AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011045.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011045.01.T01 MTR_2g098240 94.517 383 18 3 1 381 1 382 0.0 710
MsG0280011045.01.T01 MTR_4g065080 64.232 397 96 9 6 357 4 399 8.82e-174 491
MsG0280011045.01.T01 MTR_8g011780 44.507 355 162 6 9 333 12 361 3.77e-97 296
MsG0280011045.01.T01 MTR_7g053200 41.690 355 174 6 10 336 6 355 6.15e-90 277
MsG0280011045.01.T01 MTR_3g010260 38.205 390 191 10 11 355 411 795 1.99e-77 254
MsG0280011045.01.T01 MTR_1g060790 40.000 360 173 8 12 333 467 821 1.54e-76 253
MsG0280011045.01.T01 MTR_4g113790 39.037 374 174 7 12 334 88 458 1.88e-76 244
MsG0280011045.01.T01 MTR_2g027240 38.525 366 176 9 12 333 201 561 2.17e-75 245
MsG0280011045.01.T01 MTR_2g062850 39.200 375 181 10 1 337 159 524 5.95e-75 243
MsG0280011045.01.T01 MTR_8g446990 39.011 364 179 9 8 333 125 483 1.62e-74 241
MsG0280011045.01.T01 MTR_8g070530 40.549 328 172 5 10 331 592 902 1.02e-73 246
MsG0280011045.01.T01 MTR_2g095980 43.425 327 169 7 10 330 366 682 2.05e-73 242
MsG0280011045.01.T01 MTR_6g004720 38.056 360 179 8 12 333 248 601 3.84e-73 239
MsG0280011045.01.T01 MTR_2g085065 39.466 337 167 8 23 323 97 432 1.13e-72 234
MsG0280011045.01.T01 MTR_7g081665 38.830 376 176 10 11 343 360 724 5.61e-72 239
MsG0280011045.01.T01 MTR_2g095980 43.425 327 169 7 10 330 621 937 7.79e-72 242
MsG0280011045.01.T01 MTR_2g095980 43.425 327 169 7 10 330 621 937 1.01e-71 242
MsG0280011045.01.T01 MTR_8g006870 39.542 349 171 7 12 323 367 712 1.41e-71 238
MsG0280011045.01.T01 MTR_7g104180 37.368 380 188 9 12 353 489 856 3.10e-71 239
MsG0280011045.01.T01 MTR_7g033640 36.264 364 187 7 12 333 229 589 2.21e-70 232
MsG0280011045.01.T01 MTR_4g061610 41.692 331 159 8 8 330 637 941 2.76e-69 235
MsG0280011045.01.T01 MTR_2g069990 40.541 333 178 6 12 330 91 417 3.51e-69 225
MsG0280011045.01.T01 MTR_2g018990 38.202 356 182 10 12 333 74 425 5.58e-69 224
MsG0280011045.01.T01 MTR_8g089420 36.667 360 184 11 12 333 70 423 1.50e-68 223
MsG0280011045.01.T01 MTR_4g107280 32.641 337 171 8 20 345 92 383 4.54e-48 168
MsG0280011045.01.T01 MTR_7g073520 31.804 327 172 7 12 333 143 423 1.19e-46 166
MsG0280011045.01.T01 MTR_6g470940 30.479 397 218 12 3 379 863 1221 2.21e-46 170
MsG0280011045.01.T01 MTR_5g069000 31.268 339 209 9 3 334 748 1069 4.42e-44 164
MsG0280011045.01.T01 MTR_4g035835 31.268 339 209 9 3 334 744 1065 8.67e-44 162
MsG0280011045.01.T01 MTR_2g040150 30.871 379 219 16 12 369 108 464 8.63e-39 145
MsG0280011045.01.T01 MTR_4g107280 30.699 329 149 8 20 345 92 344 9.22e-39 142
MsG0280011045.01.T01 MTR_3g104700 29.843 382 223 14 12 370 89 448 9.87e-37 139
MsG0280011045.01.T01 MTR_1g042700 28.857 350 201 9 12 337 110 435 1.76e-36 139
MsG0280011045.01.T01 MTR_1g019340 29.917 361 218 13 12 354 103 446 2.19e-36 138
MsG0280011045.01.T01 MTR_1g019340 30.395 329 203 10 12 326 103 419 3.08e-36 138
MsG0280011045.01.T01 MTR_1g069735 28.531 354 225 11 12 352 115 453 9.16e-35 134
MsG0280011045.01.T01 MTR_1g069735 28.531 354 225 11 12 352 115 453 1.11e-34 134
MsG0280011045.01.T01 MTR_3g104700 28.571 399 223 14 12 370 89 465 1.20e-34 134
MsG0280011045.01.T01 MTR_1g069735 28.531 354 225 11 12 352 115 453 1.57e-34 134
MsG0280011045.01.T01 MTR_1g075880 27.451 357 223 12 12 349 112 451 1.93e-33 130
MsG0280011045.01.T01 MTR_7g097150 28.729 362 214 14 12 352 115 453 8.23e-33 129
MsG0280011045.01.T01 MTR_1g442790 29.545 352 221 13 15 351 108 447 1.10e-32 128
MsG0280011045.01.T01 MTR_1g442790 29.545 352 221 13 15 351 108 447 1.13e-32 129
MsG0280011045.01.T01 MTR_3g110405 28.767 292 155 7 14 300 34 277 7.82e-29 114
MsG0280011045.01.T01 MTR_8g035890 27.667 300 156 7 10 300 9 256 1.24e-28 113
MsG0280011045.01.T01 MTR_1g090917 28.659 328 186 8 8 329 47 332 1.45e-28 116
MsG0280011045.01.T01 MTR_1g090917 28.659 328 186 8 8 329 47 332 1.47e-28 116
MsG0280011045.01.T01 MTR_8g040300 26.910 301 159 7 10 301 3 251 3.28e-28 112
MsG0280011045.01.T01 MTR_6g087000 29.963 267 123 7 113 374 855 1062 1.59e-26 112
MsG0280011045.01.T01 MTR_3g095620 27.869 305 160 9 23 317 31 285 1.95e-26 107
MsG0280011045.01.T01 MTR_7g116390 28.197 305 155 9 10 300 9 263 5.70e-26 106
MsG0280011045.01.T01 MTR_2g020380 27.523 327 181 10 14 337 1 274 1.31e-25 109
MsG0280011045.01.T01 MTR_1g080020 28.767 292 141 8 23 300 15 253 1.43e-25 104
MsG0280011045.01.T01 MTR_1g090917 30.992 242 127 5 92 329 2 207 4.64e-25 105
MsG0280011045.01.T01 MTR_1g090917 30.992 242 127 5 92 329 2 207 5.76e-25 104
MsG0280011045.01.T01 MTR_3g099920 27.019 322 179 8 1 316 1 272 2.24e-24 104
MsG0280011045.01.T01 MTR_5g045190 25.000 320 186 7 20 335 242 511 5.16e-24 104
MsG0280011045.01.T01 MTR_4g006970 25.617 324 184 11 1 316 1 275 1.02e-21 96.7
MsG0280011045.01.T01 MTR_1g076370 27.157 313 172 10 1 304 5 270 1.13e-21 96.3
MsG0280011045.01.T01 MTR_2g016340 25.281 356 192 13 21 370 16 303 1.31e-21 96.3
MsG0280011045.01.T01 MTR_7g113490 25.321 312 168 9 21 317 72 333 2.57e-21 96.3
MsG0280011045.01.T01 MTR_3g466400 26.000 300 170 9 21 316 18 269 2.70e-21 95.5
MsG0280011045.01.T01 MTR_8g024100 25.166 302 168 9 23 312 21 276 3.47e-21 95.9
MsG0280011045.01.T01 MTR_6g012980 27.215 316 164 10 11 316 67 326 3.17e-20 92.0
MsG0280011045.01.T01 MTR_3g099767 25.161 310 167 9 23 323 118 371 4.51e-20 92.0
MsG0280011045.01.T01 MTR_4g132070 26.582 316 152 12 21 316 95 350 5.80e-20 92.0
MsG0280011045.01.T01 MTR_7g106710 27.508 309 154 11 23 316 141 394 1.44e-19 90.1
MsG0280011045.01.T01 MTR_2g078740 27.500 240 128 6 20 258 18 212 1.76e-19 90.9
MsG0280011045.01.T01 MTR_2g078740 27.500 240 128 6 20 258 18 212 1.93e-19 90.5
MsG0280011045.01.T01 MTR_2g078740 27.500 240 128 6 20 258 18 212 2.00e-19 90.5
MsG0280011045.01.T01 MTR_7g106710 27.508 309 154 11 23 316 141 394 2.79e-19 89.7
MsG0280011045.01.T01 MTR_8g086380 26.230 305 164 11 21 316 30 282 3.62e-19 89.4
MsG0280011045.01.T01 MTR_3g466480 25.641 312 163 10 21 313 25 286 4.39e-19 89.0
MsG0280011045.01.T01 MTR_7g106710 27.508 309 154 11 23 316 141 394 6.85e-19 88.6
MsG0280011045.01.T01 MTR_7g106710 27.508 309 154 11 23 316 141 394 8.35e-19 88.6
MsG0280011045.01.T01 MTR_1g013700 23.944 284 168 7 21 300 17 256 8.86e-19 87.8
MsG0280011045.01.T01 MTR_5g075100 26.552 290 154 10 21 300 27 267 2.49e-18 86.7
MsG0280011045.01.T01 MTR_4g029020 24.074 378 202 14 21 375 16 331 2.51e-18 86.7
MsG0280011045.01.T01 MTR_5g075060 23.529 306 170 11 21 316 16 267 3.06e-18 86.3
MsG0280011045.01.T01 MTR_7g072575 24.506 253 144 6 21 270 16 224 5.48e-18 85.5
MsG0280011045.01.T01 MTR_2g100030 25.338 296 175 8 41 319 42 308 7.53e-18 85.5
MsG0280011045.01.T01 MTR_1g100250 25.141 354 181 13 4 337 395 684 9.57e-18 85.5
MsG0280011045.01.T01 MTR_1g048630 22.742 299 179 6 20 316 10 258 9.67e-18 85.9
MsG0280011045.01.T01 MTR_3g088715 39.450 109 55 3 213 316 24 126 1.66e-17 79.0
MsG0280011045.01.T01 MTR_1g040875 27.622 286 156 10 21 300 28 268 3.86e-17 82.8
MsG0280011045.01.T01 MTR_8g093730 24.843 318 169 10 13 316 295 556 5.16e-17 83.2
MsG0280011045.01.T01 MTR_5g067150 22.830 311 165 11 21 316 13 263 1.65e-16 80.5
MsG0280011045.01.T01 MTR_4g128820 24.437 311 175 11 13 316 6 263 1.76e-16 80.9
MsG0280011045.01.T01 MTR_5g067150 22.830 311 165 11 21 316 13 263 2.42e-16 80.5
MsG0280011045.01.T01 MTR_5g067150 22.830 311 165 11 21 316 13 263 2.44e-16 80.5
MsG0280011045.01.T01 MTR_4g051648 21.562 320 190 6 20 333 11 275 3.99e-16 80.9
MsG0280011045.01.T01 MTR_1g081000 22.727 242 143 2 20 260 7 205 4.81e-16 80.1
MsG0280011045.01.T01 MTR_1g081000 22.727 242 143 2 20 260 7 205 4.97e-16 80.1
MsG0280011045.01.T01 MTR_3g096230 24.691 243 132 5 21 258 248 444 8.72e-16 79.3
MsG0280011045.01.T01 MTR_3g096230 24.691 243 132 5 21 258 248 444 1.49e-15 78.6
MsG0280011045.01.T01 MTR_1g103760 24.138 261 149 8 21 277 16 231 7.13e-15 76.3
MsG0280011045.01.T01 MTR_1g105290 24.206 252 141 5 21 265 59 267 1.10e-14 75.9
MsG0280011045.01.T01 MTR_1g105290 24.206 252 141 5 21 265 59 267 1.15e-14 75.9
MsG0280011045.01.T01 MTR_1g105290 24.206 252 141 5 21 265 59 267 1.22e-14 75.9
MsG0280011045.01.T01 MTR_4g075410 25.424 236 134 1 23 258 26 219 1.32e-14 76.3
MsG0280011045.01.T01 MTR_4g075410 25.424 236 134 1 23 258 26 219 1.63e-14 75.9
MsG0280011045.01.T01 MTR_4g074875 26.667 195 101 1 64 258 67 219 4.51e-14 74.3
MsG0280011045.01.T01 MTR_4g074875 26.667 195 101 1 64 258 67 219 4.53e-14 74.3
MsG0280011045.01.T01 MTR_1g052115 21.379 290 180 6 14 299 1 246 5.71e-14 73.9
MsG0280011045.01.T01 MTR_3g076970 25.194 258 149 8 23 275 32 250 1.46e-13 71.6
MsG0280011045.01.T01 MTR_4g005830 23.469 294 164 7 17 299 84 327 1.22e-12 68.9
MsG0280011045.01.T01 MTR_7g011800 23.889 360 190 12 12 336 115 425 1.47e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011045.01.T01 AT1G51170 56.709 395 145 8 7 378 13 404 4.23e-147 422
MsG0280011045.01.T01 AT3G20830 56.927 397 140 7 12 381 16 408 2.03e-146 421
MsG0280011045.01.T01 AT3G25250 47.429 350 158 5 9 338 9 352 2.38e-102 309
MsG0280011045.01.T01 AT4G13000 46.291 337 163 5 12 337 15 344 3.24e-98 297
MsG0280011045.01.T01 AT1G79250 37.958 382 189 8 12 347 141 520 1.32e-77 249
MsG0280011045.01.T01 AT1G79250 37.958 382 189 8 12 347 141 520 1.32e-77 249
MsG0280011045.01.T01 AT1G79250 37.958 382 189 8 12 347 141 520 1.32e-77 249
MsG0280011045.01.T01 AT1G79250 37.958 382 189 8 12 347 141 520 1.32e-77 249
MsG0280011045.01.T01 AT2G36350 40.437 366 170 8 12 333 554 915 3.72e-77 256
MsG0280011045.01.T01 AT5G47750 40.110 364 171 10 12 333 186 544 6.17e-77 248
MsG0280011045.01.T01 AT5G58140 41.493 335 163 7 8 331 568 880 7.16e-77 255
MsG0280011045.01.T01 AT5G58140 41.493 335 163 7 8 331 568 880 7.16e-77 255
MsG0280011045.01.T01 AT5G58140 41.493 335 163 7 8 331 568 880 7.16e-77 255
MsG0280011045.01.T01 AT5G58140 41.493 335 163 7 8 331 568 880 7.16e-77 255
MsG0280011045.01.T01 AT5G58140 41.493 335 163 7 8 331 568 880 7.16e-77 255
MsG0280011045.01.T01 AT5G55910 39.402 368 177 8 12 337 104 467 9.61e-77 246
MsG0280011045.01.T01 AT5G55910 39.402 368 177 8 12 337 104 467 9.61e-77 246
MsG0280011045.01.T01 AT5G58140 41.945 329 158 7 8 325 568 874 4.58e-76 253
MsG0280011045.01.T01 AT3G12690 39.773 352 177 8 12 333 180 526 1.27e-75 245
MsG0280011045.01.T01 AT3G12690 39.773 352 177 8 12 333 180 526 1.27e-75 245
MsG0280011045.01.T01 AT3G12690 39.773 352 177 8 12 333 180 526 1.27e-75 245
MsG0280011045.01.T01 AT5G40030 39.889 361 183 9 9 337 106 464 7.18e-75 241
MsG0280011045.01.T01 AT2G44830 40.720 361 171 9 12 333 358 714 1.29e-74 246
MsG0280011045.01.T01 AT2G44830 40.720 361 171 9 12 333 358 714 1.29e-74 246
MsG0280011045.01.T01 AT2G44830 40.720 361 171 9 12 333 358 714 1.29e-74 246
MsG0280011045.01.T01 AT4G26610 39.130 368 174 9 12 337 118 477 2.67e-74 239
MsG0280011045.01.T01 AT2G34650 38.968 349 185 9 10 334 68 412 4.67e-74 237
MsG0280011045.01.T01 AT1G16440 37.468 395 202 10 12 380 108 483 1.08e-73 238
MsG0280011045.01.T01 AT3G45780 42.683 328 168 5 8 330 654 966 4.35e-73 246
MsG0280011045.01.T01 AT3G45780 42.683 328 168 5 8 330 654 966 4.35e-73 246
MsG0280011045.01.T01 AT3G52890 39.529 382 174 11 12 347 533 903 1.22e-72 244
MsG0280011045.01.T01 AT3G52890 39.529 382 174 11 12 347 533 903 1.22e-72 244
MsG0280011045.01.T01 AT3G52890 39.529 382 174 11 12 347 533 903 1.22e-72 244
MsG0280011045.01.T01 AT3G52890 39.529 382 174 11 12 347 533 903 1.22e-72 244
MsG0280011045.01.T01 AT3G44610 38.218 348 167 7 23 323 75 421 1.21e-71 231
MsG0280011045.01.T01 AT5G03640 39.118 363 177 8 12 333 536 895 7.20e-71 239
MsG0280011045.01.T01 AT5G03640 39.118 363 177 8 12 333 536 895 7.20e-71 239
MsG0280011045.01.T01 AT3G27580 37.222 360 185 7 12 333 177 533 7.52e-70 229
MsG0280011045.01.T01 AT3G27580 37.222 360 185 7 12 333 177 533 7.52e-70 229
MsG0280011045.01.T01 AT1G53700 39.706 340 193 7 3 332 79 416 3.21e-68 223
MsG0280011045.01.T01 AT3G14370 37.971 345 179 8 8 330 79 410 2.96e-65 215
MsG0280011045.01.T01 AT3G08730 32.523 329 166 9 12 333 129 408 1.83e-49 173
MsG0280011045.01.T01 AT3G08730 32.523 329 166 9 12 333 129 408 1.83e-49 173
MsG0280011045.01.T01 AT3G08720 32.749 342 172 10 2 334 123 415 4.73e-49 172
MsG0280011045.01.T01 AT3G08720 32.749 342 172 10 2 334 123 415 4.73e-49 172
MsG0280011045.01.T01 AT3G08720 32.749 342 172 10 2 334 123 415 4.73e-49 172
MsG0280011045.01.T01 AT3G08720 32.749 342 172 10 2 334 123 415 4.73e-49 172
MsG0280011045.01.T01 AT3G17850 29.923 391 216 14 3 363 869 1231 5.85e-44 163
MsG0280011045.01.T01 AT1G45160 33.735 332 186 10 12 333 665 972 6.69e-44 163
MsG0280011045.01.T01 AT1G45160 33.134 335 184 10 12 333 665 972 6.77e-44 163
MsG0280011045.01.T01 AT1G48490 29.674 337 209 7 12 342 824 1138 1.83e-43 162
MsG0280011045.01.T01 AT1G48490 29.674 337 209 7 12 342 823 1137 1.98e-43 162
MsG0280011045.01.T01 AT1G48490 29.674 337 209 7 12 342 823 1137 1.98e-43 162
MsG0280011045.01.T01 AT1G48490 29.674 337 209 7 12 342 823 1137 1.98e-43 162
MsG0280011045.01.T01 AT5G62310 28.537 410 231 12 3 381 739 1117 3.12e-43 161
MsG0280011045.01.T01 AT2G19400 32.047 337 196 11 12 326 100 425 4.35e-42 154
MsG0280011045.01.T01 AT3G10540 30.721 319 178 7 21 333 49 330 2.29e-41 152
MsG0280011045.01.T01 AT5G04510 29.781 319 181 7 21 333 48 329 1.56e-38 142
MsG0280011045.01.T01 AT5G04510 29.781 319 181 7 21 333 48 329 3.80e-38 143
MsG0280011045.01.T01 AT1G30640 30.409 342 208 11 10 334 20 348 5.59e-38 142
MsG0280011045.01.T01 AT1G30640 30.409 342 208 11 10 334 113 441 1.79e-37 142
MsG0280011045.01.T01 AT1G30640 30.409 342 208 11 10 334 113 441 1.79e-37 142
MsG0280011045.01.T01 AT2G26700 46.203 158 82 2 12 166 82 239 3.07e-37 141
MsG0280011045.01.T01 AT2G26700 47.101 138 62 3 214 341 354 490 1.10e-31 125
MsG0280011045.01.T01 AT4G33080 28.869 336 207 8 12 326 89 413 3.26e-36 138
MsG0280011045.01.T01 AT4G33080 28.869 336 207 8 12 326 89 413 4.39e-36 138
MsG0280011045.01.T01 AT5G09890 28.693 352 217 12 12 345 97 432 7.28e-36 137
MsG0280011045.01.T01 AT5G09890 28.693 352 217 12 12 345 97 432 8.28e-36 137
MsG0280011045.01.T01 AT3G23310 29.288 379 220 15 12 366 115 469 5.92e-35 135
MsG0280011045.01.T01 AT4G14350 29.360 344 207 12 12 337 114 439 2.03e-33 131
MsG0280011045.01.T01 AT4G14350 29.360 344 207 12 12 337 114 439 2.08e-33 131
MsG0280011045.01.T01 AT4G14350 29.360 344 207 12 12 337 114 439 2.08e-33 131
MsG0280011045.01.T01 AT4G14350 29.360 344 207 12 12 337 114 439 2.08e-33 131
MsG0280011045.01.T01 AT2G45490 29.861 288 139 6 23 300 28 262 4.33e-32 122
MsG0280011045.01.T01 AT1G03920 27.586 377 226 15 12 366 19 370 2.38e-31 124
MsG0280011045.01.T01 AT5G04510 30.325 277 151 8 21 292 48 287 4.83e-31 120
MsG0280011045.01.T01 AT1G03920 27.586 377 226 15 12 366 132 483 7.40e-31 124
MsG0280011045.01.T01 AT1G03920 27.586 377 226 15 12 366 132 483 7.40e-31 124
MsG0280011045.01.T01 AT2G45490 27.273 286 153 5 2 285 7 239 1.56e-28 112
MsG0280011045.01.T01 AT2G20470 26.593 361 222 12 12 352 119 456 1.56e-28 117
MsG0280011045.01.T01 AT2G20470 26.593 361 222 12 12 352 119 456 1.84e-28 117
MsG0280011045.01.T01 AT2G20470 26.593 361 222 12 12 352 119 456 1.84e-28 117
MsG0280011045.01.T01 AT5G18700 27.829 327 176 9 14 337 1 270 5.36e-27 113
MsG0280011045.01.T01 AT2G25880 27.622 286 154 7 21 301 29 266 1.20e-26 108
MsG0280011045.01.T01 AT2G20050 29.796 245 123 4 116 355 877 1077 1.29e-26 112
MsG0280011045.01.T01 AT2G20050 29.796 245 123 4 116 355 880 1080 1.35e-26 112
MsG0280011045.01.T01 AT4G32830 28.070 285 152 7 21 300 35 271 1.56e-26 107
MsG0280011045.01.T01 AT2G25880 27.622 286 154 7 21 301 42 279 1.64e-26 108
MsG0280011045.01.T01 AT2G25880 27.622 286 154 7 21 301 90 327 6.89e-26 107
MsG0280011045.01.T01 AT4G18700 27.619 315 172 10 8 316 17 281 2.92e-24 104
MsG0280011045.01.T01 AT4G04720 27.129 317 151 12 21 317 84 340 1.24e-23 102
MsG0280011045.01.T01 AT4G04720 27.129 317 151 12 21 317 84 340 1.24e-23 102
MsG0280011045.01.T01 AT4G29810 27.301 326 175 9 3 316 65 340 5.39e-23 99.4
MsG0280011045.01.T01 AT4G29810 27.301 326 175 9 3 316 56 331 5.55e-23 99.4
MsG0280011045.01.T01 AT4G29810 27.184 309 167 8 3 299 65 327 1.60e-21 94.7
MsG0280011045.01.T01 AT1G29230 27.036 307 165 11 3 300 61 317 2.42e-21 95.9
MsG0280011045.01.T01 AT3G06030 26.332 319 163 10 21 321 72 336 2.88e-21 96.3
MsG0280011045.01.T01 AT5G25110 24.648 284 166 7 21 300 47 286 5.05e-21 94.7
MsG0280011045.01.T01 AT4G26070 25.460 326 179 8 4 316 42 316 7.72e-21 92.8
MsG0280011045.01.T01 AT1G69220 26.471 238 131 4 20 257 252 445 1.00e-20 94.7
MsG0280011045.01.T01 AT4G26070 25.460 326 179 8 4 316 54 328 1.13e-20 92.4
MsG0280011045.01.T01 AT4G26070 25.460 326 179 8 4 316 55 329 1.19e-20 92.4
MsG0280011045.01.T01 AT4G26070 25.460 326 179 8 4 316 55 329 1.19e-20 92.4
MsG0280011045.01.T01 AT1G12680 24.497 298 159 9 23 312 113 352 1.72e-20 93.2
MsG0280011045.01.T01 AT4G21940 26.198 313 159 11 21 317 106 362 3.34e-20 92.4
MsG0280011045.01.T01 AT4G21940 26.198 313 159 11 21 317 106 362 3.75e-20 92.4
MsG0280011045.01.T01 AT4G21940 26.198 313 159 11 21 317 106 362 4.33e-20 92.4
MsG0280011045.01.T01 AT2G34180 25.776 322 183 12 2 316 40 312 4.97e-20 92.0
MsG0280011045.01.T01 AT3G50530 27.517 298 175 11 23 300 154 430 5.28e-20 92.4
MsG0280011045.01.T01 AT1G69220 25.591 254 145 4 4 257 209 418 5.88e-20 92.4
MsG0280011045.01.T01 AT1G54960 25.896 251 136 5 21 264 72 279 6.25e-20 92.0
MsG0280011045.01.T01 AT1G54960 25.896 251 136 5 21 264 72 279 6.25e-20 92.0
MsG0280011045.01.T01 AT2G26980 25.532 329 176 12 21 340 18 286 8.32e-20 90.5
MsG0280011045.01.T01 AT5G45810 25.667 300 165 9 10 300 21 271 1.10e-19 90.9
MsG0280011045.01.T01 AT5G10930 23.860 285 168 7 21 300 16 256 1.22e-19 90.5
MsG0280011045.01.T01 AT2G26980 25.767 326 173 12 21 337 18 283 1.28e-19 90.5
MsG0280011045.01.T01 AT2G26980 25.532 329 176 12 21 340 28 296 1.37e-19 90.5
MsG0280011045.01.T01 AT2G26980 25.532 329 176 12 21 340 18 286 1.39e-19 90.5
MsG0280011045.01.T01 AT3G15220 25.723 311 163 10 20 319 18 271 1.55e-19 90.9
MsG0280011045.01.T01 AT1G09000 25.498 251 137 5 21 264 73 280 1.98e-19 90.5
MsG0280011045.01.T01 AT1G09000 25.100 251 138 4 21 264 73 280 2.31e-19 90.5
MsG0280011045.01.T01 AT2G30360 27.018 285 160 10 21 300 25 266 2.44e-19 89.7
MsG0280011045.01.T01 AT5G45820 25.597 293 152 10 21 300 16 255 3.47e-19 89.0
MsG0280011045.01.T01 AT4G23650 26.129 310 157 10 23 316 84 337 1.03e-18 88.2
MsG0280011045.01.T01 AT5G01810 25.352 284 164 9 21 300 16 255 1.18e-18 87.0
MsG0280011045.01.T01 AT4G26070 26.766 269 149 5 4 270 55 277 1.53e-18 85.9
MsG0280011045.01.T01 AT5G01810 25.000 284 165 8 21 300 16 255 1.85e-18 87.0
MsG0280011045.01.T01 AT5G01810 25.000 284 165 8 21 300 16 255 1.85e-18 87.0
MsG0280011045.01.T01 AT1G54510 22.857 280 170 4 20 296 7 243 2.47e-18 87.0
MsG0280011045.01.T01 AT1G54510 22.857 280 170 4 20 296 7 243 2.47e-18 87.0
MsG0280011045.01.T01 AT1G54510 22.857 280 170 4 20 296 7 243 2.47e-18 87.0
MsG0280011045.01.T01 AT1G54510 22.857 280 170 4 20 296 7 243 2.47e-18 87.0
MsG0280011045.01.T01 AT1G50240 22.623 305 184 6 20 322 9 263 3.18e-18 87.4
MsG0280011045.01.T01 AT1G50240 22.623 305 184 6 20 322 9 263 3.18e-18 87.4
MsG0280011045.01.T01 AT4G14580 25.080 311 177 9 1 300 1 266 5.55e-18 85.5
MsG0280011045.01.T01 AT3G04530 25.424 295 166 6 15 300 9 258 6.31e-18 83.6
MsG0280011045.01.T01 AT1G08650 26.557 305 167 8 8 300 3 262 6.36e-18 83.6
MsG0280011045.01.T01 AT1G08650 26.557 305 167 8 8 300 3 262 8.35e-18 83.2
MsG0280011045.01.T01 AT2G26980 25.874 286 155 10 21 297 18 255 1.10e-17 82.8
MsG0280011045.01.T01 AT2G17890 26.621 293 155 10 21 300 112 357 1.68e-17 84.7
MsG0280011045.01.T01 AT3G63280 23.000 300 173 6 20 312 7 255 2.32e-17 84.0
MsG0280011045.01.T01 AT3G63280 23.000 300 173 6 20 312 7 255 2.32e-17 84.0
MsG0280011045.01.T01 AT3G63280 23.000 300 173 6 20 312 7 255 2.32e-17 84.0
MsG0280011045.01.T01 AT1G53165 25.402 311 164 10 20 319 18 271 2.32e-17 84.3
MsG0280011045.01.T01 AT4G04740 26.471 272 129 10 61 317 114 329 2.60e-17 84.0
MsG0280011045.01.T01 AT4G04740 26.471 272 129 10 61 317 114 329 2.60e-17 84.0
MsG0280011045.01.T01 AT4G04740 26.471 272 129 10 61 317 114 329 2.60e-17 84.0
MsG0280011045.01.T01 AT4G04740 26.471 272 129 10 61 317 114 329 2.60e-17 84.0
MsG0280011045.01.T01 AT4G04740 26.471 272 129 10 61 317 114 329 2.60e-17 84.0
MsG0280011045.01.T01 AT4G04740 26.471 272 129 10 61 317 114 329 2.60e-17 84.0
MsG0280011045.01.T01 AT4G04740 26.471 272 129 10 61 317 114 329 2.67e-17 84.0
MsG0280011045.01.T01 AT1G53165 25.402 311 164 10 20 319 18 271 2.78e-17 84.0
MsG0280011045.01.T01 AT1G53165 25.402 311 164 10 20 319 18 271 2.85e-17 84.0
MsG0280011045.01.T01 AT3G63280 23.000 300 173 6 20 312 61 309 2.90e-17 84.0
MsG0280011045.01.T01 AT5G14720 25.591 254 136 5 12 258 11 218 5.09e-17 83.2
MsG0280011045.01.T01 AT5G14720 25.591 254 136 5 12 258 11 218 5.09e-17 83.2
MsG0280011045.01.T01 AT3G44200 23.102 303 177 6 20 316 11 263 5.92e-17 83.2
MsG0280011045.01.T01 AT3G44200 23.102 303 177 6 20 316 11 263 5.92e-17 83.2
MsG0280011045.01.T01 AT4G24400 24.590 305 165 11 21 315 13 262 8.30e-17 82.0
MsG0280011045.01.T01 AT4G24400 24.194 310 160 11 21 315 13 262 1.05e-16 81.6
MsG0280011045.01.T01 AT2G38490 25.410 244 137 6 21 262 32 232 1.14e-16 81.6
MsG0280011045.01.T01 AT3G04810 24.498 249 142 5 14 260 1 205 1.20e-16 82.0
MsG0280011045.01.T01 AT3G04810 24.498 249 142 5 14 260 1 205 1.20e-16 82.0
MsG0280011045.01.T01 AT3G04810 24.498 249 142 5 14 260 1 205 1.20e-16 82.0
MsG0280011045.01.T01 AT1G63700 26.032 315 157 11 21 318 404 659 2.04e-16 81.6
MsG0280011045.01.T01 AT1G63700 26.032 315 157 11 21 318 404 659 2.04e-16 81.6
MsG0280011045.01.T01 AT1G53570 25.065 387 204 14 5 371 206 526 2.10e-16 81.3
MsG0280011045.01.T01 AT1G53570 25.065 387 204 14 5 371 206 526 2.10e-16 81.3
MsG0280011045.01.T01 AT1G53570 25.000 388 204 14 5 371 206 527 2.69e-16 80.9
MsG0280011045.01.T01 AT5G28290 23.554 242 141 3 20 260 7 205 2.80e-16 80.9
MsG0280011045.01.T01 AT5G28290 23.554 242 141 3 20 260 7 205 3.28e-16 80.5
MsG0280011045.01.T01 AT5G28290 23.554 242 141 3 20 260 7 205 3.28e-16 80.5
MsG0280011045.01.T01 AT1G18350 22.101 276 160 7 3 271 30 257 4.93e-16 78.6
MsG0280011045.01.T01 AT1G53570 24.740 384 203 14 5 368 206 523 1.72e-15 78.2
MsG0280011045.01.T01 AT1G53570 24.675 385 203 14 5 368 206 524 2.13e-15 78.2
MsG0280011045.01.T01 AT1G53570 24.675 385 203 14 5 368 206 524 2.50e-15 77.8
MsG0280011045.01.T01 AT3G23000 24.561 285 162 10 23 300 31 269 3.47e-15 77.0
MsG0280011045.01.T01 AT3G20860 20.430 279 177 2 23 299 10 245 4.42e-15 76.6
MsG0280011045.01.T01 AT5G07070 23.320 253 147 7 21 270 16 224 6.69e-15 76.3
MsG0280011045.01.T01 AT1G73500 22.741 321 183 8 9 316 39 307 1.04e-14 74.7
MsG0280011045.01.T01 AT4G30960 24.686 239 135 5 64 300 72 267 1.52e-14 75.1
MsG0280011045.01.T01 AT3G13530 25.424 236 134 1 23 258 26 219 2.86e-14 75.1
MsG0280011045.01.T01 AT3G07980 25.000 236 135 1 23 258 26 219 3.46e-14 75.1
MsG0280011045.01.T01 AT3G07980 25.000 236 135 1 23 258 26 219 4.12e-14 74.7
MsG0280011045.01.T01 AT1G32320 25.237 317 167 11 13 316 44 303 1.28e-13 71.2
MsG0280011045.01.T01 AT5G50180 24.296 284 169 9 23 299 26 270 6.89e-13 69.7
MsG0280011045.01.T01 AT1G51660 22.772 303 171 7 23 315 85 334 1.10e-12 68.9
MsG0280011045.01.T01 AT2G25880 33.333 99 63 1 206 301 136 234 3.21e-12 66.6
MsG0280011045.01.T01 AT3G27560 24.912 285 166 10 23 299 32 276 4.11e-11 64.3
MsG0280011045.01.T01 AT5G58140 30.435 115 77 2 8 120 568 681 6.39e-11 64.3

Find 97 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATGGGAAAACACCGTTTA+AGG 0.214990 2:-78830610 MsG0280011045.01.T01:CDS
TTTGAAACGGCTCAGTTAAT+TGG 0.230681 2:-78831119 MsG0280011045.01.T01:CDS
CCGTCGCCGCGGATTACTTC+CGG 0.327605 2:+78830687 None:intergenic
GTTTGAGGTTGTTGAGGTTA+AGG 0.334202 2:+78831333 None:intergenic
CTCCCAACGGGCTCGACGTT+CGG 0.347912 2:+78831196 None:intergenic
AACGTTCTTATTCAACAATC+TGG 0.349756 2:-78830930 MsG0280011045.01.T01:CDS
CGTCGCCGCGGATTACTTCC+GGG 0.352639 2:+78830688 None:intergenic
AGATCACCTCCTGAGCAATA+TGG 0.363728 2:+78831086 None:intergenic
TTCAAGAAGCTTGAATTTGT+TGG 0.364298 2:-78830552 MsG0280011045.01.T01:CDS
TGGAGGAGCTAATGAAATTA+AGG 0.369595 2:-78830457 MsG0280011045.01.T01:CDS
AGGTTAAGGTCTTGTGTACT+AGG 0.388335 2:+78831347 None:intergenic
TTCTTATTCTTCCCCTTAAA+CGG 0.388670 2:+78830597 None:intergenic
TATTTGACGGCGGAGGAATT+CGG 0.390287 2:-78830351 MsG0280011045.01.T01:CDS
TATGGGAAAACACCGTTTAA+GGG 0.398885 2:-78830609 MsG0280011045.01.T01:CDS
CGCCGAACGTCGAGCCCGTT+GGG 0.404219 2:-78831198 MsG0280011045.01.T01:CDS
TCCATTCCTCCCATCCATCC+TGG 0.408154 2:-78831147 MsG0280011045.01.T01:CDS
TGCCGTCGTCGTCGCCGTTA+CGG 0.416328 2:-78830290 MsG0280011045.01.T01:CDS
TGGAAGGAAAACACCGTTAA+CGG 0.421316 2:-78830532 MsG0280011045.01.T01:CDS
CTCAAACCACTCAAAATATT+AGG 0.425265 2:-78831317 MsG0280011045.01.T01:CDS
AAGGATCCATTGAAGAGATT+AGG 0.425634 2:-78830486 MsG0280011045.01.T01:CDS
CGTTCGATCAAATCCGTTAA+CGG 0.430561 2:+78830519 None:intergenic
TTAAGCTACGAGATGTTGTA+TGG 0.433577 2:-78830627 MsG0280011045.01.T01:CDS
TCATCTCTCGACGGAATAAA+CGG 0.437394 2:+78830378 None:intergenic
GTCACCGTCGTCTGAGTTTG+AGG 0.438899 2:-78830268 MsG0280011045.01.T01:CDS
GAAAAGTCTAACTCGTTTGT+TGG 0.462299 2:-78830729 MsG0280011045.01.T01:CDS
ACGTAAACTTTCACACAAAA+CGG 0.466415 2:-78830877 MsG0280011045.01.T01:CDS
AAACGGCTCAGTTAATTGGC+TGG 0.467130 2:-78831115 MsG0280011045.01.T01:CDS
TCAAAGTTGCCCAGGATGGA+TGG 0.472882 2:+78831137 None:intergenic
AGAAGACACGGTCCGTTTGT+TGG 0.477023 2:+78831048 None:intergenic
CTCAATCCACGACGACTCAC+CGG 0.481389 2:+78830765 None:intergenic
ATATTAGGCAAAGGAGCAAT+GGG 0.488514 2:-78831302 MsG0280011045.01.T01:CDS
CCCAGGATGGATGGGAGGAA+TGG 0.499957 2:+78831146 None:intergenic
ACGTAACCTAATCTCTTCAA+TGG 0.502638 2:+78830480 None:intergenic
GGTAAAATGGGAAATGTTGA+CGG 0.504814 2:-78830415 MsG0280011045.01.T01:CDS
AATATTAGGCAAAGGAGCAA+TGG 0.515425 2:-78831303 MsG0280011045.01.T01:CDS
GAATCTCTGCTATGTAGAAA+CGG 0.516064 2:+78831012 None:intergenic
AACGGCTCAGTTAATTGGCT+GGG 0.516902 2:-78831114 MsG0280011045.01.T01:CDS
CAAAGTTGCCCAGGATGGAT+GGG 0.520980 2:+78831138 None:intergenic
TGCGCTCCGTTACCAACAAA+CGG 0.524239 2:-78831060 MsG0280011045.01.T01:CDS
AAATGTTGACGGAGGTTGTA+CGG 0.525214 2:-78830404 MsG0280011045.01.T01:CDS
AAGAGATTAGGTTACGTTGG+AGG 0.527362 2:-78830474 MsG0280011045.01.T01:CDS
TAAGACGTCGATCTCCCAAC+GGG 0.538002 2:+78831184 None:intergenic
GAGGAATGGATGTGATAAAG+TGG 0.538669 2:+78831160 None:intergenic
GAGCCGTTTCAAAGTTGCCC+AGG 0.539709 2:+78831129 None:intergenic
CATCCTGGGCAACTTTGAAA+CGG 0.540547 2:-78831132 MsG0280011045.01.T01:CDS
CACAGCAGAGTACGTCGCCC+CGG 0.544316 2:-78830706 MsG0280011045.01.T01:CDS
GATCGAACGGTTGTTAGAGA+AGG 0.544362 2:-78830505 MsG0280011045.01.T01:CDS
CACGGTCCGTTTGTTGGTAA+CGG 0.546711 2:+78831054 None:intergenic
GGACTAATTCGACGATTGAG+TGG 0.549952 2:+78830786 None:intergenic
CCATTCCTCCCATCCATCCT+GGG 0.550555 2:-78831146 MsG0280011045.01.T01:CDS
TGGGCCGTTCCATATTGCTC+AGG 0.553646 2:-78831095 MsG0280011045.01.T01:CDS
AGAAGCTTGAATTTGTTGGA+AGG 0.553916 2:-78830548 MsG0280011045.01.T01:CDS
TTGAAGAGATTAGGTTACGT+TGG 0.554323 2:-78830477 MsG0280011045.01.T01:CDS
GTCAACTACTTTGAGTGCCA+TGG 0.555726 2:+78831238 None:intergenic
ACGTTCGGCGTCGTGTGTGG+AGG 0.558783 2:+78831211 None:intergenic
GTGGATTCTGCTATCTTCGA+CGG 0.561764 2:+78830842 None:intergenic
GAGAGATGACGGTTATTTGA+CGG 0.561885 2:-78830364 MsG0280011045.01.T01:CDS
TTTATTCCGTCGAGAGATGA+CGG 0.563993 2:-78830375 MsG0280011045.01.T01:CDS
CGTTTCAAAGTTGCCCAGGA+TGG 0.564263 2:+78831133 None:intergenic
ACTCAATCGTCGAATTAGTC+CGG 0.566855 2:-78830784 MsG0280011045.01.T01:CDS
TCGACGTTCGGCGTCGTGTG+TGG 0.568999 2:+78831208 None:intergenic
GGCGGAGGAATTCGGTGGAG+TGG 0.569972 2:-78830343 MsG0280011045.01.T01:CDS
ATTAGTCCGGTGAGTCGTCG+TGG 0.574660 2:-78830771 MsG0280011045.01.T01:CDS
ACGCCGAACGTCGAGCCCGT+TGG 0.575774 2:-78831199 MsG0280011045.01.T01:CDS
TGAGTGGTTTGAGGTTGTTG+AGG 0.578898 2:+78831327 None:intergenic
TGACGGTTATTTGACGGCGG+AGG 0.580618 2:-78830358 MsG0280011045.01.T01:CDS
TAAGCTACGAGATGTTGTAT+GGG 0.582681 2:-78830626 MsG0280011045.01.T01:CDS
CCGGAAGTAATCCGCGGCGA+CGG 0.589107 2:-78830687 MsG0280011045.01.T01:CDS
GTCGCCGCGGATTACTTCCG+GGG 0.591913 2:+78830689 None:intergenic
CCACTCAAAATATTAGGCAA+AGG 0.592566 2:-78831311 MsG0280011045.01.T01:CDS
ATGGGAAAACACCGTTTAAG+GGG 0.596069 2:-78830608 MsG0280011045.01.T01:CDS
CTTGAACATCTTCATACCAT+GGG 0.597222 2:-78830981 MsG0280011045.01.T01:CDS
GACCGTAACGGCGACGACGA+CGG 0.597227 2:+78830288 None:intergenic
TCTTGAACATCTTCATACCA+TGG 0.599326 2:-78830982 MsG0280011045.01.T01:CDS
GCCGTTCCATATTGCTCAGG+AGG 0.603060 2:-78831092 MsG0280011045.01.T01:CDS
TTGACGGCGGAGGAATTCGG+TGG 0.604647 2:-78830348 MsG0280011045.01.T01:CDS
CGTTAACGGATTTGATCGAA+CGG 0.605793 2:-78830518 MsG0280011045.01.T01:CDS
CGAAATCAGTTAACGTGACG+TGG 0.610579 2:+78830907 None:intergenic
ACCTCCTGAGCAATATGGAA+CGG 0.615838 2:+78831091 None:intergenic
ACGAATCTCAACGTAAAACT+CGG 0.616793 2:-78830821 MsG0280011045.01.T01:CDS
TCTTGTGTACTAGGTGATGT+TGG 0.617524 2:+78831356 None:intergenic
CTCAACGTAAAACTCGGCGA+TGG 0.629173 2:-78830815 MsG0280011045.01.T01:CDS
CGAATTCATGTCCGTCGCCG+CGG 0.635238 2:+78830676 None:intergenic
TCAGACGACGGTGACCGTAA+CGG 0.637892 2:+78830276 None:intergenic
TTGCTGTTGTTGAGAAGACA+CGG 0.638083 2:+78831036 None:intergenic
CTATCCTCAAACTCAGACGA+CGG 0.647272 2:+78830264 None:intergenic
ATAAGACGTCGATCTCCCAA+CGG 0.650869 2:+78831183 None:intergenic
AGTTGCCCAGGATGGATGGG+AGG 0.654044 2:+78831141 None:intergenic
GTCGCCCCGGAAGTAATCCG+CGG 0.664172 2:-78830693 MsG0280011045.01.T01:CDS
GTCGCGATAAGCTATGCCCA+TGG 0.669008 2:+78830965 None:intergenic
CGTGGATTGAGTTTCTCCGA+CGG 0.669810 2:-78830753 MsG0280011045.01.T01:CDS
AAATAACCGTCATCTCTCGA+CGG 0.670876 2:+78830369 None:intergenic
AACTACTTTGAGTGCCATGG+TGG 0.680601 2:+78831241 None:intergenic
AAAATGGGAAATGTTGACGG+AGG 0.693491 2:-78830412 MsG0280011045.01.T01:CDS
CAACAACGTTAACACCACCA+TGG 0.694696 2:-78831255 MsG0280011045.01.T01:CDS
AGATGACGGTTATTTGACGG+CGG 0.716338 2:-78830361 MsG0280011045.01.T01:CDS
TCTCTCGACGGAATAAACGG+TGG 0.757144 2:+78830381 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AACGTTCTTATTCAACAATC+TGG - Chr2:78830677-78830696 MsG0280011045.01.T01:CDS 30.0%
ACGTAAACTTTCACACAAAA+CGG - Chr2:78830730-78830749 MsG0280011045.01.T01:CDS 30.0%
CTCAAACCACTCAAAATATT+AGG - Chr2:78830290-78830309 MsG0280011045.01.T01:CDS 30.0%
TTCAAGAAGCTTGAATTTGT+TGG - Chr2:78831055-78831074 MsG0280011045.01.T01:CDS 30.0%
TTCTTATTCTTCCCCTTAAA+CGG + Chr2:78831013-78831032 None:intergenic 30.0%
! TGTTGAATAAGAACGTTTTC+TGG + Chr2:78830674-78830693 None:intergenic 30.0%
!! ATGAATTCGCAGTTGATTTT+TGG - Chr2:78830945-78830964 MsG0280011045.01.T01:CDS 30.0%
!! CTAATATTTTGAGTGGTTTG+AGG + Chr2:78830292-78830311 None:intergenic 30.0%
!! TGAATTCGCAGTTGATTTTT+GGG - Chr2:78830946-78830965 MsG0280011045.01.T01:CDS 30.0%
!!! AGTTTTTTAGAGGGGTAAAA+TGG - Chr2:78831179-78831198 MsG0280011045.01.T01:CDS 30.0%
!!! GTTTTTTAGAGGGGTAAAAT+GGG - Chr2:78831180-78831199 MsG0280011045.01.T01:CDS 30.0%
!!! TAAGAACGTTTTCTGGTTTA+AGG + Chr2:78830667-78830686 None:intergenic 30.0%
!!! TGTTAACGTTGTTGTTTTGT+TGG + Chr2:78830346-78830365 None:intergenic 30.0%
AAGGATCCATTGAAGAGATT+AGG - Chr2:78831121-78831140 MsG0280011045.01.T01:CDS 35.0%
AATATTAGGCAAAGGAGCAA+TGG - Chr2:78830304-78830323 MsG0280011045.01.T01:CDS 35.0%
ACGAATCTCAACGTAAAACT+CGG - Chr2:78830786-78830805 MsG0280011045.01.T01:CDS 35.0%
ACGTAACCTAATCTCTTCAA+TGG + Chr2:78831130-78831149 None:intergenic 35.0%
ATATTAGGCAAAGGAGCAAT+GGG - Chr2:78830305-78830324 MsG0280011045.01.T01:CDS 35.0%
CCACTCAAAATATTAGGCAA+AGG - Chr2:78830296-78830315 MsG0280011045.01.T01:CDS 35.0%
CTTGAACATCTTCATACCAT+GGG - Chr2:78830626-78830645 MsG0280011045.01.T01:CDS 35.0%
GAAAAGTCTAACTCGTTTGT+TGG - Chr2:78830878-78830897 MsG0280011045.01.T01:CDS 35.0%
GAATCTCTGCTATGTAGAAA+CGG + Chr2:78830598-78830617 None:intergenic 35.0%
GGTAAAATGGGAAATGTTGA+CGG - Chr2:78831192-78831211 MsG0280011045.01.T01:CDS 35.0%
TAAGCTACGAGATGTTGTAT+GGG - Chr2:78830981-78831000 MsG0280011045.01.T01:CDS 35.0%
TATGGGAAAACACCGTTTAA+GGG - Chr2:78830998-78831017 MsG0280011045.01.T01:CDS 35.0%
TCTTGAACATCTTCATACCA+TGG - Chr2:78830625-78830644 MsG0280011045.01.T01:CDS 35.0%
TGGAGGAGCTAATGAAATTA+AGG - Chr2:78831150-78831169 MsG0280011045.01.T01:CDS 35.0%
TTAAGCTACGAGATGTTGTA+TGG - Chr2:78830980-78830999 MsG0280011045.01.T01:CDS 35.0%
TTGAAGAGATTAGGTTACGT+TGG - Chr2:78831130-78831149 MsG0280011045.01.T01:CDS 35.0%
! TTTGAAACGGCTCAGTTAAT+TGG - Chr2:78830488-78830507 MsG0280011045.01.T01:CDS 35.0%
!! AGAAGCTTGAATTTGTTGGA+AGG - Chr2:78831059-78831078 MsG0280011045.01.T01:CDS 35.0%
!! CCTTTGCCTAATATTTTGAG+TGG + Chr2:78830299-78830318 None:intergenic 35.0%
!! GTTTTGTTGGATGAGGAAAA+CGG + Chr2:78830333-78830352 None:intergenic 35.0%
!!! AAGGAGCATGAGTTTTTTAG+AGG - Chr2:78831169-78831188 MsG0280011045.01.T01:CDS 35.0%
!!! AGGAGCATGAGTTTTTTAGA+GGG - Chr2:78831170-78831189 MsG0280011045.01.T01:CDS 35.0%
AAAATGGGAAATGTTGACGG+AGG - Chr2:78831195-78831214 MsG0280011045.01.T01:CDS 40.0%
AAATAACCGTCATCTCTCGA+CGG + Chr2:78831241-78831260 None:intergenic 40.0%
AAATGTTGACGGAGGTTGTA+CGG - Chr2:78831203-78831222 MsG0280011045.01.T01:CDS 40.0%
AAGAGATTAGGTTACGTTGG+AGG - Chr2:78831133-78831152 MsG0280011045.01.T01:CDS 40.0%
ACTCAATCGTCGAATTAGTC+CGG - Chr2:78830823-78830842 MsG0280011045.01.T01:CDS 40.0%
ATGGGAAAACACCGTTTAAG+GGG - Chr2:78830999-78831018 MsG0280011045.01.T01:CDS 40.0%
CGTTCGATCAAATCCGTTAA+CGG + Chr2:78831091-78831110 None:intergenic 40.0%
GAGGAATGGATGTGATAAAG+TGG + Chr2:78830450-78830469 None:intergenic 40.0%
GTATGGGAAAACACCGTTTA+AGG - Chr2:78830997-78831016 MsG0280011045.01.T01:CDS 40.0%
TCATCTCTCGACGGAATAAA+CGG + Chr2:78831232-78831251 None:intergenic 40.0%
TCTTGTGTACTAGGTGATGT+TGG + Chr2:78830254-78830273 None:intergenic 40.0%
TGGAAGGAAAACACCGTTAA+CGG - Chr2:78831075-78831094 MsG0280011045.01.T01:CDS 40.0%
TTTATTCCGTCGAGAGATGA+CGG - Chr2:78831232-78831251 MsG0280011045.01.T01:CDS 40.0%
! AGGTTAAGGTCTTGTGTACT+AGG + Chr2:78830263-78830282 None:intergenic 40.0%
! GAGAGATGACGGTTATTTGA+CGG - Chr2:78831243-78831262 MsG0280011045.01.T01:CDS 40.0%
! GAGTTTTACGTTGAGATTCG+TGG + Chr2:78830787-78830806 None:intergenic 40.0%
! GTTTGAGGTTGTTGAGGTTA+AGG + Chr2:78830277-78830296 None:intergenic 40.0%
! TTGCTGTTGTTGAGAAGACA+CGG + Chr2:78830574-78830593 None:intergenic 40.0%
!! CGTTAACGGATTTGATCGAA+CGG - Chr2:78831089-78831108 MsG0280011045.01.T01:CDS 40.0%
!!! CGTTGTTGTTTTGTTGGATG+AGG + Chr2:78830340-78830359 None:intergenic 40.0%
!!! GGAGCATGAGTTTTTTAGAG+GGG - Chr2:78831171-78831190 MsG0280011045.01.T01:CDS 40.0%
AAACGGCTCAGTTAATTGGC+TGG - Chr2:78830492-78830511 MsG0280011045.01.T01:CDS 45.0%
AACGGCTCAGTTAATTGGCT+GGG - Chr2:78830493-78830512 MsG0280011045.01.T01:CDS 45.0%
AACTACTTTGAGTGCCATGG+TGG + Chr2:78830369-78830388 None:intergenic 45.0%
ACCTCCTGAGCAATATGGAA+CGG + Chr2:78830519-78830538 None:intergenic 45.0%
AGATCACCTCCTGAGCAATA+TGG + Chr2:78830524-78830543 None:intergenic 45.0%
ATAAGACGTCGATCTCCCAA+CGG + Chr2:78830427-78830446 None:intergenic 45.0%
CAACAACGTTAACACCACCA+TGG - Chr2:78830352-78830371 MsG0280011045.01.T01:CDS 45.0%
CGAAATCAGTTAACGTGACG+TGG + Chr2:78830703-78830722 None:intergenic 45.0%
CTATCCTCAAACTCAGACGA+CGG + Chr2:78831346-78831365 None:intergenic 45.0%
GATCGAACGGTTGTTAGAGA+AGG - Chr2:78831102-78831121 MsG0280011045.01.T01:CDS 45.0%
GGACTAATTCGACGATTGAG+TGG + Chr2:78830824-78830843 None:intergenic 45.0%
GTCAACTACTTTGAGTGCCA+TGG + Chr2:78830372-78830391 None:intergenic 45.0%
GTGGATTCTGCTATCTTCGA+CGG + Chr2:78830768-78830787 None:intergenic 45.0%
TATTTGACGGCGGAGGAATT+CGG - Chr2:78831256-78831275 MsG0280011045.01.T01:CDS 45.0%
! AGATGACGGTTATTTGACGG+CGG - Chr2:78831246-78831265 MsG0280011045.01.T01:CDS 45.0%
! CATCCTGGGCAACTTTGAAA+CGG - Chr2:78830475-78830494 MsG0280011045.01.T01:CDS 45.0%
! CGAGTTAGACTTTTCACCGT+CGG + Chr2:78830873-78830892 None:intergenic 45.0%
! TGAGTGGTTTGAGGTTGTTG+AGG + Chr2:78830283-78830302 None:intergenic 45.0%
!! GCAGTTGATTTTTGGGCTCT+TGG - Chr2:78830953-78830972 MsG0280011045.01.T01:CDS 45.0%
AGAAGACACGGTCCGTTTGT+TGG + Chr2:78830562-78830581 None:intergenic 50.0%
CAAAGTTGCCCAGGATGGAT+GGG + Chr2:78830472-78830491 None:intergenic 50.0%
CGTTTCAAAGTTGCCCAGGA+TGG + Chr2:78830477-78830496 None:intergenic 50.0%
CTCAACGTAAAACTCGGCGA+TGG - Chr2:78830792-78830811 MsG0280011045.01.T01:CDS 50.0%
TAAGACGTCGATCTCCCAAC+GGG + Chr2:78830426-78830445 None:intergenic 50.0%
TCAAAGTTGCCCAGGATGGA+TGG + Chr2:78830473-78830492 None:intergenic 50.0%
TCTCTCGACGGAATAAACGG+TGG + Chr2:78831229-78831248 None:intergenic 50.0%
TGCGCTCCGTTACCAACAAA+CGG - Chr2:78830547-78830566 MsG0280011045.01.T01:CDS 50.0%
! CACGGTCCGTTTGTTGGTAA+CGG + Chr2:78830556-78830575 None:intergenic 50.0%
! CGTGGATTGAGTTTCTCCGA+CGG - Chr2:78830854-78830873 MsG0280011045.01.T01:CDS 50.0%
ATTAGTCCGGTGAGTCGTCG+TGG - Chr2:78830836-78830855 MsG0280011045.01.T01:CDS 55.0%
CCATTCCTCCCATCCATCCT+GGG - Chr2:78830461-78830480 MsG0280011045.01.T01:CDS 55.0%
CTCAATCCACGACGACTCAC+CGG + Chr2:78830845-78830864 None:intergenic 55.0%
GAGCCGTTTCAAAGTTGCCC+AGG + Chr2:78830481-78830500 None:intergenic 55.0%
GCCGTTCCATATTGCTCAGG+AGG - Chr2:78830515-78830534 MsG0280011045.01.T01:CDS 55.0%
GTCACCGTCGTCTGAGTTTG+AGG - Chr2:78831339-78831358 MsG0280011045.01.T01:CDS 55.0%
GTCGCGATAAGCTATGCCCA+TGG + Chr2:78830645-78830664 None:intergenic 55.0%
TCAGACGACGGTGACCGTAA+CGG + Chr2:78831334-78831353 None:intergenic 55.0%
TCCATTCCTCCCATCCATCC+TGG - Chr2:78830460-78830479 MsG0280011045.01.T01:CDS 55.0%
TGACGGTTATTTGACGGCGG+AGG - Chr2:78831249-78831268 MsG0280011045.01.T01:CDS 55.0%
TGGGCCGTTCCATATTGCTC+AGG - Chr2:78830512-78830531 MsG0280011045.01.T01:CDS 55.0%
AGTTGCCCAGGATGGATGGG+AGG + Chr2:78830469-78830488 None:intergenic 60.0%
CCCAGGATGGATGGGAGGAA+TGG + Chr2:78830464-78830483 None:intergenic 60.0%
CGAATTCATGTCCGTCGCCG+CGG + Chr2:78830934-78830953 None:intergenic 60.0%
TTGACGGCGGAGGAATTCGG+TGG - Chr2:78831259-78831278 MsG0280011045.01.T01:CDS 60.0%
ACGTTCGGCGTCGTGTGTGG+AGG + Chr2:78830399-78830418 None:intergenic 65.0%
CACAGCAGAGTACGTCGCCC+CGG - Chr2:78830901-78830920 MsG0280011045.01.T01:CDS 65.0%
CCGGAAGTAATCCGCGGCGA+CGG - Chr2:78830920-78830939 MsG0280011045.01.T01:CDS 65.0%
GACCGTAACGGCGACGACGA+CGG + Chr2:78831322-78831341 None:intergenic 65.0%
GTCGCCCCGGAAGTAATCCG+CGG - Chr2:78830914-78830933 MsG0280011045.01.T01:CDS 65.0%
TCGACGTTCGGCGTCGTGTG+TGG + Chr2:78830402-78830421 None:intergenic 65.0%
TGCCGTCGTCGTCGCCGTTA+CGG - Chr2:78831317-78831336 MsG0280011045.01.T01:CDS 65.0%
! CCGTCGCCGCGGATTACTTC+CGG + Chr2:78830923-78830942 None:intergenic 65.0%
! CGTCGCCGCGGATTACTTCC+GGG + Chr2:78830922-78830941 None:intergenic 65.0%
! CTCCCAACGGGCTCGACGTT+CGG + Chr2:78830414-78830433 None:intergenic 65.0%
! GGCGGAGGAATTCGGTGGAG+TGG - Chr2:78831264-78831283 MsG0280011045.01.T01:CDS 65.0%
! GTCGCCGCGGATTACTTCCG+GGG + Chr2:78830921-78830940 None:intergenic 65.0%
ACGCCGAACGTCGAGCCCGT+TGG - Chr2:78830408-78830427 MsG0280011045.01.T01:CDS 70.0%
CGCCGAACGTCGAGCCCGTT+GGG - Chr2:78830409-78830428 MsG0280011045.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 78830242 78831387 78830242 ID=MsG0280011045.01;Name=MsG0280011045.01
Chr2 mRNA 78830242 78831387 78830242 ID=MsG0280011045.01.T01;Parent=MsG0280011045.01;Name=MsG0280011045.01.T01;_AED=0.18;_eAED=0.18;_QI=0|-1|0|1|-1|1|1|0|381
Chr2 exon 78830242 78831387 78830242 ID=MsG0280011045.01.T01:exon:17346;Parent=MsG0280011045.01.T01
Chr2 CDS 78830242 78831387 78830242 ID=MsG0280011045.01.T01:cds;Parent=MsG0280011045.01.T01
Gene Sequence

>MsG0280011045.01.T01

ATGGATTCACCAACATCACCTAGTACACAAGACCTTAACCTCAACAACCTCAAACCACTCAAAATATTAGGCAAAGGAGCAATGGGAACCGTTTTCCTCATCCAACAAAACAACAACGTTAACACCACCATGGCACTCAAAGTAGTTGACAAATCCTCCACACACGACGCCGAACGTCGAGCCCGTTGGGAGATCGACGTCTTATCCACTTTATCACATCCATTCCTCCCATCCATCCTGGGCAACTTTGAAACGGCTCAGTTAATTGGCTGGGCCGTTCCATATTGCTCAGGAGGTGATCTGAATGCGCTCCGTTACCAACAAACGGACCGTGTCTTCTCAACAACAGCAATCCGTTTCTACATAGCAGAGATTCTCTGCGCTCTTGAACATCTTCATACCATGGGCATAGCTTATCGCGACCTTAAACCAGAAAACGTTCTTATTCAACAATCTGGCCACGTCACGTTAACTGATTTCGATCTCTCACGTAAACTTTCACACAAAACGGTTAGAACTTTAACCGTCGAAGATAGCAGAATCCACGAATCTCAACGTAAAACTCGGCGATGGAGAATTCCACTCAATCGTCGAATTAGTCCGGTGAGTCGTCGTGGATTGAGTTTCTCCGACGGTGAAAAGTCTAACTCGTTTGTTGGCACAGCAGAGTACGTCGCCCCGGAAGTAATCCGCGGCGACGGACATGAATTCGCAGTTGATTTTTGGGCTCTTGGAATTTTAAGCTACGAGATGTTGTATGGGAAAACACCGTTTAAGGGGAAGAATAAGAAAGAAACTTTTTCAAACGTGCTTTTCAAGAAGCTTGAATTTGTTGGAAGGAAAACACCGTTAACGGATTTGATCGAACGGTTGTTAGAGAAGGATCCATTGAAGAGATTAGGTTACGTTGGAGGAGCTAATGAAATTAAGGAGCATGAGTTTTTTAGAGGGGTAAAATGGGAAATGTTGACGGAGGTTGTACGGCCACCGTTTATTCCGTCGAGAGATGACGGTTATTTGACGGCGGAGGAATTCGGTGGAGTGGATATAAGTGATTATTTCGATAAGCTGAAATTGCCGTCGTCGTCGCCGTTACGGTCACCGTCGTCTGAGTTTGAGGATAGCGTTTCATTTGATGAGTTCTGA
Protein sequence

>MsG0280011045.01.T01

MDSPTSPSTQDLNLNNLKPLKILGKGAMGTVFLIQQNNNVNTTMALKVVDKSSTHDAERRARWEIDVLSTLSHPFLPSILGNFETAQLIGWAVPYCSGGDLNALRYQQTDRVFSTTAIRFYIAEILCALEHLHTMGIAYRDLKPENVLIQQSGHVTLTDFDLSRKLSHKTVRTLTVEDSRIHESQRKTRRWRIPLNRRISPVSRRGLSFSDGEKSNSFVGTAEYVAPEVIRGDGHEFAVDFWALGILSYEMLYGKTPFKGKNKKETFSNVLFKKLEFVGRKTPLTDLIERLLEKDPLKRLGYVGGANEIKEHEFFRGVKWEMLTEVVRPPFIPSRDDGYLTAEEFGGVDISDYFDKLKLPSSSPLRSPSSEFEDSVSFDEF*