AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011266.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011266.01.T01 MTR_2g101040 85.795 711 40 4 1 686 1 675 0.0 1194
MsG0280011266.01.T01 MTR_2g101040 89.157 664 11 3 76 686 14 669 0.0 1191
MsG0280011266.01.T01 MTR_2g101040 92.687 629 13 2 76 679 14 634 0.0 1184
MsG0280011266.01.T01 MTR_2g101040 92.763 608 11 2 76 658 14 613 0.0 1145
MsG0280011266.01.T01 MTR_8g014390 81.122 588 78 2 124 686 9 588 0.0 968
MsG0280011266.01.T01 MTR_3g110330 77.604 576 96 2 136 686 11 578 0.0 909
MsG0280011266.01.T01 MTR_8g102620 74.124 599 122 2 113 686 1 591 0.0 900
MsG0280011266.01.T01 MTR_8g009500 40.493 568 273 9 151 660 28 588 1.73e-138 420
MsG0280011266.01.T01 MTR_8g032040 39.304 575 283 10 164 682 33 597 5.56e-134 407
MsG0280011266.01.T01 MTR_7g076650 39.304 575 283 9 164 682 30 594 1.24e-133 406
MsG0280011266.01.T01 MTR_8g009500 43.487 476 249 7 198 660 26 494 9.55e-131 397
MsG0280011266.01.T01 MTR_7g076650 36.868 613 283 10 164 682 30 632 1.90e-126 389
MsG0280011266.01.T01 MTR_7g076650 41.082 499 238 8 164 616 30 518 1.11e-122 375
MsG0280011266.01.T01 MTR_8g009500 39.709 481 226 8 151 574 28 501 8.29e-115 355
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011266.01.T01 AT1G79750 75.534 609 115 3 103 686 47 646 0.0 930
MsG0280011266.01.T01 AT5G25880 74.479 576 114 2 136 686 21 588 0.0 892
MsG0280011266.01.T01 AT5G11670 74.232 586 117 3 127 686 11 588 0.0 875
MsG0280011266.01.T01 AT2G19900 74.435 575 114 2 137 686 15 581 0.0 873
MsG0280011266.01.T01 AT5G25880 74.635 548 106 2 136 658 21 560 0.0 846
MsG0280011266.01.T01 AT2G19900 78.395 486 97 1 201 686 5 482 0.0 783
MsG0280011266.01.T01 AT5G25880 73.497 449 86 2 136 559 21 461 0.0 686
MsG0280011266.01.T01 AT2G13560 41.075 577 275 10 164 682 46 615 1.19e-141 428
MsG0280011266.01.T01 AT4G00570 39.616 573 281 11 164 682 39 600 1.70e-132 404

Find 205 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATTCAACCGGCGAAAA+TGG 0.198852 2:+81696035 None:intergenic
ATTAAGCCAACAGTGCTTAT+TGG 0.199640 2:-81696411 MsG0280011266.01.T01:CDS
GTATATGTTTGAATTGAAAA+TGG 0.253491 2:-81694944 MsG0280011266.01.T01:three_prime_UTR
GGTGGGTTAGTAAGGAAATT+AGG 0.273545 2:-81695104 MsG0280011266.01.T01:three_prime_UTR
CTCAATGATGAATTATATAT+CGG 0.286816 2:-81697429 MsG0280011266.01.T01:CDS
TTCAAGAAGTACTGAGAAAT+TGG 0.292051 2:-81697905 MsG0280011266.01.T01:CDS
ACGGCATCGGTTGTTCTTGC+TGG 0.299277 2:-81697025 MsG0280011266.01.T01:CDS
ACCTTTGAAAGAAATTAAAA+AGG 0.309592 2:-81699223 MsG0280011266.01.T01:CDS
ACTAGTTGCAGCTTTGAAAT+TGG 0.312159 2:-81697002 MsG0280011266.01.T01:CDS
TTCGAAAGAGAGAGAATAAT+AGG 0.315133 2:+81696222 None:intergenic
CACCGGTAGCTTCTGTAGGC+TGG 0.319833 2:+81695251 None:intergenic
CCTTCCACAGCCGAAAGATT+TGG 0.330794 2:-81695303 MsG0280011266.01.T01:CDS
TTTACAAGTCATAATTGTAT+TGG 0.330980 2:-81695126 MsG0280011266.01.T01:three_prime_UTR
TTACAAGTCATAATTGTATT+GGG 0.337018 2:-81695125 MsG0280011266.01.T01:three_prime_UTR
GGAAGAAGTTGAGGGTAGTT+TGG 0.339854 2:-81700096 None:intergenic
ATATTCCCTGGTTTCGGCCT+AGG 0.341563 2:-81695890 MsG0280011266.01.T01:CDS
GACGAAGTGCGCAAGAATAT+TGG 0.343612 2:-81696642 MsG0280011266.01.T01:CDS
CGCAACCAGATGCACCTTCC+TGG 0.347752 2:-81699716 MsG0280011266.01.T01:intron
GGCCTAGGTTTAATAATGTC+TGG 0.353628 2:-81695875 MsG0280011266.01.T01:CDS
GAGAACGGATCTTGGGTCTT+GGG 0.354537 2:-81697845 MsG0280011266.01.T01:CDS
CTGCCATTTCTATCATTGAT+TGG 0.363401 2:+81699267 None:intergenic
CATCGCCTCAACCACCTCTT+TGG 0.369878 2:+81696362 None:intergenic
TTGTATTGGGTGGGTTAGTA+AGG 0.371068 2:-81695112 MsG0280011266.01.T01:three_prime_UTR
ATCTTGGGTCTTGGGGATCT+AGG 0.377783 2:-81697837 MsG0280011266.01.T01:CDS
GCATACATATTCCCTGGTTT+CGG 0.381227 2:-81695896 MsG0280011266.01.T01:CDS
AACTGACGGAGAACGGATCT+TGG 0.382641 2:-81697853 MsG0280011266.01.T01:CDS
CTAAAGCAAAGACGAGCAAC+TGG 0.382953 2:-81697405 MsG0280011266.01.T01:CDS
TGCACTTGAAACATCTAAAC+AGG 0.390476 2:-81696771 MsG0280011266.01.T01:CDS
TTGCAGCTTTGAAATTGGTT+GGG 0.391250 2:-81696997 MsG0280011266.01.T01:CDS
GACCACAAATTCTTATTCCT+TGG 0.393449 2:-81696962 MsG0280011266.01.T01:CDS
TGGTGGTTGCAGGCGGGCAC+TGG 0.394769 2:-81696809 MsG0280011266.01.T01:intron
TTTCTTGAGGAATAGTTGTT+GGG 0.398481 2:+81698513 None:intergenic
AATGTTGGAGTGATTCTTTA+CGG 0.399579 2:+81696587 None:intergenic
GGCGGTCCTCGTGATGTTTA+CGG 0.403565 2:-81699159 MsG0280011266.01.T01:CDS
TGATGTTTACGGCGAGGATA+AGG 0.403820 2:-81699148 MsG0280011266.01.T01:CDS
GCAAACTTCACCAAATCTTT+CGG 0.406965 2:+81695293 None:intergenic
GTTTCTTGAGGAATAGTTGT+TGG 0.410920 2:+81698512 None:intergenic
ACGGTATTCAAATTTAGAAA+TGG 0.412514 2:-81695007 MsG0280011266.01.T01:three_prime_UTR
TTTGTGAGGTCACCTTAAAA+AGG 0.413924 2:+81700009 None:intergenic
TCTTGCGCACTTCGTCCAAT+GGG 0.414035 2:+81696649 None:intergenic
ATGTTGGAGTGATTCTTTAC+GGG 0.416918 2:+81696588 None:intergenic
AGCTTCTTCAGCGGTACATT+CGG 0.417313 2:+81696185 None:intergenic
GGTGGACAGAGAAGGGGTTA+TGG 0.419901 2:-81699315 MsG0280011266.01.T01:CDS
GGAGAACGGATCTTGGGTCT+TGG 0.422394 2:-81697846 MsG0280011266.01.T01:CDS
GTCCCAACGTCAATAGTAAT+AGG 0.429982 2:+81697468 None:intergenic
ACTTTCCCCTTATATTCAAC+CGG 0.431090 2:+81696026 None:intergenic
GGCGAGGCTTGCCAGAAATA+CGG 0.435554 2:-81698117 MsG0280011266.01.T01:CDS
TCACCAATCAATGATAGAAA+TGG 0.438037 2:-81699270 MsG0280011266.01.T01:CDS
TAGTGGTAGTTGGACTACTA+AGG 0.438046 2:-81695075 MsG0280011266.01.T01:three_prime_UTR
ACCGGTAGCTTCTGTAGGCT+GGG 0.438513 2:+81695252 None:intergenic
TATAGAGAGAGAGATTGTTA+AGG 0.443292 2:+81699820 None:intergenic
GATTACCAGGAAGGTGCATC+TGG 0.447748 2:+81699711 None:intergenic
TACATTCGGACTGTGATGTT+GGG 0.447948 2:+81696199 None:intergenic
TTCTTGCGCACTTCGTCCAA+TGG 0.448381 2:+81696648 None:intergenic
ATGACTTGAATGTTCTTCTC+AGG 0.450733 2:+81697882 None:intergenic
GAAAGTGTTTGTGCCTGGCC+AGG 0.451079 2:-81696009 MsG0280011266.01.T01:intron
TCTTGGGGATCTAGGTTGTC+AGG 0.451273 2:-81697829 MsG0280011266.01.T01:intron
ACTGACGGAGAACGGATCTT+GGG 0.451817 2:-81697852 MsG0280011266.01.T01:CDS
ATAAGCTTTAGCAGCAACTT+TGG 0.454475 2:+81695608 None:intergenic
GCGAGGCTTGCCAGAAATAC+GGG 0.458405 2:-81698116 MsG0280011266.01.T01:CDS
TAGGAAGGTGTAGTGGTAGT+TGG 0.462789 2:-81695085 MsG0280011266.01.T01:three_prime_UTR
TATATTCAACCGGCGAAAAT+GGG 0.463892 2:+81696036 None:intergenic
TGCCTATTACTATTGACGTT+GGG 0.467929 2:-81697470 MsG0280011266.01.T01:CDS
AAAATATAGATCAACACATC+TGG 0.469282 2:-81697167 MsG0280011266.01.T01:CDS
AGGATCACTTTGTGACTCCT+TGG 0.470415 2:-81699119 MsG0280011266.01.T01:CDS
CCCACGGCTTCTTGAAATGT+TGG 0.470716 2:+81696572 None:intergenic
TGGGAAATGGTGTTCAATCC+TGG 0.472484 2:-81700061 MsG0280011266.01.T01:CDS
GTTGCAGCTTTGAAATTGGT+TGG 0.474733 2:-81696998 MsG0280011266.01.T01:CDS
CTTGGAGTGTTTCTGTTGCT+AGG 0.475788 2:-81699101 MsG0280011266.01.T01:intron
CTTTCTTTATATACTGCACT+AGG 0.479696 2:-81697674 MsG0280011266.01.T01:CDS
AGCTGAAATCTTTCTGATGT+TGG 0.479781 2:+81695641 None:intergenic
TGCAGCTTTGAAATTGGTTG+GGG 0.485824 2:-81696996 MsG0280011266.01.T01:CDS
TTCACCAAATCTTTCGGCTG+TGG 0.487173 2:+81695299 None:intergenic
CAAAGAGGTGGTTGAGGCGA+TGG 0.487602 2:-81696361 MsG0280011266.01.T01:CDS
GTAGATGATAATCCGATCTC+TGG 0.489891 2:-81699183 MsG0280011266.01.T01:CDS
AACTTGTTTCAACAAGTGCC+AGG 0.492140 2:+81700043 None:intergenic
TAGTTTGGTAAGACCGAGGA+TGG 0.494244 2:-81700081 MsG0280011266.01.T01:exon
GTACATTCGGACTGTGATGT+TGG 0.495071 2:+81696198 None:intergenic
CAGGAAGGTGCATCTGGTTG+CGG 0.497828 2:+81699717 None:intergenic
ATCTTTCTGATGTTGGTGAA+TGG 0.499491 2:+81695648 None:intergenic
TCTTGGGCTTAGACCTGGCC+AGG 0.502152 2:+81695996 None:intergenic
ACTAAGTACCTCGTTAATAG+AGG 0.503924 2:+81696338 None:intergenic
AATAATGCATACATATTCCC+TGG 0.508008 2:-81695902 MsG0280011266.01.T01:CDS
GCCTAGGTTTAATAATGTCT+GGG 0.511042 2:-81695874 MsG0280011266.01.T01:CDS
CGAGATCCACACTTCAACAA+AGG 0.513276 2:-81698590 MsG0280011266.01.T01:CDS
TTTGTTCCAGGGAACGGCAT+CGG 0.514994 2:-81697038 MsG0280011266.01.T01:intron
TTCCTCACCTGAGTTTCTTG+AGG 0.515530 2:+81698500 None:intergenic
GTAAGACCGAGGATGGGAAA+TGG 0.515743 2:-81700074 MsG0280011266.01.T01:exon
TATTGGTTGGTGGACTCAAA+GGG 0.515848 2:-81696625 MsG0280011266.01.T01:CDS
CATTTCTGATACAGCAAAGC+AGG 0.516038 2:-81699777 MsG0280011266.01.T01:CDS
ACAGTGCTTATTGGAACATC+GGG 0.517722 2:-81696402 MsG0280011266.01.T01:CDS
TGCTCAGGATTAGGTGGGAG+TGG 0.522946 2:-81699348 MsG0280011266.01.T01:intron
AAGTCATAATTGTATTGGGT+GGG 0.523261 2:-81695121 MsG0280011266.01.T01:three_prime_UTR
CATCTGTGGTGGACAGAGAA+GGG 0.524428 2:-81699322 MsG0280011266.01.T01:CDS
CAGTTGGAGTATACACGATT+GGG 0.524429 2:+81698142 None:intergenic
TGGCAAGCCTCGCCAACAGT+TGG 0.524943 2:+81698126 None:intergenic
CACCAAGGAATAAGAATTTG+TGG 0.527209 2:+81696960 None:intergenic
AAATTCTTATTCCTTGGTGC+CGG 0.527719 2:-81696956 MsG0280011266.01.T01:CDS
TCAATGATGAATTATATATC+GGG 0.527768 2:-81697428 MsG0280011266.01.T01:CDS
ACTTACAGGCAGCAAGAAGC+AGG 0.528795 2:+81695831 None:intergenic
TTCTTAGGGAATGGGAATAC+CGG 0.532496 2:-81697705 MsG0280011266.01.T01:intron
AGAACGGATCTTGGGTCTTG+GGG 0.533680 2:-81697844 MsG0280011266.01.T01:CDS
GAGATCCACACTTCAACAAA+GGG 0.535263 2:-81698589 MsG0280011266.01.T01:CDS
AAGGGGAAAGTGTTTGTGCC+TGG 0.536779 2:-81696014 MsG0280011266.01.T01:CDS
CCAAATCTTTCGGCTGTGGA+AGG 0.537409 2:+81695303 None:intergenic
AGAGAAGGGGTTATGGACCT+TGG 0.537944 2:-81699308 MsG0280011266.01.T01:CDS
GCTGCTAAAGCTTATGAACT+TGG 0.538654 2:-81695600 MsG0280011266.01.T01:intron
TGAACACCATTTCCCATCCT+CGG 0.538701 2:+81700068 None:intergenic
ACAGTTGGAGTATACACGAT+TGG 0.538743 2:+81698141 None:intergenic
CAGGGTTGCTCAGGATTAGG+TGG 0.538947 2:-81699354 MsG0280011266.01.T01:intron
ATCAGAAGAGAACTTTGAGA+AGG 0.539232 2:-81695685 MsG0280011266.01.T01:CDS
ATATTGGTTGGTGGACTCAA+AGG 0.540672 2:-81696626 MsG0280011266.01.T01:CDS
TTATTGTCTCGTTGTATCAC+CGG 0.541338 2:+81695234 None:intergenic
TTCTGATGTTGGTGAATGGT+GGG 0.541430 2:+81695652 None:intergenic
GAATGGAACAGCTGAGGCAT+TGG 0.543029 2:-81695718 MsG0280011266.01.T01:intron
AACTATTCCTCAAGAAACTC+AGG 0.543335 2:-81698507 MsG0280011266.01.T01:intron
TAGTCGTAACTGACGGAGAA+CGG 0.544724 2:-81697860 MsG0280011266.01.T01:CDS
GATGCAGACAAATGCCCCAT+TGG 0.548923 2:-81696664 MsG0280011266.01.T01:CDS
CAAGTCATAATTGTATTGGG+TGG 0.549761 2:-81695122 MsG0280011266.01.T01:three_prime_UTR
TCAGAAGAGAACTTTGAGAA+GGG 0.550927 2:-81695684 MsG0280011266.01.T01:CDS
GCAAAGACGAGCAACTGGGC+AGG 0.551006 2:-81697400 MsG0280011266.01.T01:CDS
GAAGGGGTTATGGACCTTGG+AGG 0.553034 2:-81699305 MsG0280011266.01.T01:CDS
GAGAAAATGGATTACCAGGA+AGG 0.553962 2:+81699702 None:intergenic
GCATTTGTCTGCATCAAAGA+TGG 0.555153 2:+81696672 None:intergenic
GCCAACCCTTTGTTGAAGTG+TGG 0.558358 2:+81698584 None:intergenic
ACTGCAGTCAAGCAAACTTA+CGG 0.561180 2:-81697348 MsG0280011266.01.T01:CDS
ATTAAACCTAGGCCGAAACC+AGG 0.561358 2:+81695884 None:intergenic
CTGCCTATTACTATTGACGT+TGG 0.562046 2:-81697471 MsG0280011266.01.T01:CDS
TTCTTGAGGAATAGTTGTTG+GGG 0.562054 2:+81698514 None:intergenic
TCCAACATTTCAAGAAGCCG+TGG 0.562460 2:-81696573 MsG0280011266.01.T01:CDS
GTATCACCGGTAGCTTCTGT+AGG 0.562772 2:+81695247 None:intergenic
CAACGTCAATAGTAATAGGC+AGG 0.562884 2:+81697472 None:intergenic
CGAGGACCGCCACCAGAGAT+CGG 0.565872 2:+81699171 None:intergenic
GACATACACGTCACCCTCCA+AGG 0.567462 2:+81699291 None:intergenic
GATGTTCCAATAAGCACTGT+TGG 0.567606 2:+81696405 None:intergenic
AAGGGGTTATGGACCTTGGA+GGG 0.567884 2:-81699304 MsG0280011266.01.T01:CDS
CAAGCAGATCAAAAGCATTG+TGG 0.567935 2:+81697191 None:intergenic
ACATCTGTGGTGGACAGAGA+AGG 0.570588 2:-81699323 MsG0280011266.01.T01:CDS
AGGAAATTAGGAAGGTGTAG+TGG 0.573108 2:-81695092 MsG0280011266.01.T01:three_prime_UTR
AACAGTGCTTATTGGAACAT+CGG 0.574999 2:-81696403 MsG0280011266.01.T01:CDS
CTTGAAACATCTAAACAGGT+TGG 0.576353 2:-81696767 MsG0280011266.01.T01:intron
TTTCGCCGGTTGAATATAAG+GGG 0.577166 2:-81696031 MsG0280011266.01.T01:CDS
TGCGCAAGAATATTGGTTGG+TGG 0.581272 2:-81696635 MsG0280011266.01.T01:CDS
GGTTGCGGAGATCATGATGA+TGG 0.581814 2:+81699732 None:intergenic
TGGCAGTGTTGTTAATGTGA+TGG 0.582189 2:-81699250 MsG0280011266.01.T01:CDS
TGAAATATACTTACAGCTGA+AGG 0.582276 2:+81697641 None:intergenic
TTTCTGATGTTGGTGAATGG+TGG 0.584930 2:+81695651 None:intergenic
CTTATTGGAACATCGGGACA+AGG 0.586028 2:-81696396 MsG0280011266.01.T01:CDS
ATCGTGTATACTCCAACTGT+TGG 0.586387 2:-81698138 MsG0280011266.01.T01:CDS
GGTTAGTAAGGAAATTAGGA+AGG 0.589372 2:-81695100 MsG0280011266.01.T01:three_prime_UTR
CTTATTCCTTGGTGCCGGCG+AGG 0.593339 2:-81696951 MsG0280011266.01.T01:intron
CCGGTAGCTTCTGTAGGCTG+GGG 0.599908 2:+81695253 None:intergenic
TCCACACTTCAACAAAGGGT+TGG 0.604356 2:-81698585 MsG0280011266.01.T01:CDS
GACATACCTCGCCGGCACCA+AGG 0.605182 2:+81696945 None:intergenic
GTTTACCAAAGAGGTGGTTG+AGG 0.606667 2:-81696367 MsG0280011266.01.T01:CDS
GATGATAATCCGATCTCTGG+TGG 0.606918 2:-81699180 MsG0280011266.01.T01:CDS
GTATACTCCAACTGTTGGCG+AGG 0.612280 2:-81698133 MsG0280011266.01.T01:CDS
GGTTCGTGTTCATGAGCCCA+CGG 0.614980 2:+81696556 None:intergenic
TGGGGTATACATACAGCTCT+CGG 0.615153 2:+81695271 None:intergenic
AGGAAGTGCGTTTACCAAAG+AGG 0.621719 2:-81696376 MsG0280011266.01.T01:CDS
GATAATCCGATCTCTGGTGG+CGG 0.626841 2:-81699177 MsG0280011266.01.T01:CDS
GGAGATCATGATGATGGGTA+TGG 0.627196 2:+81699738 None:intergenic
CCCCAGCCTACAGAAGCTAC+CGG 0.627715 2:-81695253 MsG0280011266.01.T01:CDS
ATCTGTGGTGGACAGAGAAG+GGG 0.627759 2:-81699321 MsG0280011266.01.T01:CDS
GTACATTAACAGCATCGAGA+AGG 0.628699 2:+81696524 None:intergenic
TTTCGGCTGTGGAAGGCGAG+TGG 0.629320 2:+81695310 None:intergenic
GGACGTGCGATCTTTGCAAG+TGG 0.629712 2:-81696062 MsG0280011266.01.T01:CDS
AGGGTTGCTCAGGATTAGGT+GGG 0.630605 2:-81699353 MsG0280011266.01.T01:intron
GGGAGTGGTAACATCTGTGG+TGG 0.633634 2:-81699333 MsG0280011266.01.T01:CDS
AGTGGTAGTTGGACTACTAA+GGG 0.634455 2:-81695074 MsG0280011266.01.T01:three_prime_UTR
GACGTGCGATCTTTGCAAGT+GGG 0.636596 2:-81696061 MsG0280011266.01.T01:CDS
AAAAGAAGATAAGAAAATGG+GGG 0.642535 2:+81695209 None:intergenic
AGGAATAAGACATACCTCGC+CGG 0.646107 2:+81696937 None:intergenic
TCTTTATATACTGCACTAGG+AGG 0.647726 2:-81697671 MsG0280011266.01.T01:CDS
CAGGTCGTCATGTACACGAA+TGG 0.648656 2:+81695850 None:intergenic
AAGTGCGCAAGAATATTGGT+TGG 0.650667 2:-81696638 MsG0280011266.01.T01:CDS
TAAAGCAAAGACGAGCAACT+GGG 0.653376 2:-81697404 MsG0280011266.01.T01:CDS
CAAGTCATAGTCGTAACTGA+CGG 0.653587 2:-81697867 MsG0280011266.01.T01:CDS
TCCTCGTGATGTTTACGGCG+AGG 0.654154 2:-81699154 MsG0280011266.01.T01:CDS
CTTGCGCACTTCGTCCAATG+GGG 0.656636 2:+81696650 None:intergenic
GGTGGGAGTGGTAACATCTG+TGG 0.657067 2:-81699336 MsG0280011266.01.T01:CDS
TTAGGGAATGGGAATACCGG+TGG 0.661512 2:-81697702 MsG0280011266.01.T01:intron
AAGTGCGTTTACCAAAGAGG+TGG 0.663594 2:-81696373 MsG0280011266.01.T01:CDS
TCTTGAGGAATAGTTGTTGG+GGG 0.666205 2:+81698515 None:intergenic
AGTTTGGTAAGACCGAGGAT+GGG 0.666330 2:-81700080 MsG0280011266.01.T01:exon
CCAACATTTCAAGAAGCCGT+GGG 0.668065 2:-81696572 MsG0280011266.01.T01:CDS
TTAAACCTAGGCCGAAACCA+GGG 0.671079 2:+81695885 None:intergenic
TAGGGAATGGGAATACCGGT+GGG 0.671378 2:-81697701 MsG0280011266.01.T01:CDS
AGAAGCTTATACGTGGACCC+AGG 0.672069 2:-81696169 MsG0280011266.01.T01:intron
ATCATCTACATCTTCCACCA+CGG 0.673365 2:+81699197 None:intergenic
ACGTTGGGACAAACAACGAG+AGG 0.675167 2:-81697455 MsG0280011266.01.T01:CDS
TCCTCGCCGTAAACATCACG+AGG 0.677177 2:+81699153 None:intergenic
GTTGCGGAGATCATGATGAT+GGG 0.677547 2:+81699733 None:intergenic
AGGGATGCACACTACTTGCG+TGG 0.680318 2:-81698545 MsG0280011266.01.T01:CDS
AGGGTAGTTTGGTAAGACCG+AGG 0.680927 2:-81700085 MsG0280011266.01.T01:five_prime_UTR
CCGCTGAAGAAGCTTATACG+TGG 0.683051 2:-81696176 MsG0280011266.01.T01:CDS
CGAGGCTTGCCAGAAATACG+GGG 0.683912 2:-81698115 MsG0280011266.01.T01:CDS
GCAGCTTTGAAATTGGTTGG+GGG 0.689153 2:-81696995 MsG0280011266.01.T01:CDS
CTAGCAACAGAAACACTCCA+AGG 0.695145 2:+81699102 None:intergenic
CGGCGAGGATAAGGCCACTG+AGG 0.703363 2:-81699139 MsG0280011266.01.T01:CDS
AAACTTATATAAAGACCCTG+TGG 0.705672 2:+81698078 None:intergenic
CCACGTATAAGCTTCTTCAG+CGG 0.718316 2:+81696176 None:intergenic
GGCGATGGCCTCTATTAACG+AGG 0.722025 2:-81696346 MsG0280011266.01.T01:intron
TCCCAGACATTATTAAACCT+AGG 0.725512 2:+81695873 None:intergenic
AGTCACAAAGTGATCCTCAG+TGG 0.733513 2:+81699125 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTAATTTAATTTAATAA+GGG - Chr2:81696110-81696129 MsG0280011266.01.T01:intron 0.0%
!!! TTATTTAATTTAATTTAATA+AGG - Chr2:81696109-81696128 MsG0280011266.01.T01:intron 0.0%
!! CAAAAAAAATAAAAAATCTT+GGG + Chr2:81699005-81699024 None:intergenic 10.0%
!! GTTAAAACATAAAAAAATAA+TGG + Chr2:81695964-81695983 None:intergenic 10.0%
!!! ATTAATTTTTTTCATTTTGA+TGG - Chr2:81695592-81695611 MsG0280011266.01.T01:intron 10.0%
!! AAAAAAGAAGATAAGAAAAT+GGG + Chr2:81699778-81699797 None:intergenic 15.0%
!! AAATTGATGTAAATGTAATA+AGG - Chr2:81699204-81699223 MsG0280011266.01.T01:CDS 15.0%
!! AACAAAAGATAAAATAAAGT+CGG - Chr2:81699580-81699599 MsG0280011266.01.T01:intron 15.0%
!! CCAAAAAAAATAAAAAATCT+TGG + Chr2:81699006-81699025 None:intergenic 15.0%
!! GATAACATTAAAGATTTAAT+AGG + Chr2:81697471-81697490 None:intergenic 15.0%
!! TCTAAATCACAAAATAAATA+TGG - Chr2:81695301-81695320 MsG0280011266.01.T01:CDS 15.0%
!!! AATATTTTATCTTTTTGGAT+TGG - Chr2:81700069-81700088 MsG0280011266.01.T01:exon 15.0%
!!! ATTAGTTGATTTATTTATCT+GGG - Chr2:81695545-81695564 MsG0280011266.01.T01:intron 15.0%
!!! CCAAGATTTTTTATTTTTTT+TGG - Chr2:81699003-81699022 MsG0280011266.01.T01:intron 15.0%
!!! TTAATTTAATTTAATAAGGG+AGG - Chr2:81696113-81696132 MsG0280011266.01.T01:intron 15.0%
!!! TTTTCTTGAAATAATTTTAC+TGG - Chr2:81699794-81699813 MsG0280011266.01.T01:CDS 15.0%
!! AAAAAGAAGATAAGAAAATG+GGG + Chr2:81699777-81699796 None:intergenic 20.0%
!! AACATATGACGATATAAATT+AGG + Chr2:81696186-81696205 None:intergenic 20.0%
!! CTCAATGATGAATTATATAT+CGG - Chr2:81697553-81697572 MsG0280011266.01.T01:intron 20.0%
!! CTTTAATCTTTCTTATTGAA+TGG - Chr2:81699247-81699266 MsG0280011266.01.T01:CDS 20.0%
!! CTTTCACTTTGATATATTAT+TGG - Chr2:81696755-81696774 MsG0280011266.01.T01:intron 20.0%
!! GAAAAAAGAAGATAAGAAAA+TGG + Chr2:81699779-81699798 None:intergenic 20.0%
!! GTATATGTTTGAATTGAAAA+TGG - Chr2:81700038-81700057 MsG0280011266.01.T01:CDS 20.0%
!! TAAATATTCAACAAGTTTCT+GGG - Chr2:81695330-81695349 MsG0280011266.01.T01:intron 20.0%
!! TCAATGATGAATTATATATC+GGG - Chr2:81697554-81697573 MsG0280011266.01.T01:intron 20.0%
!! TTAAATATTCAACAAGTTTC+TGG - Chr2:81695329-81695348 MsG0280011266.01.T01:intron 20.0%
!! TTAATGTAAAAACCATATGT+TGG - Chr2:81696679-81696698 MsG0280011266.01.T01:CDS 20.0%
!! TTACAAGTCATAATTGTATT+GGG - Chr2:81699857-81699876 MsG0280011266.01.T01:CDS 20.0%
!! TTTACAAGTCATAATTGTAT+TGG - Chr2:81699856-81699875 MsG0280011266.01.T01:CDS 20.0%
!! TTTGAAAGAAATTAAAAAGG+AGG - Chr2:81695762-81695781 MsG0280011266.01.T01:intron 20.0%
!!! ACCTTTGAAAGAAATTAAAA+AGG - Chr2:81695759-81695778 MsG0280011266.01.T01:intron 20.0%
!!! AGTTTTGACAATGTTAAAAA+AGG + Chr2:81696604-81696623 None:intergenic 20.0%
!!! ATGTAGGTTTTTTAAAATCT+TGG - Chr2:81698094-81698113 MsG0280011266.01.T01:CDS 20.0%
!!! ATTTTGTGATTTAGAGAAAA+TGG + Chr2:81695296-81695315 None:intergenic 20.0%
!!! CAATCAAATTTCAAATTTTC+AGG + Chr2:81696053-81696072 None:intergenic 20.0%
!!! GATTAGTTGATTTATTTATC+TGG - Chr2:81695544-81695563 MsG0280011266.01.T01:intron 20.0%
!!! GTCTCAATATTTTATCTTTT+TGG - Chr2:81700064-81700083 MsG0280011266.01.T01:CDS 20.0%
!!! GTTTTGACAATGTTAAAAAA+GGG + Chr2:81696603-81696622 None:intergenic 20.0%
!!! TAGTATTTTCATGTCAAATA+AGG - Chr2:81699028-81699047 MsG0280011266.01.T01:intron 20.0%
!!! TCCTTTTTAATTTCTTTCAA+AGG + Chr2:81695763-81695782 None:intergenic 20.0%
!!! TTATTGTTTCTTTTTCTCTT+GGG - Chr2:81697029-81697048 MsG0280011266.01.T01:CDS 20.0%
!!! TTTATTGTTTCTTTTTCTCT+TGG - Chr2:81697028-81697047 MsG0280011266.01.T01:CDS 20.0%
! AAAAGAAGATAAGAAAATGG+GGG + Chr2:81699776-81699795 None:intergenic 25.0%
! AAAATATAGATCAACACATC+TGG - Chr2:81697815-81697834 MsG0280011266.01.T01:intron 25.0%
! AATACAAAATAGGTTGTCAA+AGG + Chr2:81697259-81697278 None:intergenic 25.0%
! AATTCAAAATATTGCCAATC+AGG + Chr2:81696724-81696743 None:intergenic 25.0%
! ACGGTATTCAAATTTAGAAA+TGG - Chr2:81699975-81699994 MsG0280011266.01.T01:intron 25.0%
! ATCAAATATGAATCTAGCAA+AGG + Chr2:81695987-81696006 None:intergenic 25.0%
! ATGTCAAATAAGGTCTAATT+TGG - Chr2:81699038-81699057 MsG0280011266.01.T01:intron 25.0%
! ATTCCCTAAGAATACAAAAT+AGG + Chr2:81697269-81697288 None:intergenic 25.0%
! GATACTTCATTTCCTATTAT+TGG - Chr2:81697421-81697440 MsG0280011266.01.T01:CDS 25.0%
! GATGTAAATGTAATAAGGTA+TGG - Chr2:81699209-81699228 MsG0280011266.01.T01:CDS 25.0%
! TAATGGTATGATCAAAATCA+AGG + Chr2:81695947-81695966 None:intergenic 25.0%
! TCAAATATGAATCTAGCAAA+GGG + Chr2:81695986-81696005 None:intergenic 25.0%
! TTTACAGTAGGCATTATTTA+CGG + Chr2:81697388-81697407 None:intergenic 25.0%
!! ACAACCTATTTTGTATTCTT+AGG - Chr2:81697262-81697281 MsG0280011266.01.T01:intron 25.0%
!! ATATTATTTTCTCTGTGTGA+CGG - Chr2:81699956-81699975 MsG0280011266.01.T01:intron 25.0%
!! ATTAACGTTCACAATTTTCT+GGG - Chr2:81695443-81695462 MsG0280011266.01.T01:intron 25.0%
!! ATTAAGTTGTTTATCCAAGT+AGG + Chr2:81699492-81699511 None:intergenic 25.0%
!! ATTAGCTGATTTATTCATCT+GGG - Chr2:81695413-81695432 MsG0280011266.01.T01:intron 25.0%
!! ATTTTGTATTCTTAGGGAAT+GGG - Chr2:81697269-81697288 MsG0280011266.01.T01:intron 25.0%
!! CAACCTATTTTGTATTCTTA+GGG - Chr2:81697263-81697282 MsG0280011266.01.T01:intron 25.0%
!! CATATACACAACATAAGTTT+TGG - Chr2:81698516-81698535 MsG0280011266.01.T01:CDS 25.0%
!! TATTAACGTTCACAATTTTC+TGG - Chr2:81695442-81695461 MsG0280011266.01.T01:intron 25.0%
!! TATTTTGTATTCTTAGGGAA+TGG - Chr2:81697268-81697287 MsG0280011266.01.T01:intron 25.0%
!! TTAAGTTGTTTATCCAAGTA+GGG + Chr2:81699491-81699510 None:intergenic 25.0%
!! TTAATGTACGGTCAATTTTT+CGG - Chr2:81698472-81698491 MsG0280011266.01.T01:intron 25.0%
!! TTGAAATTTGAGCGTATTTT+TGG - Chr2:81698863-81698882 MsG0280011266.01.T01:intron 25.0%
!! TTTGATATATTATTGGTTGC+AGG - Chr2:81696762-81696781 MsG0280011266.01.T01:intron 25.0%
!!! ATTCTGTTTCATTTTTCTCA+GGG - Chr2:81698899-81698918 MsG0280011266.01.T01:intron 25.0%
!!! TATTCTGTTTCATTTTTCTC+AGG - Chr2:81698898-81698917 MsG0280011266.01.T01:intron 25.0%
!!! TATTGTTTCTTTTTCTCTTG+GGG - Chr2:81697030-81697049 MsG0280011266.01.T01:CDS 25.0%
!!! TTTTGAAACTTGTTAGATGT+AGG - Chr2:81698078-81698097 MsG0280011266.01.T01:CDS 25.0%
AAAATTCTACGAGGATAAAC+AGG + Chr2:81696958-81696977 None:intergenic 30.0%
AAACTTATATAAAGACCCTG+TGG + Chr2:81696907-81696926 None:intergenic 30.0%
AACAAAAAACCAAAGAAGGT+GGG + Chr2:81696627-81696646 None:intergenic 30.0%
AAGAGAAATGAATGTGTTGT+TGG + Chr2:81695024-81695043 None:intergenic 30.0%
AAGTCATAATTGTATTGGGT+GGG - Chr2:81699861-81699880 MsG0280011266.01.T01:intron 30.0%
AATAATGCATACATATTCCC+TGG - Chr2:81699080-81699099 MsG0280011266.01.T01:intron 30.0%
AATGTTGGAGTGATTCTTTA+CGG + Chr2:81698398-81698417 None:intergenic 30.0%
AATTAACTTCCACCAACATA+TGG + Chr2:81696694-81696713 None:intergenic 30.0%
AATTAGTACAGATTACAGTC+CGG + Chr2:81697721-81697740 None:intergenic 30.0%
ACTTTATCTACTTTGTTCCA+GGG - Chr2:81697933-81697952 MsG0280011266.01.T01:intron 30.0%
AGAGACAGAAAACAGAAAAA+TGG + Chr2:81697744-81697763 None:intergenic 30.0%
AGTTTCAAAATGCTATGTCA+AGG + Chr2:81698068-81698087 None:intergenic 30.0%
ATGTAAAAACCATATGTTGG+TGG - Chr2:81696682-81696701 MsG0280011266.01.T01:intron 30.0%
CACTATGCATAACCAATAAT+AGG + Chr2:81697436-81697455 None:intergenic 30.0%
CATGAACAAAAAACCAAAGA+AGG + Chr2:81696631-81696650 None:intergenic 30.0%
CTTTCTTTATATACTGCACT+AGG - Chr2:81697308-81697327 MsG0280011266.01.T01:intron 30.0%
GATCATTGTAAGTTTACAGT+AGG + Chr2:81697400-81697419 None:intergenic 30.0%
GTAATAAGGTATGGTTGAAA+TGG - Chr2:81699218-81699237 MsG0280011266.01.T01:CDS 30.0%
GTCTTAATTCAGGTATCAAT+CGG - Chr2:81697664-81697683 MsG0280011266.01.T01:CDS 30.0%
TAAAATCTTGGAGTAACAAC+TGG - Chr2:81698106-81698125 MsG0280011266.01.T01:CDS 30.0%
TAAGAGTTCTGTATGTATGT+TGG - Chr2:81696312-81696331 MsG0280011266.01.T01:intron 30.0%
TAATTAAGCGCTTATAGCAT+AGG - Chr2:81699508-81699527 MsG0280011266.01.T01:intron 30.0%
TATAGAGAGAGAGATTGTTA+AGG + Chr2:81695165-81695184 None:intergenic 30.0%
TCACCAATCAATGATAGAAA+TGG - Chr2:81695712-81695731 MsG0280011266.01.T01:intron 30.0%
TGAAATATACTTACAGCTGA+AGG + Chr2:81697344-81697363 None:intergenic 30.0%
TTACAGTAGGCATTATTTAC+GGG + Chr2:81697387-81697406 None:intergenic 30.0%
TTACATCCATTTACTCTTTG+TGG - Chr2:81698135-81698154 MsG0280011266.01.T01:CDS 30.0%
TTCGAAAGAGAGAGAATAAT+AGG + Chr2:81698763-81698782 None:intergenic 30.0%
TTGCAACAAAAAATTCTACG+AGG + Chr2:81696967-81696986 None:intergenic 30.0%
TTGTGTATATGCATGTATCA+AGG + Chr2:81698507-81698526 None:intergenic 30.0%
TTTCTTGAGGAATAGTTGTT+GGG + Chr2:81696472-81696491 None:intergenic 30.0%
! AAAAGGCACAATTTATTTCC+TGG - Chr2:81697691-81697710 MsG0280011266.01.T01:CDS 30.0%
! ACAAGTTAGTTTCTATTACC+TGG + Chr2:81698834-81698853 None:intergenic 30.0%
! CAAGTTAGTTTCTATTACCT+GGG + Chr2:81698833-81698852 None:intergenic 30.0%
! GATTAGCTGATTTATTCATC+TGG - Chr2:81695412-81695431 MsG0280011266.01.T01:intron 30.0%
! TACATGTTTTGCATCTTTGA+AGG - Chr2:81699443-81699462 MsG0280011266.01.T01:intron 30.0%
! TATAAAGAAAGTTTTCCCAC+CGG + Chr2:81697299-81697318 None:intergenic 30.0%
! TGTGTTGTTGGAATGAATTA+TGG + Chr2:81695012-81695031 None:intergenic 30.0%
!! AGGCACTGTAATGATTTTAA+CGG + Chr2:81697493-81697512 None:intergenic 30.0%
!! ATTGTTTCTTTTTCTCTTGG+GGG - Chr2:81697031-81697050 MsG0280011266.01.T01:CDS 30.0%
!! ATTTGGATGTTTTGTTCATC+AGG - Chr2:81699055-81699074 MsG0280011266.01.T01:intron 30.0%
!! TTCAAGAAGTACTGAGAAAT+TGG - Chr2:81697077-81697096 MsG0280011266.01.T01:intron 30.0%
!! TTTAGAGAAAATGGATTACC+AGG + Chr2:81695287-81695306 None:intergenic 30.0%
!! TTTATCTTTTTGGATTGGAG+AGG - Chr2:81700074-81700093 MsG0280011266.01.T01:exon 30.0%
!!! GGTTGATTCTTTGTTTTTAG+TGG - Chr2:81696356-81696375 MsG0280011266.01.T01:CDS 30.0%
AACAGTGCTTATTGGAACAT+CGG - Chr2:81698579-81698598 MsG0280011266.01.T01:CDS 35.0%
AACTATTCCTCAAGAAACTC+AGG - Chr2:81696475-81696494 MsG0280011266.01.T01:intron 35.0%
ACTAAGTACCTCGTTAATAG+AGG + Chr2:81698647-81698666 None:intergenic 35.0%
ACTTTCCCCTTATATTCAAC+CGG + Chr2:81698959-81698978 None:intergenic 35.0%
AGCTGAAATCTTTCTGATGT+TGG + Chr2:81699344-81699363 None:intergenic 35.0%
AGGTATCAATCGGTATCAAA+AGG - Chr2:81697674-81697693 MsG0280011266.01.T01:CDS 35.0%
ATGACTTGAATGTTCTTCTC+AGG + Chr2:81697103-81697122 None:intergenic 35.0%
ATGTTGGAGTGATTCTTTAC+GGG + Chr2:81698397-81698416 None:intergenic 35.0%
ATTAAGCCAACAGTGCTTAT+TGG - Chr2:81698571-81698590 MsG0280011266.01.T01:CDS 35.0%
ATTCAGACATGAGATTGCAT+GGG + Chr2:81698699-81698718 None:intergenic 35.0%
CAAAGATGCAAAACATGTAC+TGG + Chr2:81699442-81699461 None:intergenic 35.0%
CAAATCAGTTGTGAACTTAC+AGG + Chr2:81699168-81699187 None:intergenic 35.0%
CAAGTCATAATTGTATTGGG+TGG - Chr2:81699860-81699879 MsG0280011266.01.T01:CDS 35.0%
CAATTTATTTCCTGGCTTAC+CGG - Chr2:81697699-81697718 MsG0280011266.01.T01:CDS 35.0%
CACCAAGGAATAAGAATTTG+TGG + Chr2:81698025-81698044 None:intergenic 35.0%
CACTTTATCTACTTTGTTCC+AGG - Chr2:81697932-81697951 MsG0280011266.01.T01:intron 35.0%
CGGTGAAAAAGTCTTAATTC+AGG - Chr2:81697654-81697673 MsG0280011266.01.T01:intron 35.0%
CTTAAGCCACAAAGAGTAAA+TGG + Chr2:81698144-81698163 None:intergenic 35.0%
CTTGAAACATCTAAACAGGT+TGG - Chr2:81698215-81698234 MsG0280011266.01.T01:intron 35.0%
GAACAAAAAACCAAAGAAGG+TGG + Chr2:81696628-81696647 None:intergenic 35.0%
GACCACAAATTCTTATTCCT+TGG - Chr2:81698020-81698039 MsG0280011266.01.T01:intron 35.0%
GACGACATAAAATGTTGACA+AGG + Chr2:81696581-81696600 None:intergenic 35.0%
GATGGAAATTATTACGAGCA+GGG - Chr2:81695610-81695629 MsG0280011266.01.T01:CDS 35.0%
GCAAACTTCACCAAATCTTT+CGG + Chr2:81699692-81699711 None:intergenic 35.0%
GCCTAGGTTTAATAATGTCT+GGG - Chr2:81699108-81699127 MsG0280011266.01.T01:CDS 35.0%
GGTTAGTAAGGAAATTAGGA+AGG - Chr2:81699882-81699901 MsG0280011266.01.T01:intron 35.0%
GTTTCTTGAGGAATAGTTGT+TGG + Chr2:81696473-81696492 None:intergenic 35.0%
TAAAAATGTCCCCGTATTTC+TGG + Chr2:81696879-81696898 None:intergenic 35.0%
TAGAATAGAGACTCGATCAA+AGG + Chr2:81696994-81697013 None:intergenic 35.0%
TATATTCAACCGGCGAAAAT+GGG + Chr2:81698949-81698968 None:intergenic 35.0%
TATTCAGACATGAGATTGCA+TGG + Chr2:81698700-81698719 None:intergenic 35.0%
TCAACCAACATGTAAGAACA+TGG + Chr2:81696342-81696361 None:intergenic 35.0%
TCCCAGACATTATTAAACCT+AGG + Chr2:81699112-81699131 None:intergenic 35.0%
TCTTTATATACTGCACTAGG+AGG - Chr2:81697311-81697330 MsG0280011266.01.T01:intron 35.0%
TGATCCATGTTCTTACATGT+TGG - Chr2:81696335-81696354 MsG0280011266.01.T01:intron 35.0%
TGATGGAAATTATTACGAGC+AGG - Chr2:81695609-81695628 MsG0280011266.01.T01:CDS 35.0%
TGCACTTGAAACATCTAAAC+AGG - Chr2:81698211-81698230 MsG0280011266.01.T01:intron 35.0%
TGCCTATTACTATTGACGTT+GGG - Chr2:81697512-81697531 MsG0280011266.01.T01:intron 35.0%
TGTGGCTTAAGTGTATTGTT+TGG - Chr2:81698153-81698172 MsG0280011266.01.T01:CDS 35.0%
TTATATTCAACCGGCGAAAA+TGG + Chr2:81698950-81698969 None:intergenic 35.0%
TTATTGTCTCGTTGTATCAC+CGG + Chr2:81699751-81699770 None:intergenic 35.0%
TTCTCGATGCTGTTAATGTA+CGG - Chr2:81698460-81698479 MsG0280011266.01.T01:intron 35.0%
TTCTTGAGGAATAGTTGTTG+GGG + Chr2:81696471-81696490 None:intergenic 35.0%
TTGGTGGAAGTTAATTCACA+TGG - Chr2:81696698-81696717 MsG0280011266.01.T01:intron 35.0%
TTTGTGAGGTCACCTTAAAA+AGG + Chr2:81694976-81694995 None:intergenic 35.0%
! AAATTCTTATTCCTTGGTGC+CGG - Chr2:81698026-81698045 MsG0280011266.01.T01:intron 35.0%
! ATAAGCTTTAGCAGCAACTT+TGG + Chr2:81699377-81699396 None:intergenic 35.0%
! ATCAGAAGAGAACTTTGAGA+AGG - Chr2:81699297-81699316 MsG0280011266.01.T01:CDS 35.0%
! ATCTTTCTGATGTTGGTGAA+TGG + Chr2:81699337-81699356 None:intergenic 35.0%
! CTGCCATTTCTATCATTGAT+TGG + Chr2:81695718-81695737 None:intergenic 35.0%
! TCAGAAGAGAACTTTGAGAA+GGG - Chr2:81699298-81699317 MsG0280011266.01.T01:CDS 35.0%
! TTCTTGTTTGCATTTCTGTC+AGG - Chr2:81699644-81699663 MsG0280011266.01.T01:intron 35.0%
!! AAGTAGATAAAGTGTCGAGA+CGG + Chr2:81697926-81697945 None:intergenic 35.0%
!! ACTAGTTGCAGCTTTGAAAT+TGG - Chr2:81697980-81697999 MsG0280011266.01.T01:intron 35.0%
!! ATTTTCAGGAACACCAATTG+AGG + Chr2:81696039-81696058 None:intergenic 35.0%
!! ATTTTCGCCGGTTGAATATA+AGG - Chr2:81698949-81698968 MsG0280011266.01.T01:intron 35.0%
!! TGGGGGGTGTTTAAATTATA+GGG - Chr2:81697048-81697067 MsG0280011266.01.T01:intron 35.0%
!! TTGCAGCTTTGAAATTGGTT+GGG - Chr2:81697985-81698004 MsG0280011266.01.T01:intron 35.0%
!! TTGGGGGGTGTTTAAATTAT+AGG - Chr2:81697047-81697066 MsG0280011266.01.T01:intron 35.0%
!! TTGTTTCTTTTTCTCTTGGG+GGG - Chr2:81697032-81697051 MsG0280011266.01.T01:intron 35.0%
!! TTTTCAGGAACACCAATTGA+GGG + Chr2:81696038-81696057 None:intergenic 35.0%
!! TTTTCGCCGGTTGAATATAA+GGG - Chr2:81698950-81698969 MsG0280011266.01.T01:intron 35.0%
!!! ATCCCTCTCTTTTTCAGTAA+AGG + Chr2:81696423-81696442 None:intergenic 35.0%
!!! TTGCATCTTTGAAGGCATTT+TGG - Chr2:81699451-81699470 MsG0280011266.01.T01:intron 35.0%
AAAAATCTTGGGCTTAGACC+TGG + Chr2:81698994-81699013 None:intergenic 40.0%
AAAATGACGAACACCCTACT+TGG - Chr2:81699475-81699494 MsG0280011266.01.T01:intron 40.0%
AAACTCAACTCAGCATCATC+AGG - Chr2:81695097-81695116 MsG0280011266.01.T01:three_prime_UTR 40.0%
AAGGTATGGTTGAAATGGCA+TGG - Chr2:81699223-81699242 MsG0280011266.01.T01:CDS 40.0%
AAGTGCGCAAGAATATTGGT+TGG - Chr2:81698344-81698363 MsG0280011266.01.T01:intron 40.0%
ACAGTGCTTATTGGAACATC+GGG - Chr2:81698580-81698599 MsG0280011266.01.T01:CDS 40.0%
ACAGTTGGAGTATACACGAT+TGG + Chr2:81696844-81696863 None:intergenic 40.0%
ACTGCAGTCAAGCAAACTTA+CGG - Chr2:81697634-81697653 MsG0280011266.01.T01:intron 40.0%
ACTGGAGTTGAGAAAAGGAA+AGG + Chr2:81699424-81699443 None:intergenic 40.0%
AGAAATTAAAAAGGAGGCCG+TGG - Chr2:81695768-81695787 MsG0280011266.01.T01:intron 40.0%
AGTGGTAGTTGGACTACTAA+GGG - Chr2:81699908-81699927 MsG0280011266.01.T01:intron 40.0%
ATCATCTACATCTTCCACCA+CGG + Chr2:81695788-81695807 None:intergenic 40.0%
ATCGTGTATACTCCAACTGT+TGG - Chr2:81696844-81696863 MsG0280011266.01.T01:intron 40.0%
ATCTACTTTGTTCCAGGGAA+CGG - Chr2:81697938-81697957 MsG0280011266.01.T01:intron 40.0%
ATTCTACGAGGATAAACAGG+CGG + Chr2:81696955-81696974 None:intergenic 40.0%
CAACGTCAATAGTAATAGGC+AGG + Chr2:81697513-81697532 None:intergenic 40.0%
CAAGTCATAGTCGTAACTGA+CGG - Chr2:81697115-81697134 MsG0280011266.01.T01:intron 40.0%
CAGTTGGAGTATACACGATT+GGG + Chr2:81696843-81696862 None:intergenic 40.0%
CATAGACAACACAGCAAACA+AGG + Chr2:81696010-81696029 None:intergenic 40.0%
CATGTACTGGAGTTGAGAAA+AGG + Chr2:81699429-81699448 None:intergenic 40.0%
CATTTCTGATACAGCAAAGC+AGG - Chr2:81695205-81695224 MsG0280011266.01.T01:three_prime_UTR 40.0%
CTGCCTATTACTATTGACGT+TGG - Chr2:81697511-81697530 MsG0280011266.01.T01:intron 40.0%
CTTATTGAATGGAACAGCTG+AGG - Chr2:81699258-81699277 MsG0280011266.01.T01:CDS 40.0%
GAGATCCACACTTCAACAAA+GGG - Chr2:81696393-81696412 MsG0280011266.01.T01:CDS 40.0%
GCATACATATTCCCTGGTTT+CGG - Chr2:81699086-81699105 MsG0280011266.01.T01:intron 40.0%
GCATTTGTCTGCATCAAAGA+TGG + Chr2:81698313-81698332 None:intergenic 40.0%
GCTGCTAAAGCTTATGAACT+TGG - Chr2:81699382-81699401 MsG0280011266.01.T01:intron 40.0%
GGCCTAGGTTTAATAATGTC+TGG - Chr2:81699107-81699126 MsG0280011266.01.T01:CDS 40.0%
GGCCTTTACTGAAAAAGAGA+GGG - Chr2:81696418-81696437 MsG0280011266.01.T01:intron 40.0%
GGCTTAAGTGTATTGTTTGG+TGG - Chr2:81698156-81698175 MsG0280011266.01.T01:CDS 40.0%
GGTGTTTAAATTATAGGGGG+AGG - Chr2:81697053-81697072 MsG0280011266.01.T01:intron 40.0%
GTAGATGATAATCCGATCTC+TGG - Chr2:81695799-81695818 MsG0280011266.01.T01:intron 40.0%
GTCCCAACGTCAATAGTAAT+AGG + Chr2:81697517-81697536 None:intergenic 40.0%
GTTAATTCACATGGCCTGAT+TGG - Chr2:81696707-81696726 MsG0280011266.01.T01:intron 40.0%
TAAAGCAAAGACGAGCAACT+GGG - Chr2:81697578-81697597 MsG0280011266.01.T01:intron 40.0%
TACATTCGGACTGTGATGTT+GGG + Chr2:81698786-81698805 None:intergenic 40.0%
TAGTGGTAGTTGGACTACTA+AGG - Chr2:81699907-81699926 MsG0280011266.01.T01:intron 40.0%
TCTTGAGGAATAGTTGTTGG+GGG + Chr2:81696470-81696489 None:intergenic 40.0%
TGAGGTCACCTTAAAAAGGT+TGG + Chr2:81694972-81694991 None:intergenic 40.0%
TGGCCTTTACTGAAAAAGAG+AGG - Chr2:81696417-81696436 MsG0280011266.01.T01:CDS 40.0%
TTCTTAGGGAATGGGAATAC+CGG - Chr2:81697277-81697296 MsG0280011266.01.T01:intron 40.0%
TTTCAGGAACACCAATTGAG+GGG + Chr2:81696037-81696056 None:intergenic 40.0%
! AACTTGTTTCAACAAGTGCC+AGG + Chr2:81694942-81694961 None:intergenic 40.0%
! AGGAAATTAGGAAGGTGTAG+TGG - Chr2:81699890-81699909 MsG0280011266.01.T01:intron 40.0%
! GAAGTGAAACACGTTTTGTG+AGG + Chr2:81694990-81695009 None:intergenic 40.0%
! GACATTTTTATGCGTCCACA+GGG - Chr2:81696889-81696908 MsG0280011266.01.T01:intron 40.0%
! GATGTTCCAATAAGCACTGT+TGG + Chr2:81698580-81698599 None:intergenic 40.0%
! GCATCGAGAAGGTTTTTAAC+AGG + Chr2:81698450-81698469 None:intergenic 40.0%
! GGTTTTCAACGACGATATTC+AGG - Chr2:81697836-81697855 MsG0280011266.01.T01:CDS 40.0%
! GTACATTAACAGCATCGAGA+AGG + Chr2:81698461-81698480 None:intergenic 40.0%
! TGCGAGTTCCAACCTTTTTA+AGG - Chr2:81694961-81694980 MsG0280011266.01.T01:three_prime_UTR 40.0%
! TGGCAGTGTTGTTAATGTGA+TGG - Chr2:81695732-81695751 MsG0280011266.01.T01:intron 40.0%
! TTCTGATGTTGGTGAATGGT+GGG + Chr2:81699333-81699352 None:intergenic 40.0%
! TTTCGCCGGTTGAATATAAG+GGG - Chr2:81698951-81698970 MsG0280011266.01.T01:intron 40.0%
! TTTCTGATGTTGGTGAATGG+TGG + Chr2:81699334-81699353 None:intergenic 40.0%
!! ATATTGGTTGGTGGACTCAA+AGG - Chr2:81698356-81698375 MsG0280011266.01.T01:intron 40.0%
!! CAAGCAGATCAAAAGCATTG+TGG + Chr2:81697794-81697813 None:intergenic 40.0%
!! GAGAAAATGGATTACCAGGA+AGG + Chr2:81695283-81695302 None:intergenic 40.0%
!! GGGGGGTGTTTAAATTATAG+GGG - Chr2:81697049-81697068 MsG0280011266.01.T01:intron 40.0%
!! GGGGGTGTTTAAATTATAGG+GGG - Chr2:81697050-81697069 MsG0280011266.01.T01:intron 40.0%
!! GGTGGGTTAGTAAGGAAATT+AGG - Chr2:81699878-81699897 MsG0280011266.01.T01:intron 40.0%
!! GTTGCAGCTTTGAAATTGGT+TGG - Chr2:81697984-81698003 MsG0280011266.01.T01:intron 40.0%
!! TATTGGTTGGTGGACTCAAA+GGG - Chr2:81698357-81698376 MsG0280011266.01.T01:intron 40.0%
!! TGCAGCTTTGAAATTGGTTG+GGG - Chr2:81697986-81698005 MsG0280011266.01.T01:intron 40.0%
!! TTGTATTGGGTGGGTTAGTA+AGG - Chr2:81699870-81699889 MsG0280011266.01.T01:intron 40.0%
!!! ACAGGTTGGTAGCTACTTTT+AGG - Chr2:81698229-81698248 MsG0280011266.01.T01:intron 40.0%
!!! CAGGTTGGTAGCTACTTTTA+GGG - Chr2:81698230-81698249 MsG0280011266.01.T01:intron 40.0%
AAGTGCGTTTACCAAAGAGG+TGG - Chr2:81698609-81698628 MsG0280011266.01.T01:CDS 45.0%
AATTAAAAAGGAGGCCGTGG+TGG - Chr2:81695771-81695790 MsG0280011266.01.T01:intron 45.0%
AGCTTCTTCAGCGGTACATT+CGG + Chr2:81698800-81698819 None:intergenic 45.0%
AGGAATAAGACATACCTCGC+CGG + Chr2:81698048-81698067 None:intergenic 45.0%
AGGATCACTTTGTGACTCCT+TGG - Chr2:81695863-81695882 MsG0280011266.01.T01:CDS 45.0%
AGTCACAAAGTGATCCTCAG+TGG + Chr2:81695860-81695879 None:intergenic 45.0%
AGTTTGGTAAGACCGAGGAT+GGG - Chr2:81694902-81694921 MsG0280011266.01.T01:three_prime_UTR 45.0%
ATTAAACCTAGGCCGAAACC+AGG + Chr2:81699101-81699120 None:intergenic 45.0%
ATTGCATGGGAGATACTAGC+TGG + Chr2:81698686-81698705 None:intergenic 45.0%
ATTGCCATGTATCTCTGCAG+CGG + Chr2:81696539-81696558 None:intergenic 45.0%
CCAACATTTCAAGAAGCCGT+GGG - Chr2:81698410-81698429 MsG0280011266.01.T01:intron 45.0%
CCACGTATAAGCTTCTTCAG+CGG + Chr2:81698809-81698828 None:intergenic 45.0%
CGAGATCCACACTTCAACAA+AGG - Chr2:81696392-81696411 MsG0280011266.01.T01:CDS 45.0%
CTAAAGCAAAGACGAGCAAC+TGG - Chr2:81697577-81697596 MsG0280011266.01.T01:intron 45.0%
CTAGCAACAGAAACACTCCA+AGG + Chr2:81695883-81695902 None:intergenic 45.0%
CTTATTGGAACATCGGGACA+AGG - Chr2:81698586-81698605 MsG0280011266.01.T01:CDS 45.0%
CTTGATATTGGCGTATGTGC+TGG + Chr2:81696514-81696533 None:intergenic 45.0%
GACGAAGTGCGCAAGAATAT+TGG - Chr2:81698340-81698359 MsG0280011266.01.T01:intron 45.0%
GATGATAATCCGATCTCTGG+TGG - Chr2:81695802-81695821 MsG0280011266.01.T01:intron 45.0%
GCAGAGATACATGGCAATGA+TGG - Chr2:81696541-81696560 MsG0280011266.01.T01:CDS 45.0%
GTACATTCGGACTGTGATGT+TGG + Chr2:81698787-81698806 None:intergenic 45.0%
GTCAAAACTCCCACCTTCTT+TGG - Chr2:81696615-81696634 MsG0280011266.01.T01:CDS 45.0%
GTTGCGGAGATCATGATGAT+GGG + Chr2:81695252-81695271 None:intergenic 45.0%
GTTTACCAAAGAGGTGGTTG+AGG - Chr2:81698615-81698634 MsG0280011266.01.T01:intron 45.0%
GTTTGCATTTCTGTCAGGCT+TGG - Chr2:81699649-81699668 MsG0280011266.01.T01:intron 45.0%
TAGTCGTAACTGACGGAGAA+CGG - Chr2:81697122-81697141 MsG0280011266.01.T01:intron 45.0%
TAGTTTGGTAAGACCGAGGA+TGG - Chr2:81694901-81694920 MsG0280011266.01.T01:three_prime_UTR 45.0%
TCCAACATTTCAAGAAGCCG+TGG - Chr2:81698409-81698428 MsG0280011266.01.T01:intron 45.0%
TCCACACTTCAACAAAGGGT+TGG - Chr2:81696397-81696416 MsG0280011266.01.T01:CDS 45.0%
TCTGCAGCGGAACTTGATAT+TGG + Chr2:81696526-81696545 None:intergenic 45.0%
TGAACACCATTTCCCATCCT+CGG + Chr2:81694917-81694936 None:intergenic 45.0%
TGATGTTTACGGCGAGGATA+AGG - Chr2:81695834-81695853 MsG0280011266.01.T01:intron 45.0%
TGGGAAATGGTGTTCAATCC+TGG - Chr2:81694921-81694940 MsG0280011266.01.T01:three_prime_UTR 45.0%
TGGGGTATACATACAGCTCT+CGG + Chr2:81699714-81699733 None:intergenic 45.0%
TTAAACCTAGGCCGAAACCA+GGG + Chr2:81699100-81699119 None:intergenic 45.0%
TTCACCAAATCTTTCGGCTG+TGG + Chr2:81699686-81699705 None:intergenic 45.0%
TTCCTCAAGAAACTCAGGTG+AGG - Chr2:81696480-81696499 MsG0280011266.01.T01:intron 45.0%
TTCCTCACCTGAGTTTCTTG+AGG + Chr2:81696485-81696504 None:intergenic 45.0%
TTCTACGAGGATAAACAGGC+GGG + Chr2:81696954-81696973 None:intergenic 45.0%
TTGCATGGGAGATACTAGCT+GGG + Chr2:81698685-81698704 None:intergenic 45.0%
! AGGAAGTGCGTTTACCAAAG+AGG - Chr2:81698606-81698625 MsG0280011266.01.T01:CDS 45.0%
! CTTGGAGTGTTTCTGTTGCT+AGG - Chr2:81695881-81695900 MsG0280011266.01.T01:CDS 45.0%
! GGACATTTTTATGCGTCCAC+AGG - Chr2:81696888-81696907 MsG0280011266.01.T01:intron 45.0%
! GTGTATTGTTTGGTGGTTGC+AGG - Chr2:81698163-81698182 MsG0280011266.01.T01:CDS 45.0%
! TAGGAAGGTGTAGTGGTAGT+TGG - Chr2:81699897-81699916 MsG0280011266.01.T01:intron 45.0%
! TATTGTTTGGTGGTTGCAGG+CGG - Chr2:81698166-81698185 MsG0280011266.01.T01:CDS 45.0%
! TGCGCAAGAATATTGGTTGG+TGG - Chr2:81698347-81698366 MsG0280011266.01.T01:intron 45.0%
!! CATGGCAATGATGGATCTTC+AGG - Chr2:81696550-81696569 MsG0280011266.01.T01:CDS 45.0%
!! GCAGCTTTGAAATTGGTTGG+GGG - Chr2:81697987-81698006 MsG0280011266.01.T01:intron 45.0%
!! GGAGATCATGATGATGGGTA+TGG + Chr2:81695247-81695266 None:intergenic 45.0%
!!! GTTGGTAGCTACTTTTAGGG+TGG - Chr2:81698233-81698252 MsG0280011266.01.T01:intron 45.0%
AACTGACGGAGAACGGATCT+TGG - Chr2:81697129-81697148 MsG0280011266.01.T01:intron 50.0%
AAGGGGTTATGGACCTTGGA+GGG - Chr2:81695678-81695697 MsG0280011266.01.T01:CDS 50.0%
ACGTTGGGACAAACAACGAG+AGG - Chr2:81697527-81697546 MsG0280011266.01.T01:intron 50.0%
ACTGACGGAGAACGGATCTT+GGG - Chr2:81697130-81697149 MsG0280011266.01.T01:intron 50.0%
ACTTACAGGCAGCAAGAAGC+AGG + Chr2:81699154-81699173 None:intergenic 50.0%
AGAACGGATCTTGGGTCTTG+GGG - Chr2:81697138-81697157 MsG0280011266.01.T01:intron 50.0%
AGAAGCTTATACGTGGACCC+AGG - Chr2:81698813-81698832 MsG0280011266.01.T01:intron 50.0%
AGAGAAGGGGTTATGGACCT+TGG - Chr2:81695674-81695693 MsG0280011266.01.T01:CDS 50.0%
AGATTACAGTCCGGTAAGCC+AGG + Chr2:81697712-81697731 None:intergenic 50.0%
AGGAACACCAATTGAGGGGA+TGG + Chr2:81696033-81696052 None:intergenic 50.0%
AGGGTAGTTTGGTAAGACCG+AGG - Chr2:81694897-81694916 MsG0280011266.01.T01:three_prime_UTR 50.0%
AGGGTTGCTCAGGATTAGGT+GGG - Chr2:81695629-81695648 MsG0280011266.01.T01:CDS 50.0%
AGTTCCGCTGCAGAGATACA+TGG - Chr2:81696532-81696551 MsG0280011266.01.T01:CDS 50.0%
ATATTCCCTGGTTTCGGCCT+AGG - Chr2:81699092-81699111 MsG0280011266.01.T01:intron 50.0%
ATCTTGGGTCTTGGGGATCT+AGG - Chr2:81697145-81697164 MsG0280011266.01.T01:intron 50.0%
CAGGTCGTCATGTACACGAA+TGG + Chr2:81699135-81699154 None:intergenic 50.0%
CCAAATCTTTCGGCTGTGGA+AGG + Chr2:81699682-81699701 None:intergenic 50.0%
CCCACGGCTTCTTGAAATGT+TGG + Chr2:81698413-81698432 None:intergenic 50.0%
CCGCTGAAGAAGCTTATACG+TGG - Chr2:81698806-81698825 MsG0280011266.01.T01:intron 50.0%
CCTTCCACAGCCGAAAGATT+TGG - Chr2:81699679-81699698 MsG0280011266.01.T01:intron 50.0%
GAATGGAACAGCTGAGGCAT+TGG - Chr2:81699264-81699283 MsG0280011266.01.T01:CDS 50.0%
GACGTGCGATCTTTGCAAGT+GGG - Chr2:81698921-81698940 MsG0280011266.01.T01:intron 50.0%
GAGAACGGATCTTGGGTCTT+GGG - Chr2:81697137-81697156 MsG0280011266.01.T01:intron 50.0%
GATAATCCGATCTCTGGTGG+CGG - Chr2:81695805-81695824 MsG0280011266.01.T01:intron 50.0%
GATGCAGACAAATGCCCCAT+TGG - Chr2:81698318-81698337 MsG0280011266.01.T01:intron 50.0%
GCCAACCCTTTGTTGAAGTG+TGG + Chr2:81696401-81696420 None:intergenic 50.0%
GGTTGCGGAGATCATGATGA+TGG + Chr2:81695253-81695272 None:intergenic 50.0%
GTAAGACCGAGGATGGGAAA+TGG - Chr2:81694908-81694927 MsG0280011266.01.T01:three_prime_UTR 50.0%
GTATACTCCAACTGTTGGCG+AGG - Chr2:81696849-81696868 MsG0280011266.01.T01:intron 50.0%
GTATCACCGGTAGCTTCTGT+AGG + Chr2:81699738-81699757 None:intergenic 50.0%
GTCTATGCCATCCCCTCAAT+TGG - Chr2:81696023-81696042 MsG0280011266.01.T01:CDS 50.0%
TAGGGAATGGGAATACCGGT+GGG - Chr2:81697281-81697300 MsG0280011266.01.T01:intron 50.0%
TATTACGAGCAGGGTTGCTC+AGG - Chr2:81695619-81695638 MsG0280011266.01.T01:CDS 50.0%
TCTTGCGCACTTCGTCCAAT+GGG + Chr2:81698336-81698355 None:intergenic 50.0%
TCTTGGGGATCTAGGTTGTC+AGG - Chr2:81697153-81697172 MsG0280011266.01.T01:CDS 50.0%
TTAGGGAATGGGAATACCGG+TGG - Chr2:81697280-81697299 MsG0280011266.01.T01:intron 50.0%
TTCTTGCGCACTTCGTCCAA+TGG + Chr2:81698337-81698356 None:intergenic 50.0%
TTTGTTCCAGGGAACGGCAT+CGG - Chr2:81697944-81697963 MsG0280011266.01.T01:intron 50.0%
! ATTGTTTGGTGGTTGCAGGC+GGG - Chr2:81698167-81698186 MsG0280011266.01.T01:CDS 50.0%
! GATTACCAGGAAGGTGCATC+TGG + Chr2:81695274-81695293 None:intergenic 50.0%
!! AAGGGGAAAGTGTTTGTGCC+TGG - Chr2:81698968-81698987 MsG0280011266.01.T01:intron 50.0%
!! ACATCTGTGGTGGACAGAGA+AGG - Chr2:81695659-81695678 MsG0280011266.01.T01:CDS 50.0%
!! ATCTGTGGTGGACAGAGAAG+GGG - Chr2:81695661-81695680 MsG0280011266.01.T01:CDS 50.0%
!! CATCTGTGGTGGACAGAGAA+GGG - Chr2:81695660-81695679 MsG0280011266.01.T01:CDS 50.0%
ACCGGTAGCTTCTGTAGGCT+GGG + Chr2:81699733-81699752 None:intergenic 55.0%
AGGGATGCACACTACTTGCG+TGG - Chr2:81696437-81696456 MsG0280011266.01.T01:intron 55.0%
CAAAGAGGTGGTTGAGGCGA+TGG - Chr2:81698621-81698640 MsG0280011266.01.T01:intron 55.0%
CAGGGTTGCTCAGGATTAGG+TGG - Chr2:81695628-81695647 MsG0280011266.01.T01:CDS 55.0%
CATCGCCTCAACCACCTCTT+TGG + Chr2:81698623-81698642 None:intergenic 55.0%
CGAGGCTTGCCAGAAATACG+GGG - Chr2:81696867-81696886 MsG0280011266.01.T01:intron 55.0%
CTTGCGCACTTCGTCCAATG+GGG + Chr2:81698335-81698354 None:intergenic 55.0%
GAAGGGGTTATGGACCTTGG+AGG - Chr2:81695677-81695696 MsG0280011266.01.T01:CDS 55.0%
GACATACACGTCACCCTCCA+AGG + Chr2:81695694-81695713 None:intergenic 55.0%
GAGCAGGGTTGCTCAGGATT+AGG - Chr2:81695625-81695644 MsG0280011266.01.T01:CDS 55.0%
GCGAGGCTTGCCAGAAATAC+GGG - Chr2:81696866-81696885 MsG0280011266.01.T01:intron 55.0%
GGACGTGCGATCTTTGCAAG+TGG - Chr2:81698920-81698939 MsG0280011266.01.T01:intron 55.0%
GGAGAACGGATCTTGGGTCT+TGG - Chr2:81697136-81697155 MsG0280011266.01.T01:intron 55.0%
GGCGAGGCTTGCCAGAAATA+CGG - Chr2:81696865-81696884 MsG0280011266.01.T01:intron 55.0%
GGCGATGGCCTCTATTAACG+AGG - Chr2:81698636-81698655 MsG0280011266.01.T01:intron 55.0%
GGCGGTCCTCGTGATGTTTA+CGG - Chr2:81695823-81695842 MsG0280011266.01.T01:intron 55.0%
GGGAGTGGTAACATCTGTGG+TGG - Chr2:81695649-81695668 MsG0280011266.01.T01:CDS 55.0%
GGTGGACAGAGAAGGGGTTA+TGG - Chr2:81695667-81695686 MsG0280011266.01.T01:CDS 55.0%
GGTGGGAGTGGTAACATCTG+TGG - Chr2:81695646-81695665 MsG0280011266.01.T01:CDS 55.0%
GGTTCGTGTTCATGAGCCCA+CGG + Chr2:81698429-81698448 None:intergenic 55.0%
TCCTCGCCGTAAACATCACG+AGG + Chr2:81695832-81695851 None:intergenic 55.0%
TCCTCGTGATGTTTACGGCG+AGG - Chr2:81695828-81695847 MsG0280011266.01.T01:intron 55.0%
TGCTCAGGATTAGGTGGGAG+TGG - Chr2:81695634-81695653 MsG0280011266.01.T01:CDS 55.0%
! AAGTGGGAGCCCATTTTCGC+CGG - Chr2:81698937-81698956 MsG0280011266.01.T01:intron 55.0%
! CAGGAAGGTGCATCTGGTTG+CGG + Chr2:81695268-81695287 None:intergenic 55.0%
!! ACGGCATCGGTTGTTCTTGC+TGG - Chr2:81697957-81697976 MsG0280011266.01.T01:intron 55.0%
!! GAAAGTGTTTGTGCCTGGCC+AGG - Chr2:81698973-81698992 MsG0280011266.01.T01:intron 55.0%
CACCGGTAGCTTCTGTAGGC+TGG + Chr2:81699734-81699753 None:intergenic 60.0%
CCCCAGCCTACAGAAGCTAC+CGG - Chr2:81699729-81699748 MsG0280011266.01.T01:CDS 60.0%
CCGGTAGCTTCTGTAGGCTG+GGG + Chr2:81699732-81699751 None:intergenic 60.0%
CGCAACCAGATGCACCTTCC+TGG - Chr2:81695266-81695285 MsG0280011266.01.T01:CDS 60.0%
GAACAACCGATGCCGTTCCC+TGG + Chr2:81697953-81697972 None:intergenic 60.0%
GCAAAGACGAGCAACTGGGC+AGG - Chr2:81697582-81697601 MsG0280011266.01.T01:intron 60.0%
TCTTGGGCTTAGACCTGGCC+AGG + Chr2:81698989-81699008 None:intergenic 60.0%
TGGCAAGCCTCGCCAACAGT+TGG + Chr2:81696859-81696878 None:intergenic 60.0%
TTTCGGCTGTGGAAGGCGAG+TGG + Chr2:81699675-81699694 None:intergenic 60.0%
!! CTTATTCCTTGGTGCCGGCG+AGG - Chr2:81698031-81698050 MsG0280011266.01.T01:intron 60.0%
CGAGGACCGCCACCAGAGAT+CGG + Chr2:81695814-81695833 None:intergenic 65.0%
CGGCGAGGATAAGGCCACTG+AGG - Chr2:81695843-81695862 MsG0280011266.01.T01:CDS 65.0%
GACATACCTCGCCGGCACCA+AGG + Chr2:81698040-81698059 None:intergenic 65.0%
TGGTGGTTGCAGGCGGGCAC+TGG - Chr2:81698173-81698192 MsG0280011266.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 81694891 81700113 81694891 ID=MsG0280011266.01;Name=MsG0280011266.01
Chr2 mRNA 81694891 81700113 81694891 ID=MsG0280011266.01.T01;Parent=MsG0280011266.01;Name=MsG0280011266.01.T01;_AED=0.27;_eAED=0.27;_QI=29|0.76|0.72|1|0.82|0.83|18|359|686
Chr2 exon 81694891 81695338 81694891 ID=MsG0280011266.01.T01:exon:12152;Parent=MsG0280011266.01.T01
Chr2 exon 81695601 81695729 81695601 ID=MsG0280011266.01.T01:exon:12151;Parent=MsG0280011266.01.T01
Chr2 exon 81695837 81695927 81695837 ID=MsG0280011266.01.T01:exon:12150;Parent=MsG0280011266.01.T01
Chr2 exon 81696010 81696084 81696010 ID=MsG0280011266.01.T01:exon:12149;Parent=MsG0280011266.01.T01
Chr2 exon 81696170 81696247 81696170 ID=MsG0280011266.01.T01:exon:12148;Parent=MsG0280011266.01.T01
Chr2 exon 81696347 81696436 81696347 ID=MsG0280011266.01.T01:exon:12147;Parent=MsG0280011266.01.T01
Chr2 exon 81696528 81696700 81696528 ID=MsG0280011266.01.T01:exon:12146;Parent=MsG0280011266.01.T01
Chr2 exon 81696768 81696819 81696768 ID=MsG0280011266.01.T01:exon:12145;Parent=MsG0280011266.01.T01
Chr2 exon 81696952 81697050 81696952 ID=MsG0280011266.01.T01:exon:12144;Parent=MsG0280011266.01.T01
Chr2 exon 81697147 81697230 81697147 ID=MsG0280011266.01.T01:exon:12143;Parent=MsG0280011266.01.T01
Chr2 exon 81697329 81697496 81697329 ID=MsG0280011266.01.T01:exon:12142;Parent=MsG0280011266.01.T01
Chr2 exon 81697655 81697720 81697655 ID=MsG0280011266.01.T01:exon:12141;Parent=MsG0280011266.01.T01
Chr2 exon 81697830 81697935 81697830 ID=MsG0280011266.01.T01:exon:12140;Parent=MsG0280011266.01.T01
Chr2 exon 81698069 81698220 81698069 ID=MsG0280011266.01.T01:exon:12139;Parent=MsG0280011266.01.T01
Chr2 exon 81698508 81698628 81698508 ID=MsG0280011266.01.T01:exon:12138;Parent=MsG0280011266.01.T01
Chr2 exon 81699102 81699363 81699102 ID=MsG0280011266.01.T01:exon:12137;Parent=MsG0280011266.01.T01
Chr2 exon 81699717 81699879 81699717 ID=MsG0280011266.01.T01:exon:12136;Parent=MsG0280011266.01.T01
Chr2 exon 81700022 81700113 81700022 ID=MsG0280011266.01.T01:exon:12135;Parent=MsG0280011266.01.T01
Chr2 five_prime_UTR 81700085 81700113 81700085 ID=MsG0280011266.01.T01:five_prime_utr;Parent=MsG0280011266.01.T01
Chr2 CDS 81700022 81700084 81700022 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81699717 81699879 81699717 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81699102 81699363 81699102 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81698508 81698628 81698508 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81698069 81698220 81698069 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81697830 81697935 81697830 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81697655 81697720 81697655 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81697329 81697496 81697329 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81697147 81697230 81697147 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81696952 81697050 81696952 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81696768 81696819 81696768 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81696528 81696700 81696528 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81696347 81696436 81696347 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81696170 81696247 81696170 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81696010 81696084 81696010 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81695837 81695927 81695837 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81695601 81695729 81695601 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 CDS 81695250 81695338 81695250 ID=MsG0280011266.01.T01:cds;Parent=MsG0280011266.01.T01
Chr2 three_prime_UTR 81694891 81695249 81694891 ID=MsG0280011266.01.T01:three_prime_utr;Parent=MsG0280011266.01.T01
Gene Sequence

>MsG0280011266.01.T01

ATGGGAAATGGTGTTCAATCCTGGCACTTGTTGAAACAAGTTGCGAGTTCCAACCTTTTTAAGAGAAGAGAGAGAGTGACAGAGAAAGAAGTGAAAAAAACCTTAACAATCTCTCTCTCTATATTATATATAACGTTCTCTCTCATTTCTGATACAGCAAAGCAGGACTCTTTCTCGCACTTCCATACCCATCATCATGATCTCCGCAACCAGATGCACCTTCCTGGATTAGGTGGGAGTGGTAACATCTGTGGTGGACAGAGAAGGGGTTATGGACCTTGGAGGGTGACGTGTATGTCACCAATCAATGATAGAAATGGCAGTGTTGTTAATGTGATGGAGACACCTTTGAAAGAAATTAAAAAGGAGGCCGTGGTGGAAGATGTAGATGATAATCCGATCTCTGGTGGCGGTCCTCGTGATGTTTACGGCGAGGATAAGGCCACTGAGGATCACTTTGTGACTCCTTGGAGTGTTTCTGTTGCTAGTGGTTATACATTGTTGCGAGATCCACACTTCAACAAAGGGTTGGCCTTTACTGAAAAAGAGAGGGATGCACACTACTTGCGTGGTCTTCTTCCCCCAACAACTATTCCTCAAGAAACTCAGGAAAGAAATGAACGTCTGTTTTACAAACTTCTCATTGATCACGTTGAAGAATTGCTCCCAATCGTGTATACTCCAACTGTTGGCGAGGCTTGCCAGAAATACGGGGACATTTTTATGCGTCCACAGGGTCTTTATATAAGTTTGAAAGAGAAGGGGAGGATTCAAGAAGTACTGAGAAATTGGCCTGAGAAGAACATTCAAGTCATAGTCGTAACTGACGGAGAACGGATCTTGGGTCTTGGGGATCTAGGTTGTCAGGGAATGGGAATACCGGTGGGAAAACTTTCTTTATATACTGCACTAGGAGGAGTTCGTCCTTCAGCTTGCCTGCCTATTACTATTGACGTTGGGACAAACAACGAGAGGCTGCTCAATGATGAATTATATATCGGGCTAAAGCAAAGACGAGCAACTGGGCAGGAATATTCTGAACTTATGCACGAATTTATGACTGCAGTCAAGCAAACTTACGGTGAAAAAGTCTTAATTCAGTTTGAAGACTTCGCGAACCACAATGCTTTTGATCTGCTTGAAAAATATAGATCAACACATCTGGTTTTCAACGACGATATTCAGGGAACGGCATCGGTTGTTCTTGCTGGACTAGTTGCAGCTTTGAAATTGGTTGGGGGAAACTTAGCTGACCACAAATTCTTATTCCTTGGTGCCGGCGAGGCGGGCACTGGAATTGCAGAGCTCATTGCACTTGAAACATCTAAACAGGTTGAAACTACCATCTTTGATGCAGACAAATGCCCCATTGGACGAAGTGCGCAAGAATATTGGTTGGTGGACTCAAAGGGATTGATTGTCAGTTCCCGTAAAGAATCACTCCAACATTTCAAGAAGCCGTGGGCTCATGAACACGAACCTGTTAAAAACCTTCTCGATGCTGTTAATAAAATTAAGCCAACAGTGCTTATTGGAACATCGGGACAAGGAAGTGCGTTTACCAAAGAGGTGGTTGAGGCGATGGCCTCTATTAACGAGAAACCTATTATTCTCTCTCTTTCGAACCCAACATCACAGTCCGAATGTACCGCTGAAGAAGCTTATACGTGGACCCAGGGACGTGCGATCTTTGCAAGTGGGAGCCCATTTTCGCCGGTTGAATATAAGGGGAAAGTGTTTGTGCCTGGCCAGGCAAATAATGCATACATATTCCCTGGTTTCGGCCTAGGTTTAATAATGTCTGGGACCATTCGTGTACATGACGACCTGCTTCTTGCTGCCTCTGAGGCATTGGCTGAACAAGTATCAGAAGAGAACTTTGAGAAGGGTTTGATATTCCCACCATTCACCAACATCAGAAAGATTTCAGCTCACATAGCTGCCAAAGTTGCTGCTAAAGCTTATGAACTTGGCTTGGCCACTCGCCTTCCACAGCCGAAAGATTTGGTGAAGTTTGCCGAGAGCTGTATGTATACCCCAGCCTACAGAAGCTACCGGTGA
Protein sequence

>MsG0280011266.01.T01

MGNGVQSWHLLKQVASSNLFKRRERVTEKEVKKTLTISLSILYITFSLISDTAKQDSFSHFHTHHHDLRNQMHLPGLGGSGNICGGQRRGYGPWRVTCMSPINDRNGSVVNVMETPLKEIKKEAVVEDVDDNPISGGGPRDVYGEDKATEDHFVTPWSVSVASGYTLLRDPHFNKGLAFTEKERDAHYLRGLLPPTTIPQETQERNERLFYKLLIDHVEELLPIVYTPTVGEACQKYGDIFMRPQGLYISLKEKGRIQEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNERLLNDELYIGLKQRRATGQEYSELMHEFMTAVKQTYGEKVLIQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLVAALKLVGGNLADHKFLFLGAGEAGTGIAELIALETSKQVETTIFDADKCPIGRSAQEYWLVDSKGLIVSSRKESLQHFKKPWAHEHEPVKNLLDAVNKIKPTVLIGTSGQGSAFTKEVVEAMASINEKPIILSLSNPTSQSECTAEEAYTWTQGRAIFASGSPFSPVEYKGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAEQVSEENFEKGLIFPPFTNIRKISAHIAAKVAAKAYELGLATRLPQPKDLVKFAESCMYTPAYRSYR*