AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010881.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010881.01.T01 MTR_2g093160 90.337 445 41 2 5 448 106 549 0.0 801
MsG0280010881.01.T01 MTR_2g093180 87.963 432 51 1 18 448 119 550 0.0 758
MsG0280010881.01.T01 MTR_2g093640 84.368 435 68 0 14 448 115 549 0.0 753
MsG0280010881.01.T01 MTR_4g107530 35.443 474 266 9 5 447 118 582 7.50e-87 277
MsG0280010881.01.T01 MTR_8g469480 34.989 463 279 6 7 448 125 586 1.26e-86 276
MsG0280010881.01.T01 MTR_3g112460 34.581 454 272 7 5 444 108 550 2.05e-85 273
MsG0280010881.01.T01 MTR_5g038060 35.699 465 273 8 5 446 116 577 4.66e-85 273
MsG0280010881.01.T01 MTR_4g107580 35.021 474 267 13 5 446 109 573 8.20e-83 266
MsG0280010881.01.T01 MTR_3g112470 34.141 454 274 7 5 444 108 550 1.66e-82 265
MsG0280010881.01.T01 MTR_4g107510 35.169 472 260 12 11 448 127 586 3.70e-82 265
MsG0280010881.01.T01 MTR_5g055000 33.833 467 279 8 5 448 103 562 1.03e-81 263
MsG0280010881.01.T01 MTR_4g011280 34.194 465 268 11 5 443 117 569 3.91e-79 257
MsG0280010881.01.T01 MTR_4g101380 35.294 476 262 12 5 447 112 574 7.76e-79 256
MsG0280010881.01.T01 MTR_3g462710 32.538 461 282 9 8 447 3 455 3.01e-78 251
MsG0280010881.01.T01 MTR_5g012290 34.681 470 270 12 5 447 112 571 5.41e-78 254
MsG0280010881.01.T01 MTR_3g462710 32.553 470 284 10 1 447 105 564 5.71e-78 253
MsG0280010881.01.T01 MTR_5g012270 33.121 471 276 10 5 447 114 573 6.45e-78 253
MsG0280010881.01.T01 MTR_2g101590 34.047 467 268 12 5 443 111 565 1.56e-77 253
MsG0280010881.01.T01 MTR_7g088825 32.473 465 285 10 5 446 107 565 1.57e-77 253
MsG0280010881.01.T01 MTR_2g101610 33.833 467 269 12 5 443 112 566 1.59e-77 253
MsG0280010881.01.T01 MTR_7g067010 31.624 468 291 8 1 448 105 563 2.09e-77 251
MsG0280010881.01.T01 MTR_2g093650 69.519 187 15 2 238 424 34 178 3.44e-76 237
MsG0280010881.01.T01 MTR_4g015080 31.847 471 286 10 1 448 115 573 4.34e-76 248
MsG0280010881.01.T01 MTR_4g114340 34.130 460 272 9 5 444 109 557 5.08e-76 248
MsG0280010881.01.T01 MTR_4g107610 32.965 452 278 7 5 436 116 562 1.20e-74 245
MsG0280010881.01.T01 MTR_2g101650 34.820 471 269 13 5 448 109 568 2.14e-73 241
MsG0280010881.01.T01 MTR_2g101640 33.691 466 271 12 5 443 108 562 2.24e-73 243
MsG0280010881.01.T01 MTR_3g112450 33.115 459 282 9 1 444 104 552 2.53e-73 241
MsG0280010881.01.T01 MTR_1g057460 33.188 458 265 13 5 443 58 493 2.06e-72 237
MsG0280010881.01.T01 MTR_8g469470 32.696 471 284 11 5 447 117 582 2.45e-72 239
MsG0280010881.01.T01 MTR_5g038190 30.064 469 298 10 2 446 106 568 3.90e-72 238
MsG0280010881.01.T01 MTR_1g057460 33.188 458 265 13 5 443 129 564 5.44e-72 238
MsG0280010881.01.T01 MTR_8g103233 32.906 468 277 11 1 443 98 553 2.19e-71 236
MsG0280010881.01.T01 MTR_7g088820 31.398 465 290 10 5 446 48 506 4.00e-71 234
MsG0280010881.01.T01 MTR_3g069500 32.609 460 285 11 1 448 116 562 4.54e-71 235
MsG0280010881.01.T01 MTR_2g101560 33.120 468 271 11 5 443 112 566 7.36e-71 236
MsG0280010881.01.T01 MTR_7g088820 31.373 459 286 10 11 446 6 458 8.44e-71 232
MsG0280010881.01.T01 MTR_7g088790 32.473 465 285 10 5 446 114 572 1.44e-70 234
MsG0280010881.01.T01 MTR_7g088820 31.398 465 290 10 5 446 110 568 1.54e-70 234
MsG0280010881.01.T01 MTR_1g009200 33.619 467 268 11 5 443 112 564 1.69e-70 234
MsG0280010881.01.T01 MTR_1g026750 33.624 458 265 12 12 443 110 554 5.27e-70 232
MsG0280010881.01.T01 MTR_1g026740 33.406 461 264 15 1 433 98 543 1.43e-69 231
MsG0280010881.01.T01 MTR_3g069440 31.435 439 273 6 31 448 139 570 3.13e-69 231
MsG0280010881.01.T01 MTR_4g019580 32.120 467 286 10 1 448 117 571 4.37e-69 230
MsG0280010881.01.T01 MTR_4g033325 34.081 446 246 13 27 447 4 426 5.23e-69 226
MsG0280010881.01.T01 MTR_4g033325 34.081 446 246 13 27 447 30 452 6.94e-69 226
MsG0280010881.01.T01 MTR_5g014150 32.301 452 274 10 18 444 142 586 8.06e-69 230
MsG0280010881.01.T01 MTR_7g005930 30.921 456 291 8 5 444 120 567 8.12e-69 229
MsG0280010881.01.T01 MTR_3g014790 32.200 441 255 10 41 447 118 548 4.81e-68 227
MsG0280010881.01.T01 MTR_4g033325 34.081 446 246 13 27 447 128 550 8.73e-68 226
MsG0280010881.01.T01 MTR_7g065080 30.519 462 294 9 1 448 25 473 2.65e-67 223
MsG0280010881.01.T01 MTR_4g098800 31.983 469 287 12 5 447 121 583 5.81e-67 224
MsG0280010881.01.T01 MTR_7g098040 27.932 469 304 8 1 446 115 572 7.00e-67 225
MsG0280010881.01.T01 MTR_7g098200 29.915 468 284 9 8 447 3 454 1.09e-66 221
MsG0280010881.01.T01 MTR_4g098800 31.983 469 287 12 5 447 186 648 1.35e-66 225
MsG0280010881.01.T01 MTR_1g075440 29.474 475 289 9 1 446 109 566 1.89e-66 223
MsG0280010881.01.T01 MTR_7g065080 30.519 462 294 9 1 448 112 560 2.32e-66 223
MsG0280010881.01.T01 MTR_1g042310 29.274 468 299 9 1 446 63 520 2.40e-66 222
MsG0280010881.01.T01 MTR_0236s0050 32.314 458 269 13 5 443 58 493 2.51e-66 221
MsG0280010881.01.T01 MTR_1g042310 29.274 468 299 9 1 446 70 527 4.15e-66 221
MsG0280010881.01.T01 MTR_7g013270 30.580 448 285 8 18 447 188 627 4.66e-66 223
MsG0280010881.01.T01 MTR_7g098200 29.684 475 290 9 1 447 110 568 4.84e-66 222
MsG0280010881.01.T01 MTR_1g042310 29.274 468 299 9 1 446 107 564 8.96e-66 221
MsG0280010881.01.T01 MTR_1g026770 32.207 444 271 12 22 443 115 550 9.70e-66 221
MsG0280010881.01.T01 MTR_7g098200 29.787 470 286 9 1 447 110 558 1.84e-65 221
MsG0280010881.01.T01 MTR_7g098230 28.421 475 296 9 1 447 107 565 3.27e-65 220
MsG0280010881.01.T01 MTR_7g010820 32.203 472 277 9 5 445 111 570 6.01e-65 219
MsG0280010881.01.T01 MTR_0294s0020 32.809 445 253 10 27 447 128 550 1.03e-64 218
MsG0280010881.01.T01 MTR_1g116930 30.853 457 274 10 17 448 120 559 1.40e-64 218
MsG0280010881.01.T01 MTR_7g098180 29.025 472 300 9 1 448 112 572 1.76e-64 218
MsG0280010881.01.T01 MTR_4g033385 32.658 444 250 11 31 447 32 453 4.95e-64 213
MsG0280010881.01.T01 MTR_7g098220 29.019 479 290 9 1 448 67 526 1.18e-63 215
MsG0280010881.01.T01 MTR_7g098220 29.512 471 298 8 1 448 111 570 3.71e-63 214
MsG0280010881.01.T01 MTR_4g033330 32.388 423 242 10 27 425 128 530 6.38e-63 213
MsG0280010881.01.T01 MTR_1g041875 28.281 442 292 8 1 427 110 541 1.30e-62 213
MsG0280010881.01.T01 MTR_7g098160 27.673 477 295 10 1 446 114 571 1.77e-62 213
MsG0280010881.01.T01 MTR_3g100980 29.769 477 285 12 1 448 97 552 6.24e-62 211
MsG0280010881.01.T01 MTR_4g033315 31.011 445 263 10 27 447 128 552 6.57e-62 210
MsG0280010881.01.T01 MTR_4g033310 31.011 445 263 10 27 447 128 552 6.57e-62 210
MsG0280010881.01.T01 MTR_5g085850 29.670 455 294 11 5 446 115 556 8.99e-62 211
MsG0280010881.01.T01 MTR_7g098090 27.848 474 303 9 1 446 114 576 1.06e-61 211
MsG0280010881.01.T01 MTR_2g017750 29.263 475 298 11 5 446 119 588 2.54e-61 210
MsG0280010881.01.T01 MTR_1g041885 27.928 444 295 8 1 429 63 496 4.59e-61 207
MsG0280010881.01.T01 MTR_5g038380 28.423 482 293 13 1 446 109 574 6.34e-61 208
MsG0280010881.01.T01 MTR_3g072300 30.297 472 290 12 1 447 105 562 9.87e-61 208
MsG0280010881.01.T01 MTR_1g041815 28.753 473 294 9 1 446 108 564 1.38e-60 207
MsG0280010881.01.T01 MTR_1g041835 27.907 473 298 9 1 446 108 564 4.73e-60 206
MsG0280010881.01.T01 MTR_3g005010 29.655 435 259 9 38 447 132 544 6.17e-60 205
MsG0280010881.01.T01 MTR_3g069420 30.638 470 291 10 1 448 115 571 8.50e-60 206
MsG0280010881.01.T01 MTR_7g064780 31.567 453 288 8 5 437 111 561 1.31e-59 205
MsG0280010881.01.T01 MTR_8g469310 28.964 473 293 13 5 446 111 571 1.43e-59 204
MsG0280010881.01.T01 MTR_4g123537 29.462 465 295 10 1 447 122 571 6.10e-59 204
MsG0280010881.01.T01 MTR_2g005130 29.130 460 295 8 1 446 121 563 1.12e-57 200
MsG0280010881.01.T01 MTR_4g033375 33.850 387 216 9 29 395 130 496 4.92e-57 196
MsG0280010881.01.T01 MTR_7g111260 29.139 453 286 10 13 447 112 547 6.63e-57 197
MsG0280010881.01.T01 MTR_8g038880 31.364 440 264 9 40 448 120 552 1.29e-56 196
MsG0280010881.01.T01 MTR_4g033395 33.592 387 214 10 31 396 133 497 3.56e-56 194
MsG0280010881.01.T01 MTR_3g100980 28.373 504 285 13 1 448 97 580 4.81e-56 196
MsG0280010881.01.T01 MTR_8g091265 70.992 131 33 2 189 314 3 133 3.47e-55 180
MsG0280010881.01.T01 MTR_7g064800 30.482 456 291 8 11 440 117 572 3.76e-54 190
MsG0280010881.01.T01 MTR_4g107670 28.540 459 268 13 31 447 132 572 7.99e-54 189
MsG0280010881.01.T01 MTR_1g085090 27.742 465 301 10 1 447 100 547 3.05e-53 188
MsG0280010881.01.T01 MTR_8g087780 27.389 471 311 9 5 446 106 574 6.84e-52 184
MsG0280010881.01.T01 MTR_7g006540 28.092 477 304 12 1 446 144 612 3.94e-51 183
MsG0280010881.01.T01 MTR_8g087810 28.178 472 307 10 5 446 106 575 2.43e-49 177
MsG0280010881.01.T01 MTR_7g098150 28.242 347 229 6 1 338 114 449 2.24e-48 172
MsG0280010881.01.T01 MTR_7g098210 27.253 466 250 10 1 447 48 443 4.94e-42 154
MsG0280010881.01.T01 MTR_4g024930 28.078 463 280 14 5 444 121 553 5.25e-42 157
MsG0280010881.01.T01 MTR_7g051880 26.202 416 272 8 32 437 129 519 3.56e-40 151
MsG0280010881.01.T01 MTR_7g051830 25.481 416 275 7 32 437 129 519 3.54e-39 148
MsG0280010881.01.T01 MTR_6g008690 24.235 425 274 9 52 444 127 535 4.55e-39 148
MsG0280010881.01.T01 MTR_7g052600 26.202 416 272 8 32 437 129 519 3.20e-38 145
MsG0280010881.01.T01 MTR_1g009170 27.114 402 223 11 48 429 9 360 2.05e-35 135
MsG0280010881.01.T01 MTR_4g033310 28.391 317 192 6 148 447 190 488 1.65e-33 132
MsG0280010881.01.T01 MTR_8g091275 63.889 72 25 1 96 166 1 72 6.23e-26 101
MsG0280010881.01.T01 MTR_8g091480 66.667 57 14 1 132 188 38 89 9.00e-16 80.5
MsG0280010881.01.T01 MTR_3g065350 32.258 155 96 4 230 378 1 152 6.61e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010881.01.T01 AT3G45660 51.096 456 202 5 1 448 102 544 2.31e-166 480
MsG0280010881.01.T01 AT3G45660 51.096 456 202 5 1 448 102 544 2.31e-166 480
MsG0280010881.01.T01 AT3G45660 51.096 456 202 5 1 448 123 565 4.49e-166 480
MsG0280010881.01.T01 AT3G45650 51.754 456 199 5 1 448 103 545 5.48e-165 476
MsG0280010881.01.T01 AT3G45650 48.963 482 199 6 1 448 103 571 8.56e-159 461
MsG0280010881.01.T01 AT3G45710 47.216 449 232 3 1 448 102 546 1.78e-156 455
MsG0280010881.01.T01 AT3G45680 48.214 448 228 2 1 448 101 544 1.02e-153 447
MsG0280010881.01.T01 AT3G45700 47.321 448 226 3 1 448 97 534 1.81e-151 442
MsG0280010881.01.T01 AT3G45720 43.750 448 247 2 1 448 100 542 8.40e-140 412
MsG0280010881.01.T01 AT3G45690 43.875 449 205 9 1 448 99 501 4.59e-126 375
MsG0280010881.01.T01 AT1G69870 36.069 463 271 8 5 446 136 594 2.29e-91 289
MsG0280010881.01.T01 AT1G18880 35.356 478 262 10 5 448 104 568 8.18e-87 276
MsG0280010881.01.T01 AT3G47960 35.010 477 261 12 5 446 146 608 7.77e-84 270
MsG0280010881.01.T01 AT1G27080 34.211 456 280 7 5 446 57 506 2.60e-82 263
MsG0280010881.01.T01 AT3G54140 31.974 466 290 8 1 446 105 563 3.02e-82 264
MsG0280010881.01.T01 AT3G54140 31.974 466 290 8 1 446 105 563 3.02e-82 264
MsG0280010881.01.T01 AT1G27080 34.211 456 280 7 5 446 99 548 7.33e-82 263
MsG0280010881.01.T01 AT2G26690 35.153 458 269 10 5 444 64 511 1.32e-81 261
MsG0280010881.01.T01 AT2G26690 35.153 458 269 10 5 444 76 523 1.39e-81 262
MsG0280010881.01.T01 AT2G26690 35.153 458 269 10 5 444 109 556 4.91e-81 261
MsG0280010881.01.T01 AT5G01180 32.692 468 287 9 1 448 106 565 2.27e-80 259
MsG0280010881.01.T01 AT5G01180 32.692 468 287 9 1 448 106 565 2.27e-80 259
MsG0280010881.01.T01 AT5G01180 32.692 468 287 9 1 448 106 565 2.27e-80 259
MsG0280010881.01.T01 AT1G52190 33.475 469 274 11 5 443 106 566 4.30e-80 259
MsG0280010881.01.T01 AT1G62200 34.136 457 275 9 1 439 133 581 1.20e-79 258
MsG0280010881.01.T01 AT3G16180 34.120 466 272 11 5 443 108 565 1.66e-79 258
MsG0280010881.01.T01 AT5G62680 33.615 473 275 11 5 446 128 592 1.60e-78 256
MsG0280010881.01.T01 AT1G68570 35.118 467 276 8 5 448 78 540 1.72e-78 254
MsG0280010881.01.T01 AT1G68570 35.118 467 276 8 5 448 108 570 5.59e-78 254
MsG0280010881.01.T01 AT1G62200 32.784 485 273 11 1 439 133 610 3.40e-75 247
MsG0280010881.01.T01 AT1G62200 32.784 485 273 11 1 439 147 624 3.66e-75 247
MsG0280010881.01.T01 AT3G54450 29.545 440 275 7 37 448 112 544 2.94e-69 230
MsG0280010881.01.T01 AT2G02040 29.851 469 301 8 1 448 122 583 6.57e-68 227
MsG0280010881.01.T01 AT1G32450 32.301 452 279 10 17 444 134 582 1.88e-67 226
MsG0280010881.01.T01 AT5G46040 30.804 448 279 7 1 427 108 545 2.31e-67 226
MsG0280010881.01.T01 AT5G28470 31.385 462 292 11 5 447 102 557 2.20e-66 222
MsG0280010881.01.T01 AT1G12110 32.196 469 290 9 1 447 108 570 2.50e-66 223
MsG0280010881.01.T01 AT1G27040 30.407 467 281 11 5 445 80 528 3.23e-66 221
MsG0280010881.01.T01 AT1G27040 30.022 463 288 9 5 445 108 556 6.28e-66 221
MsG0280010881.01.T01 AT1G27040 30.022 463 288 9 5 445 112 560 7.58e-66 221
MsG0280010881.01.T01 AT3G21670 31.579 456 287 12 5 446 114 558 9.92e-66 221
MsG0280010881.01.T01 AT2G02020 30.786 471 255 10 1 448 123 545 1.64e-65 219
MsG0280010881.01.T01 AT5G46050 30.023 443 279 7 1 422 108 540 8.15e-65 219
MsG0280010881.01.T01 AT5G46050 30.206 437 274 7 7 422 2 428 8.15e-65 216
MsG0280010881.01.T01 AT5G28470 30.435 460 297 9 5 447 102 555 8.25e-65 218
MsG0280010881.01.T01 AT4G21680 31.478 467 287 11 5 445 113 572 1.53e-64 218
MsG0280010881.01.T01 AT5G19640 29.385 439 287 8 17 444 156 582 4.75e-64 217
MsG0280010881.01.T01 AT3G53960 29.787 470 296 11 1 448 118 575 8.75e-63 214
MsG0280010881.01.T01 AT1G33440 31.169 462 292 9 1 446 119 570 3.56e-62 212
MsG0280010881.01.T01 AT2G37900 29.935 461 299 9 1 448 40 489 9.92e-62 208
MsG0280010881.01.T01 AT1G69850 31.942 479 282 13 5 447 110 580 1.11e-61 210
MsG0280010881.01.T01 AT2G37900 29.935 461 299 9 1 448 119 568 9.58e-61 207
MsG0280010881.01.T01 AT1G69860 31.304 460 293 8 2 447 100 550 1.94e-60 206
MsG0280010881.01.T01 AT1G72125 31.498 454 259 12 25 448 127 558 5.11e-60 206
MsG0280010881.01.T01 AT1G22550 31.567 434 248 9 41 448 151 561 3.17e-58 201
MsG0280010881.01.T01 AT2G40460 29.622 476 282 13 1 447 105 556 1.21e-57 199
MsG0280010881.01.T01 AT1G72130 30.716 433 255 9 32 445 8 414 7.70e-57 194
MsG0280010881.01.T01 AT1G72130 30.716 433 255 9 32 445 8 414 7.70e-57 194
MsG0280010881.01.T01 AT1G22570 30.856 444 251 12 11 424 84 501 6.45e-56 194
MsG0280010881.01.T01 AT1G22570 30.856 444 251 12 11 424 121 538 1.27e-55 194
MsG0280010881.01.T01 AT1G72130 30.645 434 256 9 31 445 125 532 1.96e-55 192
MsG0280010881.01.T01 AT1G72120 29.730 444 245 9 41 448 142 554 7.82e-55 191
MsG0280010881.01.T01 AT1G59740 28.200 461 299 10 1 440 122 571 6.14e-54 190
MsG0280010881.01.T01 AT1G22540 30.490 469 270 11 1 443 111 549 3.22e-53 187
MsG0280010881.01.T01 AT1G72140 27.463 477 278 10 1 447 115 553 2.82e-51 182
MsG0280010881.01.T01 AT3G25260 27.233 459 273 7 1 443 102 515 2.07e-49 176
MsG0280010881.01.T01 AT5G13400 27.254 477 310 11 1 448 145 613 4.99e-49 177
MsG0280010881.01.T01 AT5G62730 28.412 447 257 10 42 447 103 527 3.88e-48 173
MsG0280010881.01.T01 AT5G62730 29.318 440 262 11 42 447 162 586 1.09e-47 173
MsG0280010881.01.T01 AT5G14940 26.637 443 266 11 42 444 116 539 2.27e-46 169
MsG0280010881.01.T01 AT3G25280 25.176 425 277 8 32 443 125 521 2.29e-38 146
MsG0280010881.01.T01 AT5G11570 34.016 244 148 6 210 443 236 476 5.79e-36 139
MsG0280010881.01.T01 AT3G01350 24.390 451 267 8 42 439 116 545 8.19e-36 139
MsG0280010881.01.T01 AT2G38100 25.977 435 269 13 38 445 76 484 2.14e-28 117
MsG0280010881.01.T01 AT2G38100 25.874 429 277 12 38 445 98 506 3.84e-28 117
MsG0280010881.01.T01 AT2G38100 25.977 435 269 13 38 445 92 500 5.48e-28 116
MsG0280010881.01.T01 AT2G02020 33.486 218 122 7 249 448 312 524 7.21e-26 110
MsG0280010881.01.T01 AT2G02020 33.728 169 104 2 1 164 123 288 8.79e-23 101

Find 88 sgRNAs with CRISPR-Local

Find 169 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTTACATTGAGGATAATT+TGG 0.105611 2:-76315490 MsG0280010881.01.T01:CDS
GATAATTTGGGTTGGGCTTT+GGG 0.135390 2:-76315477 MsG0280010881.01.T01:CDS
TTGGGTTGGGCTTTGGGGTT+TGG 0.178493 2:-76315471 MsG0280010881.01.T01:CDS
TTCACATTCTATGTTGCTTC+TGG 0.199343 2:-76315531 MsG0280010881.01.T01:CDS
GGATAATTTGGGTTGGGCTT+TGG 0.200907 2:-76315478 MsG0280010881.01.T01:CDS
TTCTTCTGGTCATGATGTTT+TGG 0.260860 2:-76315274 MsG0280010881.01.T01:CDS
CCAGGTTGGCATAAGATTAC+TGG 0.280111 2:-76313847 MsG0280010881.01.T01:CDS
GCTACAAGGAAGTGCAGTTT+TGG 0.285342 2:-76315376 MsG0280010881.01.T01:CDS
GTCCTAATATCAATTGGTTT+TGG 0.302104 2:-76315639 MsG0280010881.01.T01:CDS
CAATGATTTCAATGATTATA+GGG 0.302871 2:-76313582 MsG0280010881.01.T01:CDS
TAATTAGAATCCTACCTCTT+TGG 0.304616 2:-76314047 MsG0280010881.01.T01:CDS
GATTACTATGGTAGTTCTTC+TGG 0.306973 2:-76315288 MsG0280010881.01.T01:CDS
GCAATGATTTCAATGATTAT+AGG 0.313595 2:-76313583 MsG0280010881.01.T01:CDS
GTCAAGAAATGTGAGGAAAA+TGG 0.324649 2:+76313882 None:intergenic
ATTTACATTGAGGATAATTT+GGG 0.326688 2:-76315489 MsG0280010881.01.T01:CDS
CAATTAGTGTTGGTTGGTAT+TGG 0.327167 2:-76313682 MsG0280010881.01.T01:CDS
TTAGTCATGGATCGTTCTTT+AGG 0.329015 2:-76313961 MsG0280010881.01.T01:CDS
CACCAAAACCAATTGATATT+AGG 0.344369 2:+76315637 None:intergenic
TACTGGATGTTAGTAGTGTT+TGG 0.345072 2:-76313463 MsG0280010881.01.T01:CDS
ATGTTTCTATGTCTGTGTTA+TGG 0.348978 2:-76313714 MsG0280010881.01.T01:CDS
TTGCCATGATTTATTTCATC+AGG 0.374654 2:+76313499 None:intergenic
TAACACCGGGAAAAGGATTA+AGG 0.383763 2:-76315233 MsG0280010881.01.T01:intron
GGACATGTGTTGACTGTTCT+TGG 0.383903 2:-76313790 MsG0280010881.01.T01:CDS
GAAGTACAGCCAAGCTACTT+TGG 0.393641 2:+76313989 None:intergenic
CATTGAGGATAATTTGGGTT+GGG 0.396126 2:-76315484 MsG0280010881.01.T01:CDS
AAGCTACTTTGGATTGCTAT+AGG 0.411822 2:+76314000 None:intergenic
AGCATAGTCCTAATATCAAT+TGG 0.421222 2:-76315645 MsG0280010881.01.T01:CDS
CTTGACAGGGTGCTATTGCC+AGG 0.421420 2:-76313865 MsG0280010881.01.T01:CDS
ATAATTTGGGTTGGGCTTTG+GGG 0.424970 2:-76315476 MsG0280010881.01.T01:CDS
GCTTCTGGAGCTGCATTCAC+TGG 0.428108 2:-76315516 MsG0280010881.01.T01:CDS
GGATTGCTATAGGAGTTGAT+AGG 0.442808 2:+76314010 None:intergenic
CCTATGCCGCTTCAACGAAT+AGG 0.444488 2:-76313817 MsG0280010881.01.T01:CDS
TAATAGAATGTAACTTGTCC+TGG 0.454723 2:+76313643 None:intergenic
TCCAGAGTAGAGGATTACTA+TGG 0.467175 2:-76315300 MsG0280010881.01.T01:CDS
TTATATATAGAACTGTGTAT+TGG 0.469265 2:+76315667 None:intergenic
CACTGGAATTATTTACATTG+AGG 0.469878 2:-76315499 MsG0280010881.01.T01:CDS
ATTACATGCAAGCCACCTAC+TGG 0.472106 2:-76315693 MsG0280010881.01.T01:CDS
AATCAGTACTCCTACGAACT+TGG 0.476238 2:+76313527 None:intergenic
CCTATTCGTTGAAGCGGCAT+AGG 0.476519 2:+76313817 None:intergenic
TTTCCACAATTAGTGTTGGT+TGG 0.482453 2:-76313688 MsG0280010881.01.T01:CDS
CCAGTAATCTTATGCCAACC+TGG 0.485407 2:+76313847 None:intergenic
CCTCCGCTAACACCGGGAAA+AGG 0.486201 2:-76315240 MsG0280010881.01.T01:CDS
CGTTTCACTGCAGCATCACT+AGG 0.490573 2:-76315609 MsG0280010881.01.T01:CDS
ACAGGGTGCTATTGCCAGGT+TGG 0.495314 2:-76313861 MsG0280010881.01.T01:CDS
TCAAGAAATGTGAGGAAAAT+GGG 0.497572 2:+76313883 None:intergenic
ATGACAGAAACAGAACTAGC+TGG 0.499461 2:+76313922 None:intergenic
TACACTCAGATGGCTCAGTT+AGG 0.509635 2:-76314122 MsG0280010881.01.T01:CDS
AACAATTTCCACAATCACTT+AGG 0.511803 2:-76313618 MsG0280010881.01.T01:CDS
TTGTTGCATCTGTTCGTAAG+TGG 0.518784 2:-76315338 MsG0280010881.01.T01:CDS
TGTGTTGACTGTTCTTGGCA+TGG 0.519665 2:-76313785 MsG0280010881.01.T01:CDS
TTACCTGATGAAATAAATCA+TGG 0.531630 2:-76313502 MsG0280010881.01.T01:CDS
GTTGTTTCCACAATTAGTGT+TGG 0.534629 2:-76313692 MsG0280010881.01.T01:CDS
ACATTGAGGATAATTTGGGT+TGG 0.535748 2:-76315485 MsG0280010881.01.T01:CDS
ATACCAACCAACACTAATTG+TGG 0.537554 2:+76313685 None:intergenic
GCAAGGTTGATAATGTGTAC+TGG 0.547549 2:-76313480 MsG0280010881.01.T01:CDS
TTTCCTCACATTTCTTGACA+GGG 0.548202 2:-76313878 MsG0280010881.01.T01:CDS
TATAGCAATCCAAAGTAGCT+TGG 0.554810 2:-76313998 MsG0280010881.01.T01:CDS
AAGTTCGTAGGAGTACTGAT+TGG 0.558833 2:-76313525 MsG0280010881.01.T01:CDS
ACCATAGTAATCCTCTACTC+TGG 0.561531 2:+76315299 None:intergenic
AGTGCTGCCTCCGCTAACAC+CGG 0.566712 2:-76315247 MsG0280010881.01.T01:CDS
ATTGTTCCCTGCATGTGCAA+AGG 0.573909 2:+76315780 None:intergenic
TGGATGTTAGTAGTGTTTGG+AGG 0.575496 2:-76313460 MsG0280010881.01.T01:CDS
GAATCATTGCTACATGGATG+AGG 0.577520 2:+76315720 None:intergenic
TATCGGGCAGAAAAGCTACA+AGG 0.579586 2:-76315390 MsG0280010881.01.T01:CDS
GTGCTGCCTCCGCTAACACC+GGG 0.585063 2:-76315246 MsG0280010881.01.T01:CDS
TAACTGAGCCATCTGAGTGT+AGG 0.589021 2:+76314124 None:intergenic
TGACAGAAACAGAACTAGCT+GGG 0.591074 2:+76313923 None:intergenic
TGATGAAATAAATCATGGCA+AGG 0.602512 2:-76313497 MsG0280010881.01.T01:CDS
CCTACTCCTATTCGTTGAAG+CGG 0.605706 2:+76313811 None:intergenic
CTTTAATCGACCAAGTTCGT+AGG 0.606772 2:-76313537 MsG0280010881.01.T01:CDS
TAAGCTCTCATCCAGAGTAG+AGG 0.611738 2:-76315310 MsG0280010881.01.T01:CDS
TTTGACAAACTAGAACATCA+AGG 0.611836 2:-76315576 MsG0280010881.01.T01:CDS
CCGCTTCAACGAATAGGAGT+AGG 0.614584 2:-76313811 MsG0280010881.01.T01:CDS
TGTACTTCAAGCTTTAGTCA+TGG 0.614823 2:-76313974 MsG0280010881.01.T01:CDS
GCTGTGCACACTTCAACAAG+TGG 0.625265 2:-76314085 MsG0280010881.01.T01:CDS
GATGCAGACCTACACTCAGA+TGG 0.626629 2:-76314132 MsG0280010881.01.T01:CDS
GCTCAGTTAGGAAATCATCA+TGG 0.632715 2:-76314110 MsG0280010881.01.T01:CDS
ATGAATGAATCATTGCTACA+TGG 0.633109 2:+76315714 None:intergenic
GTGTATTGGATTCCAGTAGG+TGG 0.634548 2:+76315681 None:intergenic
ACTGTGTATTGGATTCCAGT+AGG 0.641176 2:+76315678 None:intergenic
AATATACTTGAAGTCCAAAG+AGG 0.641505 2:+76314033 None:intergenic
GGGGTTTGGAATTTGTGTCG+TGG 0.643071 2:-76315457 MsG0280010881.01.T01:CDS
TACTTGAAGTCCAAAGAGGT+AGG 0.655913 2:+76314037 None:intergenic
AAGAGACTCAAATTAGCACA+TGG 0.673591 2:-76313739 MsG0280010881.01.T01:CDS
GATGTGCTCCTAAGTGATTG+TGG 0.690361 2:+76313610 None:intergenic
CATCAGTTACTAGAGCTGCA+CGG 0.693655 2:+76314151 None:intergenic
GCACCCTGTCAAGAAATGTG+AGG 0.706666 2:+76313875 None:intergenic
CAGTTAGGAAATCATCATGG+AGG 0.743788 2:-76314107 MsG0280010881.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAGTAATTTTTAAAAAAAG+TGG + Chr2:76313985-76314004 None:intergenic 10.0%
!! ATCTATATATATGAAAATTC+AGG - Chr2:76314997-76315016 MsG0280010881.01.T01:intron 15.0%
!! ATTTACATTGAGGATAATTT+GGG - Chr2:76313690-76313709 MsG0280010881.01.T01:CDS 20.0%
!! CAATGATTTCAATGATTATA+GGG - Chr2:76315597-76315616 MsG0280010881.01.T01:CDS 20.0%
!! TATTTACATTGAGGATAATT+TGG - Chr2:76313689-76313708 MsG0280010881.01.T01:CDS 20.0%
!! TTATATATAGAACTGTGTAT+TGG + Chr2:76313515-76313534 None:intergenic 20.0%
!!! GTGCATACTTAATTTATTTT+GGG - Chr2:76314216-76314235 MsG0280010881.01.T01:intron 20.0%
! AAATATAAGCTAAGTGATAG+AGG + Chr2:76314743-76314762 None:intergenic 25.0%
! ACTTAATCAACAAGTAGATA+AGG - Chr2:76314641-76314660 MsG0280010881.01.T01:intron 25.0%
! CTACTACAACAGAAATATTA+TGG - Chr2:76314321-76314340 MsG0280010881.01.T01:intron 25.0%
! CTATCACTTAGCTTATATTT+AGG - Chr2:76314743-76314762 MsG0280010881.01.T01:intron 25.0%
! GCAATGATTTCAATGATTAT+AGG - Chr2:76315596-76315615 MsG0280010881.01.T01:CDS 25.0%
! TAAAAAAAGTGGTTAGTACT+TGG + Chr2:76313974-76313993 None:intergenic 25.0%
! TTACCTGATGAAATAAATCA+TGG - Chr2:76315677-76315696 MsG0280010881.01.T01:CDS 25.0%
!! ATAGCGTAGAATTCTTTTTA+AGG + Chr2:76314084-76314103 None:intergenic 25.0%
!! GGTGCATACTTAATTTATTT+TGG - Chr2:76314215-76314234 MsG0280010881.01.T01:intron 25.0%
!!! ATCAAGGAATATTTTTCAAC+TGG - Chr2:76313619-76313638 MsG0280010881.01.T01:CDS 25.0%
!!! TTATTTTGTGAAATCCATGT+GGG - Chr2:76314006-76314025 MsG0280010881.01.T01:CDS 25.0%
AACAATTTCCACAATCACTT+AGG - Chr2:76315561-76315580 MsG0280010881.01.T01:CDS 30.0%
AATATACTTGAAGTCCAAAG+AGG + Chr2:76315149-76315168 None:intergenic 30.0%
AGCATAGTCCTAATATCAAT+TGG - Chr2:76313534-76313553 MsG0280010881.01.T01:CDS 30.0%
ATAAATTAAGTATGCACCAG+TGG + Chr2:76314213-76314232 None:intergenic 30.0%
ATGAATGAATCATTGCTACA+TGG + Chr2:76313468-76313487 None:intergenic 30.0%
CACCAAAACCAATTGATATT+AGG + Chr2:76313545-76313564 None:intergenic 30.0%
CACTGGAATTATTTACATTG+AGG - Chr2:76313680-76313699 MsG0280010881.01.T01:CDS 30.0%
CTATATGTTTCATCCTAGAA+TGG + Chr2:76314442-76314461 None:intergenic 30.0%
GTGAATCTCATTACTAAGTA+GGG + Chr2:76314874-76314893 None:intergenic 30.0%
TAATTAGAATCCTACCTCTT+TGG - Chr2:76315132-76315151 MsG0280010881.01.T01:intron 30.0%
TATAATGCGATGTGTATAGA+AGG + Chr2:76314845-76314864 None:intergenic 30.0%
TATTGTGAATAGCATATCAG+AGG - Chr2:76314715-76314734 MsG0280010881.01.T01:intron 30.0%
TCAAGAAATGTGAGGAAAAT+GGG + Chr2:76315299-76315318 None:intergenic 30.0%
TGATGAAATAAATCATGGCA+AGG - Chr2:76315682-76315701 MsG0280010881.01.T01:CDS 30.0%
TGTGAATCTCATTACTAAGT+AGG + Chr2:76314875-76314894 None:intergenic 30.0%
TTGCCATGATTTATTTCATC+AGG + Chr2:76315683-76315702 None:intergenic 30.0%
TTTGACAAACTAGAACATCA+AGG - Chr2:76313603-76313622 MsG0280010881.01.T01:CDS 30.0%
TTTGAGAAAATGATGTCTAG+TGG + Chr2:76314571-76314590 None:intergenic 30.0%
! ATGTTTCTATGTCTGTGTTA+TGG - Chr2:76315465-76315484 MsG0280010881.01.T01:CDS 30.0%
! CATTTTCTCAAAGACAAGAT+TGG - Chr2:76314579-76314598 MsG0280010881.01.T01:intron 30.0%
! TAATAGAATGTAACTTGTCC+TGG + Chr2:76315539-76315558 None:intergenic 30.0%
! TCAACGCTTACTCTTTTATT+TGG + Chr2:76314907-76314926 None:intergenic 30.0%
!! AACTAGCTGGGATTTTAAAA+TGG + Chr2:76315247-76315266 None:intergenic 30.0%
!! GTCCTAATATCAATTGGTTT+TGG - Chr2:76313540-76313559 MsG0280010881.01.T01:CDS 30.0%
!! GTTATTTTGTGAAATCCATG+TGG - Chr2:76314005-76314024 MsG0280010881.01.T01:CDS 30.0%
!!! ACTAGCTGGGATTTTAAAAT+GGG + Chr2:76315246-76315265 None:intergenic 30.0%
!!! CTAATATCAATTGGTTTTGG+TGG - Chr2:76313543-76313562 MsG0280010881.01.T01:CDS 30.0%
!!! TCTTTTTAAGGCTTGCATAT+GGG + Chr2:76314072-76314091 None:intergenic 30.0%
!!! TGTTGGGTTATCGATTTTAT+CGG - Chr2:76313772-76313791 MsG0280010881.01.T01:CDS 30.0%
!!! TTCTTTTTAAGGCTTGCATA+TGG + Chr2:76314073-76314092 None:intergenic 30.0%
AAGAGACTCAAATTAGCACA+TGG - Chr2:76315440-76315459 MsG0280010881.01.T01:CDS 35.0%
ACAATTCCTTCCTATGTACA+AGG + Chr2:76314688-76314707 None:intergenic 35.0%
ACATTGAGGATAATTTGGGT+TGG - Chr2:76313694-76313713 MsG0280010881.01.T01:CDS 35.0%
ATACCAACCAACACTAATTG+TGG + Chr2:76315497-76315516 None:intergenic 35.0%
CAATGTGTCTGAAAAATGGT+TGG + Chr2:76314389-76314408 None:intergenic 35.0%
CATATTCTCCTTTCAATGCT+TGG + Chr2:76314942-76314961 None:intergenic 35.0%
CATGACCAAGATATGACATT+AGG + Chr2:76314242-76314261 None:intergenic 35.0%
CTCAAGTCAACTATAACACA+TGG - Chr2:76314104-76314123 MsG0280010881.01.T01:CDS 35.0%
GATTACTATGGTAGTTCTTC+TGG - Chr2:76313891-76313910 MsG0280010881.01.T01:CDS 35.0%
GTCAAGAAATGTGAGGAAAA+TGG + Chr2:76315300-76315319 None:intergenic 35.0%
TACTGGATGTTAGTAGTGTT+TGG - Chr2:76315716-76315735 MsG0280010881.01.T01:CDS 35.0%
TATAGCAATCCAAAGTAGCT+TGG - Chr2:76315181-76315200 MsG0280010881.01.T01:intron 35.0%
TCCCTCAATAAAAGTCTCAT+TGG - Chr2:76314143-76314162 MsG0280010881.01.T01:CDS 35.0%
TTAGTCATGGATCGTTCTTT+AGG - Chr2:76315218-76315237 MsG0280010881.01.T01:intron 35.0%
TTTCATCCTAGAATGGAAAC+TGG + Chr2:76314435-76314454 None:intergenic 35.0%
TTTCCTCACATTTCTTGACA+GGG - Chr2:76315301-76315320 MsG0280010881.01.T01:CDS 35.0%
! AAGCTACTTTGGATTGCTAT+AGG + Chr2:76315182-76315201 None:intergenic 35.0%
! AGCCAATGAGACTTTTATTG+AGG + Chr2:76314148-76314167 None:intergenic 35.0%
! CATTGAGGATAATTTGGGTT+GGG - Chr2:76313695-76313714 MsG0280010881.01.T01:CDS 35.0%
! GCCAATGAGACTTTTATTGA+GGG + Chr2:76314147-76314166 None:intergenic 35.0%
! GTTGTTTCCACAATTAGTGT+TGG - Chr2:76315487-76315506 MsG0280010881.01.T01:CDS 35.0%
! TGTACTTCAAGCTTTAGTCA+TGG - Chr2:76315205-76315224 MsG0280010881.01.T01:intron 35.0%
! TTCACATTCTATGTTGCTTC+TGG - Chr2:76313648-76313667 MsG0280010881.01.T01:CDS 35.0%
! TTCTTCTGGTCATGATGTTT+TGG - Chr2:76313905-76313924 MsG0280010881.01.T01:CDS 35.0%
! TTTTCCTCACATTTCTTGAC+AGG - Chr2:76315300-76315319 MsG0280010881.01.T01:CDS 35.0%
!! CAACCATTTTTCAGACACAT+TGG - Chr2:76314387-76314406 MsG0280010881.01.T01:intron 35.0%
!! CAATTAGTGTTGGTTGGTAT+TGG - Chr2:76315497-76315516 MsG0280010881.01.T01:CDS 35.0%
!! GAAAGTTTCCAAGCATTGAA+AGG - Chr2:76314931-76314950 MsG0280010881.01.T01:intron 35.0%
!! GGTGTGGTTATTTTCTTGTT+GGG - Chr2:76313756-76313775 MsG0280010881.01.T01:CDS 35.0%
!! TGGATTAGCACATAGATAAG+TGG + Chr2:76314415-76314434 None:intergenic 35.0%
!! TGGTGTGGTTATTTTCTTGT+TGG - Chr2:76313755-76313774 MsG0280010881.01.T01:CDS 35.0%
!! TTTCCACAATTAGTGTTGGT+TGG - Chr2:76315491-76315510 MsG0280010881.01.T01:CDS 35.0%
!!! CTAGCTGGGATTTTAAAATG+GGG + Chr2:76315245-76315264 None:intergenic 35.0%
!!! GTTGGGTTATCGATTTTATC+GGG - Chr2:76313773-76313792 MsG0280010881.01.T01:CDS 35.0%
AATCAGTACTCCTACGAACT+TGG + Chr2:76315655-76315674 None:intergenic 40.0%
ACCATAGTAATCCTCTACTC+TGG + Chr2:76313883-76313902 None:intergenic 40.0%
ACTGTGTATTGGATTCCAGT+AGG + Chr2:76313504-76313523 None:intergenic 40.0%
ATGACAGAAACAGAACTAGC+TGG + Chr2:76315260-76315279 None:intergenic 40.0%
ATTCCTTCCTATGTACAAGG+AGG + Chr2:76314685-76314704 None:intergenic 40.0%
CAACAGTTGCTTCAAGAACT+TGG - Chr2:76314347-76314366 MsG0280010881.01.T01:intron 40.0%
CAGTTAGGAAATCATCATGG+AGG - Chr2:76315072-76315091 MsG0280010881.01.T01:intron 40.0%
CTTTAATCGACCAAGTTCGT+AGG - Chr2:76315642-76315661 MsG0280010881.01.T01:CDS 40.0%
GAATCATTGCTACATGGATG+AGG + Chr2:76313462-76313481 None:intergenic 40.0%
GCTAATAATGTGAACCCACA+TGG + Chr2:76314023-76314042 None:intergenic 40.0%
GCTAATCCAGTTTCCATTCT+AGG - Chr2:76314426-76314445 MsG0280010881.01.T01:intron 40.0%
GCTCAGTTAGGAAATCATCA+TGG - Chr2:76315069-76315088 MsG0280010881.01.T01:intron 40.0%
TAACACCGGGAAAAGGATTA+AGG - Chr2:76313946-76313965 MsG0280010881.01.T01:CDS 40.0%
TACTTGAAGTCCAAAGAGGT+AGG + Chr2:76315145-76315164 None:intergenic 40.0%
TCATTCACCTCCTTGTACAT+AGG - Chr2:76314675-76314694 MsG0280010881.01.T01:intron 40.0%
TCCAGAGTAGAGGATTACTA+TGG - Chr2:76313879-76313898 MsG0280010881.01.T01:CDS 40.0%
TGACAGAAACAGAACTAGCT+GGG + Chr2:76315259-76315278 None:intergenic 40.0%
TGGATGTTAGTAGTGTTTGG+AGG - Chr2:76315719-76315738 MsG0280010881.01.T01:CDS 40.0%
TTGGGCCTAATGTCATATCT+TGG - Chr2:76314234-76314253 MsG0280010881.01.T01:intron 40.0%
TTGTTGCATCTGTTCGTAAG+TGG - Chr2:76313841-76313860 MsG0280010881.01.T01:CDS 40.0%
! GAGACTTTTATTGAGGGACT+TGG + Chr2:76314141-76314160 None:intergenic 40.0%
! GGAGAAGCTTTTCATTTTCC+AGG - Chr2:76315518-76315537 MsG0280010881.01.T01:CDS 40.0%
! GGATTGCTATAGGAGTTGAT+AGG + Chr2:76315172-76315191 None:intergenic 40.0%
! TGGCTTTTGTGATGCAGATT+GGG - Chr2:76314163-76314182 MsG0280010881.01.T01:CDS 40.0%
! TGGTACCTTAATCCTTTTCC+CGG + Chr2:76313954-76313973 None:intergenic 40.0%
!! AAGTTCGTAGGAGTACTGAT+TGG - Chr2:76315654-76315673 MsG0280010881.01.T01:CDS 40.0%
!! ATAATTTGGGTTGGGCTTTG+GGG - Chr2:76313703-76313722 MsG0280010881.01.T01:CDS 40.0%
!! GATAATTTGGGTTGGGCTTT+GGG - Chr2:76313702-76313721 MsG0280010881.01.T01:CDS 40.0%
!! GCAAGGTTGATAATGTGTAC+TGG - Chr2:76315699-76315718 MsG0280010881.01.T01:CDS 40.0%
!! TTGGCTTTTGTGATGCAGAT+TGG - Chr2:76314162-76314181 MsG0280010881.01.T01:CDS 40.0%
!!! AGGAAGTGCAGTTTTGGATT+TGG - Chr2:76313809-76313828 MsG0280010881.01.T01:CDS 40.0%
!!! GGAAGTGCAGTTTTGGATTT+GGG - Chr2:76313810-76313829 MsG0280010881.01.T01:CDS 40.0%
ACTTCAGATCGGAAATCCAC+TGG - Chr2:76314194-76314213 MsG0280010881.01.T01:intron 45.0%
ATTACATGCAAGCCACCTAC+TGG - Chr2:76313486-76313505 MsG0280010881.01.T01:CDS 45.0%
CATCAGTTACTAGAGCTGCA+CGG + Chr2:76315031-76315050 None:intergenic 45.0%
CCAGTAATCTTATGCCAACC+TGG + Chr2:76315335-76315354 None:intergenic 45.0%
CCTACTCCTATTCGTTGAAG+CGG + Chr2:76315371-76315390 None:intergenic 45.0%
CGAAGATACCTCCATCTTGA+GGG - Chr2:76314608-76314627 MsG0280010881.01.T01:intron 45.0%
CTTGCATATGGGTCATTGTG+GGG + Chr2:76314061-76314080 None:intergenic 45.0%
GAAGTACAGCCAAGCTACTT+TGG + Chr2:76315193-76315212 None:intergenic 45.0%
GATGTGCTCCTAAGTGATTG+TGG + Chr2:76315572-76315591 None:intergenic 45.0%
GCGCCAATGTGTCTGAAAAA+TGG + Chr2:76314393-76314412 None:intergenic 45.0%
GCTTGCATATGGGTCATTGT+GGG + Chr2:76314062-76314081 None:intergenic 45.0%
GTGTATTGGATTCCAGTAGG+TGG + Chr2:76313501-76313520 None:intergenic 45.0%
TAACTGAGCCATCTGAGTGT+AGG + Chr2:76315058-76315077 None:intergenic 45.0%
TAAGCTCTCATCCAGAGTAG+AGG - Chr2:76313869-76313888 MsG0280010881.01.T01:CDS 45.0%
TACACTCAGATGGCTCAGTT+AGG - Chr2:76315057-76315076 MsG0280010881.01.T01:intron 45.0%
TACAGTCGCACGATTGTCAA+CGG - Chr2:76314274-76314293 MsG0280010881.01.T01:intron 45.0%
TATCGGGCAGAAAAGCTACA+AGG - Chr2:76313789-76313808 MsG0280010881.01.T01:CDS 45.0%
TCACCTCCTTGTACATAGGA+AGG - Chr2:76314679-76314698 MsG0280010881.01.T01:intron 45.0%
TCGAAGATACCTCCATCTTG+AGG - Chr2:76314607-76314626 MsG0280010881.01.T01:intron 45.0%
TCTAGTGGCAGATAGAGGTT+TGG + Chr2:76314556-76314575 None:intergenic 45.0%
TGATGTCTAGTGGCAGATAG+AGG + Chr2:76314561-76314580 None:intergenic 45.0%
TGGTGAGCAAATCAGCTAGT+TGG + Chr2:76314536-76314555 None:intergenic 45.0%
TTGCATATGGGTCATTGTGG+GGG + Chr2:76314060-76314079 None:intergenic 45.0%
! CCAGGTTGGCATAAGATTAC+TGG - Chr2:76315332-76315351 MsG0280010881.01.T01:CDS 45.0%
! TTTTGTGATGCAGATTGGGC+TGG - Chr2:76314167-76314186 MsG0280010881.01.T01:intron 45.0%
!! AATCCTTTTCCCGGTGTTAG+CGG + Chr2:76313945-76313964 None:intergenic 45.0%
!! GCTACAAGGAAGTGCAGTTT+TGG - Chr2:76313803-76313822 MsG0280010881.01.T01:CDS 45.0%
!! GGACATGTGTTGACTGTTCT+TGG - Chr2:76315389-76315408 MsG0280010881.01.T01:CDS 45.0%
!! GGATAATTTGGGTTGGGCTT+TGG - Chr2:76313701-76313720 MsG0280010881.01.T01:CDS 45.0%
!! TCAGCTAGTTGGTGACTTGT+CGG + Chr2:76314525-76314544 None:intergenic 45.0%
!! TGTGTTGACTGTTCTTGGCA+TGG - Chr2:76315394-76315413 MsG0280010881.01.T01:CDS 45.0%
!!! TGTGTCGTGGCTACTTTTGT+TGG - Chr2:76313735-76313754 MsG0280010881.01.T01:CDS 45.0%
ACCTCCATCTTGAGGGCTAT+CGG - Chr2:76314615-76314634 MsG0280010881.01.T01:intron 50.0%
CCGCTTCAACGAATAGGAGT+AGG - Chr2:76315368-76315387 MsG0280010881.01.T01:CDS 50.0%
CCTATTCGTTGAAGCGGCAT+AGG + Chr2:76315365-76315384 None:intergenic 50.0%
CGTTTCACTGCAGCATCACT+AGG - Chr2:76313570-76313589 MsG0280010881.01.T01:CDS 50.0%
GATGCAGACCTACACTCAGA+TGG - Chr2:76315047-76315066 MsG0280010881.01.T01:intron 50.0%
GCACCCTGTCAAGAAATGTG+AGG + Chr2:76315307-76315326 None:intergenic 50.0%
GCTGTGCACACTTCAACAAG+TGG - Chr2:76315094-76315113 MsG0280010881.01.T01:intron 50.0%
GGCTTGCATATGGGTCATTG+TGG + Chr2:76314063-76314082 None:intergenic 50.0%
GGGCTGGAGATACTTCAGAT+CGG - Chr2:76314183-76314202 MsG0280010881.01.T01:intron 50.0%
GTTGACAATCGTGCGACTGT+AGG + Chr2:76314275-76314294 None:intergenic 50.0%
TACTCCGATAGCCCTCAAGA+TGG + Chr2:76314622-76314641 None:intergenic 50.0%
! CCTATGCCGCTTCAACGAAT+AGG - Chr2:76315362-76315381 MsG0280010881.01.T01:CDS 50.0%
! GGGGTTTGGAATTTGTGTCG+TGG - Chr2:76313722-76313741 MsG0280010881.01.T01:CDS 50.0%
!!! CGTGGCTACTTTTGTTGGTG+TGG - Chr2:76313740-76313759 MsG0280010881.01.T01:CDS 50.0%
TCCGATAGCCCTCAAGATGG+AGG + Chr2:76314619-76314638 None:intergenic 55.0%
!! ACAGGGTGCTATTGCCAGGT+TGG - Chr2:76315318-76315337 MsG0280010881.01.T01:CDS 55.0%
!! CTTGACAGGGTGCTATTGCC+AGG - Chr2:76315314-76315333 MsG0280010881.01.T01:CDS 55.0%
!! GCTTCTGGAGCTGCATTCAC+TGG - Chr2:76313663-76313682 MsG0280010881.01.T01:CDS 55.0%
!! TTGGGTTGGGCTTTGGGGTT+TGG - Chr2:76313708-76313727 MsG0280010881.01.T01:CDS 55.0%
AGTGCTGCCTCCGCTAACAC+CGG - Chr2:76313932-76313951 MsG0280010881.01.T01:CDS 60.0%
CCTCCGCTAACACCGGGAAA+AGG - Chr2:76313939-76313958 MsG0280010881.01.T01:CDS 60.0%
!! CCTTTTCCCGGTGTTAGCGG+AGG + Chr2:76313942-76313961 None:intergenic 60.0%
GTGCTGCCTCCGCTAACACC+GGG - Chr2:76313933-76313952 MsG0280010881.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 76313402 76315799 76313402 ID=MsG0280010881.01;Name=MsG0280010881.01
Chr2 mRNA 76313402 76315799 76313402 ID=MsG0280010881.01.T01;Parent=MsG0280010881.01;Name=MsG0280010881.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|1|1|2|0|448
Chr2 exon 76315234 76315799 76315234 ID=MsG0280010881.01.T01:exon:11298;Parent=MsG0280010881.01.T01
Chr2 exon 76313402 76314182 76313402 ID=MsG0280010881.01.T01:exon:11297;Parent=MsG0280010881.01.T01
Chr2 CDS 76315234 76315799 76315234 ID=MsG0280010881.01.T01:cds;Parent=MsG0280010881.01.T01
Chr2 CDS 76313402 76314182 76313402 ID=MsG0280010881.01.T01:cds;Parent=MsG0280010881.01.T01
Gene Sequence

>MsG0280010881.01.T01

TTGCACATGCAGGGAACAATTATTTTGTTTTTGACAGCAACGATCGATTTGTTAAAGCCTCATCCATGTAGCAATGATTCATTCATTACATGCAAGCCACCTACTGGAATCCAATACACAGTTCTATATATAAGCATAGTCCTAATATCAATTGGTTTTGGTGGTTCACGTTTCACTGCAGCATCACTAGGAGCAAATCAATTTGACAAACTAGAACATCAAGGAATATTTTTCAACTGGTACTTTTTCACATTCTATGTTGCTTCTGGAGCTGCATTCACTGGAATTATTTACATTGAGGATAATTTGGGTTGGGCTTTGGGGTTTGGAATTTGTGTCGTGGCTACTTTTGTTGGTGTGGTTATTTTCTTGTTGGGTTATCGATTTTATCGGGCAGAAAAGCTACAAGGAAGTGCAGTTTTGGATTTGGGACGTGTTTTTGTTGCATCTGTTCGTAAGTGGAAGTGTAAGCTCTCATCCAGAGTAGAGGATTACTATGGTAGTTCTTCTGGTCATGATGTTTTGGTTCAAGTGCTGCCTCCGCTAACACCGGGAAAAGGATTAAGGTTCTTCAACCGTGCAGCTCTAGTAACTGATGCAGACCTACACTCAGATGGCTCAGTTAGGAAATCATCATGGAGGCTGTGCACACTTCAACAAGTGGAAGATTTTAAAAAAATAATTAGAATCCTACCTCTTTGGACTTCAAGTATATTCCTATCAACTCCTATAGCAATCCAAAGTAGCTTGGCTGTACTTCAAGCTTTAGTCATGGATCGTTCTTTAGGACCCCATTTTAAAATCCCAGCTAGTTCTGTTTCTGTCATAGTCTTAATATCAGCACCCATTTTCCTCACATTTCTTGACAGGGTGCTATTGCCAGGTTGGCATAAGATTACTGGAAAAACGCCTATGCCGCTTCAACGAATAGGAGTAGGACATGTGTTGACTGTTCTTGGCATGGTTGTCTCTGCTCTTGTTGAATCAAAGAGACTCAAATTAGCACATGGACATGTTTCTATGTCTGTGTTATGGTTGTTTCCACAATTAGTGTTGGTTGGTATTGGAGAAGCTTTTCATTTTCCAGGACAAGTTACATTCTATTATCAACAATTTCCACAATCACTTAGGAGCACATCAACAGCAATGATTTCAATGATTATAGGGATTGCTTTTTACTTGAGCGCTGCTTTAATCGACCAAGTTCGTAGGAGTACTGATTGGTTACCTGATGAAATAAATCATGGCAAGGTTGATAATGTGTACTGGATGTTAGTAGTGTTTGGAGGTATCAACTTTGTGTATTACTTACTGTGCTCTATTTCTTACAAGTATGAAAATGTTTAA

Protein sequence

>MsG0280010881.01.T01

LHMQGTIILFLTATIDLLKPHPCSNDSFITCKPPTGIQYTVLYISIVLISIGFGGSRFTAASLGANQFDKLEHQGIFFNWYFFTFYVASGAAFTGIIYIEDNLGWALGFGICVVATFVGVVIFLLGYRFYRAEKLQGSAVLDLGRVFVASVRKWKCKLSSRVEDYYGSSSGHDVLVQVLPPLTPGKGLRFFNRAALVTDADLHSDGSVRKSSWRLCTLQQVEDFKKIIRILPLWTSSIFLSTPIAIQSSLAVLQALVMDRSLGPHFKIPASSVSVIVLISAPIFLTFLDRVLLPGWHKITGKTPMPLQRIGVGHVLTVLGMVVSALVESKRLKLAHGHVSMSVLWLFPQLVLVGIGEAFHFPGQVTFYYQQFPQSLRSTSTAMISMIIGIAFYLSAALIDQVRRSTDWLPDEINHGKVDNVYWMLVVFGGINFVYYLLCSISYKYENV*