AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010768.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010768.01.T01 MTR_5g009240 75.362 138 7 3 137 247 249 386 7.84e-56 184
MsG0280010768.01.T01 MTR_5g009240 69.600 125 35 2 1 122 1 125 9.13e-38 137
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010768.01.T01 AT4G23860 50.413 121 56 3 5 122 6 125 2.33e-26 107
MsG0280010768.01.T01 AT4G23860 62.069 58 22 0 189 246 363 420 1.19e-15 76.6
MsG0280010768.01.T01 AT4G23860 50.413 121 56 3 5 122 6 125 2.33e-26 107
MsG0280010768.01.T01 AT4G23860 62.069 58 22 0 189 246 363 420 1.19e-15 76.6
MsG0280010768.01.T01 AT4G23860 50.413 121 56 3 5 122 6 125 2.33e-26 107
MsG0280010768.01.T01 AT4G23860 62.069 58 22 0 189 246 363 420 1.19e-15 76.6
MsG0280010768.01.T01 AT4G23860 62.069 58 22 0 189 246 315 372 8.75e-16 76.6

Find 89 sgRNAs with CRISPR-Local

Find 555 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATTTGAAATCGGAATT+TGG 0.165961 2:-74846711 MsG0280010768.01.T01:five_prime_UTR
TCGAAACCAAGTTAACTTAA+AGG 0.234204 2:+74842111 None:intergenic
ATTGCTTTACCATGTATAAC+TGG 0.263566 2:+74842817 None:intergenic
GCAGGAAGCTGATTTAGTTT+TGG 0.274670 2:-74845009 MsG0280010768.01.T01:intron
TCTAATGGGGCGGGTCTTCC+TGG 0.275327 2:-74842925 MsG0280010768.01.T01:CDS
ATGGATATCAGCAGCAAAAT+TGG 0.279956 2:+74842328 None:intergenic
GTTGAGTTTATTGTCATATC+TGG 0.286326 2:-74842209 MsG0280010768.01.T01:three_prime_UTR
AACTCAACAGTTTGCAAGTT+AGG 0.303184 2:+74842224 None:intergenic
CGGAATTTGGTAAGTAGAAA+TGG 0.312054 2:-74846698 MsG0280010768.01.T01:exon
GGTTCTGAATCTATATCTAA+TGG 0.329862 2:-74842940 MsG0280010768.01.T01:CDS
TTCGTACAATCACAACTTAA+AGG 0.347046 2:-74844244 MsG0280010768.01.T01:intron
GTTCTGAATCTATATCTAAT+GGG 0.367938 2:-74842939 MsG0280010768.01.T01:CDS
ACATTCTCAATATCTTTACT+TGG 0.382845 2:+74844273 None:intergenic
AGAAGAAAAGTTACAGCAAC+AGG 0.389439 2:-74842658 MsG0280010768.01.T01:CDS
CCCGTTCCTCAACTTCTTCA+AGG 0.394586 2:+74846623 None:intergenic
TTGCATGTTAATTGTCTCCT+TGG 0.411300 2:-74842862 MsG0280010768.01.T01:CDS
GTGCTCACCTTCTTCATCTC+TGG 0.419496 2:+74843179 None:intergenic
CAAACTCCAGCATTCCCATC+AGG 0.444490 2:+74844907 None:intergenic
CAGTAACGGAAGAGAGGGTT+TGG 0.450444 2:+74847012 None:intergenic
GAATCGTGAAAATTTGAAAT+CGG 0.450486 2:-74846718 MsG0280010768.01.T01:five_prime_UTR
GGGGTGAGTTTCAGTTGTCT+TGG 0.461319 2:-74842268 MsG0280010768.01.T01:three_prime_UTR
TGTGCAGATTGTGGAAACTA+TGG 0.465724 2:-74844361 MsG0280010768.01.T01:intron
GAGACAATTAACATGCAAAC+TGG 0.468386 2:+74842867 None:intergenic
CCTTGAAGAAGTTGAGGAAC+GGG 0.470276 2:-74846623 MsG0280010768.01.T01:CDS
ACAACAAAGGGTACATGAAA+AGG 0.471788 2:-74844959 MsG0280010768.01.T01:CDS
AAGAATAAGCGGCGCCGTGT+GGG 0.476017 2:-74842288 MsG0280010768.01.T01:three_prime_UTR
TGCATCACGTGCACCCCTGA+TGG 0.482327 2:-74844922 MsG0280010768.01.T01:CDS
CATGATTAAGCCATTCTCTC+AGG 0.484584 2:-74846969 MsG0280010768.01.T01:intron
CTGAGAGAATGGCTTAATCA+TGG 0.501101 2:+74846970 None:intergenic
GTGAGTTTCAGTTGTCTTGG+TGG 0.504492 2:-74842265 MsG0280010768.01.T01:three_prime_UTR
CATTCTCAATATCTTTACTT+GGG 0.507015 2:+74844274 None:intergenic
TGCACCCCTGATGGGAATGC+TGG 0.508072 2:-74844913 MsG0280010768.01.T01:CDS
AGGATGGGCTTCGCACCTCC+TGG 0.511511 2:-74842557 MsG0280010768.01.T01:intron
AAGGTACTCGCCGAGCGTAA+CGG 0.517432 2:+74846642 None:intergenic
AGAAGTTGAGGAACGGGAGC+TGG 0.520781 2:-74846617 MsG0280010768.01.T01:intron
GGCATTGAAGATATGAAGGA+TGG 0.528151 2:-74842573 MsG0280010768.01.T01:CDS
TCGTCTCCTTTAAGTTAACT+TGG 0.529427 2:-74842117 MsG0280010768.01.T01:three_prime_UTR
AGATGCGTTACCTGAGAGAA+TGG 0.533723 2:+74846959 None:intergenic
ACCTTGAAGAAGTTGAGGAA+CGG 0.536931 2:-74846624 MsG0280010768.01.T01:CDS
TGCTCGTTGTCATGCCATGA+TGG 0.537230 2:-74844877 MsG0280010768.01.T01:intron
ATCAAATTTATAAAATGTCT+AGG 0.537298 2:-74840298 MsG0280010768.01.T01:three_prime_UTR
TATCAGCAGCAAAATTGGCT+TGG 0.537944 2:+74842333 None:intergenic
GAAGGGCATTGAAGATATGA+AGG 0.540908 2:-74842577 MsG0280010768.01.T01:CDS
GCATCACGTGCACCCCTGAT+GGG 0.542847 2:-74844921 MsG0280010768.01.T01:CDS
GGGAGTGTACTTACAACAAA+GGG 0.544027 2:-74844971 MsG0280010768.01.T01:CDS
CGAATCTAGTCTAGCAGTAA+CGG 0.548044 2:+74846998 None:intergenic
GCTGCTTCCCCAGTTATACA+TGG 0.550134 2:-74842826 MsG0280010768.01.T01:intron
TTGCTTTACCATGTATAACT+GGG 0.553449 2:+74842818 None:intergenic
GAATCTATATCTAATGGGGC+GGG 0.562536 2:-74842934 MsG0280010768.01.T01:CDS
TCTAGCAGTAACGGAAGAGA+GGG 0.564329 2:+74847007 None:intergenic
TTGATGACATTAAGAATAAG+CGG 0.567586 2:-74842299 MsG0280010768.01.T01:three_prime_UTR
GCAATATTGAGATGTCATCA+AGG 0.569285 2:+74842081 None:intergenic
TAAGAATAAGCGGCGCCGTG+TGG 0.578502 2:-74842289 MsG0280010768.01.T01:three_prime_UTR
CAAAATTGGCTTGGACGAGT+CGG 0.578969 2:+74842342 None:intergenic
AATGGGGCGGGTCTTCCTGG+TGG 0.583552 2:-74842922 MsG0280010768.01.T01:CDS
GTCTAGCAGTAACGGAAGAG+AGG 0.584488 2:+74847006 None:intergenic
AGAGAAAGTCGAGATCTTGA+AGG 0.592258 2:-74842595 MsG0280010768.01.T01:CDS
GGATTGCTTTCTACTTGACA+AGG 0.594287 2:-74842724 MsG0280010768.01.T01:CDS
GGTGGGCCATCCGTTACGCT+CGG 0.596901 2:-74846652 MsG0280010768.01.T01:CDS
TCAGATTCCAGAGATGAAGA+AGG 0.600588 2:-74843186 MsG0280010768.01.T01:intron
TCTGCGTTTGATGATGAAGA+AGG 0.601495 2:-74846673 MsG0280010768.01.T01:CDS
GATGTGGCACAAGCTTCTGT+TGG 0.604749 2:-74842961 MsG0280010768.01.T01:intron
CAATATTGAGATGTCATCAA+GGG 0.605453 2:+74842082 None:intergenic
AAACTCCAGCATTCCCATCA+GGG 0.605816 2:+74844908 None:intergenic
TACTCGCCGAGCGTAACGGA+TGG 0.608509 2:+74846646 None:intergenic
GAACTACCTGATGACCATCA+TGG 0.609707 2:+74844863 None:intergenic
TGGACTGTGGAATTCAAAGT+TGG 0.609910 2:-74844318 MsG0280010768.01.T01:CDS
TGACAAGGAGGACTCAATTG+TGG 0.614397 2:-74842709 MsG0280010768.01.T01:CDS
CAACTGAAACTCACCCCACA+CGG 0.616527 2:+74842274 None:intergenic
AGGGAGTGTACTTACAACAA+AGG 0.617967 2:-74844972 MsG0280010768.01.T01:CDS
GCATTGAAGATATGAAGGAT+GGG 0.621117 2:-74842572 MsG0280010768.01.T01:CDS
AATAGCAGTATATGCACTGA+AGG 0.622459 2:-74842892 MsG0280010768.01.T01:CDS
GAGAAAGTCGAGATCTTGAA+GGG 0.622811 2:-74842594 MsG0280010768.01.T01:CDS
TGAATCTATATCTAATGGGG+CGG 0.622835 2:-74842935 MsG0280010768.01.T01:CDS
AGAATAAGCGGCGCCGTGTG+GGG 0.623176 2:-74842287 MsG0280010768.01.T01:three_prime_UTR
CAAAGGGTACATGAAAAGGC+AGG 0.630016 2:-74844955 MsG0280010768.01.T01:CDS
TGCTTTACCATGTATAACTG+GGG 0.632260 2:+74842819 None:intergenic
GCGTTTGATGATGAAGAAGG+TGG 0.634475 2:-74846670 MsG0280010768.01.T01:CDS
CTGCTATTACAACTTCCACC+AGG 0.635252 2:+74842907 None:intergenic
TTCTGAATCTATATCTAATG+GGG 0.636546 2:-74842938 MsG0280010768.01.T01:CDS
AACTCCAGCATTCCCATCAG+GGG 0.637076 2:+74844909 None:intergenic
AAGAAACTTCAGATGGACTG+TGG 0.638016 2:-74844331 MsG0280010768.01.T01:CDS
AGAAAAGTTACAGCAACAGG+AGG 0.643443 2:-74842655 MsG0280010768.01.T01:CDS
GAAAAGTTACAGCAACAGGA+GGG 0.644096 2:-74842654 MsG0280010768.01.T01:CDS
AAGAAGGTGAGCACTTTACG+AGG 0.648028 2:-74843170 MsG0280010768.01.T01:CDS
CGAGTACCTTGAAGAAGTTG+AGG 0.654992 2:-74846629 MsG0280010768.01.T01:CDS
CGTTTGATGATGAAGAAGGT+GGG 0.682869 2:-74846669 MsG0280010768.01.T01:CDS
TTGCTTTCTACTTGACAAGG+AGG 0.698197 2:-74842721 MsG0280010768.01.T01:CDS
CAGCAACAATATTCACACCA+AGG 0.706552 2:+74842845 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTTAAATAATTAATT+AGG - Chr2:74846933-74846952 MsG0280010768.01.T01:intron 0.0%
!! AAAATAGAAAAAAAACATAA+TGG + Chr2:74842246-74842265 None:intergenic 10.0%
!! AATTGAAAATAAATAGATAA+AGG + Chr2:74840452-74840471 None:intergenic 10.0%
!! AATTTAAATAATTAATTAGG+TGG - Chr2:74846936-74846955 MsG0280010768.01.T01:intron 10.0%
!! ATAAAATATATGATTTAATG+GGG + Chr2:74842589-74842608 None:intergenic 10.0%
!! ATAATCTAATATAATATCAA+AGG + Chr2:74841893-74841912 None:intergenic 10.0%
!!! AAAATTCTGAAAAATTAAAT+GGG - Chr2:74846986-74847005 MsG0280010768.01.T01:five_prime_UTR 10.0%
!!! ATAAGTAACTTTTTAAAAAA+TGG + Chr2:74846883-74846902 None:intergenic 10.0%
!!! TAAAATTCTGAAAAATTAAA+TGG - Chr2:74846985-74847004 MsG0280010768.01.T01:five_prime_UTR 10.0%
!! AAATTGAATAAAAAAGGAAA+AGG + Chr2:74842312-74842331 None:intergenic 15.0%
!! AAATTTCGAAAAACATTATA+TGG + Chr2:74845393-74845412 None:intergenic 15.0%
!! AACTAAAAATTGTATATAAG+GGG + Chr2:74843676-74843695 None:intergenic 15.0%
!! AATGTAGGAAATAATTAATT+AGG + Chr2:74846704-74846723 None:intergenic 15.0%
!! AGAAAATAAAGATAAAATGT+AGG + Chr2:74846719-74846738 None:intergenic 15.0%
!! ATCAAATTTATAAAATGTCT+AGG - Chr2:74847043-74847062 MsG0280010768.01.T01:five_prime_UTR 15.0%
!! ATGCAAAAAATTAAAACAAA+AGG - Chr2:74846300-74846319 MsG0280010768.01.T01:intron 15.0%
!! GAACTAAAAATTGTATATAA+GGG + Chr2:74843677-74843696 None:intergenic 15.0%
!!! AAAATTCTGAGTTTTAAAAT+AGG + Chr2:74845422-74845441 None:intergenic 15.0%
!!! AAATTCTGAAAAATTAAATG+GGG - Chr2:74846987-74847006 MsG0280010768.01.T01:five_prime_UTR 15.0%
!!! AAATTCTGAGTTTTAAAATA+GGG + Chr2:74845421-74845440 None:intergenic 15.0%
!!! AATCATATATTTTATTTGTG+AGG - Chr2:74842594-74842613 MsG0280010768.01.T01:CDS 15.0%
!!! AATGCAATGTTTTTAATTTT+CGG + Chr2:74843340-74843359 None:intergenic 15.0%
!!! ACAAATTTCAAAATTTTACA+TGG + Chr2:74841607-74841626 None:intergenic 15.0%
!!! ACTAGTTTAACTAATTAATT+TGG - Chr2:74843832-74843851 MsG0280010768.01.T01:intron 15.0%
!!! AGTATTTTTAATGCATTTTA+AGG - Chr2:74846739-74846758 MsG0280010768.01.T01:intron 15.0%
!!! ATAATCAGGTAATAATATTT+TGG + Chr2:74842889-74842908 None:intergenic 15.0%
!!! ATGTGATTTTCTAAAATTAT+TGG + Chr2:74841038-74841057 None:intergenic 15.0%
!!! ATTATGTTTTAATCTCTTAA+TGG + Chr2:74846220-74846239 None:intergenic 15.0%
!!! TTAAGTCTTTTTAATAAACT+TGG - Chr2:74844717-74844736 MsG0280010768.01.T01:intron 15.0%
!!! TTCTTTTTCTCTAAATTAAT+GGG + Chr2:74841830-74841849 None:intergenic 15.0%
!!! TTTCTTTTTCTCTAAATTAA+TGG + Chr2:74841831-74841850 None:intergenic 15.0%
!!! TTTTCTTTAAAACAAAGATA+TGG - Chr2:74846082-74846101 MsG0280010768.01.T01:intron 15.0%
!!! TTTTTAATTTGAAGAAAACA+TGG - Chr2:74841635-74841654 MsG0280010768.01.T01:intron 15.0%
!! AATATATTCAATTTGCATTC+TGG - Chr2:74844040-74844059 MsG0280010768.01.T01:intron 20.0%
!! AGAATTATAGAAAATCACAA+TGG + Chr2:74844126-74844145 None:intergenic 20.0%
!! ATATATTACAGATACATGAT+TGG + Chr2:74843987-74844006 None:intergenic 20.0%
!! GGAACTAAAAATTGTATATA+AGG + Chr2:74843678-74843697 None:intergenic 20.0%
!! TAAATATATAAGCTTCATAC+TGG + Chr2:74841666-74841685 None:intergenic 20.0%
!! TAGCAATATAATGATATCTA+AGG + Chr2:74842957-74842976 None:intergenic 20.0%
!! TGATGTTAAAGATAAAGAAT+AGG - Chr2:74841865-74841884 MsG0280010768.01.T01:intron 20.0%
!!! AAATTCCGAGTTTTAAAATA+GGG + Chr2:74845364-74845383 None:intergenic 20.0%
!!! AATATTTCGCTATTACTTTT+TGG - Chr2:74840892-74840911 MsG0280010768.01.T01:intron 20.0%
!!! AATTCTGAAAAATTAAATGG+GGG - Chr2:74846988-74847007 MsG0280010768.01.T01:five_prime_UTR 20.0%
!!! AATTCTGAGTTTTAAAATAG+GGG + Chr2:74845420-74845439 None:intergenic 20.0%
!!! AATTTCACATTTTCATATTG+AGG + Chr2:74846617-74846636 None:intergenic 20.0%
!!! ACTAGTTTTAAAACAATGTT+TGG + Chr2:74843818-74843837 None:intergenic 20.0%
!!! ATATATTTTATTTGTGAGGA+CGG - Chr2:74842598-74842617 MsG0280010768.01.T01:CDS 20.0%
!!! ATATTTCGCTATTACTTTTT+GGG - Chr2:74840893-74840912 MsG0280010768.01.T01:intron 20.0%
!!! ATTTCAAAATTTTACATGGA+AGG + Chr2:74841603-74841622 None:intergenic 20.0%
!!! CTAGTTTTAAAACAATGTTT+GGG + Chr2:74843817-74843836 None:intergenic 20.0%
!!! GGTTATTTCTTTATAAAAAG+CGG - Chr2:74842658-74842677 MsG0280010768.01.T01:CDS 20.0%
!!! GTTTTTTTTTCTGCATTTTA+AGG - Chr2:74846838-74846857 MsG0280010768.01.T01:intron 20.0%
!!! TAAATTCCGAGTTTTAAAAT+AGG + Chr2:74845365-74845384 None:intergenic 20.0%
!!! TAATCCTTAATGTTTTGTTT+TGG + Chr2:74846352-74846371 None:intergenic 20.0%
!!! TATTGTTGTTGAAATAACTT+AGG + Chr2:74846059-74846078 None:intergenic 20.0%
!!! TGTATTGATTTAAATGAGTT+AGG + Chr2:74841542-74841561 None:intergenic 20.0%
!!! TTTTAGGTTTTTGACATTTT+GGG + Chr2:74846117-74846136 None:intergenic 20.0%
! AAATCACAATGGCAAAAATA+AGG + Chr2:74844115-74844134 None:intergenic 25.0%
! AAATGACAATTGAAGATCAT+GGG + Chr2:74843901-74843920 None:intergenic 25.0%
! AAATTACAAGAAATACCAAG+AGG - Chr2:74846414-74846433 MsG0280010768.01.T01:intron 25.0%
! AAGACCAGTTAATAGTTAAA+AGG + Chr2:74842702-74842721 None:intergenic 25.0%
! AATTACAAGAAATACCAAGA+GGG - Chr2:74846415-74846434 MsG0280010768.01.T01:intron 25.0%
! AATTCAGTGTAATTATGTGT+TGG - Chr2:74841058-74841077 MsG0280010768.01.T01:intron 25.0%
! AATTTCGATTCAGTCAAAAT+AGG + Chr2:74845335-74845354 None:intergenic 25.0%
! ACAAAAAAAGAAACTTCAGA+TGG - Chr2:74843003-74843022 MsG0280010768.01.T01:intron 25.0%
! ACAAAAACAACAATTTGATG+TGG - Chr2:74841559-74841578 MsG0280010768.01.T01:intron 25.0%
! ACAGTATATTAAACACAATC+TGG + Chr2:74843377-74843396 None:intergenic 25.0%
! ACATTCTCAATATCTTTACT+TGG + Chr2:74843071-74843090 None:intergenic 25.0%
! AGTACTTTGGATTGAATTAT+CGG - Chr2:74842515-74842534 MsG0280010768.01.T01:intron 25.0%
! ATAAATAGATTAGAGAAGAC+TGG + Chr2:74843273-74843292 None:intergenic 25.0%
! ATAACATGTCGAATAAAATC+AGG + Chr2:74842821-74842840 None:intergenic 25.0%
! ATCAAACTGGATTAATAATC+AGG + Chr2:74842903-74842922 None:intergenic 25.0%
! ATGTGAAATTTAATGAAGCA+CGG - Chr2:74846627-74846646 MsG0280010768.01.T01:CDS 25.0%
! ATTATATCCTGAGGTAATAT+TGG - Chr2:74844236-74844255 MsG0280010768.01.T01:intron 25.0%
! ATTTCGATTCAGTCAAAATA+GGG + Chr2:74845334-74845353 None:intergenic 25.0%
! CAAATTAGAGTCATTAAACA+AGG + Chr2:74844941-74844960 None:intergenic 25.0%
! CAACATAGATTAGATTAGAT+TGG - Chr2:74843615-74843634 MsG0280010768.01.T01:intron 25.0%
! CAATATTCCTTTCCAAAAAT+TGG - Chr2:74844543-74844562 MsG0280010768.01.T01:intron 25.0%
! CAATTGTCTTTGATTATGTT+GGG + Chr2:74846470-74846489 None:intergenic 25.0%
! CATTCTCAATATCTTTACTT+GGG + Chr2:74843070-74843089 None:intergenic 25.0%
! GTAAAAAGTTCATACAAGTT+GGG + Chr2:74845187-74845206 None:intergenic 25.0%
! GTAATTTATTGCGTTACATT+TGG + Chr2:74846401-74846420 None:intergenic 25.0%
! GTAGGAAATAATTAATTAGG+TGG + Chr2:74846701-74846720 None:intergenic 25.0%
! TAACATGTCGAATAAAATCA+GGG + Chr2:74842820-74842839 None:intergenic 25.0%
! TAATTCTCCTAAAATTGATG+TGG - Chr2:74844364-74844383 MsG0280010768.01.T01:intron 25.0%
! TATAAGGAACAATTGTAATC+TGG - Chr2:74842188-74842207 MsG0280010768.01.T01:three_prime_UTR 25.0%
! TCAATTGTCTTTGATTATGT+TGG + Chr2:74846471-74846490 None:intergenic 25.0%
! TCCTGCAAATTGAATAAAAA+AGG + Chr2:74842318-74842337 None:intergenic 25.0%
! TGTAAAAAGTTCATACAAGT+TGG + Chr2:74845188-74845207 None:intergenic 25.0%
! TGTAAAATTGAAGACTATAC+AGG + Chr2:74842046-74842065 None:intergenic 25.0%
! TGTAAATGTTGTTAAATGGT+GGG - Chr2:74841939-74841958 MsG0280010768.01.T01:intron 25.0%
! TGTTGCAATTGAAAAGATAT+AGG + Chr2:74841974-74841993 None:intergenic 25.0%
! TTAAAACAAAGATATGGTCA+TGG - Chr2:74846088-74846107 MsG0280010768.01.T01:intron 25.0%
! TTAATGTCATCAAAAACTGA+TGG + Chr2:74845035-74845054 None:intergenic 25.0%
! TTATATCCTGAGGTAATATT+GGG - Chr2:74844237-74844256 MsG0280010768.01.T01:intron 25.0%
! TTCGAAAAACATTATATGGA+GGG + Chr2:74845389-74845408 None:intergenic 25.0%
! TTCTGAATCTATATCTAATG+GGG - Chr2:74844403-74844422 MsG0280010768.01.T01:intron 25.0%
! TTTCGAAAAACATTATATGG+AGG + Chr2:74845390-74845409 None:intergenic 25.0%
!! AATGTGTTGTGTTGTATTTT+AGG - Chr2:74840597-74840616 MsG0280010768.01.T01:intron 25.0%
!! ACTTGTATGAACTTTTTACA+TGG - Chr2:74845188-74845207 MsG0280010768.01.T01:intron 25.0%
!! AGATTTTTCTGTAAGTATGA+AGG - Chr2:74845719-74845738 MsG0280010768.01.T01:intron 25.0%
!! ATTCTGAAAAATTAAATGGG+GGG - Chr2:74846989-74847008 MsG0280010768.01.T01:five_prime_UTR 25.0%
!! ATTGATTTAAATGAGTTAGG+TGG + Chr2:74841539-74841558 None:intergenic 25.0%
!! GAAAATTTGAAATCGGAATT+TGG - Chr2:74840630-74840649 MsG0280010768.01.T01:intron 25.0%
!! GAATCGTGAAAATTTGAAAT+CGG - Chr2:74840623-74840642 MsG0280010768.01.T01:intron 25.0%
!! GTTCTGAATCTATATCTAAT+GGG - Chr2:74844402-74844421 MsG0280010768.01.T01:intron 25.0%
!! TCTATTTTCCAACATTCTAA+AGG + Chr2:74845702-74845721 None:intergenic 25.0%
!! TTGATGACATTAAGAATAAG+CGG - Chr2:74845042-74845061 MsG0280010768.01.T01:intron 25.0%
!! TTGCTGAATAGTTTGAAATT+TGG + Chr2:74846246-74846265 None:intergenic 25.0%
!!! AACTGGTCTTTTATAACTTT+CGG - Chr2:74842712-74842731 MsG0280010768.01.T01:CDS 25.0%
!!! AATTCCGAGTTTTAAAATAG+GGG + Chr2:74845363-74845382 None:intergenic 25.0%
!!! ATTCTGAGTTTTAAAATAGG+GGG + Chr2:74845419-74845438 None:intergenic 25.0%
!!! ATTTGTGTTGATTTTTTGTC+AGG + Chr2:74846581-74846600 None:intergenic 25.0%
!!! GTCACAAATCATTACTTTTT+CGG + Chr2:74846004-74846023 None:intergenic 25.0%
!!! GTTTTAGGTTTTTGACATTT+TGG + Chr2:74846118-74846137 None:intergenic 25.0%
!!! TATTTCGCTATTACTTTTTG+GGG - Chr2:74840894-74840913 MsG0280010768.01.T01:intron 25.0%
!!! TCCTTTTTTATTCAATTTGC+AGG - Chr2:74842314-74842333 MsG0280010768.01.T01:three_prime_UTR 25.0%
!!! TTAATCCAGTTTGATTTTGA+TGG - Chr2:74842908-74842927 MsG0280010768.01.T01:CDS 25.0%
!!! TTAGAATTTTGATAAAGCAG+AGG + Chr2:74845520-74845539 None:intergenic 25.0%
!!! TTTGTGTTGATTTTTTGTCA+GGG + Chr2:74846580-74846599 None:intergenic 25.0%
AAAGAGTTCTCCAATAATGA+TGG - Chr2:74843931-74843950 MsG0280010768.01.T01:intron 30.0%
AAAGTTACTAAGGCTATGTT+TGG - Chr2:74843430-74843449 MsG0280010768.01.T01:intron 30.0%
AACCCAGAGAACAATATAAA+AGG + Chr2:74841244-74841263 None:intergenic 30.0%
AAGAAAAATAAATCAGCTCG+AGG - Chr2:74845959-74845978 MsG0280010768.01.T01:intron 30.0%
AAGTTACTAAGGCTATGTTT+GGG - Chr2:74843431-74843450 MsG0280010768.01.T01:intron 30.0%
AATACAAAATCCCCTAATCT+GGG + Chr2:74843701-74843720 None:intergenic 30.0%
AATAGATGGATACTTCTTCA+TGG - Chr2:74844915-74844934 MsG0280010768.01.T01:CDS 30.0%
AATATGAAACACACACACAA+CGG + Chr2:74841709-74841728 None:intergenic 30.0%
AATTGTATATAAGGGGAGTT+TGG + Chr2:74843669-74843688 None:intergenic 30.0%
ACCCAGAGAACAATATAAAA+GGG + Chr2:74841243-74841262 None:intergenic 30.0%
AGAAAAATAAATCAGCTCGA+GGG - Chr2:74845960-74845979 MsG0280010768.01.T01:intron 30.0%
AGGACCAAAACAAAACATTA+AGG - Chr2:74846345-74846364 MsG0280010768.01.T01:intron 30.0%
AGGTGGATAATAAGATAATG+TGG - Chr2:74846953-74846972 MsG0280010768.01.T01:intron 30.0%
ATAAGCCATCAAAATCAAAC+TGG + Chr2:74842916-74842935 None:intergenic 30.0%
ATAATAAGATAATGTGGTGG+AGG - Chr2:74846959-74846978 MsG0280010768.01.T01:intron 30.0%
ATACCAAGATACACTATACA+TGG - Chr2:74846490-74846509 MsG0280010768.01.T01:intron 30.0%
ATTCCATGTATAGTGTATCT+TGG + Chr2:74846496-74846515 None:intergenic 30.0%
ATTCGACATGTTATAGTGAT+GGG - Chr2:74842827-74842846 MsG0280010768.01.T01:CDS 30.0%
ATTGCTTTACCATGTATAAC+TGG + Chr2:74844527-74844546 None:intergenic 30.0%
ATTGTTATCAAGCTTTGCTA+GGG + Chr2:74844023-74844042 None:intergenic 30.0%
CAAGTACAAGGAAAAGAATT+GGG + Chr2:74845784-74845803 None:intergenic 30.0%
CAATATTGAGATGTCATCAA+GGG + Chr2:74845262-74845281 None:intergenic 30.0%
CATGAAGGATCAATAAAGTA+TGG + Chr2:74845871-74845890 None:intergenic 30.0%
CCAAAACATTCAGAAACATT+AGG - Chr2:74846325-74846344 MsG0280010768.01.T01:intron 30.0%
CTGTAAATGTTGTTAAATGG+TGG - Chr2:74841938-74841957 MsG0280010768.01.T01:intron 30.0%
GAAACAACAACCATCATTAT+TGG + Chr2:74843944-74843963 None:intergenic 30.0%
GAAATGACAATTGAAGATCA+TGG + Chr2:74843902-74843921 None:intergenic 30.0%
GATAGATCTTAAAACATACC+AGG - Chr2:74846168-74846187 MsG0280010768.01.T01:intron 30.0%
GGACTGTAAATGTTGTTAAA+TGG - Chr2:74841935-74841954 MsG0280010768.01.T01:intron 30.0%
GTAAATGTTGTTAAATGGTG+GGG - Chr2:74841940-74841959 MsG0280010768.01.T01:intron 30.0%
GTTGAGTTTATTGTCATATC+TGG - Chr2:74845132-74845151 MsG0280010768.01.T01:intron 30.0%
TAAATGTTGTTAAATGGTGG+GGG - Chr2:74841941-74841960 MsG0280010768.01.T01:intron 30.0%
TAATACAAAATCCCCTAATC+TGG + Chr2:74843702-74843721 None:intergenic 30.0%
TAGAACTGTATCATTACTTG+TGG - Chr2:74840782-74840801 MsG0280010768.01.T01:intron 30.0%
TAGTAACTTTCAGAGATTTG+TGG + Chr2:74843420-74843439 None:intergenic 30.0%
TATATGTTATGTTTCACGAC+AGG - Chr2:74844970-74844989 MsG0280010768.01.T01:CDS 30.0%
TATGCAAATGCAAGAATGTT+TGG - Chr2:74844576-74844595 MsG0280010768.01.T01:intron 30.0%
TATTCGACATGTTATAGTGA+TGG - Chr2:74842826-74842845 MsG0280010768.01.T01:intron 30.0%
TATTGTTATCAAGCTTTGCT+AGG + Chr2:74844024-74844043 None:intergenic 30.0%
TCGAAAAACATTATATGGAG+GGG + Chr2:74845388-74845407 None:intergenic 30.0%
TCGAAACCAAGTTAACTTAA+AGG + Chr2:74845233-74845252 None:intergenic 30.0%
TGGAAAGAAAATAGAGCTTT+GGG + Chr2:74843755-74843774 None:intergenic 30.0%
TGGAATATTATCATCAGAAG+CGG - Chr2:74844596-74844615 MsG0280010768.01.T01:intron 30.0%
TGGATAATAAGATAATGTGG+TGG - Chr2:74846956-74846975 MsG0280010768.01.T01:intron 30.0%
TTCCTTATAAAGCTAGATCT+CGG + Chr2:74842177-74842196 None:intergenic 30.0%
TTCGTACAATCACAACTTAA+AGG - Chr2:74843097-74843116 MsG0280010768.01.T01:intron 30.0%
TTGCTTTACCATGTATAACT+GGG + Chr2:74844526-74844545 None:intergenic 30.0%
TTGGGTCATTATAGAATTGT+CGG + Chr2:74846551-74846570 None:intergenic 30.0%
TTTATTGCGTTACATTTGGT+TGG + Chr2:74846397-74846416 None:intergenic 30.0%
TTTCGATTCAGTCAAAATAG+GGG + Chr2:74845333-74845352 None:intergenic 30.0%
! ACAATTTCACGGATTGAATT+GGG - Chr2:74845638-74845657 MsG0280010768.01.T01:intron 30.0%
! ACCCCCAATTTAATGTTTTT+CGG - Chr2:74845444-74845463 MsG0280010768.01.T01:intron 30.0%
! AGAATTAACTCGTTTTGCAA+AGG + Chr2:74840531-74840550 None:intergenic 30.0%
! CAAATCTCTGAAAGTTACTA+AGG - Chr2:74843420-74843439 MsG0280010768.01.T01:intron 30.0%
! CAATATTTTCGTCGAATCTA+GGG - Chr2:74840476-74840495 MsG0280010768.01.T01:intron 30.0%
! TAACCATTTTATTGCTGCTA+TGG - Chr2:74841914-74841933 MsG0280010768.01.T01:intron 30.0%
! TAATAAGATAATGTGGTGGA+GGG - Chr2:74846960-74846979 MsG0280010768.01.T01:intron 30.0%
! TCAATATTTTCGTCGAATCT+AGG - Chr2:74840475-74840494 MsG0280010768.01.T01:intron 30.0%
! TCCCTTTTATATTGTTCTCT+GGG - Chr2:74841239-74841258 MsG0280010768.01.T01:intron 30.0%
! TTCCCTTTTATATTGTTCTC+TGG - Chr2:74841238-74841257 MsG0280010768.01.T01:intron 30.0%
! TTCTGAAAAATTAAATGGGG+GGG - Chr2:74846990-74847009 MsG0280010768.01.T01:five_prime_UTR 30.0%
! TTTAAGATCTATCACCATGT+AGG + Chr2:74846161-74846180 None:intergenic 30.0%
! TTTTCAATTGCAACAAAAGC+AGG - Chr2:74841979-74841998 MsG0280010768.01.T01:intron 30.0%
! TTTTGCAAAGGATATTACGA+AGG + Chr2:74840519-74840538 None:intergenic 30.0%
!! ACTAATTAATTTGGTGCCAT+TGG - Chr2:74843841-74843860 MsG0280010768.01.T01:intron 30.0%
!! ATTTTCCAACATTCTAAAGG+AGG + Chr2:74845699-74845718 None:intergenic 30.0%
!! CCTAATGTTTCTGAATGTTT+TGG + Chr2:74846328-74846347 None:intergenic 30.0%
!! CTTTCTGAAATTATATCCTG+AGG - Chr2:74844227-74844246 MsG0280010768.01.T01:intron 30.0%
!! GGTTCTGAATCTATATCTAA+TGG - Chr2:74844401-74844420 MsG0280010768.01.T01:intron 30.0%
!! GTCACCTTTTAACTATTAAC+TGG - Chr2:74842695-74842714 MsG0280010768.01.T01:CDS 30.0%
!!! ATTCCGAGTTTTAAAATAGG+GGG + Chr2:74845362-74845381 None:intergenic 30.0%
AAAAGGGAAACTTAGCTTCT+AGG + Chr2:74841227-74841246 None:intergenic 35.0%
AACTCAACAGTTTGCAAGTT+AGG + Chr2:74845120-74845139 None:intergenic 35.0%
AACTTTCGGTAGTGTATCTT+GGG - Chr2:74842726-74842745 MsG0280010768.01.T01:CDS 35.0%
AATAGCAGTATATGCACTGA+AGG - Chr2:74844449-74844468 MsG0280010768.01.T01:intron 35.0%
AATGCTGTCTTCAAGAAATG+AGG - Chr2:74845290-74845309 MsG0280010768.01.T01:intron 35.0%
AATTAGGTGGATAACAGTGT+CGG + Chr2:74846688-74846707 None:intergenic 35.0%
AATTTAATGAAGCACGGACA+CGG - Chr2:74846633-74846652 MsG0280010768.01.T01:CDS 35.0%
AGAAGAAAAGTTACAGCAAC+AGG - Chr2:74844683-74844702 MsG0280010768.01.T01:intron 35.0%
AGAGGATCTGATTGATACAA+AGG + Chr2:74845502-74845521 None:intergenic 35.0%
AGGGCCGAAAAACATTAAAT+TGG + Chr2:74845451-74845470 None:intergenic 35.0%
AGTCCATAGCAGCAATAAAA+TGG + Chr2:74841920-74841939 None:intergenic 35.0%
ATAAAGGAGAAATCACCGTT+AGG + Chr2:74840436-74840455 None:intergenic 35.0%
ATACAAAATCCCCTAATCTG+GGG + Chr2:74843700-74843719 None:intergenic 35.0%
ATGGATATCAGCAGCAAAAT+TGG + Chr2:74845016-74845035 None:intergenic 35.0%
CAATTTCAGGGAAGATAATG+TGG + Chr2:74845477-74845496 None:intergenic 35.0%
CAATTTGCATTCTGGTATGA+TGG - Chr2:74844048-74844067 MsG0280010768.01.T01:intron 35.0%
CATAAGCTGTATTACTTAGC+TGG - Chr2:74842211-74842230 MsG0280010768.01.T01:three_prime_UTR 35.0%
CATGTCATATATTGAGTGCA+AGG + Chr2:74842782-74842801 None:intergenic 35.0%
CGGAATTTGGTAAGTAGAAA+TGG - Chr2:74840643-74840662 MsG0280010768.01.T01:intron 35.0%
GAGACAATTAACATGCAAAC+TGG + Chr2:74844477-74844496 None:intergenic 35.0%
GAGGATCTGATTGATACAAA+GGG + Chr2:74845501-74845520 None:intergenic 35.0%
GATACAAAGGGACAATTTCA+GGG + Chr2:74845489-74845508 None:intergenic 35.0%
GATACTAGTGCACAATTTCA+CGG - Chr2:74845627-74845646 MsG0280010768.01.T01:intron 35.0%
GCAAGTACAAGGAAAAGAAT+TGG + Chr2:74845785-74845804 None:intergenic 35.0%
GCAATATTGAGATGTCATCA+AGG + Chr2:74845263-74845282 None:intergenic 35.0%
GCATTGAAGATATGAAGGAT+GGG - Chr2:74844769-74844788 MsG0280010768.01.T01:intron 35.0%
GCCGAAAAACATTAAATTGG+GGG + Chr2:74845448-74845467 None:intergenic 35.0%
GGAAAGAAAATAGAGCTTTG+GGG + Chr2:74843754-74843773 None:intergenic 35.0%
GGCCGAAAAACATTAAATTG+GGG + Chr2:74845449-74845468 None:intergenic 35.0%
GGCTTGTAAAAAAAAGGAAG+TGG + Chr2:74843775-74843794 None:intergenic 35.0%
GGGCCGAAAAACATTAAATT+GGG + Chr2:74845450-74845469 None:intergenic 35.0%
GTCTTTGATTATGTTGGGAA+GGG + Chr2:74846465-74846484 None:intergenic 35.0%
GTGGAAAGAAAATAGAGCTT+TGG + Chr2:74843756-74843775 None:intergenic 35.0%
TAAAGGAGAAATCACCGTTA+GGG + Chr2:74840435-74840454 None:intergenic 35.0%
TAAATGAGTTAGGTGGTGTA+TGG + Chr2:74841532-74841551 None:intergenic 35.0%
TAACTTTCGGTAGTGTATCT+TGG - Chr2:74842725-74842744 MsG0280010768.01.T01:CDS 35.0%
TAATCTGAACCTCGTAGATT+CGG - Chr2:74840820-74840839 MsG0280010768.01.T01:intron 35.0%
TATGTTCAAAATGCACTTGC+AGG + Chr2:74841762-74841781 None:intergenic 35.0%
TCACCATGTAGGTTAAAAGT+CGG + Chr2:74846150-74846169 None:intergenic 35.0%
TCCTTGTACTTGCACAAAAT+TGG - Chr2:74845792-74845811 MsG0280010768.01.T01:intron 35.0%
TCTATTTGTTCTTCAGCATC+TGG + Chr2:74843157-74843176 None:intergenic 35.0%
TCTCTCAACAATTTCCCTAA+CGG - Chr2:74840418-74840437 MsG0280010768.01.T01:intron 35.0%
TCTGAAAAATTAAATGGGGG+GGG - Chr2:74846991-74847010 MsG0280010768.01.T01:five_prime_UTR 35.0%
TGAATCTATATCTAATGGGG+CGG - Chr2:74844406-74844425 MsG0280010768.01.T01:intron 35.0%
TGATACAAAGGGACAATTTC+AGG + Chr2:74845490-74845509 None:intergenic 35.0%
TGCTTTACCATGTATAACTG+GGG + Chr2:74844525-74844544 None:intergenic 35.0%
TGGGTCATTATAGAATTGTC+GGG + Chr2:74846550-74846569 None:intergenic 35.0%
TGTCTTTGATTATGTTGGGA+AGG + Chr2:74846466-74846485 None:intergenic 35.0%
TTCGATTCAGTCAAAATAGG+GGG + Chr2:74845332-74845351 None:intergenic 35.0%
TTGCATGTTAATTGTCTCCT+TGG - Chr2:74844479-74844498 MsG0280010768.01.T01:intron 35.0%
TTGTTAAGCAAACTCACAAC+TGG + Chr2:74840874-74840893 None:intergenic 35.0%
TTTACGAGGATTCTTGTGTA+AGG - Chr2:74844185-74844204 MsG0280010768.01.T01:intron 35.0%
TTTCAAAACAGCAATCAGTC+TGG - Chr2:74845554-74845573 MsG0280010768.01.T01:intron 35.0%
TTTCCTTGACTCTAGTACTT+TGG - Chr2:74842502-74842521 MsG0280010768.01.T01:intron 35.0%
! AATAAGATAATGTGGTGGAG+GGG - Chr2:74846961-74846980 MsG0280010768.01.T01:intron 35.0%
! AATCCAAAGTACTAGAGTCA+AGG + Chr2:74842508-74842527 None:intergenic 35.0%
! ACAACAAAGGGTACATGAAA+AGG - Chr2:74842382-74842401 MsG0280010768.01.T01:intron 35.0%
! ATTATATGAAGTATCCCCAG+TGG + Chr2:74844348-74844367 None:intergenic 35.0%
! ATTGGAGAACTCTTTTCGAA+GGG + Chr2:74843926-74843945 None:intergenic 35.0%
! CACAATTTCACGGATTGAAT+TGG - Chr2:74845637-74845656 MsG0280010768.01.T01:intron 35.0%
! CTTCATGATTTTCCCTTTTC+CGG - Chr2:74845884-74845903 MsG0280010768.01.T01:intron 35.0%
! GAAAGAAAATAGAGCTTTGG+GGG + Chr2:74843753-74843772 None:intergenic 35.0%
! GCAATGCATTTGTTTCGTTT+TGG + Chr2:74846031-74846050 None:intergenic 35.0%
! GTGTAATTATGTGTTGGTGT+TGG - Chr2:74841064-74841083 MsG0280010768.01.T01:intron 35.0%
! TATTGGAGAACTCTTTTCGA+AGG + Chr2:74843927-74843946 None:intergenic 35.0%
! TCAAAACCGTTTTGTACCAA+TGG + Chr2:74843860-74843879 None:intergenic 35.0%
! TCGTCTCCTTTAAGTTAACT+TGG - Chr2:74845224-74845243 MsG0280010768.01.T01:intron 35.0%
! TTACTGCTGTACAATTTTCC+TGG + Chr2:74846189-74846208 None:intergenic 35.0%
! TTTTTGTCAGGGACTGAATT+GGG + Chr2:74846569-74846588 None:intergenic 35.0%
!! AACAATGTTTGGGACTTTTG+AGG + Chr2:74843807-74843826 None:intergenic 35.0%
!! ACAATGTTTGGGACTTTTGA+GGG + Chr2:74843806-74843825 None:intergenic 35.0%
!! ACGGTTTTGACCTTTTATTG+TGG - Chr2:74843870-74843889 MsG0280010768.01.T01:intron 35.0%
!! CATCTCTCCAATTTTTGGAA+AGG + Chr2:74844553-74844572 None:intergenic 35.0%
!! GAATACCTCCTTTAGAATGT+TGG - Chr2:74845691-74845710 MsG0280010768.01.T01:intron 35.0%
!! GGCTGTTCTGAAAAGAATTT+AGG - Chr2:74842637-74842656 MsG0280010768.01.T01:CDS 35.0%
!! GGTTTGTTTGCTATTTACGA+TGG + Chr2:74845763-74845782 None:intergenic 35.0%
!! TAGAGCATCTCTCCAATTTT+TGG + Chr2:74844558-74844577 None:intergenic 35.0%
!!! AGGAAGCTGATTTAGTTTTG+GGG - Chr2:74842334-74842353 MsG0280010768.01.T01:exon 35.0%
!!! AGTTGTCTTGGTGGTTTTAA+AGG - Chr2:74845085-74845104 MsG0280010768.01.T01:intron 35.0%
!!! ATTTTTAGTTCCCCCAGATT+AGG - Chr2:74843686-74843705 MsG0280010768.01.T01:intron 35.0%
!!! CAGGAAGCTGATTTAGTTTT+GGG - Chr2:74842333-74842352 MsG0280010768.01.T01:exon 35.0%
!!! TTCCGAGTTTTAAAATAGGG+GGG + Chr2:74845361-74845380 None:intergenic 35.0%
!!! TTTTTAGTTCCCCCAGATTA+GGG - Chr2:74843687-74843706 MsG0280010768.01.T01:intron 35.0%
!!! TTTTTTGTCAGGGACTGAAT+TGG + Chr2:74846570-74846589 None:intergenic 35.0%
AATGACAAGCGGCAAGAATT+CGG + Chr2:74841793-74841812 None:intergenic 40.0%
ACAACTGGTCAATTGAAGCT+CGG + Chr2:74840859-74840878 None:intergenic 40.0%
ACCTTGAAGAAGTTGAGGAA+CGG - Chr2:74840717-74840736 MsG0280010768.01.T01:intron 40.0%
ACGGATAAGTTCCATGTGAT+GGG - Chr2:74841347-74841366 MsG0280010768.01.T01:intron 40.0%
AGAAAAGAGAACATACCAGG+AGG + Chr2:74844802-74844821 None:intergenic 40.0%
AGAAAAGTTACAGCAACAGG+AGG - Chr2:74844686-74844705 MsG0280010768.01.T01:intron 40.0%
AGAATTGTCGGGACTGAATT+GGG + Chr2:74846539-74846558 None:intergenic 40.0%
AGAGAAAGTCGAGATCTTGA+AGG - Chr2:74844746-74844765 MsG0280010768.01.T01:intron 40.0%
AGGGAAGATAATGTGGTAGA+GGG + Chr2:74845470-74845489 None:intergenic 40.0%
ATGAAGCACGGATATGAACA+CGG - Chr2:74840974-74840993 MsG0280010768.01.T01:intron 40.0%
ATGGGCAAGACCACAATAAA+AGG + Chr2:74843883-74843902 None:intergenic 40.0%
ATGGTTTCACCCTAGTGAAA+GGG + Chr2:74845852-74845871 None:intergenic 40.0%
CAGCAACAATATTCACACCA+AGG + Chr2:74844499-74844518 None:intergenic 40.0%
CATGATTAAGCCATTCTCTC+AGG - Chr2:74840372-74840391 MsG0280010768.01.T01:intron 40.0%
CGAATCTAGTCTAGCAGTAA+CGG + Chr2:74840346-74840365 None:intergenic 40.0%
CGGAAAAGGGAAAATCATGA+AGG + Chr2:74845886-74845905 None:intergenic 40.0%
CTATGTTTGGGAGTTTGAAG+GGG - Chr2:74843443-74843462 MsG0280010768.01.T01:intron 40.0%
CTGAAAAATTAAATGGGGGG+GGG - Chr2:74846992-74847011 MsG0280010768.01.T01:five_prime_UTR 40.0%
CTGAGAGAATGGCTTAATCA+TGG + Chr2:74840374-74840393 None:intergenic 40.0%
CTTGCACAAAATTGGCAACA+TGG - Chr2:74845800-74845819 MsG0280010768.01.T01:intron 40.0%
GAAAAGTTACAGCAACAGGA+GGG - Chr2:74844687-74844706 MsG0280010768.01.T01:intron 40.0%
GAATCTATATCTAATGGGGC+GGG - Chr2:74844407-74844426 MsG0280010768.01.T01:intron 40.0%
GAGAAAGTCGAGATCTTGAA+GGG - Chr2:74844747-74844766 MsG0280010768.01.T01:intron 40.0%
GAGTGAGAATATGTAACAGC+TGG + Chr2:74844093-74844112 None:intergenic 40.0%
GCTATGTTTGGGAGTTTGAA+GGG - Chr2:74843442-74843461 MsG0280010768.01.T01:intron 40.0%
GGATTGCTTTCTACTTGACA+AGG - Chr2:74844617-74844636 MsG0280010768.01.T01:intron 40.0%
GTAAAGATCCCTTGGTGAAA+TGG + Chr2:74841426-74841445 None:intergenic 40.0%
GTATATAAGGGGAGTTTGGA+AGG + Chr2:74843665-74843684 None:intergenic 40.0%
TACAAAATCCCCTAATCTGG+GGG + Chr2:74843699-74843718 None:intergenic 40.0%
TACGGATAAGTTCCATGTGA+TGG - Chr2:74841346-74841365 MsG0280010768.01.T01:intron 40.0%
TAGAATTGTCGGGACTGAAT+TGG + Chr2:74846540-74846559 None:intergenic 40.0%
TATCAGCAGCAAAATTGGCT+TGG + Chr2:74845011-74845030 None:intergenic 40.0%
TATGACATGTAATCTGTGCC+TGG - Chr2:74842793-74842812 MsG0280010768.01.T01:intron 40.0%
TATGGTTTCACCCTAGTGAA+AGG + Chr2:74845853-74845872 None:intergenic 40.0%
TCAGATTCCAGAGATGAAGA+AGG - Chr2:74844155-74844174 MsG0280010768.01.T01:intron 40.0%
TCATCAGCACAAATGACAAG+CGG + Chr2:74841804-74841823 None:intergenic 40.0%
TCCAATTTACCGAATCTACG+AGG + Chr2:74840832-74840851 None:intergenic 40.0%
TCGATTCAGTCAAAATAGGG+GGG + Chr2:74845331-74845350 None:intergenic 40.0%
TCTGGGTTTCATGAGTTTCT+GGG - Chr2:74841256-74841275 MsG0280010768.01.T01:intron 40.0%
TGAAAAATTAAATGGGGGGG+GGG - Chr2:74846993-74847012 MsG0280010768.01.T01:five_prime_UTR 40.0%
TGCAGAAAAGAGAACATACC+AGG + Chr2:74844805-74844824 None:intergenic 40.0%
TGGACTGTGGAATTCAAAGT+TGG - Chr2:74843023-74843042 MsG0280010768.01.T01:intron 40.0%
TGTGCAGATTGTGGAAACTA+TGG - Chr2:74842980-74842999 MsG0280010768.01.T01:intron 40.0%
TTGCTATGTTGTGCAGATTG+TGG - Chr2:74842971-74842990 MsG0280010768.01.T01:intron 40.0%
TTGCTTTCTACTTGACAAGG+AGG - Chr2:74844620-74844639 MsG0280010768.01.T01:intron 40.0%
! ACCTCGTAGATTCGGTAAAT+TGG - Chr2:74840828-74840847 MsG0280010768.01.T01:intron 40.0%
! AGGGAGTGTACTTACAACAA+AGG - Chr2:74842369-74842388 MsG0280010768.01.T01:intron 40.0%
! AGTCGGCTGTACAAAGTTTT+AGG + Chr2:74846133-74846152 None:intergenic 40.0%
! ATAAGATAATGTGGTGGAGG+GGG - Chr2:74846962-74846981 MsG0280010768.01.T01:intron 40.0%
! ATCTGGAATAGCTTGAGTAG+TGG - Chr2:74842863-74842882 MsG0280010768.01.T01:CDS 40.0%
! ATTTTCAGACCCACAAGTTG+AGG + Chr2:74844325-74844344 None:intergenic 40.0%
! GCCAATTTTGTGCAAGTACA+AGG + Chr2:74845796-74845815 None:intergenic 40.0%
! GCTTGTGCCACATCAATTTT+AGG + Chr2:74844374-74844393 None:intergenic 40.0%
! GGAAGGTATGAAAGCAATCT+AGG + Chr2:74841586-74841605 None:intergenic 40.0%
! GGCATTGAAGATATGAAGGA+TGG - Chr2:74844768-74844787 MsG0280010768.01.T01:intron 40.0%
! GGGAGTGTACTTACAACAAA+GGG - Chr2:74842370-74842389 MsG0280010768.01.T01:intron 40.0%
! GGGGATGGCTTGTAAAAAAA+AGG + Chr2:74843781-74843800 None:intergenic 40.0%
! TCGCATTTTCGATAAAGCGT+AGG - Chr2:74845597-74845616 MsG0280010768.01.T01:intron 40.0%
! TGGGACTGATTGACTTTATC+TGG - Chr2:74842846-74842865 MsG0280010768.01.T01:CDS 40.0%
!! AAAATAGAGCTTTGGGGGAA+AGG + Chr2:74843748-74843767 None:intergenic 40.0%
!! AAGAAACTTCAGATGGACTG+TGG - Chr2:74843010-74843029 MsG0280010768.01.T01:intron 40.0%
!! AGCTCAAAGGAGTATTCTCA+GGG + Chr2:74841308-74841327 None:intergenic 40.0%
!! CAATGTTTGGGACTTTTGAG+GGG + Chr2:74843805-74843824 None:intergenic 40.0%
!! CGTTTGATGATGAAGAAGGT+GGG - Chr2:74840672-74840691 MsG0280010768.01.T01:intron 40.0%
!! GAAGGGCATTGAAGATATGA+AGG - Chr2:74844764-74844783 MsG0280010768.01.T01:intron 40.0%
!! GCAGGAAGCTGATTTAGTTT+TGG - Chr2:74842332-74842351 MsG0280010768.01.T01:exon 40.0%
!! TCTGCGTTTGATGATGAAGA+AGG - Chr2:74840668-74840687 MsG0280010768.01.T01:intron 40.0%
!! TGCCGAGATCTAGCTTTATA+AGG - Chr2:74842172-74842191 MsG0280010768.01.T01:three_prime_UTR 40.0%
!! TGGTTTCATGAAGAGCATCT+TGG - Chr2:74843204-74843223 MsG0280010768.01.T01:intron 40.0%
!! TTATGTGTTGGTGTTGGTGT+CGG - Chr2:74841070-74841089 MsG0280010768.01.T01:intron 40.0%
!! TTGGTGCCATTGGTACAAAA+CGG - Chr2:74843851-74843870 MsG0280010768.01.T01:intron 40.0%
!!! ACCCCCCCTATTTTAAAACT+CGG - Chr2:74845356-74845375 MsG0280010768.01.T01:intron 40.0%
!!! CGCTATTACTTTTTGGGGTT+GGG - Chr2:74840899-74840918 MsG0280010768.01.T01:intron 40.0%
!!! GAAGCTGATTTAGTTTTGGG+GGG - Chr2:74842336-74842355 MsG0280010768.01.T01:CDS 40.0%
!!! GGAAGCTGATTTAGTTTTGG+GGG - Chr2:74842335-74842354 MsG0280010768.01.T01:CDS 40.0%
!!! TCCGAGTTTTAAAATAGGGG+GGG + Chr2:74845360-74845379 None:intergenic 40.0%
!!! TCGCTATTACTTTTTGGGGT+TGG - Chr2:74840898-74840917 MsG0280010768.01.T01:intron 40.0%
!!! TTTGGGGGAAAGGTTTTAGA+GGG + Chr2:74843738-74843757 None:intergenic 40.0%
!!! TTTTAGTTCCCCCAGATTAG+GGG - Chr2:74843688-74843707 MsG0280010768.01.T01:intron 40.0%
AAAAATTAAATGGGGGGGGG+GGG - Chr2:74846995-74847014 MsG0280010768.01.T01:five_prime_UTR 45.0%
AAACTCCAGCATTCCCATCA+GGG + Chr2:74842436-74842455 None:intergenic 45.0%
AAGAAGGTGAGCACTTTACG+AGG - Chr2:74844171-74844190 MsG0280010768.01.T01:intron 45.0%
AAGCAAAGTGCAGATGACGA+AGG + Chr2:74842134-74842153 None:intergenic 45.0%
AGATGCGTTACCTGAGAGAA+TGG + Chr2:74840385-74840404 None:intergenic 45.0%
AGCAAAGTGCAGATGACGAA+GGG + Chr2:74842133-74842152 None:intergenic 45.0%
ATATCCGTGCTTCATTGCCT+AGG + Chr2:74840969-74840988 None:intergenic 45.0%
ATCAAGCTTTGCTAGGGAGT+AGG + Chr2:74844017-74844036 None:intergenic 45.0%
ATCCTGAGGTAATATTGGGC+TGG - Chr2:74844241-74844260 MsG0280010768.01.T01:intron 45.0%
CAAGGGATCTTTACCCTAGT+CGG - Chr2:74841432-74841451 MsG0280010768.01.T01:intron 45.0%
CAGCATCTGGATCAGGATAA+GGG + Chr2:74843144-74843163 None:intergenic 45.0%
CAGGGAAGATAATGTGGTAG+AGG + Chr2:74845471-74845490 None:intergenic 45.0%
CCTTGAAGAAGTTGAGGAAC+GGG - Chr2:74840718-74840737 MsG0280010768.01.T01:intron 45.0%
CCTTTGAGCTGGAGATGATT+GGG - Chr2:74841318-74841337 MsG0280010768.01.T01:intron 45.0%
CGAGTACCTTGAAGAAGTTG+AGG - Chr2:74840712-74840731 MsG0280010768.01.T01:intron 45.0%
CTATTTACGATGGCCACTTG+GGG + Chr2:74845753-74845772 None:intergenic 45.0%
CTCTGGGTTTCATGAGTTTC+TGG - Chr2:74841255-74841274 MsG0280010768.01.T01:intron 45.0%
CTGAGAATACTCCTTTGAGC+TGG - Chr2:74841307-74841326 MsG0280010768.01.T01:intron 45.0%
CTGCTATTACAACTTCCACC+AGG + Chr2:74844437-74844456 None:intergenic 45.0%
GAAAAATTAAATGGGGGGGG+GGG - Chr2:74846994-74847013 MsG0280010768.01.T01:five_prime_UTR 45.0%
GAACTACCTGATGACCATCA+TGG + Chr2:74842481-74842500 None:intergenic 45.0%
GATTATGTTGGGAAGGGACT+TGG + Chr2:74846459-74846478 None:intergenic 45.0%
GCAACATGGTAATCCTCCAT+CGG - Chr2:74845814-74845833 MsG0280010768.01.T01:intron 45.0%
GCGAAATAGCCACTAACAGA+GGG + Chr2:74845581-74845600 None:intergenic 45.0%
GCTATTTACGATGGCCACTT+GGG + Chr2:74845754-74845773 None:intergenic 45.0%
GGAGATGATTGGGTAAGCTA+CGG - Chr2:74841328-74841347 MsG0280010768.01.T01:intron 45.0%
GGCTATGTTTGGGAGTTTGA+AGG - Chr2:74843441-74843460 MsG0280010768.01.T01:intron 45.0%
GTAATCCTCCATCGGATGAT+TGG - Chr2:74845822-74845841 MsG0280010768.01.T01:intron 45.0%
GTCGAATAAAATCAGGGACC+AGG + Chr2:74842814-74842833 None:intergenic 45.0%
GTGAGTTTCAGTTGTCTTGG+TGG - Chr2:74845076-74845095 MsG0280010768.01.T01:intron 45.0%
TATGAAGCACAGACACTCCT+CGG + Chr2:74841151-74841170 None:intergenic 45.0%
TCAAGCTTTGCTAGGGAGTA+GGG + Chr2:74844016-74844035 None:intergenic 45.0%
TCAGCATCTGGATCAGGATA+AGG + Chr2:74843145-74843164 None:intergenic 45.0%
TCCTTTGAGCTGGAGATGAT+TGG - Chr2:74841317-74841336 MsG0280010768.01.T01:intron 45.0%
TCTGTGCTTCATAGGTCCTA+AGG - Chr2:74841158-74841177 MsG0280010768.01.T01:intron 45.0%
TGACAAGGAGGACTCAATTG+TGG - Chr2:74844632-74844651 MsG0280010768.01.T01:intron 45.0%
TGATACAGTGTGTTTGTGCG+AGG - Chr2:74843179-74843198 MsG0280010768.01.T01:CDS 45.0%
TGCGAAATAGCCACTAACAG+AGG + Chr2:74845582-74845601 None:intergenic 45.0%
TGTGGGTCTGAAAATCCACT+GGG - Chr2:74844330-74844349 MsG0280010768.01.T01:CDS 45.0%
TGTTCTTCAGCATCTGGATC+AGG + Chr2:74843151-74843170 None:intergenic 45.0%
TTGTGAGATACAACCCGTTC+TGG - Chr2:74840930-74840949 MsG0280010768.01.T01:intron 45.0%
TTGTGGGTCTGAAAATCCAC+TGG - Chr2:74844329-74844348 MsG0280010768.01.T01:CDS 45.0%
TTTCGGAGGGTTGAGATTAG+AGG - Chr2:74843475-74843494 MsG0280010768.01.T01:intron 45.0%
TTTGGGAGTTTGAAGGGGAA+GGG - Chr2:74843448-74843467 MsG0280010768.01.T01:intron 45.0%
! AAATACCAAGAGGGCACATC+AGG - Chr2:74846424-74846443 MsG0280010768.01.T01:intron 45.0%
! ACTGTGTTCTAGACCAGAAC+GGG + Chr2:74840946-74840965 None:intergenic 45.0%
! CAAAGGGTACATGAAAAGGC+AGG - Chr2:74842386-74842405 MsG0280010768.01.T01:intron 45.0%
! GACTGTGTTCTAGACCAGAA+CGG + Chr2:74840947-74840966 None:intergenic 45.0%
! TCTAGCAGTAACGGAAGAGA+GGG + Chr2:74840337-74840356 None:intergenic 45.0%
! TGCTATTTACGATGGCCACT+TGG + Chr2:74845755-74845774 None:intergenic 45.0%
!! AAGGAGTATTCTCAGGGACA+TGG + Chr2:74841302-74841321 None:intergenic 45.0%
!! AAGTTCCATGTGATGGGTGA+GGG - Chr2:74841353-74841372 MsG0280010768.01.T01:intron 45.0%
!! AGGAGTATTCTCAGGGACAT+GGG + Chr2:74841301-74841320 None:intergenic 45.0%
!! CAAAATTGGCTTGGACGAGT+CGG + Chr2:74845002-74845021 None:intergenic 45.0%
!! CAGCCGACTTTTAACCTACA+TGG - Chr2:74846144-74846163 MsG0280010768.01.T01:intron 45.0%
!! CAGCTCAAAGGAGTATTCTC+AGG + Chr2:74841309-74841328 None:intergenic 45.0%
!! CTTTGGGGGAAAGGTTTTAG+AGG + Chr2:74843739-74843758 None:intergenic 45.0%
!! GCGTTTGATGATGAAGAAGG+TGG - Chr2:74840671-74840690 MsG0280010768.01.T01:intron 45.0%
!! GGAGTTTGGAAGGTTTTGTG+GGG + Chr2:74843655-74843674 None:intergenic 45.0%
!! GGGAGTTTGGAAGGTTTTGT+GGG + Chr2:74843656-74843675 None:intergenic 45.0%
!! TAAGTTCCATGTGATGGGTG+AGG - Chr2:74841352-74841371 MsG0280010768.01.T01:intron 45.0%
!! TGGAAGGTTTTGTGGGGTTT+GGG + Chr2:74843649-74843668 None:intergenic 45.0%
!! TTGGAAGGTTTTGTGGGGTT+TGG + Chr2:74843650-74843669 None:intergenic 45.0%
!!! TACTTTTTGGGGTTGGGAGT+TGG - Chr2:74840905-74840924 MsG0280010768.01.T01:intron 45.0%
!! AAATAAAATATATGATTTAA+TGG + Chr2:74842591-74842610 None:intergenic 5.0%
!! AATAAAATATATGATTTAAT+GGG + Chr2:74842590-74842609 None:intergenic 5.0%
!! ATAAAAAAATAATAAATAGA+TGG - Chr2:74844901-74844920 MsG0280010768.01.T01:CDS 5.0%
AAAATTAAATGGGGGGGGGG+GGG - Chr2:74846996-74847015 MsG0280010768.01.T01:five_prime_UTR 50.0%
AACTCCAGCATTCCCATCAG+GGG + Chr2:74842435-74842454 None:intergenic 50.0%
ACGGATATGAACACGGACAC+CGG - Chr2:74840981-74841000 MsG0280010768.01.T01:intron 50.0%
AGGTTCGGCCATTTCACCAA+GGG - Chr2:74841415-74841434 MsG0280010768.01.T01:intron 50.0%
ATGGGCTTGGCAATGATTGG+AGG + Chr2:74841283-74841302 None:intergenic 50.0%
CAAACTCCAGCATTCCCATC+AGG + Chr2:74842437-74842456 None:intergenic 50.0%
CAACTGAAACTCACCCCACA+CGG + Chr2:74845070-74845089 None:intergenic 50.0%
CAGCATCTGTACTCTGGCTA+TGG + Chr2:74841504-74841523 None:intergenic 50.0%
CAGTCCTAGGCAATGAAGCA+CGG - Chr2:74840962-74840981 MsG0280010768.01.T01:intron 50.0%
CCCAATCATCTCCAGCTCAA+AGG + Chr2:74841321-74841340 None:intergenic 50.0%
CCCGTTCCTCAACTTCTTCA+AGG + Chr2:74840721-74840740 None:intergenic 50.0%
CGACTAGGGTAAAGATCCCT+TGG + Chr2:74841434-74841453 None:intergenic 50.0%
CTCGAGTCTTCTGATGAGGT+TGG - Chr2:74843228-74843247 MsG0280010768.01.T01:intron 50.0%
CTCTCAGAATGAGGTCAACC+AGG + Chr2:74841458-74841477 None:intergenic 50.0%
GAAACACACACACAACGGTG+TGG + Chr2:74841704-74841723 None:intergenic 50.0%
GAAGACACGCCTCAACTTGT+GGG - Chr2:74844313-74844332 MsG0280010768.01.T01:CDS 50.0%
GACATGGGCTTGGCAATGAT+TGG + Chr2:74841286-74841305 None:intergenic 50.0%
GATGTGGCACAAGCTTCTGT+TGG - Chr2:74844380-74844399 MsG0280010768.01.T01:intron 50.0%
GCAAAGTGCAGATGACGAAG+GGG + Chr2:74842132-74842151 None:intergenic 50.0%
GCTGCTTCCCCAGTTATACA+TGG - Chr2:74844515-74844534 MsG0280010768.01.T01:intron 50.0%
GGGGTGAGTTTCAGTTGTCT+TGG - Chr2:74845073-74845092 MsG0280010768.01.T01:intron 50.0%
GTACCTCAGCATCTGTACTC+TGG + Chr2:74841510-74841529 None:intergenic 50.0%
GTCAATGTCCATGTCGTGTC+CGG + Chr2:74841003-74841022 None:intergenic 50.0%
GTCATGCCATGATGGTCATC+AGG - Chr2:74842472-74842491 MsG0280010768.01.T01:intron 50.0%
GTGCTCACCTTCTTCATCTC+TGG + Chr2:74844165-74844184 None:intergenic 50.0%
GTGGGTCTGAAAATCCACTG+GGG - Chr2:74844331-74844350 MsG0280010768.01.T01:CDS 50.0%
GTTTGGGAGTTTGAAGGGGA+AGG - Chr2:74843447-74843466 MsG0280010768.01.T01:intron 50.0%
TAGCCAGAGTACAGATGCTG+AGG - Chr2:74841504-74841523 MsG0280010768.01.T01:intron 50.0%
TAGGTTCGGCCATTTCACCA+AGG - Chr2:74841414-74841433 MsG0280010768.01.T01:intron 50.0%
TATTCTCAGGGACATGGGCT+TGG + Chr2:74841296-74841315 None:intergenic 50.0%
TCTACACACTCACCTGACCA+GGG + Chr2:74841189-74841208 None:intergenic 50.0%
TGCCAGCCCAATATTACCTC+AGG + Chr2:74844246-74844265 None:intergenic 50.0%
TGCTCGTTGTCATGCCATGA+TGG - Chr2:74842464-74842483 MsG0280010768.01.T01:intron 50.0%
TGGGCTTGGCAATGATTGGA+GGG + Chr2:74841282-74841301 None:intergenic 50.0%
TGGTCTCGAGTCTTCTGATG+AGG - Chr2:74843224-74843243 MsG0280010768.01.T01:intron 50.0%
TTCATCCTGATGTGCCCTCT+TGG + Chr2:74846432-74846451 None:intergenic 50.0%
TTCTACACACTCACCTGACC+AGG + Chr2:74841190-74841209 None:intergenic 50.0%
TTTGTGAGGACGGTTGTCAG+TGG - Chr2:74842608-74842627 MsG0280010768.01.T01:CDS 50.0%
! AAGAGGGCACATCAGGATGA+AGG - Chr2:74846431-74846450 MsG0280010768.01.T01:intron 50.0%
! CAGTAACGGAAGAGAGGGTT+TGG + Chr2:74840332-74840351 None:intergenic 50.0%
! CATCATGCAGCACCGGAAAA+GGG + Chr2:74845899-74845918 None:intergenic 50.0%
! CTGGTCTAGAACACAGTCCT+AGG - Chr2:74840949-74840968 MsG0280010768.01.T01:intron 50.0%
! GGGGAGTTTGGAAGGTTTTG+TGG + Chr2:74843657-74843676 None:intergenic 50.0%
! GTCTAGCAGTAACGGAAGAG+AGG + Chr2:74840338-74840357 None:intergenic 50.0%
! GTGTACTGGTCTGGTTCGTT+GGG - Chr2:74841380-74841399 MsG0280010768.01.T01:intron 50.0%
! TAGGTCCTAAGGTGTTTCCC+TGG - Chr2:74841169-74841188 MsG0280010768.01.T01:intron 50.0%
! TCATCATGCAGCACCGGAAA+AGG + Chr2:74845900-74845919 None:intergenic 50.0%
! TGTGTACTGGTCTGGTTCGT+TGG - Chr2:74841379-74841398 MsG0280010768.01.T01:intron 50.0%
!! ATTGGCTCGCCCTTTCACTA+GGG - Chr2:74845840-74845859 MsG0280010768.01.T01:intron 50.0%
!! GAGGAGTGTCTGTGCTTCAT+AGG - Chr2:74841150-74841169 MsG0280010768.01.T01:intron 50.0%
!! GTTTGGGACTTTTGAGGGGA+GGG + Chr2:74843801-74843820 None:intergenic 50.0%
!! TGTTTGGGACTTTTGAGGGG+AGG + Chr2:74843802-74843821 None:intergenic 50.0%
!! TTTGGGACTTTTGAGGGGAG+GGG + Chr2:74843800-74843819 None:intergenic 50.0%
!!! TGGTGGTTTTAAAGGCGCGT+TGG - Chr2:74845093-74845112 MsG0280010768.01.T01:intron 50.0%
!!! TTAGTTTTGGGGGGCGATGA+AGG - Chr2:74842345-74842364 MsG0280010768.01.T01:CDS 50.0%
AAATTAAATGGGGGGGGGGG+GGG - Chr2:74846997-74847016 MsG0280010768.01.T01:five_prime_UTR 55.0%
AAGAATAAGCGGCGCCGTGT+GGG - Chr2:74845053-74845072 MsG0280010768.01.T01:intron 55.0%
ACGCGTTCATCATGCAGCAC+CGG + Chr2:74845906-74845925 None:intergenic 55.0%
AGAAGTTGAGGAACGGGAGC+TGG - Chr2:74840724-74840743 MsG0280010768.01.T01:intron 55.0%
CAACACCCTCACCCATCACA+TGG + Chr2:74841361-74841380 None:intergenic 55.0%
CAGTCTGGTCCCTCTGTTAG+TGG - Chr2:74845569-74845588 MsG0280010768.01.T01:intron 55.0%
CAGTGTGTTTGTGCGAGGAC+TGG - Chr2:74843184-74843203 MsG0280010768.01.T01:CDS 55.0%
CCTGACCAGGGAAACACCTT+AGG + Chr2:74841177-74841196 None:intergenic 55.0%
CGACATGGACATTGACACGC+TGG - Chr2:74841007-74841026 MsG0280010768.01.T01:intron 55.0%
GATCTTTACCCTAGTCGGCC+TGG - Chr2:74841437-74841456 MsG0280010768.01.T01:intron 55.0%
GATGGGGGTCTCTCAGAATG+AGG + Chr2:74841467-74841486 None:intergenic 55.0%
GATTAGGCGTGTCCCAGTGT+CGG + Chr2:74841129-74841148 None:intergenic 55.0%
GCACAGACACTCCTCGGATT+AGG + Chr2:74841145-74841164 None:intergenic 55.0%
GGAAGACACGCCTCAACTTG+TGG - Chr2:74844312-74844331 MsG0280010768.01.T01:CDS 55.0%
GGAGTTTGAAGGGGAAGGGA+GGG - Chr2:74843452-74843471 MsG0280010768.01.T01:intron 55.0%
GTTAGTGTCCGTGTCGTGTC+CGG + Chr2:74846662-74846681 None:intergenic 55.0%
TAAGAATAAGCGGCGCCGTG+TGG - Chr2:74845052-74845071 MsG0280010768.01.T01:intron 55.0%
TGAAGGGGAAGGGAGGGTTT+CGG - Chr2:74843458-74843477 MsG0280010768.01.T01:intron 55.0%
! AAGGTACTCGCCGAGCGTAA+CGG + Chr2:74840702-74840721 None:intergenic 55.0%
! CCTAAGGTGTTTCCCTGGTC+AGG - Chr2:74841174-74841193 MsG0280010768.01.T01:intron 55.0%
! TCTGGTTCGTTGGGTCCTCT+GGG - Chr2:74841389-74841408 MsG0280010768.01.T01:intron 55.0%
! TGGTGTCGGACTGTTGGTGT+TGG - Chr2:74841084-74841103 MsG0280010768.01.T01:intron 55.0%
!! CGGACTGTTGGTGTTGGTGT+CGG - Chr2:74841090-74841109 MsG0280010768.01.T01:intron 55.0%
!! GAAGGCACTTGATCCCCAAG+TGG - Chr2:74845737-74845756 MsG0280010768.01.T01:intron 55.0%
!! GAGGGTGTTGTGTACTGGTC+TGG - Chr2:74841371-74841390 MsG0280010768.01.T01:intron 55.0%
!! GATTGGCTCGCCCTTTCACT+AGG - Chr2:74845839-74845858 MsG0280010768.01.T01:intron 55.0%
!! TGGGTGAGGGTGTTGTGTAC+TGG - Chr2:74841366-74841385 MsG0280010768.01.T01:intron 55.0%
!! TGGTGTTGGTGTCGGACTGT+TGG - Chr2:74841078-74841097 MsG0280010768.01.T01:intron 55.0%
!! TGTTGGTGTTGGTGTCGGAC+AGG - Chr2:74841075-74841094 MsG0280010768.01.T01:intron 55.0%
AATTAAATGGGGGGGGGGGG+GGG - Chr2:74846998-74847017 MsG0280010768.01.T01:five_prime_UTR 60.0%
ACAGGACACGTGTCCGACAC+TGG - Chr2:74841113-74841132 MsG0280010768.01.T01:intron 60.0%
ACTGGGACACGCCTAATCCG+AGG - Chr2:74841131-74841150 MsG0280010768.01.T01:intron 60.0%
AGAATAAGCGGCGCCGTGTG+GGG - Chr2:74845054-74845073 MsG0280010768.01.T01:intron 60.0%
AGGGCGAGCCAATCATCCGA+TGG + Chr2:74845833-74845852 None:intergenic 60.0%
ATGGCCGAACCTAGACCCAG+AGG + Chr2:74841407-74841426 None:intergenic 60.0%
CAGGACACGTGTCCGACACT+GGG - Chr2:74841114-74841133 MsG0280010768.01.T01:intron 60.0%
GAGGTCAACCAGGCCGACTA+GGG + Chr2:74841448-74841467 None:intergenic 60.0%
GCATCACGTGCACCCCTGAT+GGG - Chr2:74842420-74842439 MsG0280010768.01.T01:intron 60.0%
GCGAGCCAATCATCCGATGG+AGG + Chr2:74845830-74845849 None:intergenic 60.0%
GGGAGTTTGAAGGGGAAGGG+AGG - Chr2:74843451-74843470 MsG0280010768.01.T01:intron 60.0%
GGGTCCTCTGGGTCTAGGTT+CGG - Chr2:74841400-74841419 MsG0280010768.01.T01:intron 60.0%
GTACTCTGGCTATGGACGCC+AGG + Chr2:74841496-74841515 None:intergenic 60.0%
GTGAGGACGGTTGTCAGTGG+CGG - Chr2:74842611-74842630 MsG0280010768.01.T01:CDS 60.0%
TCGTTGGGTCCTCTGGGTCT+AGG - Chr2:74841395-74841414 MsG0280010768.01.T01:intron 60.0%
TCTAATGGGGCGGGTCTTCC+TGG - Chr2:74844416-74844435 MsG0280010768.01.T01:intron 60.0%
TCTGAGAGACCCCCATCCCT+GGG - Chr2:74841470-74841489 MsG0280010768.01.T01:intron 60.0%
TGAAGCACGGACACGGACAC+CGG - Chr2:74846640-74846659 MsG0280010768.01.T01:CDS 60.0%
TGAGGTCAACCAGGCCGACT+AGG + Chr2:74841449-74841468 None:intergenic 60.0%
TGCACCCCTGATGGGAATGC+TGG - Chr2:74842428-74842447 MsG0280010768.01.T01:intron 60.0%
TGCATCACGTGCACCCCTGA+TGG - Chr2:74842419-74842438 MsG0280010768.01.T01:intron 60.0%
TTTGGGGGGCGATGAAGGCA+GGG - Chr2:74842350-74842369 MsG0280010768.01.T01:CDS 60.0%
! ATCAGGATAAGGGCGCGCAC+AGG + Chr2:74843134-74843153 None:intergenic 60.0%
! GTCTGGTTCGTTGGGTCCTC+TGG - Chr2:74841388-74841407 MsG0280010768.01.T01:intron 60.0%
! TACTCGCCGAGCGTAACGGA+TGG + Chr2:74840698-74840717 None:intergenic 60.0%
! TTCTGAGAGACCCCCATCCC+TGG - Chr2:74841469-74841488 MsG0280010768.01.T01:intron 60.0%
!! GGACTTTTGAGGGGAGGGGA+TGG + Chr2:74843796-74843815 None:intergenic 60.0%
!! TTTTGGGGGGCGATGAAGGC+AGG - Chr2:74842349-74842368 MsG0280010768.01.T01:CDS 60.0%
AATGGGGCGGGTCTTCCTGG+TGG - Chr2:74844419-74844438 MsG0280010768.01.T01:intron 65.0%
AGGGGAAGGGAGGGTTTCGG+AGG - Chr2:74843461-74843480 MsG0280010768.01.T01:intron 65.0%
ATTAAATGGGGGGGGGGGGG+GGG - Chr2:74846999-74847018 MsG0280010768.01.T01:five_prime_UTR 65.0%
CACGGACACCGGACACGACA+CGG - Chr2:74840992-74841011 MsG0280010768.01.T01:intron 65.0%
CACGGACACCGGACACGACA+TGG - Chr2:74840992-74841011 MsG0280010768.01.T01:intron 65.0%
GGGGAAGGGAGGGTTTCGGA+GGG - Chr2:74843462-74843481 MsG0280010768.01.T01:intron 65.0%
GGTGGGCCATCCGTTACGCT+CGG - Chr2:74840689-74840708 MsG0280010768.01.T01:intron 65.0%
! AGGATGGGCTTCGCACCTCC+TGG - Chr2:74844784-74844803 MsG0280010768.01.T01:intron 65.0%
! GACGGTTGTCAGTGGCGGAG+TGG - Chr2:74842616-74842635 MsG0280010768.01.T01:CDS 65.0%
ATGGACGCCAGGCCCAGGGA+TGG + Chr2:74841485-74841504 None:intergenic 70.0%
GGCTATGGACGCCAGGCCCA+GGG + Chr2:74841489-74841508 None:intergenic 70.0%
TGGACGCCAGGCCCAGGGAT+GGG + Chr2:74841484-74841503 None:intergenic 70.0%
TGGCTATGGACGCCAGGCCC+AGG + Chr2:74841490-74841509 None:intergenic 70.0%
TTAAATGGGGGGGGGGGGGG+GGG - Chr2:74847000-74847019 MsG0280010768.01.T01:five_prime_UTR 70.0%
GACGCCAGGCCCAGGGATGG+GGG + Chr2:74841482-74841501 None:intergenic 75.0%
GAGACCCCCATCCCTGGGCC+TGG - Chr2:74841475-74841494 MsG0280010768.01.T01:intron 75.0%
GGACGCCAGGCCCAGGGATG+GGG + Chr2:74841483-74841502 None:intergenic 75.0%
TAAATGGGGGGGGGGGGGGG+GGG - Chr2:74847001-74847020 MsG0280010768.01.T01:five_prime_UTR 75.0%
! AAATGGGGGGGGGGGGGGGG+GGG - Chr2:74847002-74847021 MsG0280010768.01.T01:five_prime_UTR 80.0%
! AATGGGGGGGGGGGGGGGGG+GGG - Chr2:74847003-74847022 MsG0280010768.01.T01:five_prime_UTR 85.0%
! ATGGGGGGGGGGGGGGGGGG+GGG - Chr2:74847004-74847023 MsG0280010768.01.T01:five_prime_UTR 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG - Chr2:74847005-74847024 MsG0280010768.01.T01:five_prime_UTR 95.0%
Chromosome Type Strat End Strand Name
Chr2 gene 74840293 74847070 74840293 ID=MsG0280010768.01;Name=MsG0280010768.01
Chr2 mRNA 74840293 74847070 74840293 ID=MsG0280010768.01.T01;Parent=MsG0280010768.01;Name=MsG0280010768.01.T01;_AED=0.33;_eAED=0.33;_QI=144|0.5|0.44|1|0.75|0.55|9|315|260
Chr2 exon 74840293 74840332 74840293 ID=MsG0280010768.01.T01:exon:7427;Parent=MsG0280010768.01.T01
Chr2 exon 74842060 74842371 74842060 ID=MsG0280010768.01.T01:exon:7426;Parent=MsG0280010768.01.T01
Chr2 exon 74842558 74842750 74842558 ID=MsG0280010768.01.T01:exon:7425;Parent=MsG0280010768.01.T01
Chr2 exon 74842827 74842970 74842827 ID=MsG0280010768.01.T01:exon:7424;Parent=MsG0280010768.01.T01
Chr2 exon 74843162 74843204 74843162 ID=MsG0280010768.01.T01:exon:7423;Parent=MsG0280010768.01.T01
Chr2 exon 74844245 74844376 74844245 ID=MsG0280010768.01.T01:exon:7422;Parent=MsG0280010768.01.T01
Chr2 exon 74844878 74845027 74844878 ID=MsG0280010768.01.T01:exon:7421;Parent=MsG0280010768.01.T01
Chr2 exon 74846618 74846744 74846618 ID=MsG0280010768.01.T01:exon:7420;Parent=MsG0280010768.01.T01
Chr2 exon 74846970 74847070 74846970 ID=MsG0280010768.01.T01:exon:7419;Parent=MsG0280010768.01.T01
Chr2 five_prime_UTR 74846970 74847070 74846970 ID=MsG0280010768.01.T01:five_prime_utr;Parent=MsG0280010768.01.T01
Chr2 five_prime_UTR 74846702 74846744 74846702 ID=MsG0280010768.01.T01:five_prime_utr;Parent=MsG0280010768.01.T01
Chr2 CDS 74846618 74846701 74846618 ID=MsG0280010768.01.T01:cds;Parent=MsG0280010768.01.T01
Chr2 CDS 74844878 74845027 74844878 ID=MsG0280010768.01.T01:cds;Parent=MsG0280010768.01.T01
Chr2 CDS 74844245 74844376 74844245 ID=MsG0280010768.01.T01:cds;Parent=MsG0280010768.01.T01
Chr2 CDS 74843162 74843204 74843162 ID=MsG0280010768.01.T01:cds;Parent=MsG0280010768.01.T01
Chr2 CDS 74842827 74842970 74842827 ID=MsG0280010768.01.T01:cds;Parent=MsG0280010768.01.T01
Chr2 CDS 74842558 74842750 74842558 ID=MsG0280010768.01.T01:cds;Parent=MsG0280010768.01.T01
Chr2 CDS 74842335 74842371 74842335 ID=MsG0280010768.01.T01:cds;Parent=MsG0280010768.01.T01
Chr2 three_prime_UTR 74842060 74842334 74842060 ID=MsG0280010768.01.T01:three_prime_utr;Parent=MsG0280010768.01.T01
Chr2 three_prime_UTR 74840293 74840332 74840293 ID=MsG0280010768.01.T01:three_prime_utr;Parent=MsG0280010768.01.T01
Gene Sequence

>MsG0280010768.01.T01

ATGGATTCTGCGTTTGATGATGAAGAAGGTGGGCCATCCGTTACGCTCGGCGAGTACCTTGAAGAAGTTGAGGAACGGGAGCTGGAAGCTGATTTAGTTTTGGGGGGCGATGAAGGCAGGGAGTGTACTTACAACAAAGGGTACATGAAAAGGCAGGCAATTTTCTTTGCATCACGTGCACCCCTGATGGGAATGCTGGAGTTTGCACTGCTTGCTCGTTGTCATGCCATGATGATTGTGGAAACTATGGACAAAAAAAGAAACTTCAGATGGACTGTGGAATTCAAAGTTGGTGAATTCTACTGCAAGATTTTCCCAAGTAAAGATATTGAGAATGTTGAGAATTCGTACAATCACAACTTAAAGATTCCAGAGATGAAGAAGGTGAGCACTTTACGAGGATTCTTGTCTTCTGTTGGTTCTGAATCTATATCTAATGGGGCGGGTCTTCCTGGTGGAAGTTGTAATAGCAGTATATGCACTGAAGGCGCCAGTTTGCATGTTAATTGTCTCCTTGGTGTGAATATTGTTGCTGCTTCCCCAGTTATACATGAAGCGGATTGCTTTCTACTTGACAAGGAGGACTCAATTGTGGAGTATGAGAAAATTGCGAAGCAAAGAAGAGAAGAAAAGTTACAGCAACAGGAGGGTGCTGAGTTAAGTCTTTTTAATAAACTTGGACATGTAGAGAAAGTCGAGATCTTGAAGGGCATTGAAGATATGAAGGATGGGCTTCGCACCTCCTGGAGTCAGCCGACTCGTCCAAGCCAATTTTGCTGCTGA
Protein sequence

>MsG0280010768.01.T01

MDSAFDDEEGGPSVTLGEYLEEVEERELEADLVLGGDEGRECTYNKGYMKRQAIFFASRAPLMGMLEFALLARCHAMMIVETMDKKRNFRWTVEFKVGEFYCKIFPSKDIENVENSYNHNLKIPEMKKVSTLRGFLSSVGSESISNGAGLPGGSCNSSICTEGASLHVNCLLGVNIVAASPVIHEADCFLLDKEDSIVEYEKIAKQRREEKLQQQEGAELSLFNKLGHVEKVEILKGIEDMKDGLRTSWSQPTRPSQFCC*