:69974167-69974186 MsG0280010462.01.T01:five_prime_UTR 35.0%
TCTGAGTCATGCAGAAATAT+TGG + Chr2:69976829-69976848 MsG0280010462.01.T01:intron 35.0%
TCTTCTTCTTCTTCAATGGA+TGG - Chr2:69974236-69974255 None:intergenic 35.0%
TGATTAGTGACTCAGAAACA+AGG - Chr2:69977409-69977428 None:intergenic 35.0%
TGCTACATGATTCAATTCCT+AGG + Chr2:69976859-69976878 MsG0280010462.01.T01:intron 35.0%
TGGACTATAACAGCAATACT+AGG - Chr2:69979170-69979189 None:intergenic 35.0%
TTACACATGCATCCAACAAA+TGG + Chr2:69974937-69974956 MsG0280010462.01.T01:intron 35.0%
TTCAATTCATGCCATCCAAA+GGG - Chr2:69978528-69978547 None:intergenic 35.0%
TTCTCGTAGCTTAAAATTGG+AGG + Chr2:69974166-69974185 MsG0280010462.01.T01:five_prime_UTR 35.0%
TTCTGCTAACACCTCATATT+GGG - Chr2:69978830-69978849 None:intergenic 35.0%
TTTCAATTCATGCCATCCAA+AGG - Chr2:69978529-69978548 None:intergenic 35.0%
TTTGATTCAGTGGAACTTCA+TGG - Chr2:69975864-69975883 None:intergenic 35.0%
! ATGGGCTATGTAGATATTTG+TGG + Chr2:69974956-69974975 MsG0280010462.01.T01:intron 35.0%
! CATGTAAATGATTTTGCGCT+GGG - Chr2:69978874-69978893 None:intergenic 35.0%
! TCATGTAAATGATTTTGCGC+TGG - Chr2:69978875-69978894 None:intergenic 35.0%
! TCTTCAATGGATGGATTTGT+CGG - Chr2:69974227-69974246 None:intergenic 35.0%
! TGTTGGTTAATGGTTCCTAA+AGG + Chr2:69979304-69979323 MsG0280010462.01.T01:intron 35.0%
! TTACCTTCTCTAAAAGCTGA+AGG - Chr2:69977257-69977276 None:intergenic 35.0%
! TTTCTTTTGGCCAGAAAAAG+TGG + Chr2:69978664-69978683 MsG0280010462.01.T01:intron 35.0%
!! AATCCATTGATTCACAATGC+TGG - Chr2:69979574-69979593 None:intergenic 35.0%
!! ACATAAGCTTTGAGCTTAGA+TGG - Chr2:69976389-69976408 None:intergenic 35.0%
!! AGCCACGTGTATTGTTATTT+AGG + Chr2:69979466-69979485 MsG0280010462.01.T01:intron 35.0%
!! GAATCAATGGATTGCTGTAA+AGG + Chr2:69979581-69979600 MsG0280010462.01.T01:three_prime_UTR 35.0%
!! GAGTTTCACTCAGTTACTTT+TGG + Chr2:69975245-69975264 MsG0280010462.01.T01:intron 35.0%
!! GCTCTTAAATGTGATTTGCT+TGG + Chr2:69975007-69975026 MsG0280010462.01.T01:intron 35.0%
!!! CTACTACTAACCACTTTTTC+TGG - Chr2:69978677-69978696 None:intergenic 35.0%
!!! CTCTAGACTTATTTTGCACA+GGG + Chr2:69976751-69976770 MsG0280010462.01.T01:intron 35.0%
!!! GCTCATGATGTTTTTAGAAC+TGG + Chr2:69976801-69976820 MsG0280010462.01.T01:intron 35.0%
AAAAACACATGCGGAACTCA+TGG + Chr2:69974858-69974877 MsG0280010462.01.T01:intron 40.0%
AAAATGGAGGTTGTGGATCA+TGG - Chr2:69977617-69977636 None:intergenic 40.0%
AAAGTGGCGAGTCTATTAGA+TGG + Chr2:69977167-69977186 MsG0280010462.01.T01:intron 40.0%
AACAGCCACACAATCATAGT+TGG - Chr2:69979217-69979236 None:intergenic 40.0%
AACTCAGTAACCTCTCTAAC+AGG - Chr2:69976253-69976272 None:intergenic 40.0%
AAGGAGGATGCTGAGAATAA+TGG + Chr2:69979600-69979619 MsG0280010462.01.T01:three_prime_UTR 40.0%
AAGTGGCGAGTCTATTAGAT+GGG + Chr2:69977168-69977187 MsG0280010462.01.T01:intron 40.0%
AATTGAACGTTCTGGTGCTT+CGG + Chr2:69974780-69974799 MsG0280010462.01.T01:CDS 40.0%
ACAATCATAGTTGGTTGCAG+TGG - Chr2:69979208-69979227 None:intergenic 40.0%
AGAAAGTCAGCAGAAAGCTT+TGG + Chr2:69977483-69977502 MsG0280010462.01.T01:intron 40.0%
AGAGACTTTGTTAGGAGGAT+GGG - Chr2:69976360-69976379 None:intergenic 40.0%
AGGAGGATGCTGAGAATAAT+GGG + Chr2:69979601-69979620 MsG0280010462.01.T01:three_prime_UTR 40.0%
AGTAAGCTGTGCAGGATTTA+TGG + Chr2:69976565-69976584 MsG0280010462.01.T01:intron 40.0%
AGTGGAAATCAAATGTGCAG+TGG - Chr2:69979190-69979209 None:intergenic 40.0%
AGTTGTCAGATCAATTCCAC+CGG - Chr2:69977729-69977748 None:intergenic 40.0%
ATGATGATAACCTCGTGTGA+TGG - Chr2:69974305-69974324 None:intergenic 40.0%
ATGCAAAACGAGATAAACCC+TGG - Chr2:69976520-69976539 None:intergenic 40.0%
CAAAATCGAAACGATTCCCA+TGG + Chr2:69974196-69974215 MsG0280010462.01.T01:exon 40.0%
CAAGGAGAATGTCAGGATTT+GGG + Chr2:69974751-69974770 MsG0280010462.01.T01:intron 40.0%
CAAGTTTCCAGATAAAGCTG+AGG + Chr2:69977882-69977901 MsG0280010462.01.T01:CDS 40.0%
CACATGATAAGGAACATGTG+TGG + Chr2:69979022-69979041 MsG0280010462.01.T01:intron 40.0%
CAGGATTTATGGAGGATAGT+AGG + Chr2:69976576-69976595 MsG0280010462.01.T01:intron 40.0%
CATACCGACATGTTTCACAT+AGG - Chr2:69975950-69975969 None:intergenic 40.0%
CATGTCAAACCTCCAAAGAT+TGG - Chr2:69979735-69979754 None:intergenic 40.0%
CTGCTCAAGAATTTCCCTTT+AGG - Chr2:69979322-69979341 None:intergenic 40.0%
CTTCTGCTAACACCTCATAT+TGG - Chr2:69978831-69978850 None:intergenic 40.0%
CTTTGACAGCTTAACTGTTG+AGG - Chr2:69979781-69979800 None:intergenic 40.0%
GAATTGGTCATATCTCCTGT+AGG + Chr2:69978007-69978026 MsG0280010462.01.T01:intron 40.0%
GACTCGAAGCTTGATTATGA+TGG - Chr2:69975498-69975517 None:intergenic 40.0%
GAGAACAGATTGTTAACCGT+GGG + Chr2:69977139-69977158 MsG0280010462.01.T01:intron 40.0%
GAGGATGTATGGGAAGAATA+TGG + Chr2:69974808-69974827 MsG0280010462.01.T01:CDS 40.0%
GCAGGTAATTGAAATGAGCA+TGG - Chr2:69974383-69974402 None:intergenic 40.0%
GTATTAGATTCTCCACCTAG+GGG - Chr2:69975618-69975637 None:intergenic 40.0%
GTCGACACTATTTGATTCAG+TGG - Chr2:69975874-69975893 None:intergenic 40.0%
GTGATGAAAGAATGCCTGAA+AGG + Chr2:69977589-69977608 MsG0280010462.01.T01:intron 40.0%
TAATTCTGGTCCATCAACCA+GGG + Chr2:69976500-69976519 MsG0280010462.01.T01:intron 40.0%
TAGACTTACAGTAACACGCT+CGG - Chr2:69975677-69975696 None:intergenic 40.0%
TAGAGACTTTGTTAGGAGGA+TGG - Chr2:69976361-69976380 None:intergenic 40.0%
TATAATCAGATGCACTGGGA+TGG - Chr2:69979439-69979458 None:intergenic 40.0%
TATCAATCAGACCACCTAAG+AGG - Chr2:69978238-69978257 None:intergenic 40.0%
TATCATGCAAGGAGAATGTC+AGG + Chr2:69974744-69974763 MsG0280010462.01.T01:intron 40.0%
TCAATTCATGCCATCCAAAG+GGG - Chr2:69978527-69978546 None:intergenic 40.0%
TCTAACAGGCAAGTTCATCA+AGG - Chr2:69976239-69976258 None:intergenic 40.0%
TGAGAACAGATTGTTAACCG+TGG + Chr2:69977138-69977157 MsG0280010462.01.T01:intron 40.0%
TGCAACCAACTATGATTGTG+TGG + Chr2:69979209-69979228 MsG0280010462.01.T01:intron 40.0%
TGGACATTCTCAGTCAAAGA+CGG - Chr2:69979090-69979109 None:intergenic 40.0%
TTATCTATACCAAGGCTCCT+CGG - Chr2:69974619-69974638 None:intergenic 40.0%
TTCCAATCATCCGAAGCAAA+AGG - Chr2:69978266-69978285 None:intergenic 40.0%
TTGATGCAAAATGGAGGTTG+TGG - Chr2:69977624-69977643 None:intergenic 40.0%
TTTCTCTCTCTTGATTTCGG+AGG + Chr2:69976620-69976639 MsG0280010462.01.T01:intron 40.0%
! CATGTTTCACATAGGCATTG+AGG - Chr2:69975942-69975961 None:intergenic 40.0%
! CTCCAAAATGTCACTTGTGT+GGG + Chr2:69975404-69975423 MsG0280010462.01.T01:intron 40.0%
! GAGAATAATGGGAATGCTGA+AGG + Chr2:69979612-69979631 MsG0280010462.01.T01:three_prime_UTR 40.0%
! GTCTTGCAGCCTTGTATATA+TGG + Chr2:69978924-69978943 MsG0280010462.01.T01:intron 40.0%
! TAATAGACTCGCCACTTTGA+AGG - Chr2:69977165-69977184 None:intergenic 40.0%
! TCTCCAAAATGTCACTTGTG+TGG + Chr2:69975403-69975422 MsG0280010462.01.T01:intron 40.0%
! TTCCTTTTGCTTCGGATGAT+TGG + Chr2:69978261-69978280 MsG0280010462.01.T01:CDS 40.0%
!! AGCTTGTGAAAAGCATCCTA+TGG + Chr2:69977314-69977333 MsG0280010462.01.T01:intron 40.0%
!! AGTTCCGCATGTGTTTTTAC+TGG - Chr2:69974856-69974875 None:intergenic 40.0%
!! CTTGATTATGATGGGTAGAG+TGG - Chr2:69975489-69975508 None:intergenic 40.0%
!! GAACCTTCAGCTTTTAGAGA+AGG + Chr2:69977251-69977270 MsG0280010462.01.T01:intron 40.0%
!! GCTTTAGAGACTTTGTTAGG+AGG - Chr2:69976365-69976384 None:intergenic 40.0%
!! GGAGCTTTAGAGACTTTGTT+AGG - Chr2:69976368-69976387 None:intergenic 40.0%
!! GGTACTGCTCTACTTTTGTT+GGG + Chr2:69974879-69974898 MsG0280010462.01.T01:intron 40.0%
!! TCAATGGATTGCTGTAAAGG+AGG + Chr2:69979584-69979603 MsG0280010462.01.T01:three_prime_UTR 40.0%
!! TGGTACTGCTCTACTTTTGT+TGG + Chr2:69974878-69974897 MsG0280010462.01.T01:intron 40.0%
!!! GCTCTAGACTTATTTTGCAC+AGG + Chr2:69976750-69976769 MsG0280010462.01.T01:intron 40.0%
!!! GGTGTTATTTTAGCCACCTT+TGG + Chr2:69976772-69976791 MsG0280010462.01.T01:intron 40.0%
AAGCTGTGCAGGATTTATGG+AGG + Chr2:69976568-69976587 MsG0280010462.01.T01:intron 45.0%
AAGGCAGAGCTTCCTTATCA+AGG - Chr2:69974553-69974572 None:intergenic 45.0%
AATCGAAACGATTCCCATGG+CGG + Chr2:69974199-69974218 MsG0280010462.01.T01:exon 45.0%
ACGAGATAAACCCTGGTTGA+TGG - Chr2:69976513-69976532 None:intergenic 45.0%
AGCTTAACTGTTGAGGCTTC+AGG - Chr2:69979774-69979793 None:intergenic 45.0%
AGGCTGGTATATCTGTGTGT+GGG - Chr2:69976988-69977007 None:intergenic 45.0%
ATGATAACCTCGTGTGATGG+AGG - Chr2:69974302-69974321 None:intergenic 45.0%
CAGTTGTCCAGACCAATCTT+TGG + Chr2:69979720-69979739 MsG0280010462.01.T01:three_prime_UTR 45.0%
CATCATGAGCAAAACGCCAA+AGG - Chr2:69976791-69976810 None:intergenic 45.0%
CATGTGATATCTCGGAAGCA+CGG - Chr2:69978097-69978116 None:intergenic 45.0%
CTATTCATCAATCAGTCCGG+TGG + Chr2:69977710-69977729 MsG0280010462.01.T01:intron 45.0%
CTTTGTTAGGAGGATGGGAA+AGG - Chr2:69976355-69976374 None:intergenic 45.0%
GAATGTCAGGATTTGGGTGA+TGG + Chr2:69974757-69974776 MsG0280010462.01.T01:intron 45.0%
GACAGGAGTCAACACATTGT+TGG - Chr2:69978426-69978445 None:intergenic 45.0%
GATGAACTTGCCTGTTAGAG+AGG + Chr2:69976240-69976259 MsG0280010462.01.T01:intron 45.0%
GCAAGGAGAATGTCAGGATT+TGG + Chr2:69974750-69974769 MsG0280010462.01.T01:intron 45.0%
GCACAAGAAACAATCTGGGA+AGG + Chr2:69977343-69977362 MsG0280010462.01.T01:intron 45.0%
GCGTGTTTGTGCTGTAAACT+AGG + Chr2:69977062-69977081 MsG0280010462.01.T01:intron 45.0%
GCTGCCAGTAAAAACACATG+CGG + Chr2:69974849-69974868 MsG0280010462.01.T01:intron 45.0%
GGAAATGGAGTCACATGTCT+GGG - Chr2:69979148-69979167 None:intergenic 45.0%
GGAGGAAAAGGATGATGTGT+GGG - Chr2:69974284-69974303 None:intergenic 45.0%
GTAATTCTGGTCCATCAACC+AGG + Chr2:69976499-69976518 MsG0280010462.01.T01:intron 45.0%
GTTCTGTGATCTAATCCCCT+AGG + Chr2:69975600-69975619 MsG0280010462.01.T01:intron 45.0%
TGATAAGGAAGCTCTGCCTT+TGG + Chr2:69974553-69974572 MsG0280010462.01.T01:CDS 45.0%
TGGAAGCAAGAAATGCAGTC+TGG + Chr2:69978281-69978300 MsG0280010462.01.T01:CDS 45.0%
TGGAGGAAAAGGATGATGTG+TGG - Chr2:69974285-69974304 None:intergenic 45.0%
TGGGATGGCTAGTAACAAGA+TGG - Chr2:69979424-69979443 None:intergenic 45.0%
TGGTCATATCTCCTGTAGGT+CGG + Chr2:69978011-69978030 MsG0280010462.01.T01:intron 45.0%
TGTGGATCATGGTACCTTTC+AGG - Chr2:69977606-69977625 None:intergenic 45.0%
TTCCGACAAGAACCGAAACA+AGG - Chr2:69978372-69978391 None:intergenic 45.0%
TTGTCCAGACCAATCTTTGG+AGG + Chr2:69979723-69979742 MsG0280010462.01.T01:three_prime_UTR 45.0%
TTTCACAGAGTAAGCTGTGC+AGG + Chr2:69976557-69976576 MsG0280010462.01.T01:intron 45.0%
! AGCCCACACAAGTGACATTT+TGG - Chr2:69975409-69975428 None:intergenic 45.0%
! CAAACCTCCAAAGATTGGTC+TGG - Chr2:69979730-69979749 None:intergenic 45.0%
! CACCTTGTTTCGGTTCTTGT+CGG + Chr2:69978367-69978386 MsG0280010462.01.T01:three_prime_UTR 45.0%
! GTGTGTGGGCTCTTCTTTTA+TGG - Chr2:69976974-69976993 None:intergenic 45.0%
!! GGTGATGGAATTGAACGTTC+TGG + Chr2:69974772-69974791 MsG0280010462.01.T01:CDS 45.0%
!! TATGATGGGTAGAGTGGTCA+AGG - Chr2:69975483-69975502 None:intergenic 45.0%
!! TGCTATAACCTGGTAGTGGT+CGG + Chr2:69975378-69975397 MsG0280010462.01.T01:intron 45.0%
!! TTCGGTTGGTGAGGATGTAT+GGG + Chr2:69974798-69974817 MsG0280010462.01.T01:CDS 45.0%
ATCTGCTGTTGAACCAGGAC+AGG - Chr2:69978443-69978462 None:intergenic 50.0%
CAAACCAAGCTTCAGCATGG+TGG - Chr2:69977520-69977539 None:intergenic 50.0%
CACCATGCTGAAGCTTGGTT+TGG + Chr2:69977518-69977537 MsG0280010462.01.T01:intron 50.0%
CAGGCTGGTATATCTGTGTG+TGG - Chr2:69976989-69977008 None:intergenic 50.0%
CATGAGCAAAACGCCAAAGG+TGG - Chr2:69976788-69976807 None:intergenic 50.0%
CGACAAGAACCGAAACAAGG+TGG - Chr2:69978369-69978388 None:intergenic 50.0%
CGTGCTTCCGAGATATCACA+TGG + Chr2:69978095-69978114 MsG0280010462.01.T01:CDS 50.0%
CTAGCATCTGCTGTTGAACC+AGG - Chr2:69978448-69978467 None:intergenic 50.0%
CTGTGATCTAATCCCCTAGG+TGG + Chr2:69975603-69975622 MsG0280010462.01.T01:intron 50.0%
CTTCCAGATTCGTGCCTCTT+AGG + Chr2:69978221-69978240 MsG0280010462.01.T01:intron 50.0%
GGAGGATAGTAGGTGTCCTA+CGG + Chr2:69976586-69976605 MsG0280010462.01.T01:intron 50.0%
GGGAAATGGAGTCACATGTC+TGG - Chr2:69979149-69979168 None:intergenic 50.0%
GGTCATATCTCCTGTAGGTC+GGG + Chr2:69978012-69978031 MsG0280010462.01.T01:intron 50.0%
GTGGAACTTCATGGCAAGCA+AGG - Chr2:69975855-69975874 None:intergenic 50.0%
TCTTCCACCATGCTGAAGCT+TGG + Chr2:69977513-69977532 MsG0280010462.01.T01:intron 50.0%
TGCCAAACCAAGCTTCAGCA+TGG - Chr2:69977523-69977542 None:intergenic 50.0%
TTAACCGTGGGCCTTCAAAG+TGG + Chr2:69977151-69977170 MsG0280010462.01.T01:intron 50.0%
! ACCTCGTGTGATGGAGGAAA+AGG - Chr2:69974296-69974315 None:intergenic 50.0%
! CTAAGAGGCACGAATCTGGA+AGG - Chr2:69978223-69978242 None:intergenic 50.0%
! TCCTTTTCCTCCATCACACG+AGG + Chr2:69974292-69974311 MsG0280010462.01.T01:CDS 50.0%
! TGCGGTACCTCAGCTTTATC+TGG - Chr2:69977892-69977911 None:intergenic 50.0%
!! CAATGTGTTGACTCCTGTCC+TGG + Chr2:69978427-69978446 MsG0280010462.01.T01:three_prime_UTR 50.0%
!! CGAGTCTATTAGATGGGCTG+AGG + Chr2:69977174-69977193 MsG0280010462.01.T01:intron 50.0%
!! CTTCGGTTGGTGAGGATGTA+TGG + Chr2:69974797-69974816 MsG0280010462.01.T01:CDS 50.0%
ATACCAAGGCTCCTCGGCTA+GGG - Chr2:69974613-69974632 None:intergenic 55.0%
CCAGATTCGTGCCTCTTAGG+TGG + Chr2:69978224-69978243 MsG0280010462.01.T01:intron 55.0%
CTCGGTCAACGGAGTTGCTT+CGG + Chr2:69974583-69974602 MsG0280010462.01.T01:CDS 55.0%
GAACGTTCTGGTGCTTCGGT+TGG + Chr2:69974784-69974803 MsG0280010462.01.T01:CDS 55.0%
GGATTTGTCGGAACCGCCAT+GGG - Chr2:69974215-69974234 None:intergenic 55.0%
TATACCAAGGCTCCTCGGCT+AGG - Chr2:69974614-69974633 None:intergenic 55.0%
TCTGCCTTTGGATTCCGCCT+CGG + Chr2:69974565-69974584 MsG0280010462.01.T01:CDS 55.0%
TGGATTTGTCGGAACCGCCA+TGG - Chr2:69974216-69974235 None:intergenic 55.0%
TTGACCGAGGCGGAATCCAA+AGG - Chr2:69974572-69974591 None:intergenic 55.0%
TTGGATTCCGCCTCGGTCAA+CGG + Chr2:69974572-69974591 MsG0280010462.01.T01:CDS 55.0%
! CCACCTAAGAGGCACGAATC+TGG - Chr2:69978227-69978246 None:intergenic 55.0%
! TTCTGGTGCTTCGGTTGGTG+AGG + Chr2:69974789-69974808 MsG0280010462.01.T01:CDS 55.0%
!! GATTCTGAGGCCCCTTTGGA+TGG + Chr2:69978514-69978533 MsG0280010462.01.T01:intron 55.0%
!! TTGCGATTCTGAGGCCCCTT+TGG + Chr2:69978510-69978529 MsG0280010462.01.T01:intron 55.0%
AGCAACTCCGTTGACCGAGG+CGG - Chr2:69974582-69974601 None:intergenic 60.0%
CACAGCAGTTCCCGACCTAC+AGG - Chr2:69978025-69978044 None:intergenic 60.0%
CGAAGCAACTCCGTTGACCG+AGG - Chr2:69974585-69974604 None:intergenic 60.0%
TGGAGAGACCGACCACTACC+AGG - Chr2:69975389-69975408 None:intergenic 60.0%
! CTCGCCACTTTGAAGGCCCA+CGG - Chr2:69977158-69977177 None:intergenic 60.0%
GAGCTCGAGCACGAGCACGA+TGG + Chr2:69974257-69974276 MsG0280010462.01.T01:CDS 65.0%
GCTTCGGATGACCCTAGCCG+AGG + Chr2:69974599-69974618 MsG0280010462.01.T01:CDS 65.0%
TGACCCTAGCCGAGGAGCCT+TGG + Chr2:69974607-69974626 MsG0280010462.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 69974125 69979825 69974125 ID=MsG0280010462.01;Name=MsG0280010462.01
Chr2 mRNA 69974125 69979825 69974125 ID=MsG0280010462.01.T01;Parent=MsG0280010462.01;Name=MsG0280010462.01.T01;_AED=0.39;_eAED=0.39;_QI=90|0.42|0.5|0.87|0.85|0.75|8|396|248
Chr2 exon 69974125 69974313 69974125 ID=MsG0280010462.01.T01:exon:26803;Parent=MsG0280010462.01.T01
Chr2 exon 69974509 69974628 69974509 ID=MsG0280010462.01.T01:exon:26804;Parent=MsG0280010462.01.T01
Chr2 exon 69974766 69974838 69974766 ID=MsG0280010462.01.T01:exon:26805;Parent=MsG0280010462.01.T01
Chr2 exon 69976303 69976411 69976303 ID=MsG0280010462.01.T01:exon:26806;Parent=MsG0280010462.01.T01
Chr2 exon 69977768 69977903 69977768 ID=MsG0280010462.01.T01:exon:26807;Parent=MsG0280010462.01.T01
Chr2 exon 69978029 69978116 69978029 ID=MsG0280010462.01.T01:exon:26808;Parent=MsG0280010462.01.T01
Chr2 exon 69978228 69978477 69978228 ID=MsG0280010462.01.T01:exon:26809;Parent=MsG0280010462.01.T01
Chr2 exon 69979558 69979825 69979558 ID=MsG0280010462.01.T01:exon:26810;Parent=MsG0280010462.01.T01
Chr2 five_prime_UTR 69974125 69974214 69974125 ID=MsG0280010462.01.T01:five_prime_utr;Parent=MsG0280010462.01.T01
Chr2 CDS 69974215 69974313 69974215 ID=MsG0280010462.01.T01:cds;Parent=MsG0280010462.01.T01
Chr2 CDS 69974509 69974628 69974509 ID=MsG0280010462.01.T01:cds;Parent=MsG0280010462.01.T01
Chr2 CDS 69974766 69974838 69974766 ID=MsG0280010462.01.T01:cds;Parent=MsG0280010462.01.T01
Chr2 CDS 69976303 69976411 69976303 ID=MsG0280010462.01.T01:cds;Parent=MsG0280010462.01.T01
Chr2 CDS 69977768 69977903 69977768 ID=MsG0280010462.01.T01:cds;Parent=MsG0280010462.01.T01
Chr2 CDS 69978029 69978116 69978029 ID=MsG0280010462.01.T01:cds;Parent=MsG0280010462.01.T01
Chr2 CDS 69978228 69978349 69978228 ID=MsG0280010462.01.T01:cds;Parent=MsG0280010462.01.T01
Chr2 three_prime_UTR 69978350 69978477 69978350 ID=MsG0280010462.01.T01:three_prime_utr;Parent=MsG0280010462.01.T01
Chr2 three_prime_UTR 69979558 69979825 69979558 ID=MsG0280010462.01.T01:three_prime_utr;Parent=MsG0280010462.01.T01
Gene Sequence

>MsG0280010462.01.T01

ATGGCGGTTCCGACAAATCCATCCATTGAAGAAGAAGAAGAAGAGCTCGAGCACGAGCACGATGGTCCCACACATCATCCTTTTCCTCCATCACACGAGTTTTTGATTTATCAACAACTGTTGATCCTAGTATATAATCTCCTTGATAAGGAAGCTCTGCCTTTGGATTCCGCCTCGGTCAACGGAGTTGCTTCGGATGACCCTAGCCGAGGAGCCTTGGATTTGGGTGATGGAATTGAACGTTCTGGTGCTTCGGTTGGTGAGGATGTATGGGAAGAATATGGTTGTATTTACTTTGAACTCTTTACTATTGAGGAGTTTTCTCTTGAAAATCTTCAGTTCCTTTCCCATCCTCCTAACAAAGTCTCTAAAGCTCCATCTAAGCTCAAAGCTTATGTTTGGTACTCAGTTCTTGATTTAATTCTTCGTGCTATTGAAGGTCTTTCAGTTATAGATGAACATTCTCAGGAAATATGTTCAAATAAAGAGCTTTTTCATCTTGTATGTGACATGGTCAAGTTTCCAGATAAAGCTGAGGTCGGGAACTGCTGTGTTACTGCCGCAGTTCTTATTGCAAATATTTTGTCTGATGTAGCTGACTACCGTGCTTCCGAGATATCACATGATTCGTGCCTCTTAGGTGGTCTGATTGATATATTTCCTTTTGCTTCGGATGATTGGAAGCAAGAAATGCAGTCTGGAACGTACTTGCTAGAATATTCGTCAGAATACATGAAACTGAAATGA
Protein sequence

>MsG0280010462.01.T01

MAVPTNPSIEEEEEELEHEHDGPTHHPFPPSHEFLIYQQLLILVYNLLDKEALPLDSASVNGVASDDPSRGALDLGDGIERSGASVGEDVWEEYGCIYFELFTIEEFSLENLQFLSHPPNKVSKAPSKLKAYVWYSVLDLILRAIEGLSVIDEHSQEICSNKELFHLVCDMVKFPDKAEVGNCCVTAAVLIANILSDVADYRASEISHDSCLLGGLIDIFPFASDDWKQEMQSGTYLLEYSSEYMKLK*