Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012794.01.T01 | AES69501.2 | 93.925 | 214 | 13 | 0 | 1 | 214 | 15 | 228 | 1.97E-143 | 418 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012794.01.T01 | Q9FKK2 | 52.326 | 172 | 75 | 4 | 1 | 165 | 13 | 184 | 1.36E-45 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012794.01.T01 | G7IWT8 | 93.925 | 214 | 13 | 0 | 1 | 214 | 15 | 228 | 9.41e-144 | 418 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0380013711.01 | MsG0380012794.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012794.01.T01 | MTR_3g030770 | 93.925 | 214 | 13 | 0 | 1 | 214 | 15 | 228 | 2.39e-147 | 418 |
| MsG0380012794.01.T01 | MTR_1g108510 | 92.523 | 214 | 16 | 0 | 1 | 214 | 15 | 228 | 6.77e-146 | 414 |
| MsG0380012794.01.T01 | MTR_2g093190 | 83.178 | 214 | 36 | 0 | 1 | 214 | 15 | 228 | 2.63e-129 | 372 |
| MsG0380012794.01.T01 | MTR_1g108580 | 80.841 | 214 | 41 | 0 | 1 | 214 | 15 | 228 | 1.27e-125 | 363 |
| MsG0380012794.01.T01 | MTR_1g105920 | 73.913 | 207 | 44 | 2 | 1 | 199 | 15 | 219 | 1.19e-101 | 302 |
| MsG0380012794.01.T01 | MTR_8g043650 | 69.585 | 217 | 56 | 2 | 1 | 209 | 15 | 229 | 1.59e-99 | 296 |
| MsG0380012794.01.T01 | MTR_1g105910 | 66.063 | 221 | 57 | 3 | 1 | 213 | 15 | 225 | 5.92e-96 | 288 |
| MsG0380012794.01.T01 | MTR_2g030740 | 69.565 | 207 | 53 | 2 | 1 | 199 | 15 | 219 | 1.17e-95 | 287 |
| MsG0380012794.01.T01 | MTR_1g012570 | 68.599 | 207 | 55 | 2 | 1 | 199 | 15 | 219 | 4.09e-95 | 285 |
| MsG0380012794.01.T01 | MTR_3g052920 | 68.116 | 207 | 56 | 2 | 1 | 199 | 15 | 219 | 5.28e-93 | 280 |
| MsG0380012794.01.T01 | MTR_1g105905 | 64.220 | 218 | 60 | 3 | 4 | 213 | 1 | 208 | 9.70e-91 | 273 |
| MsG0380012794.01.T01 | MTR_0121s0080 | 62.780 | 223 | 65 | 3 | 1 | 215 | 15 | 227 | 3.22e-87 | 265 |
| MsG0380012794.01.T01 | MTR_1g075600 | 61.538 | 221 | 67 | 3 | 1 | 213 | 15 | 225 | 1.18e-85 | 261 |
| MsG0380012794.01.T01 | MTR_1g077360 | 59.729 | 221 | 71 | 3 | 1 | 213 | 15 | 225 | 1.06e-83 | 256 |
| MsG0380012794.01.T01 | MTR_3g052870 | 65.829 | 199 | 55 | 3 | 1 | 199 | 15 | 200 | 1.86e-81 | 250 |
| MsG0380012794.01.T01 | MTR_5g045560 | 58.371 | 221 | 74 | 3 | 1 | 213 | 15 | 225 | 3.52e-80 | 247 |
| MsG0380012794.01.T01 | MTR_5g053390 | 58.824 | 221 | 73 | 3 | 1 | 213 | 15 | 225 | 9.42e-80 | 246 |
| MsG0380012794.01.T01 | MTR_5g055100 | 58.036 | 224 | 76 | 3 | 1 | 216 | 15 | 228 | 8.73e-79 | 244 |
| MsG0380012794.01.T01 | MTR_2g085280 | 57.466 | 221 | 76 | 3 | 1 | 213 | 15 | 225 | 7.50e-78 | 241 |
| MsG0380012794.01.T01 | MTR_2g085250 | 58.216 | 213 | 79 | 2 | 1 | 205 | 15 | 225 | 1.22e-77 | 241 |
| MsG0380012794.01.T01 | MTR_1g106070 | 69.643 | 168 | 43 | 1 | 1 | 160 | 15 | 182 | 2.99e-76 | 235 |
| MsG0380012794.01.T01 | MTR_7g062350 | 60.849 | 212 | 65 | 3 | 10 | 213 | 36 | 237 | 6.02e-76 | 237 |
| MsG0380012794.01.T01 | MTR_0121s0100 | 83.898 | 118 | 19 | 0 | 1 | 118 | 15 | 132 | 4.27e-64 | 202 |
| MsG0380012794.01.T01 | MTR_3g080940 | 52.071 | 169 | 79 | 1 | 1 | 169 | 15 | 181 | 3.06e-53 | 177 |
| MsG0380012794.01.T01 | MTR_3g030560 | 41.356 | 295 | 77 | 11 | 218 | 422 | 1 | 289 | 5.74e-52 | 179 |
| MsG0380012794.01.T01 | MTR_1g075570 | 55.618 | 178 | 57 | 2 | 4 | 173 | 1 | 164 | 8.38e-50 | 166 |
| MsG0380012794.01.T01 | MTR_3g030780 | 66.949 | 118 | 39 | 0 | 1 | 118 | 15 | 132 | 1.87e-49 | 164 |
| MsG0380012794.01.T01 | MTR_3g029800 | 42.254 | 284 | 79 | 12 | 218 | 422 | 1 | 278 | 4.70e-46 | 162 |
| MsG0380012794.01.T01 | MTR_7g005990 | 38.376 | 271 | 71 | 9 | 218 | 398 | 1 | 265 | 6.29e-40 | 146 |
| MsG0380012794.01.T01 | MTR_3g030050 | 35.061 | 328 | 90 | 9 | 217 | 422 | 12 | 338 | 6.40e-38 | 142 |
| MsG0380012794.01.T01 | MTR_3g047980 | 38.745 | 271 | 88 | 8 | 221 | 421 | 30 | 292 | 9.78e-38 | 140 |
| MsG0380012794.01.T01 | MTR_3g067910 | 62.136 | 103 | 39 | 0 | 7 | 109 | 2 | 104 | 6.93e-37 | 130 |
| MsG0380012794.01.T01 | MTR_3g058460 | 35.986 | 289 | 95 | 10 | 218 | 422 | 12 | 294 | 1.61e-35 | 135 |
| MsG0380012794.01.T01 | MTR_3g029650 | 38.849 | 278 | 91 | 11 | 220 | 422 | 4 | 277 | 1.50e-34 | 136 |
| MsG0380012794.01.T01 | MTR_3g029650 | 34.983 | 303 | 93 | 13 | 215 | 422 | 365 | 658 | 1.02e-24 | 107 |
| MsG0380012794.01.T01 | MTR_3g029640 | 36.934 | 287 | 92 | 11 | 218 | 422 | 1 | 280 | 1.02e-30 | 121 |
| MsG0380012794.01.T01 | MTR_3g029870 | 37.984 | 258 | 92 | 12 | 219 | 422 | 3 | 246 | 3.57e-30 | 119 |
| MsG0380012794.01.T01 | MTR_3g030480 | 38.043 | 276 | 92 | 10 | 220 | 422 | 4 | 273 | 5.51e-30 | 119 |
| MsG0380012794.01.T01 | MTR_3g030440 | 37.319 | 276 | 94 | 9 | 220 | 422 | 5 | 274 | 6.07e-30 | 119 |
| MsG0380012794.01.T01 | MTR_8g086290 | 38.710 | 155 | 85 | 2 | 1 | 152 | 18 | 165 | 6.20e-30 | 114 |
| MsG0380012794.01.T01 | MTR_3g029620 | 35.593 | 295 | 91 | 12 | 220 | 422 | 2 | 289 | 2.16e-28 | 115 |
| MsG0380012794.01.T01 | MTR_3g030355 | 36.364 | 308 | 85 | 17 | 217 | 422 | 2 | 300 | 5.66e-28 | 114 |
| MsG0380012794.01.T01 | MTR_7g028448 | 39.216 | 153 | 81 | 3 | 8 | 160 | 25 | 165 | 1.35e-27 | 108 |
| MsG0380012794.01.T01 | MTR_4g036915 | 39.216 | 153 | 81 | 3 | 8 | 160 | 25 | 165 | 1.35e-27 | 108 |
| MsG0380012794.01.T01 | MTR_1g108500 | 59.794 | 97 | 18 | 1 | 8 | 104 | 110 | 185 | 2.93e-27 | 111 |
| MsG0380012794.01.T01 | MTR_6g009100 | 55.039 | 129 | 43 | 6 | 218 | 341 | 1 | 119 | 4.11e-27 | 105 |
| MsG0380012794.01.T01 | MTR_2g105290 | 35.484 | 155 | 90 | 2 | 1 | 152 | 18 | 165 | 5.87e-27 | 106 |
| MsG0380012794.01.T01 | MTR_3g030380 | 35.484 | 279 | 97 | 10 | 220 | 422 | 4 | 275 | 1.15e-26 | 110 |
| MsG0380012794.01.T01 | MTR_6g018370 | 37.344 | 241 | 110 | 10 | 218 | 422 | 1 | 236 | 2.09e-26 | 107 |
| MsG0380012794.01.T01 | MTR_6g018400 | 43.151 | 146 | 65 | 2 | 219 | 346 | 3 | 148 | 4.91e-26 | 108 |
| MsG0380012794.01.T01 | MTR_3g029840 | 31.615 | 291 | 99 | 10 | 219 | 422 | 3 | 280 | 1.31e-25 | 107 |
| MsG0380012794.01.T01 | MTR_6g018390 | 45.033 | 151 | 59 | 5 | 218 | 346 | 2 | 150 | 4.73e-25 | 105 |
| MsG0380012794.01.T01 | MTR_6g018390 | 53.165 | 79 | 35 | 2 | 345 | 422 | 209 | 286 | 2.60e-15 | 77.4 |
| MsG0380012794.01.T01 | MTR_1g016570 | 34.909 | 275 | 107 | 13 | 211 | 422 | 10 | 275 | 9.97e-25 | 104 |
| MsG0380012794.01.T01 | MTR_1g049170 | 49.231 | 130 | 56 | 4 | 217 | 339 | 2 | 128 | 4.60e-24 | 103 |
| MsG0380012794.01.T01 | MTR_3g067875 | 78.571 | 56 | 12 | 0 | 4 | 59 | 1 | 56 | 6.44e-24 | 94.7 |
| MsG0380012794.01.T01 | MTR_4g127140 | 34.177 | 158 | 84 | 4 | 8 | 152 | 25 | 175 | 2.53e-23 | 96.7 |
| MsG0380012794.01.T01 | MTR_3g029820 | 33.730 | 252 | 120 | 9 | 213 | 422 | 1 | 247 | 9.50e-23 | 98.6 |
| MsG0380012794.01.T01 | MTR_2g047180 | 47.222 | 144 | 50 | 7 | 218 | 338 | 1 | 141 | 1.45e-22 | 99.0 |
| MsG0380012794.01.T01 | MTR_2g047180 | 55.263 | 76 | 26 | 4 | 355 | 422 | 215 | 290 | 1.19e-13 | 72.4 |
| MsG0380012794.01.T01 | MTR_3g067915 | 47.872 | 94 | 49 | 0 | 19 | 112 | 3 | 96 | 1.44e-21 | 89.0 |
| MsG0380012794.01.T01 | MTR_3g030080 | 39.216 | 153 | 70 | 2 | 220 | 350 | 6 | 157 | 8.17e-20 | 90.9 |
| MsG0380012794.01.T01 | MTR_3g030080 | 50.704 | 71 | 30 | 3 | 355 | 422 | 219 | 287 | 1.49e-11 | 65.9 |
| MsG0380012794.01.T01 | MTR_6g018360 | 40.411 | 146 | 66 | 4 | 219 | 346 | 3 | 145 | 5.19e-19 | 89.0 |
| MsG0380012794.01.T01 | MTR_6g018360 | 52.941 | 85 | 32 | 2 | 346 | 422 | 210 | 294 | 9.38e-16 | 79.0 |
| MsG0380012794.01.T01 | MTR_3g092000 | 43.885 | 139 | 57 | 8 | 217 | 339 | 3 | 136 | 7.19e-19 | 88.6 |
| MsG0380012794.01.T01 | MTR_3g092000 | 46.087 | 115 | 47 | 5 | 313 | 422 | 212 | 316 | 1.37e-15 | 78.6 |
| MsG0380012794.01.T01 | MTR_1g063160 | 43.396 | 106 | 55 | 3 | 1 | 104 | 8 | 110 | 1.24e-18 | 83.6 |
| MsG0380012794.01.T01 | MTR_3g067870 | 63.492 | 63 | 23 | 0 | 2 | 64 | 83 | 145 | 1.65e-18 | 82.4 |
| MsG0380012794.01.T01 | MTR_4g131030 | 41.818 | 110 | 48 | 4 | 11 | 104 | 18 | 127 | 3.00e-18 | 83.6 |
| MsG0380012794.01.T01 | MTR_1g054265 | 50.704 | 71 | 35 | 0 | 1 | 71 | 8 | 78 | 3.27e-17 | 79.3 |
| MsG0380012794.01.T01 | MTR_6g027040 | 61.972 | 71 | 24 | 2 | 355 | 422 | 227 | 297 | 4.37e-17 | 82.8 |
| MsG0380012794.01.T01 | MTR_6g027040 | 35.948 | 153 | 71 | 5 | 219 | 346 | 3 | 153 | 1.11e-14 | 75.5 |
| MsG0380012794.01.T01 | MTR_1g047550 | 64.151 | 53 | 19 | 0 | 11 | 63 | 18 | 70 | 4.85e-17 | 79.0 |
| MsG0380012794.01.T01 | MTR_8g079502 | 64.151 | 53 | 19 | 0 | 11 | 63 | 18 | 70 | 5.06e-17 | 79.0 |
| MsG0380012794.01.T01 | MTR_1g026850 | 42.537 | 134 | 54 | 7 | 220 | 338 | 5 | 130 | 8.20e-17 | 82.0 |
| MsG0380012794.01.T01 | MTR_6g027100 | 61.972 | 71 | 24 | 2 | 355 | 422 | 227 | 297 | 8.32e-17 | 82.4 |
| MsG0380012794.01.T01 | MTR_6g027100 | 35.948 | 153 | 71 | 6 | 219 | 346 | 3 | 153 | 1.25e-14 | 75.9 |
| MsG0380012794.01.T01 | MTR_8g051580 | 64.151 | 53 | 19 | 0 | 11 | 63 | 18 | 70 | 9.00e-17 | 78.2 |
| MsG0380012794.01.T01 | MTR_4g094632 | 41.304 | 92 | 52 | 1 | 4 | 95 | 11 | 100 | 1.31e-16 | 77.4 |
| MsG0380012794.01.T01 | MTR_4g094638 | 40.206 | 97 | 57 | 1 | 1 | 96 | 8 | 104 | 1.36e-16 | 77.8 |
| MsG0380012794.01.T01 | MTR_3g030360 | 38.365 | 159 | 66 | 6 | 221 | 352 | 5 | 158 | 2.55e-16 | 80.1 |
| MsG0380012794.01.T01 | MTR_8g046350 | 42.056 | 107 | 53 | 4 | 11 | 115 | 18 | 117 | 2.86e-16 | 76.3 |
| MsG0380012794.01.T01 | MTR_4g102530 | 48.529 | 68 | 35 | 0 | 1 | 68 | 8 | 75 | 6.52e-16 | 76.6 |
| MsG0380012794.01.T01 | MTR_4g093970 | 31.707 | 164 | 80 | 3 | 1 | 146 | 34 | 183 | 7.01e-16 | 77.0 |
| MsG0380012794.01.T01 | MTR_1g007260 | 40.000 | 145 | 56 | 7 | 218 | 339 | 19 | 155 | 8.11e-16 | 79.0 |
| MsG0380012794.01.T01 | MTR_1g007260 | 46.512 | 86 | 40 | 4 | 343 | 422 | 224 | 309 | 1.57e-11 | 65.9 |
| MsG0380012794.01.T01 | MTR_3g029950 | 40.559 | 143 | 57 | 8 | 219 | 339 | 3 | 139 | 8.77e-16 | 79.0 |
| MsG0380012794.01.T01 | MTR_1g101970 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 2.98e-15 | 74.3 |
| MsG0380012794.01.T01 | MTR_8g033220 | 50.000 | 64 | 32 | 0 | 1 | 64 | 8 | 71 | 4.60e-15 | 74.3 |
| MsG0380012794.01.T01 | MTR_8g033220 | 50.000 | 64 | 32 | 0 | 1 | 64 | 8 | 71 | 5.19e-15 | 74.3 |
| MsG0380012794.01.T01 | MTR_3g005530 | 48.387 | 62 | 32 | 0 | 1 | 62 | 8 | 69 | 5.74e-15 | 74.3 |
| MsG0380012794.01.T01 | MTR_7g075870 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 6.74e-15 | 73.6 |
| MsG0380012794.01.T01 | MTR_6g018315 | 53.947 | 76 | 27 | 2 | 355 | 422 | 204 | 279 | 9.07e-15 | 75.9 |
| MsG0380012794.01.T01 | MTR_6g018315 | 39.552 | 134 | 58 | 4 | 232 | 346 | 1 | 130 | 1.04e-12 | 69.7 |
| MsG0380012794.01.T01 | MTR_8g022970 | 34.483 | 145 | 70 | 4 | 13 | 145 | 36 | 167 | 1.07e-14 | 72.4 |
| MsG0380012794.01.T01 | MTR_8g033270 | 47.945 | 73 | 36 | 1 | 1 | 71 | 8 | 80 | 1.33e-14 | 73.6 |
| MsG0380012794.01.T01 | MTR_3g029920 | 37.736 | 159 | 71 | 6 | 213 | 346 | 1 | 156 | 1.35e-14 | 75.5 |
| MsG0380012794.01.T01 | MTR_3g029920 | 48.750 | 80 | 29 | 4 | 350 | 422 | 218 | 292 | 1.12e-11 | 66.2 |
| MsG0380012794.01.T01 | MTR_3g102570 | 43.750 | 96 | 51 | 3 | 1 | 95 | 8 | 101 | 1.93e-14 | 74.3 |
| MsG0380012794.01.T01 | MTR_5g066180 | 48.387 | 62 | 32 | 0 | 1 | 62 | 8 | 69 | 1.94e-14 | 72.8 |
| MsG0380012794.01.T01 | MTR_6g464720 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 2.73e-14 | 72.8 |
| MsG0380012794.01.T01 | MTR_4g109830 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 2.96e-14 | 72.4 |
| MsG0380012794.01.T01 | MTR_3g091990 | 54.795 | 73 | 27 | 2 | 356 | 422 | 231 | 303 | 3.75e-14 | 74.3 |
| MsG0380012794.01.T01 | MTR_3g091990 | 38.028 | 142 | 70 | 6 | 220 | 345 | 6 | 145 | 3.39e-13 | 71.2 |
| MsG0380012794.01.T01 | MTR_5g032150 | 32.667 | 150 | 70 | 7 | 1 | 143 | 8 | 133 | 4.21e-14 | 71.6 |
| MsG0380012794.01.T01 | MTR_2g461710 | 60.000 | 50 | 20 | 0 | 1 | 50 | 8 | 57 | 4.99e-14 | 67.0 |
| MsG0380012794.01.T01 | MTR_5g042230 | 54.795 | 73 | 28 | 2 | 355 | 422 | 42 | 114 | 5.60e-14 | 70.9 |
| MsG0380012794.01.T01 | MTR_5g032520 | 39.604 | 101 | 49 | 4 | 1 | 94 | 8 | 103 | 7.48e-14 | 70.9 |
| MsG0380012794.01.T01 | MTR_3g452380 | 36.752 | 117 | 71 | 3 | 1 | 115 | 23 | 138 | 8.18e-14 | 71.2 |
| MsG0380012794.01.T01 | MTR_7g075870 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 9.73e-14 | 70.5 |
| MsG0380012794.01.T01 | MTR_1g053070 | 44.000 | 75 | 42 | 0 | 1 | 75 | 8 | 82 | 1.23e-13 | 70.9 |
| MsG0380012794.01.T01 | MTR_2g017865 | 33.628 | 113 | 73 | 2 | 1 | 112 | 23 | 134 | 1.90e-13 | 70.5 |
| MsG0380012794.01.T01 | MTR_5g031000 | 45.161 | 62 | 34 | 0 | 1 | 62 | 8 | 69 | 2.08e-13 | 69.7 |
| MsG0380012794.01.T01 | MTR_5g031000 | 45.161 | 62 | 34 | 0 | 1 | 62 | 8 | 69 | 2.24e-13 | 69.7 |
| MsG0380012794.01.T01 | MTR_2g009890 | 45.161 | 62 | 34 | 0 | 1 | 62 | 8 | 69 | 2.46e-13 | 70.5 |
| MsG0380012794.01.T01 | MTR_8g035995 | 52.941 | 68 | 28 | 1 | 359 | 422 | 11 | 78 | 3.57e-13 | 67.4 |
| MsG0380012794.01.T01 | MTR_0003s0590 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 4.05e-13 | 69.3 |
| MsG0380012794.01.T01 | MTR_6g015975 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 7.71e-13 | 68.6 |
| MsG0380012794.01.T01 | MTR_7g016600 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 8.60e-13 | 68.2 |
| MsG0380012794.01.T01 | MTR_8g066260 | 47.619 | 63 | 32 | 1 | 1 | 62 | 8 | 70 | 1.12e-12 | 67.8 |
| MsG0380012794.01.T01 | MTR_1g041615 | 37.736 | 106 | 57 | 2 | 6 | 110 | 17 | 114 | 1.13e-12 | 65.5 |
| MsG0380012794.01.T01 | MTR_8g087860 | 45.161 | 62 | 34 | 0 | 1 | 62 | 24 | 85 | 1.40e-12 | 67.8 |
| MsG0380012794.01.T01 | MTR_1g007250 | 47.674 | 86 | 40 | 3 | 342 | 422 | 3 | 88 | 1.57e-12 | 65.9 |
| MsG0380012794.01.T01 | MTR_5g046870 | 54.000 | 50 | 23 | 0 | 1 | 50 | 8 | 57 | 2.41e-12 | 63.9 |
| MsG0380012794.01.T01 | MTR_7g016630 | 44.444 | 63 | 34 | 1 | 1 | 62 | 8 | 70 | 4.54e-12 | 66.2 |
| MsG0380012794.01.T01 | MTR_5g046790 | 52.941 | 51 | 24 | 0 | 1 | 51 | 8 | 58 | 4.75e-12 | 65.5 |
| MsG0380012794.01.T01 | MTR_3g037710 | 48.750 | 80 | 24 | 1 | 360 | 422 | 101 | 180 | 5.96e-12 | 66.2 |
| MsG0380012794.01.T01 | MTR_3g084980 | 58.000 | 50 | 21 | 0 | 1 | 50 | 8 | 57 | 1.35e-11 | 64.7 |
| MsG0380012794.01.T01 | MTR_3g113030 | 45.312 | 64 | 33 | 1 | 1 | 62 | 8 | 71 | 1.47e-11 | 64.3 |
| MsG0380012794.01.T01 | MTR_3g109930 | 29.878 | 164 | 99 | 3 | 13 | 169 | 20 | 174 | 1.86e-11 | 62.8 |
| MsG0380012794.01.T01 | MTR_4g109810 | 54.000 | 50 | 23 | 0 | 1 | 50 | 8 | 57 | 2.02e-11 | 64.3 |
| MsG0380012794.01.T01 | MTR_8g097090 | 56.000 | 50 | 22 | 0 | 1 | 50 | 8 | 57 | 2.60e-11 | 63.9 |
| MsG0380012794.01.T01 | MTR_4g036050 | 29.609 | 179 | 103 | 7 | 1 | 172 | 8 | 170 | 3.41e-11 | 62.8 |
| MsG0380012794.01.T01 | MTR_1g029670 | 45.000 | 60 | 32 | 1 | 1 | 60 | 8 | 66 | 4.02e-11 | 62.0 |
| MsG0380012794.01.T01 | MTR_7g075850 | 56.863 | 51 | 22 | 0 | 1 | 51 | 8 | 58 | 5.78e-11 | 62.8 |
| MsG0380012794.01.T01 | MTR_3g088615 | 42.188 | 64 | 35 | 1 | 1 | 62 | 8 | 71 | 6.86e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012794.01.T01 | AT5G60440 | 52.326 | 172 | 75 | 4 | 1 | 165 | 13 | 184 | 1.39e-46 | 162 |
| MsG0380012794.01.T01 | AT2G24840 | 45.806 | 155 | 73 | 4 | 1 | 149 | 69 | 218 | 1.60e-33 | 127 |
| MsG0380012794.01.T01 | AT1G01530 | 42.515 | 167 | 90 | 3 | 3 | 165 | 15 | 179 | 4.21e-33 | 125 |
| MsG0380012794.01.T01 | AT4G36590 | 44.099 | 161 | 80 | 4 | 1 | 153 | 13 | 171 | 1.86e-30 | 118 |
| MsG0380012794.01.T01 | AT1G65360 | 41.071 | 168 | 92 | 4 | 3 | 165 | 15 | 180 | 1.03e-29 | 115 |
| MsG0380012794.01.T01 | AT2G34440 | 34.722 | 144 | 92 | 2 | 1 | 144 | 8 | 149 | 9.26e-22 | 92.0 |
| MsG0380012794.01.T01 | AT3G66656 | 38.017 | 121 | 71 | 1 | 1 | 117 | 8 | 128 | 9.95e-19 | 84.0 |
| MsG0380012794.01.T01 | AT2G45660 | 52.381 | 63 | 30 | 0 | 1 | 63 | 8 | 70 | 1.99e-17 | 79.7 |
| MsG0380012794.01.T01 | AT1G72350 | 31.492 | 181 | 84 | 6 | 1 | 174 | 49 | 196 | 4.81e-17 | 80.1 |
| MsG0380012794.01.T01 | AT2G45660 | 52.381 | 63 | 30 | 0 | 1 | 63 | 8 | 70 | 1.23e-16 | 79.0 |
| MsG0380012794.01.T01 | AT4G09960 | 36.154 | 130 | 73 | 5 | 1 | 123 | 8 | 134 | 5.83e-16 | 77.0 |
| MsG0380012794.01.T01 | AT4G09960 | 36.154 | 130 | 73 | 5 | 1 | 123 | 8 | 134 | 7.28e-16 | 77.0 |
| MsG0380012794.01.T01 | AT4G09960 | 36.154 | 130 | 73 | 5 | 1 | 123 | 9 | 135 | 7.40e-16 | 77.0 |
| MsG0380012794.01.T01 | AT4G09960 | 36.154 | 130 | 73 | 5 | 1 | 123 | 18 | 144 | 8.06e-16 | 77.0 |
| MsG0380012794.01.T01 | AT4G09960 | 36.154 | 130 | 73 | 5 | 1 | 123 | 34 | 160 | 8.65e-16 | 77.4 |
| MsG0380012794.01.T01 | AT3G04100 | 31.034 | 145 | 84 | 4 | 1 | 135 | 20 | 158 | 9.85e-16 | 76.3 |
| MsG0380012794.01.T01 | AT4G09960 | 37.391 | 115 | 66 | 4 | 1 | 112 | 103 | 214 | 1.74e-15 | 77.4 |
| MsG0380012794.01.T01 | AT2G45650 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 2.55e-15 | 75.9 |
| MsG0380012794.01.T01 | AT4G22950 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 2.70e-15 | 73.9 |
| MsG0380012794.01.T01 | AT4G24540 | 33.803 | 142 | 77 | 4 | 1 | 142 | 8 | 132 | 5.82e-15 | 74.3 |
| MsG0380012794.01.T01 | AT5G51870 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 9.15e-15 | 72.4 |
| MsG0380012794.01.T01 | AT4G22950 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 1.15e-14 | 73.2 |
| MsG0380012794.01.T01 | AT4G22950 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 1.15e-14 | 73.2 |
| MsG0380012794.01.T01 | AT5G51870 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 1.21e-14 | 72.8 |
| MsG0380012794.01.T01 | AT2G22540 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 1.33e-14 | 73.6 |
| MsG0380012794.01.T01 | AT2G22540 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 1.33e-14 | 73.6 |
| MsG0380012794.01.T01 | AT5G51870 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 1.49e-14 | 72.8 |
| MsG0380012794.01.T01 | AT3G57230 | 43.548 | 62 | 35 | 0 | 1 | 62 | 8 | 69 | 1.78e-14 | 70.9 |
| MsG0380012794.01.T01 | AT5G51870 | 51.613 | 62 | 30 | 0 | 1 | 62 | 18 | 79 | 1.90e-14 | 72.8 |
| MsG0380012794.01.T01 | AT5G51870 | 51.613 | 62 | 30 | 0 | 1 | 62 | 31 | 92 | 1.94e-14 | 72.0 |
| MsG0380012794.01.T01 | AT4G37940 | 45.161 | 62 | 34 | 0 | 1 | 62 | 8 | 69 | 2.49e-14 | 72.4 |
| MsG0380012794.01.T01 | AT4G37940 | 45.161 | 62 | 34 | 0 | 1 | 62 | 8 | 69 | 2.77e-14 | 72.0 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 3.33e-14 | 70.5 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 3.33e-14 | 70.5 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 3.33e-14 | 70.5 |
| MsG0380012794.01.T01 | AT4G37940 | 45.161 | 62 | 34 | 0 | 1 | 62 | 8 | 69 | 3.97e-14 | 70.9 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 5.66e-14 | 69.7 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 5.66e-14 | 69.7 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 5.66e-14 | 69.7 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 5.66e-14 | 69.7 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 5.66e-14 | 69.7 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 8.92e-14 | 70.1 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 8.92e-14 | 70.1 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 9.49e-14 | 70.5 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 9.49e-14 | 70.5 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 9.49e-14 | 70.5 |
| MsG0380012794.01.T01 | AT5G10140 | 52.381 | 63 | 29 | 1 | 1 | 62 | 8 | 70 | 9.61e-14 | 69.3 |
| MsG0380012794.01.T01 | AT3G57230 | 43.548 | 62 | 35 | 0 | 1 | 62 | 8 | 69 | 1.04e-13 | 70.9 |
| MsG0380012794.01.T01 | AT3G57230 | 43.548 | 62 | 35 | 0 | 1 | 62 | 8 | 69 | 1.04e-13 | 70.9 |
| MsG0380012794.01.T01 | AT4G18960 | 37.234 | 94 | 49 | 1 | 1 | 94 | 24 | 107 | 1.22e-13 | 70.9 |
| MsG0380012794.01.T01 | AT5G51860 | 48.387 | 62 | 32 | 0 | 1 | 62 | 8 | 69 | 1.52e-13 | 69.7 |
| MsG0380012794.01.T01 | AT5G62165 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 1.58e-13 | 67.0 |
| MsG0380012794.01.T01 | AT5G10140 | 52.381 | 63 | 29 | 1 | 1 | 62 | 8 | 70 | 1.59e-13 | 69.3 |
| MsG0380012794.01.T01 | AT5G10140 | 52.381 | 63 | 29 | 1 | 1 | 62 | 8 | 70 | 1.77e-13 | 68.9 |
| MsG0380012794.01.T01 | AT5G10140 | 52.381 | 63 | 29 | 1 | 1 | 62 | 8 | 70 | 1.83e-13 | 69.3 |
| MsG0380012794.01.T01 | AT5G51860 | 48.387 | 62 | 32 | 0 | 1 | 62 | 8 | 69 | 2.11e-13 | 69.3 |
| MsG0380012794.01.T01 | AT3G30260 | 47.619 | 63 | 32 | 1 | 1 | 62 | 8 | 70 | 2.62e-13 | 70.1 |
| MsG0380012794.01.T01 | AT5G13790 | 39.130 | 92 | 47 | 1 | 1 | 92 | 8 | 90 | 2.91e-13 | 70.1 |
| MsG0380012794.01.T01 | AT4G11880 | 53.704 | 54 | 25 | 0 | 1 | 54 | 8 | 61 | 3.20e-13 | 68.2 |
| MsG0380012794.01.T01 | AT4G11880 | 53.704 | 54 | 25 | 0 | 1 | 54 | 8 | 61 | 3.20e-13 | 68.2 |
| MsG0380012794.01.T01 | AT5G13790 | 48.387 | 62 | 32 | 0 | 1 | 62 | 8 | 69 | 3.23e-13 | 70.1 |
| MsG0380012794.01.T01 | AT1G28460 | 29.193 | 161 | 105 | 5 | 1 | 155 | 14 | 171 | 3.59e-13 | 68.2 |
| MsG0380012794.01.T01 | AT3G57390 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 3.98e-13 | 68.9 |
| MsG0380012794.01.T01 | AT4G11880 | 56.863 | 51 | 22 | 0 | 1 | 51 | 8 | 58 | 5.65e-13 | 68.6 |
| MsG0380012794.01.T01 | AT4G11880 | 56.863 | 51 | 22 | 0 | 1 | 51 | 8 | 58 | 5.65e-13 | 68.6 |
| MsG0380012794.01.T01 | AT3G58780 | 33.898 | 118 | 66 | 3 | 1 | 112 | 23 | 134 | 5.71e-13 | 68.9 |
| MsG0380012794.01.T01 | AT2G42830 | 45.161 | 62 | 34 | 0 | 1 | 62 | 23 | 84 | 5.76e-13 | 68.9 |
| MsG0380012794.01.T01 | AT2G42830 | 45.161 | 62 | 34 | 0 | 1 | 62 | 23 | 84 | 5.93e-13 | 68.9 |
| MsG0380012794.01.T01 | AT1G69120 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 5.98e-13 | 68.6 |
| MsG0380012794.01.T01 | AT3G58780 | 33.898 | 118 | 66 | 3 | 1 | 112 | 29 | 140 | 6.24e-13 | 68.9 |
| MsG0380012794.01.T01 | AT5G60910 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 7.31e-13 | 68.6 |
| MsG0380012794.01.T01 | AT1G26310 | 47.619 | 63 | 32 | 1 | 1 | 62 | 8 | 70 | 7.78e-13 | 68.6 |
| MsG0380012794.01.T01 | AT2G14210 | 42.857 | 63 | 35 | 1 | 1 | 62 | 8 | 70 | 8.49e-13 | 68.2 |
| MsG0380012794.01.T01 | AT3G58780 | 33.898 | 118 | 66 | 3 | 1 | 112 | 23 | 134 | 8.77e-13 | 68.9 |
| MsG0380012794.01.T01 | AT2G22540 | 58.000 | 50 | 21 | 0 | 1 | 50 | 8 | 57 | 9.20e-13 | 68.2 |
| MsG0380012794.01.T01 | AT3G57390 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 1.03e-12 | 68.2 |
| MsG0380012794.01.T01 | AT2G14210 | 42.857 | 63 | 35 | 1 | 1 | 62 | 8 | 70 | 1.07e-12 | 67.8 |
| MsG0380012794.01.T01 | AT1G69120 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 1.29e-12 | 68.2 |
| MsG0380012794.01.T01 | AT5G15800 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 1.42e-12 | 67.8 |
| MsG0380012794.01.T01 | AT3G61120 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 1.66e-12 | 67.4 |
| MsG0380012794.01.T01 | AT5G15800 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 2.42e-12 | 67.4 |
| MsG0380012794.01.T01 | AT3G54340 | 44.776 | 67 | 35 | 1 | 1 | 65 | 8 | 74 | 2.87e-12 | 66.6 |
| MsG0380012794.01.T01 | AT3G02310 | 47.619 | 63 | 32 | 1 | 1 | 62 | 8 | 70 | 4.78e-12 | 65.1 |
| MsG0380012794.01.T01 | AT2G03710 | 46.875 | 64 | 32 | 1 | 1 | 62 | 8 | 71 | 6.61e-12 | 64.7 |
| MsG0380012794.01.T01 | AT1G29962 | 25.466 | 161 | 114 | 2 | 1 | 155 | 14 | 174 | 7.57e-12 | 64.3 |
| MsG0380012794.01.T01 | AT5G65050 | 47.619 | 63 | 32 | 1 | 1 | 62 | 8 | 70 | 1.02e-11 | 63.9 |
| MsG0380012794.01.T01 | AT1G77950 | 45.455 | 66 | 35 | 1 | 1 | 65 | 8 | 73 | 1.32e-11 | 65.1 |
| MsG0380012794.01.T01 | AT1G77950 | 45.455 | 66 | 35 | 1 | 1 | 65 | 8 | 73 | 1.32e-11 | 65.1 |
| MsG0380012794.01.T01 | AT1G77950 | 45.455 | 66 | 35 | 1 | 1 | 65 | 8 | 73 | 1.32e-11 | 65.1 |
| MsG0380012794.01.T01 | AT1G77950 | 45.455 | 66 | 35 | 1 | 1 | 65 | 8 | 73 | 1.32e-11 | 65.1 |
| MsG0380012794.01.T01 | AT1G24260 | 56.000 | 50 | 22 | 0 | 1 | 50 | 8 | 57 | 1.51e-11 | 64.7 |
| MsG0380012794.01.T01 | AT1G24260 | 56.000 | 50 | 22 | 0 | 1 | 50 | 8 | 57 | 1.52e-11 | 64.7 |
| MsG0380012794.01.T01 | AT1G24260 | 56.000 | 50 | 22 | 0 | 1 | 50 | 8 | 57 | 1.61e-11 | 64.7 |
| MsG0380012794.01.T01 | AT1G77980 | 48.485 | 66 | 33 | 1 | 1 | 65 | 8 | 73 | 1.98e-11 | 65.5 |
| MsG0380012794.01.T01 | AT1G71692 | 45.312 | 64 | 34 | 1 | 1 | 63 | 8 | 71 | 2.29e-11 | 63.5 |
| MsG0380012794.01.T01 | AT5G20240 | 43.284 | 67 | 36 | 1 | 1 | 65 | 8 | 74 | 2.69e-11 | 62.0 |
| MsG0380012794.01.T01 | AT3G02310 | 47.619 | 63 | 32 | 1 | 1 | 62 | 8 | 70 | 2.79e-11 | 63.9 |
| MsG0380012794.01.T01 | AT1G22130 | 36.782 | 87 | 54 | 1 | 1 | 86 | 8 | 94 | 3.04e-11 | 64.7 |
| MsG0380012794.01.T01 | AT3G58780 | 33.628 | 113 | 66 | 3 | 1 | 112 | 23 | 127 | 3.09e-11 | 63.5 |
| MsG0380012794.01.T01 | AT1G17310 | 48.387 | 62 | 30 | 1 | 11 | 72 | 64 | 123 | 4.38e-11 | 62.8 |
| MsG0380012794.01.T01 | AT2G03710 | 46.875 | 64 | 32 | 1 | 1 | 62 | 8 | 71 | 5.34e-11 | 63.2 |
| MsG0380012794.01.T01 | AT1G17310 | 48.387 | 62 | 30 | 1 | 11 | 72 | 75 | 134 | 5.73e-11 | 62.8 |
| MsG0380012794.01.T01 | AT2G03710 | 46.875 | 64 | 32 | 1 | 1 | 62 | 8 | 71 | 5.87e-11 | 63.2 |
Find 93 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCAGATTGTTGAGTATT+TGG | 0.166839 | 3:+24680849 | None:intergenic |
| GATGTTGTGTTTGTATAGTT+TGG | 0.246120 | 3:+24679764 | None:intergenic |
| TGGTGGGCTTGTCCGGTTAA+TGG | 0.250384 | 3:-24681011 | MsG0380012794.01.T01:CDS |
| ATTAATTGCAGAAGCTCTTT+TGG | 0.267760 | 3:+24679900 | None:intergenic |
| TTGCAGCCTCATTTGCTTGA+TGG | 0.267791 | 3:-24680789 | MsG0380012794.01.T01:CDS |
| TCAACTTGAATTATTCAAAA+AGG | 0.268977 | 3:-24680976 | MsG0380012794.01.T01:CDS |
| TAAAAGTGGGTGCCAGAATT+TGG | 0.276752 | 3:+24679650 | None:intergenic |
| TGTTGTTGGTTTGGTGTTGT+AGG | 0.293277 | 3:+24679726 | None:intergenic |
| TCCGGTTAATGGAATGAATA+AGG | 0.314669 | 3:-24681000 | MsG0380012794.01.T01:CDS |
| TCACCATGGCTTCAATAATA+TGG | 0.324358 | 3:-24680754 | MsG0380012794.01.T01:CDS |
| ATGTTGTGTTTGTATAGTTT+GGG | 0.360834 | 3:+24679765 | None:intergenic |
| GCTTTGAGAAAGTCACTTGC+AGG | 0.373101 | 3:+24681345 | None:intergenic |
| CTCATCGCCAATCTTCTTCT+CGG | 0.375394 | 3:+24681070 | None:intergenic |
| TCCTTATTCATTCCATTAAC+CGG | 0.377037 | 3:+24680999 | None:intergenic |
| CCTCCGTTTCCTTGAGCAAA+TGG | 0.380041 | 3:+24681042 | None:intergenic |
| TCACAACAACATTCATTCCT+TGG | 0.382059 | 3:-24679790 | MsG0380012794.01.T01:CDS |
| CGGTGGCGACATTAAATTCC+TGG | 0.390702 | 3:-24679436 | MsG0380012794.01.T01:CDS |
| GTCTATGACCGTATGAAGAT+TGG | 0.395944 | 3:+24681214 | None:intergenic |
| ATGTTGTTGTGACGGAAGTT+TGG | 0.407163 | 3:+24679801 | None:intergenic |
| GACTCAAATCAACAACATAA+TGG | 0.407196 | 3:-24681096 | MsG0380012794.01.T01:CDS |
| TGGAGGATTTGTTGTTGGTT+TGG | 0.420160 | 3:+24679717 | None:intergenic |
| GGCGGTGGAGGATTTGTTGT+TGG | 0.421889 | 3:+24679712 | None:intergenic |
| AGTGAGCTTTGCACCCTTTG+TGG | 0.424656 | 3:-24681296 | MsG0380012794.01.T01:CDS |
| CCGATGGTAAAACCAAATTC+TGG | 0.431404 | 3:-24679662 | MsG0380012794.01.T01:CDS |
| CGCCCTTGGTTGATCAGAAT+CGG | 0.440040 | 3:-24679693 | MsG0380012794.01.T01:CDS |
| CACAACAACATTCATTCCTT+GGG | 0.440114 | 3:-24679789 | MsG0380012794.01.T01:CDS |
| AACAAATCCTCCACCGCCCT+TGG | 0.450874 | 3:-24679707 | MsG0380012794.01.T01:CDS |
| TCTATGACCGTATGAAGATT+GGG | 0.472924 | 3:+24681215 | None:intergenic |
| AGATTACTTCTTTGCAATCT+CGG | 0.473212 | 3:-24679537 | MsG0380012794.01.T01:CDS |
| GTTGAGTATTTGGCTGATGA+TGG | 0.473248 | 3:+24680859 | None:intergenic |
| ATGGATGCCGAGAAGAAGAT+TGG | 0.480508 | 3:-24681077 | MsG0380012794.01.T01:CDS |
| TGAGGCTGCAATTGCAACAT+AGG | 0.486801 | 3:+24680801 | None:intergenic |
| CTGAGACCAATCTGCTGCCA+TGG | 0.487239 | 3:+24679926 | None:intergenic |
| GAACCATTTGCTCAAGGAAA+CGG | 0.490715 | 3:-24681045 | MsG0380012794.01.T01:CDS |
| AGCAGCATCTGCACCACAAA+GGG | 0.492573 | 3:+24681283 | None:intergenic |
| TGATCAACCAAGGGCGGTGG+AGG | 0.494789 | 3:+24679700 | None:intergenic |
| TTCTGATCAACCAAGGGCGG+TGG | 0.500115 | 3:+24679697 | None:intergenic |
| ACCACATGTACGCTCAAGTC+CGG | 0.514627 | 3:+24679474 | None:intergenic |
| TTTGTATAGTTTGGGGCCCA+AGG | 0.515610 | 3:+24679773 | None:intergenic |
| CAACTCTCTGTCTACAATCT+CGG | 0.523500 | 3:-24679582 | MsG0380012794.01.T01:CDS |
| TTCTTTCAGTGAAGAATCCA+TGG | 0.524230 | 3:-24679943 | MsG0380012794.01.T01:intron |
| AAGAATCCATGGCAGCAGAT+TGG | 0.531114 | 3:-24679932 | MsG0380012794.01.T01:CDS |
| GGACATGTGATATACAGAAC+TGG | 0.539006 | 3:-24679516 | MsG0380012794.01.T01:CDS |
| AAACGTTCATGAGGTAAAAG+TGG | 0.544964 | 3:+24679636 | None:intergenic |
| ACACCATATTATTGAAGCCA+TGG | 0.549763 | 3:+24680751 | None:intergenic |
| ACGGTGGTGATGATGATGTA+AGG | 0.559222 | 3:-24679368 | MsG0380012794.01.T01:CDS |
| TTAATGTCGCCACCGATGAA+CGG | 0.559774 | 3:+24679444 | None:intergenic |
| ATTGATCCATCAAGCAAATG+AGG | 0.560013 | 3:+24680783 | None:intergenic |
| TGTTGGTTTGGTGTTGTAGG+TGG | 0.560226 | 3:+24679729 | None:intergenic |
| TGGTCACCCCAATCTTCATA+CGG | 0.566894 | 3:-24681222 | MsG0380012794.01.T01:CDS |
| CGAGATTGTAGACAGAGAGT+TGG | 0.575838 | 3:+24679583 | None:intergenic |
| GTGGTGGCTGAGCCGTTCAT+CGG | 0.579910 | 3:-24679456 | MsG0380012794.01.T01:CDS |
| CTCGTTGTATTCTCACCTAG+TGG | 0.580084 | 3:-24681260 | MsG0380012794.01.T01:CDS |
| CGGCACCATGCAACTCATTG+AGG | 0.589770 | 3:-24681159 | MsG0380012794.01.T01:CDS |
| AGATCGCCACGACGGACAGA+CGG | 0.593979 | 3:+24679830 | None:intergenic |
| ATGAAGATTGGGGTGACCAA+AGG | 0.594093 | 3:+24681226 | None:intergenic |
| TTCGTTCCGTCTGTCCGTCG+TGG | 0.598939 | 3:-24679836 | MsG0380012794.01.T01:CDS |
| AGCATTGAGTTCACGAACGT+TGG | 0.603238 | 3:+24681124 | None:intergenic |
| TGTATTCTCACCTAGTGGAA+AGG | 0.611194 | 3:-24681255 | MsG0380012794.01.T01:CDS |
| GTTGATAGATATATAAGTAA+CGG | 0.611934 | 3:-24679387 | MsG0380012794.01.T01:CDS |
| ACTGGTCGTACTGTGATGAT+CGG | 0.615640 | 3:-24679498 | MsG0380012794.01.T01:CDS |
| AAATTCCTGGTCGAGAGTGA+AGG | 0.616078 | 3:-24679423 | MsG0380012794.01.T01:CDS |
| GTGGTACAAGAGAAAGATAG+TGG | 0.616578 | 3:+24681192 | None:intergenic |
| AACGTTCATGAGGTAAAAGT+GGG | 0.617117 | 3:+24679637 | None:intergenic |
| TGAGCTGAACCATTTGCTCA+AGG | 0.619764 | 3:-24681051 | MsG0380012794.01.T01:CDS |
| TGTTGTGTTTGTATAGTTTG+GGG | 0.620188 | 3:+24679766 | None:intergenic |
| AAGGAAAATACCTTTCCACT+AGG | 0.624124 | 3:+24681245 | None:intergenic |
| TATCACCTTCACTCTCGACC+AGG | 0.625505 | 3:+24679418 | None:intergenic |
| ACTTTCTCAAAGCGTCGTAG+CGG | 0.625617 | 3:-24681335 | MsG0380012794.01.T01:CDS |
| GTCCGATTCTGATCAACCAA+GGG | 0.627089 | 3:+24679691 | None:intergenic |
| GAGCAGCATCTGCACCACAA+AGG | 0.629318 | 3:+24681282 | None:intergenic |
| GTTGTGACGGAAGTTTGGAA+TGG | 0.631837 | 3:+24679806 | None:intergenic |
| GATAGATATATAAGTAACGG+TGG | 0.636068 | 3:-24679384 | MsG0380012794.01.T01:CDS |
| GTTCACGAACGTTGGCATTG+CGG | 0.638735 | 3:+24681132 | None:intergenic |
| TCAAGCACACGACGGAGTGG+AGG | 0.639124 | 3:+24679612 | None:intergenic |
| ATATTATTGAAGCCATGGTG+AGG | 0.642989 | 3:+24680756 | None:intergenic |
| GTGGCTGAGCCGTTCATCGG+TGG | 0.643768 | 3:-24679453 | MsG0380012794.01.T01:CDS |
| GGTCCGATTCTGATCAACCA+AGG | 0.648433 | 3:+24679690 | None:intergenic |
| AGGAATGAATGTTGTTGTGA+CGG | 0.648497 | 3:+24679793 | None:intergenic |
| ACCGGACTTGAGCGTACATG+TGG | 0.648522 | 3:-24679475 | MsG0380012794.01.T01:CDS |
| AAGTCAAGCACACGACGGAG+TGG | 0.650413 | 3:+24679609 | None:intergenic |
| CGATTCTGATCAACCAAGGG+CGG | 0.657372 | 3:+24679694 | None:intergenic |
| GTGAGCCTCAATGAGTTGCA+TGG | 0.660003 | 3:+24681154 | None:intergenic |
| GGACTTGAGCGTACATGTGG+TGG | 0.670193 | 3:-24679472 | MsG0380012794.01.T01:CDS |
| CCATTTGCTCAAGGAAACGG+AGG | 0.672367 | 3:-24681042 | MsG0380012794.01.T01:CDS |
| AGTGGAGGTAAACGTTCATG+AGG | 0.676456 | 3:+24679627 | None:intergenic |
| TCGTACTGTGATGATCGGAC+CGG | 0.678023 | 3:-24679493 | MsG0380012794.01.T01:CDS |
| AGAATCGGACCAGATTCCGA+TGG | 0.684355 | 3:-24679678 | MsG0380012794.01.T01:CDS |
| GGAATGGAAGATCGCCACGA+CGG | 0.704344 | 3:+24679822 | None:intergenic |
| CTATGACCGTATGAAGATTG+GGG | 0.706113 | 3:+24681216 | None:intergenic |
| CTTGTACCACCACAAAACAA+CGG | 0.721002 | 3:-24681179 | MsG0380012794.01.T01:CDS |
| GGATCAATGATGCCTCACCA+TGG | 0.734402 | 3:-24680768 | MsG0380012794.01.T01:CDS |
| GGTTGAAGTCAAGCACACGA+CGG | 0.746629 | 3:+24679604 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAACTTGAATTATTCAAAA+AGG | - | Chr3:24679724-24679743 | MsG0380012794.01.T01:CDS | 20.0% |
| !!! | ATTTTTATCTCCTTTAATCA+AGG | - | Chr3:24680132-24680151 | MsG0380012794.01.T01:intron | 20.0% |
| !!! | GTTGATAGATATATAAGTAA+CGG | - | Chr3:24681313-24681332 | MsG0380012794.01.T01:CDS | 20.0% |
| ! | AAAGAAGTGAAAGAGAAATT+AGG | + | Chr3:24680743-24680762 | None:intergenic | 25.0% |
| ! | AAATCAGACAGTAAATTCAA+TGG | + | Chr3:24680318-24680337 | None:intergenic | 25.0% |
| ! | AAGAAGTGAAAGAGAAATTA+GGG | + | Chr3:24680742-24680761 | None:intergenic | 25.0% |
| ! | ATGTTGTGTTTGTATAGTTT+GGG | + | Chr3:24680938-24680957 | None:intergenic | 25.0% |
| ! | ATTTCAGATTGTTGAGTATT+TGG | + | Chr3:24679854-24679873 | None:intergenic | 25.0% |
| ! | TAAAATTTCCATTCTCCAAA+AGG | - | Chr3:24680560-24680579 | MsG0380012794.01.T01:intron | 25.0% |
| ! | TAAATTAGGCACAAACTTAA+AGG | + | Chr3:24680032-24680051 | None:intergenic | 25.0% |
| ! | TAACTCTAAGCTTAGTTATA+GGG | + | Chr3:24680495-24680514 | None:intergenic | 25.0% |
| ! | TCACCAACTACTAATATAAT+AGG | + | Chr3:24680361-24680380 | None:intergenic | 25.0% |
| ! | TGAATTATTCAAAAAGGCTT+TGG | - | Chr3:24679730-24679749 | MsG0380012794.01.T01:CDS | 25.0% |
| ! | TTAAAATCAAACACAGTGAA+TGG | - | Chr3:24680273-24680292 | MsG0380012794.01.T01:intron | 25.0% |
| !! | AAGCTTAGATTTAGTTCAAA+AGG | - | Chr3:24680527-24680546 | MsG0380012794.01.T01:intron | 25.0% |
| !! | AGAAGAAAAGTCAAACATTT+TGG | + | Chr3:24680165-24680184 | None:intergenic | 25.0% |
| !! | ATAACCCATATTCATTTTCA+TGG | - | Chr3:24680591-24680610 | MsG0380012794.01.T01:intron | 25.0% |
| !! | TAACCCATATTCATTTTCAT+GGG | - | Chr3:24680592-24680611 | MsG0380012794.01.T01:intron | 25.0% |
| !!! | GGATTTTGAAAAAAATGTGA+TGG | + | Chr3:24679881-24679900 | None:intergenic | 25.0% |
| !!! | TTTTGGAGAATGGAAATTTT+AGG | + | Chr3:24680561-24680580 | None:intergenic | 25.0% |
| AAGCTTAGTTATAGGGAAAA+TGG | + | Chr3:24680488-24680507 | None:intergenic | 30.0% | |
| AGATTACTTCTTTGCAATCT+CGG | - | Chr3:24681163-24681182 | MsG0380012794.01.T01:CDS | 30.0% | |
| ATAGGGAAAATGGATGTATT+TGG | + | Chr3:24680478-24680497 | None:intergenic | 30.0% | |
| CAAACAGCGCATTAAAATAA+CGG | + | Chr3:24680673-24680692 | None:intergenic | 30.0% | |
| CATCCCATGAAAATGAATAT+GGG | + | Chr3:24680598-24680617 | None:intergenic | 30.0% | |
| CCAACTACTAATATAATAGG+TGG | + | Chr3:24680358-24680377 | None:intergenic | 30.0% | |
| CCACCTATTATATTAGTAGT+TGG | - | Chr3:24680355-24680374 | MsG0380012794.01.T01:intron | 30.0% | |
| CTAACTCTAAGCTTAGTTAT+AGG | + | Chr3:24680496-24680515 | None:intergenic | 30.0% | |
| CTTATTTATTCCATAGTCTC+TGG | + | Chr3:24680002-24680021 | None:intergenic | 30.0% | |
| GACTCAAATCAACAACATAA+TGG | - | Chr3:24679604-24679623 | MsG0380012794.01.T01:CDS | 30.0% | |
| GATAGATATATAAGTAACGG+TGG | - | Chr3:24681316-24681335 | MsG0380012794.01.T01:CDS | 30.0% | |
| GATGTTGTGTTTGTATAGTT+TGG | + | Chr3:24680939-24680958 | None:intergenic | 30.0% | |
| TCATCCCATGAAAATGAATA+TGG | + | Chr3:24680599-24680618 | None:intergenic | 30.0% | |
| TCCTTATTCATTCCATTAAC+CGG | + | Chr3:24679704-24679723 | None:intergenic | 30.0% | |
| TGAAAGAGAAATTAGGGTTA+GGG | + | Chr3:24680736-24680755 | None:intergenic | 30.0% | |
| TGGTAGTTATCCTTGATTAA+AGG | + | Chr3:24680145-24680164 | None:intergenic | 30.0% | |
| TGTTGTGTTTGTATAGTTTG+GGG | + | Chr3:24680937-24680956 | None:intergenic | 30.0% | |
| TTGTGCCTAATTTACTTTGT+TGG | - | Chr3:24680038-24680057 | MsG0380012794.01.T01:intron | 30.0% | |
| ! | AAGCATTGCCAACAAAAAAT+GGG | + | Chr3:24679802-24679821 | None:intergenic | 30.0% |
| ! | ATTAATTGCAGAAGCTCTTT+TGG | + | Chr3:24680803-24680822 | None:intergenic | 30.0% |
| ! | ATTATTCAAAAAGGCTTTGG+AGG | - | Chr3:24679733-24679752 | MsG0380012794.01.T01:CDS | 30.0% |
| ! | TAATAGGTGGATTTGATTGT+TGG | + | Chr3:24680345-24680364 | None:intergenic | 30.0% |
| AAACGTTCATGAGGTAAAAG+TGG | + | Chr3:24681067-24681086 | None:intergenic | 35.0% | |
| AACGTTCATGAGGTAAAAGT+GGG | + | Chr3:24681066-24681085 | None:intergenic | 35.0% | |
| AAGGAAAATACCTTTCCACT+AGG | + | Chr3:24679458-24679477 | None:intergenic | 35.0% | |
| ACAAAAACAAGCATAGCAGT+GGG | + | Chr3:24680065-24680084 | None:intergenic | 35.0% | |
| ACACCATATTATTGAAGCCA+TGG | + | Chr3:24679952-24679971 | None:intergenic | 35.0% | |
| AGGAATGAATGTTGTTGTGA+CGG | + | Chr3:24680910-24680929 | None:intergenic | 35.0% | |
| ATATTATTGAAGCCATGGTG+AGG | + | Chr3:24679947-24679966 | None:intergenic | 35.0% | |
| ATTGATCCATCAAGCAAATG+AGG | + | Chr3:24679920-24679939 | None:intergenic | 35.0% | |
| CACAACAACATTCATTCCTT+GGG | - | Chr3:24680911-24680930 | MsG0380012794.01.T01:CDS | 35.0% | |
| GAATATATTGCCAGAGACTA+TGG | - | Chr3:24679989-24680008 | MsG0380012794.01.T01:intron | 35.0% | |
| GTGAAAGAGAAATTAGGGTT+AGG | + | Chr3:24680737-24680756 | None:intergenic | 35.0% | |
| GTTATGCATAGCTGATATGA+TGG | - | Chr3:24680190-24680209 | MsG0380012794.01.T01:intron | 35.0% | |
| TCACAACAACATTCATTCCT+TGG | - | Chr3:24680910-24680929 | MsG0380012794.01.T01:CDS | 35.0% | |
| TCACCATGGCTTCAATAATA+TGG | - | Chr3:24679946-24679965 | MsG0380012794.01.T01:intron | 35.0% | |
| TCCGGTTAATGGAATGAATA+AGG | - | Chr3:24679700-24679719 | MsG0380012794.01.T01:CDS | 35.0% | |
| TCTATGACCGTATGAAGATT+GGG | + | Chr3:24679488-24679507 | None:intergenic | 35.0% | |
| TGGGACCAACAAAGTAAATT+AGG | + | Chr3:24680046-24680065 | None:intergenic | 35.0% | |
| TTCTTTCAGTGAAGAATCCA+TGG | - | Chr3:24680757-24680776 | MsG0380012794.01.T01:CDS | 35.0% | |
| ! | GTGTCTAGAATTATCAGCAT+AGG | - | Chr3:24680224-24680243 | MsG0380012794.01.T01:intron | 35.0% |
| ! | TCTAGAATTATCAGCATAGG+CGG | - | Chr3:24680227-24680246 | MsG0380012794.01.T01:intron | 35.0% |
| !! | GAAGCATTGCCAACAAAAAA+TGG | + | Chr3:24679803-24679822 | None:intergenic | 35.0% |
| !!! | AGTGGAAAGGTATTTTCCTT+TGG | - | Chr3:24679458-24679477 | MsG0380012794.01.T01:CDS | 35.0% |
| !!! | CCAGAATTTGGTTTTACCAT+CGG | + | Chr3:24681041-24681060 | None:intergenic | 35.0% |
| AGAGAAATTAGGGTTAGGGT+TGG | + | Chr3:24680732-24680751 | None:intergenic | 40.0% | |
| ATAGCTGATATGATGGCACA+AGG | - | Chr3:24680197-24680216 | MsG0380012794.01.T01:intron | 40.0% | |
| CAACTCTCTGTCTACAATCT+CGG | - | Chr3:24681118-24681137 | MsG0380012794.01.T01:CDS | 40.0% | |
| CACAGTGAATGGTTTACTGT+TGG | - | Chr3:24680284-24680303 | MsG0380012794.01.T01:intron | 40.0% | |
| CCGATGGTAAAACCAAATTC+TGG | - | Chr3:24681038-24681057 | MsG0380012794.01.T01:CDS | 40.0% | |
| CTATGACCGTATGAAGATTG+GGG | + | Chr3:24679487-24679506 | None:intergenic | 40.0% | |
| CTTGTACCACCACAAAACAA+CGG | - | Chr3:24679521-24679540 | MsG0380012794.01.T01:CDS | 40.0% | |
| GAACCATTTGCTCAAGGAAA+CGG | - | Chr3:24679655-24679674 | MsG0380012794.01.T01:CDS | 40.0% | |
| GACAAAAACAAGCATAGCAG+TGG | + | Chr3:24680066-24680085 | None:intergenic | 40.0% | |
| GGACATGTGATATACAGAAC+TGG | - | Chr3:24681184-24681203 | MsG0380012794.01.T01:CDS | 40.0% | |
| GTCTATGACCGTATGAAGAT+TGG | + | Chr3:24679489-24679508 | None:intergenic | 40.0% | |
| GTGGTACAAGAGAAAGATAG+TGG | + | Chr3:24679511-24679530 | None:intergenic | 40.0% | |
| GTTGAGTATTTGGCTGATGA+TGG | + | Chr3:24679844-24679863 | None:intergenic | 40.0% | |
| TAAAAGTGGGTGCCAGAATT+TGG | + | Chr3:24681053-24681072 | None:intergenic | 40.0% | |
| TAGCTGATATGATGGCACAA+GGG | - | Chr3:24680198-24680217 | MsG0380012794.01.T01:intron | 40.0% | |
| TGTATTCTCACCTAGTGGAA+AGG | - | Chr3:24679445-24679464 | MsG0380012794.01.T01:CDS | 40.0% | |
| ! | AGGAAACGGAGGCTAATTTT+TGG | - | Chr3:24679669-24679688 | MsG0380012794.01.T01:CDS | 40.0% |
| ! | ATGTTGTTGTGACGGAAGTT+TGG | + | Chr3:24680902-24680921 | None:intergenic | 40.0% |
| ! | GGGTTATGTTTGTCACCTTT+TGG | + | Chr3:24680578-24680597 | None:intergenic | 40.0% |
| !! | AAACGGAGGCTAATTTTTGG+TGG | - | Chr3:24679672-24679691 | MsG0380012794.01.T01:CDS | 40.0% |
| !! | AATAACGGATTGAGAGCGTT+TGG | + | Chr3:24680658-24680677 | None:intergenic | 40.0% |
| !! | GTTTGTCACCTTTTGGAGAA+TGG | + | Chr3:24680571-24680590 | None:intergenic | 40.0% |
| !! | TGGAGGATTTGTTGTTGGTT+TGG | + | Chr3:24680986-24681005 | None:intergenic | 40.0% |
| !! | TGTTGTTGGTTTGGTGTTGT+AGG | + | Chr3:24680977-24680996 | None:intergenic | 40.0% |
| !!! | AACGGAGGCTAATTTTTGGT+GGG | - | Chr3:24679673-24679692 | MsG0380012794.01.T01:CDS | 40.0% |
| !!! | CGAACTCTCCCATTTTTTGT+TGG | - | Chr3:24679791-24679810 | MsG0380012794.01.T01:CDS | 40.0% |
| !!! | TAATTTTTGGTGGGCTTGTC+CGG | - | Chr3:24679682-24679701 | MsG0380012794.01.T01:CDS | 40.0% |
| !!! | TTGGTTTTACCATCGGAATC+TGG | + | Chr3:24681034-24681053 | None:intergenic | 40.0% |
| AAATTCCTGGTCGAGAGTGA+AGG | - | Chr3:24681277-24681296 | MsG0380012794.01.T01:CDS | 45.0% | |
| AAGAATCCATGGCAGCAGAT+TGG | - | Chr3:24680768-24680787 | MsG0380012794.01.T01:CDS | 45.0% | |
| ACTGGTCGTACTGTGATGAT+CGG | - | Chr3:24681202-24681221 | MsG0380012794.01.T01:CDS | 45.0% | |
| AGTGGAGGTAAACGTTCATG+AGG | + | Chr3:24681076-24681095 | None:intergenic | 45.0% | |
| ATGAAGATTGGGGTGACCAA+AGG | + | Chr3:24679477-24679496 | None:intergenic | 45.0% | |
| ATGGATGCCGAGAAGAAGAT+TGG | - | Chr3:24679623-24679642 | MsG0380012794.01.T01:CDS | 45.0% | |
| CGAGATTGTAGACAGAGAGT+TGG | + | Chr3:24681120-24681139 | None:intergenic | 45.0% | |
| CTCATCGCCAATCTTCTTCT+CGG | + | Chr3:24679633-24679652 | None:intergenic | 45.0% | |
| CTCGTTGTATTCTCACCTAG+TGG | - | Chr3:24679440-24679459 | MsG0380012794.01.T01:CDS | 45.0% | |
| GTCCGATTCTGATCAACCAA+GGG | + | Chr3:24681012-24681031 | None:intergenic | 45.0% | |
| TGAGCTGAACCATTTGCTCA+AGG | - | Chr3:24679649-24679668 | MsG0380012794.01.T01:CDS | 45.0% | |
| TGAGGCTGCAATTGCAACAT+AGG | + | Chr3:24679902-24679921 | None:intergenic | 45.0% | |
| TGGTCACCCCAATCTTCATA+CGG | - | Chr3:24679478-24679497 | MsG0380012794.01.T01:CDS | 45.0% | |
| TTAATGTCGCCACCGATGAA+CGG | + | Chr3:24681259-24681278 | None:intergenic | 45.0% | |
| TTGCAGCCTCATTTGCTTGA+TGG | - | Chr3:24679911-24679930 | MsG0380012794.01.T01:CDS | 45.0% | |
| ! | ACGGTGGTGATGATGATGTA+AGG | - | Chr3:24681332-24681351 | MsG0380012794.01.T01:CDS | 45.0% |
| ! | AGCATTGAGTTCACGAACGT+TGG | + | Chr3:24679579-24679598 | None:intergenic | 45.0% |
| ! | GTTGTGACGGAAGTTTGGAA+TGG | + | Chr3:24680897-24680916 | None:intergenic | 45.0% |
| ! | TTTGTATAGTTTGGGGCCCA+AGG | + | Chr3:24680930-24680949 | None:intergenic | 45.0% |
| !! | ACTTTCTCAAAGCGTCGTAG+CGG | - | Chr3:24679365-24679384 | MsG0380012794.01.T01:CDS | 45.0% |
| !! | GCTTTGAGAAAGTCACTTGC+AGG | + | Chr3:24679358-24679377 | None:intergenic | 45.0% |
| !! | TGTTGGTTTGGTGTTGTAGG+TGG | + | Chr3:24680974-24680993 | None:intergenic | 45.0% |
| !!! | TCTATTTTTATTTATAATTA+AGG | + | Chr3:24680419-24680438 | None:intergenic | 5.0% |
| ACAACAAACACCCCTTCTCC+GGG | - | Chr3:24680621-24680640 | MsG0380012794.01.T01:intron | 50.0% | |
| ACCACATGTACGCTCAAGTC+CGG | + | Chr3:24681229-24681248 | None:intergenic | 50.0% | |
| AGAATCGGACCAGATTCCGA+TGG | - | Chr3:24681022-24681041 | MsG0380012794.01.T01:CDS | 50.0% | |
| AGCAGCATCTGCACCACAAA+GGG | + | Chr3:24679420-24679439 | None:intergenic | 50.0% | |
| AGGAAGAAGAACCCGGAGAA+GGG | + | Chr3:24680635-24680654 | None:intergenic | 50.0% | |
| AGTGAGCTTTGCACCCTTTG+TGG | - | Chr3:24679404-24679423 | MsG0380012794.01.T01:CDS | 50.0% | |
| CACAACAAACACCCCTTCTC+CGG | - | Chr3:24680620-24680639 | MsG0380012794.01.T01:intron | 50.0% | |
| CCATTTGCTCAAGGAAACGG+AGG | - | Chr3:24679658-24679677 | MsG0380012794.01.T01:CDS | 50.0% | |
| CCTCCGTTTCCTTGAGCAAA+TGG | + | Chr3:24679661-24679680 | None:intergenic | 50.0% | |
| CGATTCTGATCAACCAAGGG+CGG | + | Chr3:24681009-24681028 | None:intergenic | 50.0% | |
| CGCCCTTGGTTGATCAGAAT+CGG | - | Chr3:24681007-24681026 | MsG0380012794.01.T01:CDS | 50.0% | |
| CGGTGGCGACATTAAATTCC+TGG | - | Chr3:24681264-24681283 | MsG0380012794.01.T01:CDS | 50.0% | |
| CGTTTGGAGGAAGAAGAACC+CGG | + | Chr3:24680642-24680661 | None:intergenic | 50.0% | |
| GGATCAATGATGCCTCACCA+TGG | - | Chr3:24679932-24679951 | MsG0380012794.01.T01:CDS | 50.0% | |
| GGTCCGATTCTGATCAACCA+AGG | + | Chr3:24681013-24681032 | None:intergenic | 50.0% | |
| GGTTGAAGTCAAGCACACGA+CGG | + | Chr3:24681099-24681118 | None:intergenic | 50.0% | |
| GTGAGCCTCAATGAGTTGCA+TGG | + | Chr3:24679549-24679568 | None:intergenic | 50.0% | |
| GTTCACGAACGTTGGCATTG+CGG | + | Chr3:24679571-24679590 | None:intergenic | 50.0% | |
| TATCACCTTCACTCTCGACC+AGG | + | Chr3:24681285-24681304 | None:intergenic | 50.0% | |
| TCGTACTGTGATGATCGGAC+CGG | - | Chr3:24681207-24681226 | MsG0380012794.01.T01:CDS | 50.0% | |
| !! | AACGGATTGAGAGCGTTTGG+AGG | + | Chr3:24680655-24680674 | None:intergenic | 50.0% |
| !!! | ATGGTGCCGTTGTTTTGTGG+TGG | + | Chr3:24679530-24679549 | None:intergenic | 50.0% |
| !!! | TGCATGGTGCCGTTGTTTTG+TGG | + | Chr3:24679533-24679552 | None:intergenic | 50.0% |
| AACAAATCCTCCACCGCCCT+TGG | - | Chr3:24680993-24681012 | MsG0380012794.01.T01:CDS | 55.0% | |
| AAGTCAAGCACACGACGGAG+TGG | + | Chr3:24681094-24681113 | None:intergenic | 55.0% | |
| ACCGGACTTGAGCGTACATG+TGG | - | Chr3:24681225-24681244 | MsG0380012794.01.T01:CDS | 55.0% | |
| CGGCACCATGCAACTCATTG+AGG | - | Chr3:24679541-24679560 | MsG0380012794.01.T01:CDS | 55.0% | |
| CTGAGACCAATCTGCTGCCA+TGG | + | Chr3:24680777-24680796 | None:intergenic | 55.0% | |
| GAGCAGCATCTGCACCACAA+AGG | + | Chr3:24679421-24679440 | None:intergenic | 55.0% | |
| GAGGAAGAAGAACCCGGAGA+AGG | + | Chr3:24680636-24680655 | None:intergenic | 55.0% | |
| GGAAGAAGAACCCGGAGAAG+GGG | + | Chr3:24680634-24680653 | None:intergenic | 55.0% | |
| GGAATGGAAGATCGCCACGA+CGG | + | Chr3:24680881-24680900 | None:intergenic | 55.0% | |
| GGACTTGAGCGTACATGTGG+TGG | - | Chr3:24681228-24681247 | MsG0380012794.01.T01:CDS | 55.0% | |
| GGTTAGGGTTGGAGAGACAG+AGG | + | Chr3:24680721-24680740 | None:intergenic | 55.0% | |
| TTCTGATCAACCAAGGGCGG+TGG | + | Chr3:24681006-24681025 | None:intergenic | 55.0% | |
| !! | CGGAGAAGGGGTGTTTGTTG+TGG | + | Chr3:24680622-24680641 | None:intergenic | 55.0% |
| !! | GGCGGTGGAGGATTTGTTGT+TGG | + | Chr3:24680991-24681010 | None:intergenic | 55.0% |
| !! | TGGTGGGCTTGTCCGGTTAA+TGG | - | Chr3:24679689-24679708 | MsG0380012794.01.T01:CDS | 55.0% |
| AGATCGCCACGACGGACAGA+CGG | + | Chr3:24680873-24680892 | None:intergenic | 60.0% | |
| GTGGTGGCTGAGCCGTTCAT+CGG | - | Chr3:24681244-24681263 | MsG0380012794.01.T01:CDS | 60.0% | |
| TCAAGCACACGACGGAGTGG+AGG | + | Chr3:24681091-24681110 | None:intergenic | 60.0% | |
| TGATCAACCAAGGGCGGTGG+AGG | + | Chr3:24681003-24681022 | None:intergenic | 60.0% | |
| TTCGTTCCGTCTGTCCGTCG+TGG | - | Chr3:24680864-24680883 | MsG0380012794.01.T01:CDS | 60.0% | |
| GTGGCTGAGCCGTTCATCGG+TGG | - | Chr3:24681247-24681266 | MsG0380012794.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 24679329 | 24681393 | 24679329 | ID=MsG0380012794.01;Name=MsG0380012794.01 |
| Chr3 | mRNA | 24679329 | 24681393 | 24679329 | ID=MsG0380012794.01.T01;Parent=MsG0380012794.01;Name=MsG0380012794.01.T01;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|1|1|2|0|422 |
| Chr3 | exon | 24680753 | 24681393 | 24680753 | ID=MsG0380012794.01.T01:exon:14073;Parent=MsG0380012794.01.T01 |
| Chr3 | exon | 24679329 | 24679956 | 24679329 | ID=MsG0380012794.01.T01:exon:14072;Parent=MsG0380012794.01.T01 |
| Chr3 | CDS | 24680753 | 24681393 | 24680753 | ID=MsG0380012794.01.T01:cds;Parent=MsG0380012794.01.T01 |
| Chr3 | CDS | 24679329 | 24679956 | 24679329 | ID=MsG0380012794.01.T01:cds;Parent=MsG0380012794.01.T01 |
| Gene Sequence |
| Protein sequence |
