AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380013478.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013478.01.T01 MTR_3g449250 98.566 558 8 0 1 558 1 558 0.0 1115
MsG0380013478.01.T01 MTR_3g449250 98.540 548 8 0 1 548 1 548 0.0 1094
MsG0380013478.01.T01 MTR_5g090120 73.291 468 116 2 1 468 1 459 0.0 692
MsG0380013478.01.T01 MTR_1g102410 43.147 394 195 7 91 459 45 434 2.03e-93 299
MsG0380013478.01.T01 MTR_6g056080 41.842 380 208 6 86 456 99 474 1.67e-87 285
MsG0380013478.01.T01 MTR_3g467550 40.642 374 194 8 115 474 111 470 1.69e-74 246
MsG0380013478.01.T01 MTR_3g467550 40.642 374 194 8 115 474 142 501 4.98e-74 246
MsG0380013478.01.T01 MTR_4g134170 40.506 395 199 9 96 468 293 673 5.02e-74 249
MsG0380013478.01.T01 MTR_6g005320 40.355 394 199 9 96 468 255 633 1.79e-73 247
MsG0380013478.01.T01 MTR_5g027840 41.317 334 189 5 107 433 119 452 5.12e-73 242
MsG0380013478.01.T01 MTR_1g054630 37.157 401 233 8 111 493 175 574 1.28e-71 241
MsG0380013478.01.T01 MTR_2g100230 37.571 354 212 5 100 448 106 455 4.80e-71 236
MsG0380013478.01.T01 MTR_4g114120 35.797 433 246 8 91 495 141 569 1.83e-70 239
MsG0380013478.01.T01 MTR_3g083690 36.250 400 237 8 91 473 146 544 2.65e-69 234
MsG0380013478.01.T01 MTR_2g032630 38.095 378 220 7 95 463 501 873 1.34e-68 240
MsG0380013478.01.T01 MTR_6g005550 37.176 347 210 5 91 433 166 508 2.96e-68 234
MsG0380013478.01.T01 MTR_2g007000 39.496 357 207 5 93 443 507 860 6.07e-68 238
MsG0380013478.01.T01 MTR_6g082080 37.903 372 218 7 94 460 14 377 1.33e-67 225
MsG0380013478.01.T01 MTR_7g056830 34.932 438 258 10 94 519 14 436 3.12e-67 224
MsG0380013478.01.T01 MTR_4g105100 36.565 361 217 6 101 453 213 569 6.54e-67 228
MsG0380013478.01.T01 MTR_7g109720 36.512 367 220 6 88 443 223 587 2.08e-65 227
MsG0380013478.01.T01 MTR_7g076800 34.383 381 237 5 83 460 134 504 5.36e-65 221
MsG0380013478.01.T01 MTR_7g076830 34.383 381 237 5 83 460 136 506 7.82e-65 220
MsG0380013478.01.T01 MTR_7g076820 34.383 381 237 6 83 460 143 513 1.60e-64 219
MsG0380013478.01.T01 MTR_3g467550 42.444 311 160 7 115 411 142 447 4.59e-64 216
MsG0380013478.01.T01 MTR_2g039960 36.170 376 227 7 94 465 45 411 1.64e-63 214
MsG0380013478.01.T01 MTR_2g438110 32.884 371 238 4 93 460 37 399 2.26e-63 213
MsG0380013478.01.T01 MTR_2g041140 37.113 388 223 10 79 456 133 509 1.75e-62 219
MsG0380013478.01.T01 MTR_1g095810 33.933 445 249 13 100 510 155 588 1.87e-62 216
MsG0380013478.01.T01 MTR_3g049990 36.623 385 226 9 80 456 145 519 1.43e-61 216
MsG0380013478.01.T01 MTR_1g026830 37.151 358 202 9 100 442 157 506 1.79e-61 213
MsG0380013478.01.T01 MTR_2g099620 32.857 420 254 7 56 472 3 397 2.05e-61 208
MsG0380013478.01.T01 MTR_4g125970 35.106 376 231 7 94 465 45 411 4.37e-61 207
MsG0380013478.01.T01 MTR_4g125970 35.106 376 231 7 94 465 62 428 1.52e-60 206
MsG0380013478.01.T01 MTR_8g018400 34.324 370 232 5 94 460 45 406 1.90e-60 206
MsG0380013478.01.T01 MTR_2g099620 34.865 370 230 5 94 460 45 406 2.05e-60 206
MsG0380013478.01.T01 MTR_4g079320 34.493 345 215 6 94 433 23 361 1.48e-55 200
MsG0380013478.01.T01 MTR_3g071620 32.240 366 223 7 93 435 19 382 1.78e-53 191
MsG0380013478.01.T01 MTR_2g066050 35.068 365 219 7 94 449 57 412 1.09e-50 182
MsG0380013478.01.T01 MTR_4g105100 35.430 302 186 5 101 397 213 510 1.68e-50 182
MsG0380013478.01.T01 MTR_7g057250 33.333 414 201 11 93 434 166 576 2.07e-50 186
MsG0380013478.01.T01 MTR_3g107420 31.728 353 211 9 96 434 53 389 4.62e-48 173
MsG0380013478.01.T01 MTR_8g027775 33.043 345 213 9 108 436 120 462 1.94e-47 174
MsG0380013478.01.T01 MTR_4g112340 33.144 353 209 12 97 435 108 447 2.19e-47 174
MsG0380013478.01.T01 MTR_2g055850 31.356 354 223 9 94 435 95 440 6.17e-47 172
MsG0380013478.01.T01 MTR_1g012420 30.312 353 216 9 96 434 53 389 8.35e-46 167
MsG0380013478.01.T01 MTR_4g010565 29.921 381 236 10 96 461 130 494 2.71e-45 167
MsG0380013478.01.T01 MTR_6g033070 31.081 370 241 7 82 442 132 496 4.52e-45 167
MsG0380013478.01.T01 MTR_8g027770 30.986 355 226 8 101 436 207 561 9.42e-45 168
MsG0380013478.01.T01 MTR_8g027780 32.174 345 216 9 108 436 124 466 1.23e-44 166
MsG0380013478.01.T01 MTR_8g097000 29.897 388 237 10 74 436 271 648 3.20e-44 167
MsG0380013478.01.T01 MTR_0915s0010 35.069 288 174 6 106 390 5 282 8.31e-44 157
MsG0380013478.01.T01 MTR_6g039840 32.000 375 227 9 76 431 101 466 7.08e-43 163
MsG0380013478.01.T01 MTR_2g063080 26.972 545 290 15 11 458 3 536 1.77e-42 160
MsG0380013478.01.T01 MTR_7g100820 31.452 372 230 13 104 465 148 504 3.67e-42 160
MsG0380013478.01.T01 MTR_1g083130 28.440 436 256 8 86 466 22 456 3.78e-42 160
MsG0380013478.01.T01 MTR_4g059460 26.115 471 260 13 77 464 26 491 1.15e-37 147
MsG0380013478.01.T01 MTR_5g092560 31.624 351 221 10 96 435 83 425 4.27e-37 147
MsG0380013478.01.T01 MTR_2g043360 26.714 423 236 11 115 464 67 488 6.27e-36 142
MsG0380013478.01.T01 MTR_4g068990 30.376 372 235 10 91 449 78 438 1.20e-35 142
MsG0380013478.01.T01 MTR_1g046570 29.534 386 222 13 115 460 16 391 4.70e-35 136
MsG0380013478.01.T01 MTR_8g018370 30.337 356 215 8 119 473 2 325 1.81e-34 133
MsG0380013478.01.T01 MTR_5g077690 27.739 429 222 13 96 448 35 451 2.01e-34 136
MsG0380013478.01.T01 MTR_8g027780 30.696 316 201 9 108 407 124 437 3.43e-34 135
MsG0380013478.01.T01 MTR_5g069330 29.521 376 244 10 94 460 7 370 5.14e-34 134
MsG0380013478.01.T01 MTR_5g069330 29.521 376 244 10 94 460 11 374 7.49e-34 133
MsG0380013478.01.T01 MTR_6g039840 32.986 288 173 7 160 431 7 290 1.58e-33 134
MsG0380013478.01.T01 MTR_4g112320 32.389 247 154 8 197 435 24 265 7.15e-33 130
MsG0380013478.01.T01 MTR_1g061970 27.041 392 229 13 110 465 108 478 1.44e-31 128
MsG0380013478.01.T01 MTR_4g077370 36.279 215 121 5 81 287 240 446 2.02e-29 121
MsG0380013478.01.T01 MTR_4g077370 33.333 198 110 4 89 283 1 179 1.09e-21 98.6
MsG0380013478.01.T01 MTR_4g049910 26.582 395 241 11 93 459 58 431 4.19e-29 120
MsG0380013478.01.T01 MTR_3g118120 26.750 400 238 14 94 451 136 522 3.87e-27 115
MsG0380013478.01.T01 MTR_3g107420 32.843 204 116 5 96 289 53 245 1.15e-24 105
MsG0380013478.01.T01 MTR_2g043360 25.882 340 181 10 195 464 32 370 2.85e-24 106
MsG0380013478.01.T01 MTR_8g042690 24.725 364 238 10 100 443 28 375 1.18e-22 101
MsG0380013478.01.T01 MTR_1g022305 25.231 432 228 15 94 501 7 367 2.60e-22 100
MsG0380013478.01.T01 MTR_4g459350 29.487 234 135 7 77 281 23 255 9.72e-22 95.9
MsG0380013478.01.T01 MTR_5g092560 31.553 206 132 4 236 435 12 214 1.30e-21 99.0
MsG0380013478.01.T01 MTR_8g032230 38.000 150 85 3 94 240 14 158 1.21e-20 89.7
MsG0380013478.01.T01 MTR_4g068990 30.000 220 144 5 236 449 12 227 3.26e-20 94.7
MsG0380013478.01.T01 MTR_4g131750 26.158 367 235 9 90 426 82 442 1.40e-18 89.4
MsG0380013478.01.T01 MTR_1g015150 62.319 69 12 1 84 152 49 103 4.33e-18 81.3
MsG0380013478.01.T01 MTR_8g079462 25.882 255 137 8 240 448 19 267 1.06e-15 78.6
MsG0380013478.01.T01 MTR_3g063040 25.215 349 218 13 108 438 13 336 1.01e-12 71.6
MsG0380013478.01.T01 MTR_2g042440 23.670 376 211 12 115 453 46 382 2.94e-12 70.1
MsG0380013478.01.T01 MTR_2g042440 23.670 376 211 12 115 453 46 382 3.28e-12 69.7
MsG0380013478.01.T01 MTR_0427s0010 27.149 221 123 6 261 466 16 213 1.68e-11 64.7
MsG0380013478.01.T01 MTR_8g062720 33.621 116 75 2 336 450 437 551 2.65e-11 66.6
MsG0380013478.01.T01 MTR_1g102425 33.846 130 74 5 324 452 77 195 3.77e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013478.01.T01 AT3G22330 65.235 489 151 4 1 472 1 487 0.0 644
MsG0380013478.01.T01 AT3G22310 63.928 499 153 3 1 472 1 499 0.0 629
MsG0380013478.01.T01 AT3G22310 63.928 499 153 3 1 472 1 499 0.0 629
MsG0380013478.01.T01 AT5G26742 63.104 393 136 3 73 456 81 473 7.83e-169 497
MsG0380013478.01.T01 AT5G26742 63.104 393 136 3 73 456 81 473 8.07e-169 497
MsG0380013478.01.T01 AT5G26742 65.988 344 113 1 117 456 37 380 8.97e-157 463
MsG0380013478.01.T01 AT5G62190 44.974 378 195 6 91 459 98 471 1.36e-92 298
MsG0380013478.01.T01 AT1G20920 40.282 355 203 6 95 443 197 548 4.25e-73 249
MsG0380013478.01.T01 AT1G31970 42.262 336 184 6 107 433 132 466 9.25e-73 242
MsG0380013478.01.T01 AT3G01540 37.960 353 211 5 95 443 164 512 3.01e-72 243
MsG0380013478.01.T01 AT3G01540 37.960 353 211 5 95 443 164 512 3.01e-72 243
MsG0380013478.01.T01 AT3G01540 37.960 353 211 5 95 443 164 512 3.01e-72 243
MsG0380013478.01.T01 AT3G01540 37.960 353 211 5 95 443 164 512 3.14e-72 243
MsG0380013478.01.T01 AT5G14610 39.067 343 201 5 95 433 167 505 5.76e-72 243
MsG0380013478.01.T01 AT5G14610 39.067 343 201 5 95 433 167 505 6.66e-72 242
MsG0380013478.01.T01 AT1G20920 39.944 358 200 6 95 443 535 886 7.21e-72 249
MsG0380013478.01.T01 AT1G20920 39.944 358 200 6 95 443 535 886 7.21e-72 249
MsG0380013478.01.T01 AT1G20920 39.944 358 200 6 95 443 535 886 7.21e-72 249
MsG0380013478.01.T01 AT1G20920 39.944 358 200 6 95 443 535 886 7.21e-72 249
MsG0380013478.01.T01 AT1G20920 39.944 358 200 6 95 443 535 886 7.21e-72 249
MsG0380013478.01.T01 AT1G20920 39.944 358 200 6 95 443 535 886 7.21e-72 249
MsG0380013478.01.T01 AT5G14610 39.067 343 201 5 95 433 175 513 8.58e-72 242
MsG0380013478.01.T01 AT1G55150 36.256 422 236 8 87 490 90 496 1.09e-71 238
MsG0380013478.01.T01 AT1G55150 36.256 422 236 8 87 490 115 521 3.48e-71 238
MsG0380013478.01.T01 AT2G33730 40.833 360 188 7 96 433 320 676 3.54e-71 242
MsG0380013478.01.T01 AT5G14610 40.432 324 185 5 114 433 55 374 5.15e-71 236
MsG0380013478.01.T01 AT5G14610 40.432 324 185 5 114 433 55 374 5.15e-71 236
MsG0380013478.01.T01 AT5G63120 37.752 347 211 4 100 443 176 520 1.18e-70 238
MsG0380013478.01.T01 AT5G14610 40.000 330 190 5 108 433 248 573 8.46e-70 238
MsG0380013478.01.T01 AT5G60990 35.681 426 249 12 91 498 11 429 7.41e-68 227
MsG0380013478.01.T01 AT3G06480 38.109 349 208 5 95 439 441 785 1.95e-67 236
MsG0380013478.01.T01 AT3G58570 37.731 379 219 8 111 473 168 545 2.85e-67 230
MsG0380013478.01.T01 AT3G58510 35.659 387 236 7 114 487 176 562 1.13e-66 228
MsG0380013478.01.T01 AT3G58510 35.659 387 236 7 114 487 176 562 1.13e-66 228
MsG0380013478.01.T01 AT3G58510 35.659 387 236 7 114 487 176 562 1.13e-66 228
MsG0380013478.01.T01 AT2G42520 36.939 379 222 9 111 473 181 558 2.90e-66 227
MsG0380013478.01.T01 AT2G42520 36.939 379 222 9 111 473 181 558 2.90e-66 227
MsG0380013478.01.T01 AT2G42520 36.939 379 222 9 111 473 181 558 2.90e-66 227
MsG0380013478.01.T01 AT2G47330 38.227 361 201 9 95 443 234 584 6.71e-66 228
MsG0380013478.01.T01 AT3G19760 32.316 393 251 5 75 460 17 401 1.38e-65 219
MsG0380013478.01.T01 AT1G51380 34.595 370 231 4 94 460 27 388 1.10e-64 216
MsG0380013478.01.T01 AT4G00660 33.858 381 239 5 83 460 125 495 3.17e-64 218
MsG0380013478.01.T01 AT4G00660 33.858 381 239 5 83 460 125 495 3.17e-64 218
MsG0380013478.01.T01 AT2G45810 35.156 384 234 8 83 462 148 520 3.50e-64 219
MsG0380013478.01.T01 AT3G61240 34.555 382 235 8 83 460 118 488 1.85e-63 216
MsG0380013478.01.T01 AT3G61240 34.555 382 235 8 83 460 118 488 1.85e-63 216
MsG0380013478.01.T01 AT1G16280 37.731 379 204 9 94 456 63 425 2.44e-63 216
MsG0380013478.01.T01 AT4G16630 36.951 387 224 10 79 456 160 535 3.57e-63 221
MsG0380013478.01.T01 AT5G51280 36.339 366 206 8 94 442 151 506 3.74e-62 215
MsG0380013478.01.T01 AT3G09620 37.604 359 178 8 95 443 403 725 1.59e-61 219
MsG0380013478.01.T01 AT3G09620 37.604 359 178 8 95 443 402 724 1.79e-61 219
MsG0380013478.01.T01 AT3G13920 35.580 371 226 7 94 460 44 405 3.89e-61 207
MsG0380013478.01.T01 AT3G13920 35.248 383 230 8 94 472 34 402 4.68e-61 207
MsG0380013478.01.T01 AT1G72730 35.135 370 229 4 94 460 46 407 6.90e-61 207
MsG0380013478.01.T01 AT1G28180 37.578 322 190 6 118 433 2 318 1.63e-60 204
MsG0380013478.01.T01 AT3G13920 36.592 358 214 7 107 460 52 400 4.12e-60 205
MsG0380013478.01.T01 AT5G14610 37.126 334 197 7 95 424 175 499 4.70e-60 207
MsG0380013478.01.T01 AT3G13920 36.158 354 213 7 94 443 48 392 8.99e-60 204
MsG0380013478.01.T01 AT3G13920 36.158 354 213 7 94 443 44 388 9.22e-60 204
MsG0380013478.01.T01 AT4G33370 36.565 361 202 8 100 443 108 458 1.45e-59 207
MsG0380013478.01.T01 AT1G77030 35.652 345 211 6 94 433 33 371 1.71e-59 212
MsG0380013478.01.T01 AT1G54270 34.771 371 229 6 94 460 44 405 2.45e-58 200
MsG0380013478.01.T01 AT1G54270 35.754 358 217 6 107 460 52 400 2.60e-57 197
MsG0380013478.01.T01 AT1G71370 33.144 353 225 5 93 435 20 371 3.53e-57 201
MsG0380013478.01.T01 AT3G06480 36.392 316 193 5 95 406 441 752 2.14e-56 202
MsG0380013478.01.T01 AT5G63120 37.134 307 188 4 100 403 176 480 4.67e-55 193
MsG0380013478.01.T01 AT5G63120 37.134 307 188 4 100 403 176 480 4.67e-55 193
MsG0380013478.01.T01 AT5G63120 37.134 307 188 4 100 403 176 480 4.67e-55 193
MsG0380013478.01.T01 AT5G63120 37.209 301 184 4 100 397 176 474 6.10e-55 193
MsG0380013478.01.T01 AT5G05450 32.869 359 221 8 96 435 23 380 6.96e-53 190
MsG0380013478.01.T01 AT3G18600 33.994 353 215 10 94 436 94 438 4.94e-52 187
MsG0380013478.01.T01 AT5G65900 33.333 366 225 9 94 448 159 516 3.83e-51 186
MsG0380013478.01.T01 AT5G08610 32.732 388 230 13 101 466 394 772 7.22e-49 182
MsG0380013478.01.T01 AT3G02065 31.476 359 236 7 89 440 110 465 1.43e-47 173
MsG0380013478.01.T01 AT3G02065 31.476 359 236 7 89 440 110 465 1.43e-47 173
MsG0380013478.01.T01 AT5G08620 31.818 374 238 9 108 466 99 470 1.55e-47 174
MsG0380013478.01.T01 AT5G63630 30.263 380 250 8 101 466 260 638 4.53e-47 176
MsG0380013478.01.T01 AT5G63630 30.263 380 250 8 101 466 66 444 8.35e-47 172
MsG0380013478.01.T01 AT3G02065 32.615 325 209 7 123 440 7 328 1.50e-46 167
MsG0380013478.01.T01 AT1G12770 28.777 417 244 8 93 456 114 530 1.26e-45 169
MsG0380013478.01.T01 AT1G12770 28.777 417 244 8 93 456 114 530 1.26e-45 169
MsG0380013478.01.T01 AT1G63250 32.778 360 219 10 96 436 335 690 1.80e-45 172
MsG0380013478.01.T01 AT5G11170 30.053 376 242 10 96 461 53 417 2.03e-45 166
MsG0380013478.01.T01 AT5G11200 30.053 376 242 10 96 461 53 417 2.03e-45 166
MsG0380013478.01.T01 AT3G16840 31.605 405 203 11 115 448 216 617 1.14e-44 169
MsG0380013478.01.T01 AT3G16840 31.605 405 203 11 115 448 217 618 1.17e-44 169
MsG0380013478.01.T01 AT2G07750 32.493 357 224 10 96 436 382 737 1.69e-44 169
MsG0380013478.01.T01 AT5G11170 31.105 344 216 10 128 461 2 334 8.45e-43 156
MsG0380013478.01.T01 AT4G09730 31.844 358 221 9 93 431 116 469 7.48e-41 157
MsG0380013478.01.T01 AT3G09720 29.521 376 246 10 92 460 144 507 5.45e-40 153
MsG0380013478.01.T01 AT3G09720 29.521 376 246 10 92 460 144 507 5.45e-40 153
MsG0380013478.01.T01 AT4G15850 28.153 444 239 12 96 466 38 474 7.75e-40 152
MsG0380013478.01.T01 AT5G11200 28.125 416 239 12 96 461 53 458 1.56e-39 150
MsG0380013478.01.T01 AT4G34910 28.346 381 227 5 93 427 50 430 1.21e-38 150
MsG0380013478.01.T01 AT5G11200 27.021 433 240 14 96 461 53 476 4.29e-38 147
MsG0380013478.01.T01 AT2G40700 27.570 428 228 11 115 464 57 480 1.10e-37 147
MsG0380013478.01.T01 AT1G71280 30.696 316 186 7 93 401 21 310 4.38e-37 140
MsG0380013478.01.T01 AT1G71280 30.599 317 187 7 93 402 21 311 6.56e-36 140
MsG0380013478.01.T01 AT5G54910 29.067 375 239 11 90 449 72 434 1.16e-34 139
MsG0380013478.01.T01 AT1G51380 35.586 222 133 3 94 313 27 240 5.00e-34 130
MsG0380013478.01.T01 AT1G51380 36.946 203 120 2 94 294 27 223 3.29e-33 129
MsG0380013478.01.T01 AT1G51380 36.946 203 120 2 94 294 27 223 5.87e-33 128
MsG0380013478.01.T01 AT3G53110 29.012 324 201 11 127 431 132 445 1.62e-30 125
MsG0380013478.01.T01 AT3G06980 25.532 376 245 9 91 435 376 747 5.86e-30 125
MsG0380013478.01.T01 AT5G19210 25.946 370 229 12 90 426 77 434 3.20e-21 97.4
MsG0380013478.01.T01 AT1G28180 39.496 119 68 2 118 232 2 120 5.39e-18 80.5
MsG0380013478.01.T01 AT1G59990 35.593 118 74 2 336 452 426 542 1.26e-12 70.9
MsG0380013478.01.T01 AT1G59990 35.593 118 74 2 336 452 426 542 1.29e-12 70.9
MsG0380013478.01.T01 AT1G10930 23.944 355 206 13 114 437 456 777 2.25e-11 67.4

Find 146 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAAATAATTAGTCTTTA+TGG 0.084893 3:+39060558 MsG0380013478.01.T01:CDS
ACAAATATCTCTGAATTATT+TGG 0.134715 3:-39063137 None:intergenic
CGCAAAGCTCTTTCCCATTC+AGG 0.214242 3:+39059076 MsG0380013478.01.T01:CDS
AAACAGCTATTTCAATGTTT+TGG 0.259542 3:+39062193 MsG0380013478.01.T01:CDS
GAAGAAACGCCGTGAGAATA+TGG 0.267167 3:-39058781 None:intergenic
TTGCTAATTTGTTGCTGAAT+AGG 0.267190 3:-39060588 None:intergenic
ATATCCCTCCCTTGCATTGC+AGG 0.268425 3:-39060234 None:intergenic
AGACTAATTATTTCCAAGTT+AGG 0.275152 3:-39060552 None:intergenic
TGGAAATAATTAGTCTTTAT+GGG 0.279985 3:+39060559 MsG0380013478.01.T01:CDS
TATGGGAAATCCAGTGGTTT+TGG 0.292126 3:+39064712 MsG0380013478.01.T01:CDS
ACTGGGAAAACTCTTGCTTT+TGG 0.296075 3:+39060279 MsG0380013478.01.T01:CDS
TCTCGGCAACAATGCCTTCT+TGG 0.303539 3:+39060805 MsG0380013478.01.T01:CDS
TGGATTTCCCATAGCCATTT+CGG 0.310094 3:-39064702 None:intergenic
CCACTTTCAACAGCAATCTT+TGG 0.314583 3:-39064589 None:intergenic
GAGATATTTGTTCATCGATC+TGG 0.318649 3:+39063149 MsG0380013478.01.T01:CDS
AGGCTGTTTCACGCGAAATC+TGG 0.345032 3:+39058885 MsG0380013478.01.T01:CDS
CTCAATTGTCTTTACATCCC+TGG 0.345874 3:-39063231 None:intergenic
AAGTTTAGCTCAGGTAAATC+TGG 0.349135 3:+39064844 MsG0380013478.01.T01:CDS
AATAGCAGTTCCTTTCTTAC+CGG 0.354230 3:-39063186 None:intergenic
CAGAGAGAAAGAACTCTTAC+TGG 0.358585 3:+39062164 MsG0380013478.01.T01:CDS
CGTCAATCAAGTAGTAGTTC+TGG 0.364601 3:+39064673 MsG0380013478.01.T01:CDS
TGATCGTCTATCACATATAA+TGG 0.364977 3:+39062094 MsG0380013478.01.T01:CDS
TCAAGTCGTTCCAGTGGCTT+TGG 0.365127 3:+39064820 MsG0380013478.01.T01:CDS
AGTGGTCGATACGGCTCTTC+GGG 0.382018 3:+39064640 MsG0380013478.01.T01:CDS
CAAGGATGCTGCACCTAACT+TGG 0.388097 3:+39060539 MsG0380013478.01.T01:CDS
AAAGAGATCGTGAATGCGTT+GGG 0.389527 3:+39059041 MsG0380013478.01.T01:CDS
ATAAGAGTTTGACGCTTAGA+AGG 0.390311 3:-39060780 None:intergenic
CTGAGAATCGTGCTTGTCAT+TGG 0.390811 3:-39058747 None:intergenic
CTCTCCTACTTTGCCGTTGA+CGG 0.391260 3:-39058862 None:intergenic
GCGTCAAACTCTTATGTTCT+CGG 0.392179 3:+39060788 MsG0380013478.01.T01:CDS
CAGCAACAAATTAGCAAACT+TGG 0.398443 3:+39060594 MsG0380013478.01.T01:CDS
TAGTGGTCGATACGGCTCTT+CGG 0.402122 3:+39064639 MsG0380013478.01.T01:CDS
CTTAATAATCTTATCCAAGA+TGG 0.402999 3:-39060307 None:intergenic
AAGAATTCCTGCTTTAGAAT+AGG 0.405477 3:-39061736 None:intergenic
ACTTACAAGATCAATTGTTA+AGG 0.411746 3:-39060862 None:intergenic
GGCTTTGGAAAGTTTAGCTC+AGG 0.415998 3:+39064835 MsG0380013478.01.T01:CDS
CTTACAAGATCAATTGTTAA+GGG 0.417520 3:-39060861 None:intergenic
GGTCGAGCCAGAACAGGAAC+TGG 0.422643 3:+39060261 MsG0380013478.01.T01:CDS
AAGAAGGGATCCTCTGGCTT+TGG 0.431776 3:+39060470 MsG0380013478.01.T01:CDS
CCAAAGATTGCTGTTGAAAG+TGG 0.438332 3:+39064589 MsG0380013478.01.T01:CDS
GGATCTGGCCGAAATGGCTA+TGG 0.441031 3:+39064694 MsG0380013478.01.T01:CDS
TCAGGTAAATCTGGGAGATA+TGG 0.441756 3:+39064853 MsG0380013478.01.T01:CDS
CAATTGTTAAGGGTTTGTTT+AGG 0.442345 3:-39060851 None:intergenic
GTGTTATTGATCTTCTCAAA+AGG 0.443558 3:+39060652 MsG0380013478.01.T01:CDS
AGTGGATCAGCAGACATGTT+TGG 0.451065 3:+39064607 MsG0380013478.01.T01:CDS
AAATTAAACCATACCTGAAT+GGG 0.452116 3:-39059089 None:intergenic
GATTGGAGATCGCGAAGCTT+GGG 0.452320 3:+39059012 MsG0380013478.01.T01:CDS
AGTTCTGGATCTGGCCGAAA+TGG 0.458244 3:+39064688 MsG0380013478.01.T01:CDS
GGCTCTAGTTCAAGGAAGTC+AGG 0.459719 3:+39064736 MsG0380013478.01.T01:CDS
ATGATTGGTCGAGCCAGAAC+AGG 0.460079 3:+39060255 MsG0380013478.01.T01:CDS
GTTCATCGATCTGGACGAAC+AGG 0.460090 3:+39063158 MsG0380013478.01.T01:CDS
GAACTTACAAGATCAACATT+TGG 0.460659 3:-39062251 None:intergenic
TGTTATTGATCTTCTCAAAA+GGG 0.463599 3:+39060653 MsG0380013478.01.T01:CDS
ACAGGACGTGCCGGTAAGAA+AGG 0.464924 3:+39063176 MsG0380013478.01.T01:CDS
TTTATTGTAGAGAGCTGTGC+TGG 0.465875 3:+39060209 MsG0380013478.01.T01:intron
GGATTGGAGATCGCGAAGCT+TGG 0.466735 3:+39059011 MsG0380013478.01.T01:CDS
GTGAATGCGTTGGGGAAGAA+AGG 0.468918 3:+39059050 MsG0380013478.01.T01:CDS
TTGATTATGGCAGCAAAAGA+AGG 0.470838 3:+39060454 MsG0380013478.01.T01:intron
GAAATTAAACCATACCTGAA+TGG 0.471139 3:-39059090 None:intergenic
GCAACTGATGTTGCTTCTCG+TGG 0.472676 3:+39062218 MsG0380013478.01.T01:CDS
ACAAGTTGAAAAGGAATTCA+AGG 0.474968 3:+39060521 MsG0380013478.01.T01:CDS
GATATTGTAGTCGGCACACC+TGG 0.475092 3:+39060627 MsG0380013478.01.T01:CDS
TAGACGATCAGCATCACGTT+TGG 0.475355 3:-39062081 None:intergenic
TACTTTGCCGTTGACGGCGG+AGG 0.479815 3:-39058856 None:intergenic
TCTGGTAAAACGGATAAATA+CGG 0.481870 3:+39064778 MsG0380013478.01.T01:CDS
TTGTTGTCCTCCGCCGTCAA+CGG 0.493780 3:+39058849 MsG0380013478.01.T01:CDS
GGAAATAATTAGTCTTTATG+GGG 0.493886 3:+39060560 MsG0380013478.01.T01:CDS
TCAAGTAGTAGTTCTGGATC+TGG 0.497091 3:+39064679 MsG0380013478.01.T01:CDS
CAGCAAAAGAAGGGATCCTC+TGG 0.505808 3:+39060464 MsG0380013478.01.T01:intron
TGGAGATTCTGATCAGAAGT+TGG 0.507254 3:+39061677 MsG0380013478.01.T01:CDS
TGGAGTCTTACTGTTATAAG+AGG 0.507382 3:-39061762 None:intergenic
TAAAGAGATCGTGAATGCGT+TGG 0.509365 3:+39059040 MsG0380013478.01.T01:CDS
GATACGGCTCTTCGGGAGGT+AGG 0.511083 3:+39064647 MsG0380013478.01.T01:CDS
TCTAATGCCTATTCTAAAGC+AGG 0.512824 3:+39061729 MsG0380013478.01.T01:CDS
ACGGATAAATACGGTGGTGG+AGG 0.516721 3:+39064787 MsG0380013478.01.T01:CDS
TCCACACAGAAAATCAATCC+AGG 0.519284 3:+39063213 MsG0380013478.01.T01:CDS
GATCACGCGGAACACGATGA+TGG 0.522588 3:+39058966 MsG0380013478.01.T01:CDS
TTAATAATCTTATCCAAGAT+GGG 0.524926 3:-39060306 None:intergenic
GTAAGATTCTTTATCCAAGA+AGG 0.527112 3:-39060819 None:intergenic
TGTCGTGCAAGTTCTCTAGT+TGG 0.530655 3:-39060501 None:intergenic
ACTTGCACGACAAGTTGAAA+AGG 0.531541 3:+39060512 MsG0380013478.01.T01:CDS
CAACTGATGTTGCTTCTCGT+GGG 0.532954 3:+39062219 MsG0380013478.01.T01:CDS
GTTGAACTTCCACTCGTCGC+TGG 0.537760 3:+39058911 MsG0380013478.01.T01:CDS
CTCTGATAGGAACATGCTAA+AGG 0.538109 3:+39062032 MsG0380013478.01.T01:intron
ATACGGCTCTTCGGGAGGTA+GGG 0.545873 3:+39064648 MsG0380013478.01.T01:CDS
TGAATGCGTTGGGGAAGAAA+GGG 0.551406 3:+39059051 MsG0380013478.01.T01:CDS
AGAAGATCAATAACACGTCC+AGG 0.554477 3:-39060645 None:intergenic
TCGTGGTGCGCAGCTTGCTG+TGG 0.555938 3:+39058938 MsG0380013478.01.T01:CDS
CAAATTAGCAAACTTGGTAG+TGG 0.556602 3:+39060600 MsG0380013478.01.T01:CDS
TCCGCCGTCAACGGCAAAGT+AGG 0.558807 3:+39058858 MsG0380013478.01.T01:CDS
GTTATTGATCTTCTCAAAAG+GGG 0.561000 3:+39060654 MsG0380013478.01.T01:CDS
TGTCAGTGGTGATGAAGGAT+TGG 0.564517 3:+39058995 MsG0380013478.01.T01:CDS
AGTTTAGCTCAGGTAAATCT+GGG 0.566547 3:+39064845 MsG0380013478.01.T01:CDS
GTGCTGGAACCTGCAATGCA+AGG 0.568416 3:+39060225 MsG0380013478.01.T01:CDS
GATCTGGCCGAAATGGCTAT+GGG 0.570071 3:+39064695 MsG0380013478.01.T01:CDS
GCGGAACACGATGATGGTTG+CGG 0.571554 3:+39058972 MsG0380013478.01.T01:CDS
ACGCCGTGAGAATATGGAAG+AGG 0.573074 3:-39058775 None:intergenic
TCTGATCAGAAGTTGGCAGA+TGG 0.573716 3:+39061684 MsG0380013478.01.T01:CDS
ATGCAAGGGAGGGATATGAT+TGG 0.576052 3:+39060240 MsG0380013478.01.T01:CDS
TGCTGGAACCTGCAATGCAA+GGG 0.576182 3:+39060226 MsG0380013478.01.T01:CDS
AAGACAATTGAGAGAGACGT+TGG 0.577942 3:+39063242 MsG0380013478.01.T01:CDS
TGCGGTGTCAGTGGTGATGA+AGG 0.581275 3:+39058990 MsG0380013478.01.T01:CDS
ATTAAATGCGAGGCCTTGCA+TGG 0.587294 3:+39062125 MsG0380013478.01.T01:CDS
GCTAAACTTTCCAAAGCCAC+TGG 0.588118 3:-39064830 None:intergenic
TGGAACCTGCAATGCAAGGG+AGG 0.593155 3:+39060229 MsG0380013478.01.T01:CDS
TGATTATGGCAGCAAAAGAA+GGG 0.594812 3:+39060455 MsG0380013478.01.T01:intron
CTAGTTCAAGGAAGTCAGGA+GGG 0.596259 3:+39064740 MsG0380013478.01.T01:CDS
GGAACCTGCAATGCAAGGGA+GGG 0.598313 3:+39060230 MsG0380013478.01.T01:CDS
TCCTACTTTGCCGTTGACGG+CGG 0.599155 3:-39058859 None:intergenic
AGCAGTTCAAGTCGTTCCAG+TGG 0.601225 3:+39064814 MsG0380013478.01.T01:CDS
AGCACGAGTAGTGGTCGATA+CGG 0.602432 3:+39064631 MsG0380013478.01.T01:CDS
ACTAGAGCCACCAAAACCAC+TGG 0.602513 3:-39064722 None:intergenic
ATGTTTGGCAGCACGAGTAG+TGG 0.602744 3:+39064622 MsG0380013478.01.T01:CDS
TGATAGGAACATGCTAAAGG+AGG 0.604402 3:+39062035 MsG0380013478.01.T01:intron
GCGAGGCTACTGTGACGGAT+CGG 0.606765 3:-39058825 None:intergenic
GTCGAGCCAGAACAGGAACT+GGG 0.607112 3:+39060262 MsG0380013478.01.T01:CDS
TCTGGACGAACAGGACGTGC+CGG 0.607192 3:+39063167 MsG0380013478.01.T01:CDS
GATCCTCTTCCATATTCTCA+CGG 0.609174 3:+39058772 MsG0380013478.01.T01:CDS
CACTCGTCGCTGGTATCTCG+TGG 0.615470 3:+39058921 MsG0380013478.01.T01:CDS
CACGAGATACCAGCGACGAG+TGG 0.616193 3:-39058920 None:intergenic
AAGGGGTTCACTGAAACTGA+AGG 0.617851 3:+39060671 MsG0380013478.01.T01:CDS
TTGTGAAATATCTCCATGCA+AGG 0.620343 3:-39062138 None:intergenic
AAAACGGATAAATACGGTGG+TGG 0.622200 3:+39064784 MsG0380013478.01.T01:CDS
GCTGATCAGATGCTTCAAGT+AGG 0.623573 3:+39060720 MsG0380013478.01.T01:CDS
ACAAGGCGAGGCTACTGTGA+CGG 0.623835 3:-39058830 None:intergenic
GAAATAATTAGTCTTTATGG+GGG 0.625340 3:+39060561 MsG0380013478.01.T01:CDS
GATGATGGTTGCGGTGTCAG+TGG 0.625689 3:+39058981 MsG0380013478.01.T01:CDS
GGTCGATACGGCTCTTCGGG+AGG 0.630819 3:+39064643 MsG0380013478.01.T01:CDS
AGCGACGAGTGGAAGTTCAA+CGG 0.634902 3:-39058909 None:intergenic
AGTTCAAGGAAGTCAGGAGG+GGG 0.635455 3:+39064742 MsG0380013478.01.T01:CDS
GTTGACGGCGGAGGACAACA+AGG 0.641610 3:-39058847 None:intergenic
CGGCGGAGGACAACAAGGCG+AGG 0.646634 3:-39058842 None:intergenic
CCACACAGAAAATCAATCCA+GGG 0.652678 3:+39063214 MsG0380013478.01.T01:CDS
TCAACGGCAAAGTAGGAGAG+AGG 0.655288 3:+39058865 MsG0380013478.01.T01:CDS
TCTAGTTCAAGGAAGTCAGG+AGG 0.658828 3:+39064739 MsG0380013478.01.T01:CDS
AATGGCTATGGGAAATCCAG+TGG 0.659955 3:+39064706 MsG0380013478.01.T01:CDS
AGTGGCGTAGATATTGTAGT+CGG 0.661840 3:+39060618 MsG0380013478.01.T01:CDS
AAGAGATCGTGAATGCGTTG+GGG 0.664904 3:+39059042 MsG0380013478.01.T01:CDS
TCAAGTAGGATTTCAAGAAG+CGG 0.666197 3:+39060734 MsG0380013478.01.T01:CDS
ACGGATCGGAAGTTGTTCAA+CGG 0.672422 3:-39058811 None:intergenic
GGTGCTAACACCAAAGCCAG+AGG 0.679712 3:-39060480 None:intergenic
TAGTTCAAGGAAGTCAGGAG+GGG 0.687822 3:+39064741 MsG0380013478.01.T01:CDS
TGCTGTGGATTACGATCACG+CGG 0.719875 3:+39058953 MsG0380013478.01.T01:CDS
GATCGGAAGTTGTTCAACGG+TGG 0.720537 3:-39058808 None:intergenic
GGTAAAACGGATAAATACGG+TGG 0.734116 3:+39064781 MsG0380013478.01.T01:CDS
CGTTGGATGTAAATTCACAG+AGG 0.770685 3:+39063259 MsG0380013478.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAAAATAATAACAAAAT+CGG - Chr3:39059185-39059204 None:intergenic 10.0%
!!! CATTACTTTATATATTTTTT+TGG + Chr3:39061477-39061496 MsG0380013478.01.T01:intron 10.0%
!!! TATATTTTGATTATATTTGT+GGG + Chr3:39061377-39061396 MsG0380013478.01.T01:intron 10.0%
!!! TTTTTATAATTTCAAAAGTT+TGG + Chr3:39059823-39059842 MsG0380013478.01.T01:intron 10.0%
!! AAAACTAAAATTTCATTTGA+AGG - Chr3:39061424-39061443 None:intergenic 15.0%
!! AAACTAAAATTTCATTTGAA+GGG - Chr3:39061423-39061442 None:intergenic 15.0%
!! ATTAAGTTTAATGCTAAAAA+TGG + Chr3:39060324-39060343 MsG0380013478.01.T01:CDS 15.0%
!! ATTGAGTAAATAAAGATAAA+GGG + Chr3:39059318-39059337 MsG0380013478.01.T01:intron 15.0%
!! ATTTATATTATGAAAGCTAA+AGG - Chr3:39063738-39063757 None:intergenic 15.0%
!! GTACCTTTAATTAAAAAAAA+TGG - Chr3:39061097-39061116 None:intergenic 15.0%
!! TAAGCATGTTAAAAAAATAT+AGG + Chr3:39061289-39061308 MsG0380013478.01.T01:intron 15.0%
!! TAATTAAAAAAAATGGTGTA+GGG - Chr3:39061090-39061109 None:intergenic 15.0%
!! TACATTTCTTTGTAAAAATA+TGG + Chr3:39062596-39062615 MsG0380013478.01.T01:intron 15.0%
!! TACTATTACGAAAATAAAAT+TGG - Chr3:39063872-39063891 None:intergenic 15.0%
!! TCATGAGAAAAAATATAATA+TGG - Chr3:39061785-39061804 None:intergenic 15.0%
!! TCTGAATAAAAAATATCATT+TGG - Chr3:39060934-39060953 None:intergenic 15.0%
!! TTAAGTTTAATGCTAAAAAT+GGG + Chr3:39060325-39060344 MsG0380013478.01.T01:CDS 15.0%
!! TTAATTAAAAAAAATGGTGT+AGG - Chr3:39061091-39061110 None:intergenic 15.0%
!! TTTATAAATAATTCATGAAC+AGG + Chr3:39059869-39059888 MsG0380013478.01.T01:intron 15.0%
!!! ACACCATTTTTTTTAATTAA+AGG + Chr3:39061091-39061110 MsG0380013478.01.T01:intron 15.0%
!!! ATATTTTTTCTCATGATTTT+TGG + Chr3:39061789-39061808 MsG0380013478.01.T01:intron 15.0%
!!! GTATATTTTGATTATATTTG+TGG + Chr3:39061376-39061395 MsG0380013478.01.T01:intron 15.0%
!!! TATTTTTTCTCATGATTTTT+GGG + Chr3:39061790-39061809 MsG0380013478.01.T01:intron 15.0%
!!! TTTAGCTTTCATAATATAAA+TGG + Chr3:39063737-39063756 MsG0380013478.01.T01:intron 15.0%
!! AATTATAAAACATAGTGATC+AGG - Chr3:39064522-39064541 None:intergenic 20.0%
!! ACAAATATCTCTGAATTATT+TGG - Chr3:39063140-39063159 None:intergenic 20.0%
!! AGATTTGATGTATATATCTT+AGG + Chr3:39061653-39061672 MsG0380013478.01.T01:intron 20.0%
!! ATTATAAAACATAGTGATCA+GGG - Chr3:39064521-39064540 None:intergenic 20.0%
!! CAAATAAGAAACAACTTAAA+AGG - Chr3:39062761-39062780 None:intergenic 20.0%
!! GAGAATGAATAAAACTTTAT+CGG + Chr3:39063807-39063826 MsG0380013478.01.T01:intron 20.0%
!! GATTGAGTAAATAAAGATAA+AGG + Chr3:39059317-39059336 MsG0380013478.01.T01:intron 20.0%
!! GGAAAGTTCAAATTAAAAAA+TGG - Chr3:39062699-39062718 None:intergenic 20.0%
!! GTAGATAATAATATTTGAGA+TGG + Chr3:39061614-39061633 MsG0380013478.01.T01:intron 20.0%
!! TTAAAAAAAAATGTTCCTGT+AGG + Chr3:39062661-39062680 MsG0380013478.01.T01:intron 20.0%
!! TTAATAATCTTATCCAAGAT+GGG - Chr3:39060309-39060328 None:intergenic 20.0%
!! TTACAAAGAAATGTATGTAT+TGG - Chr3:39062591-39062610 None:intergenic 20.0%
!!! AAAATTTTGTAACATCTACT+AGG - Chr3:39059269-39059288 None:intergenic 20.0%
!!! AATTTTTTTGTGGTTGATTA+TGG + Chr3:39060441-39060460 MsG0380013478.01.T01:intron 20.0%
!!! ACAATCATTATATTTTACCA+CGG + Chr3:39063474-39063493 MsG0380013478.01.T01:intron 20.0%
!!! AGAAAATCGTTTTTAATTGA+AGG + Chr3:39059783-39059802 MsG0380013478.01.T01:intron 20.0%
!!! AGTTTTATTCATTCTCAAAA+AGG - Chr3:39063803-39063822 None:intergenic 20.0%
!!! ATTTTATTGGTACATAAACT+AGG - Chr3:39059634-39059653 None:intergenic 20.0%
!!! CTAACTATTCAATTTTTTTG+TGG + Chr3:39060431-39060450 MsG0380013478.01.T01:intron 20.0%
!!! TGGAAATAATTAGTCTTTAT+GGG + Chr3:39060559-39060578 MsG0380013478.01.T01:CDS 20.0%
!!! TGTTTCAGTAAATATTTTTC+TGG + Chr3:39061451-39061470 MsG0380013478.01.T01:intron 20.0%
!!! TTGGAAATAATTAGTCTTTA+TGG + Chr3:39060558-39060577 MsG0380013478.01.T01:CDS 20.0%
!!! TTTAAGTTGTTTCTTATTTG+AGG + Chr3:39062761-39062780 MsG0380013478.01.T01:intron 20.0%
!!! TTTTACTAGCTTATTAGTAA+AGG + Chr3:39059210-39059229 MsG0380013478.01.T01:intron 20.0%
! AAAAATAAACCAATCCAAAC+AGG + Chr3:39059523-39059542 MsG0380013478.01.T01:intron 25.0%
! AAAATATATACGCAAGAGTA+AGG - Chr3:39059749-39059768 None:intergenic 25.0%
! AAATATATACGCAAGAGTAA+GGG - Chr3:39059748-39059767 None:intergenic 25.0%
! AAATTAAACCATACCTGAAT+GGG - Chr3:39059092-39059111 None:intergenic 25.0%
! AATAACGAATTGAGTAACAA+TGG - Chr3:39063068-39063087 None:intergenic 25.0%
! AATATAAGATGCATACGAAA+AGG - Chr3:39063299-39063318 None:intergenic 25.0%
! AATTATACCTTGTAAGCTAT+TGG + Chr3:39063927-39063946 MsG0380013478.01.T01:intron 25.0%
! ACTTACAAGATCAATTGTTA+AGG - Chr3:39060865-39060884 None:intergenic 25.0%
! AGACTAATTATTTCCAAGTT+AGG - Chr3:39060555-39060574 None:intergenic 25.0%
! ATCGAATAACAGTTTGATAA+AGG - Chr3:39064320-39064339 None:intergenic 25.0%
! ATGACATACTAATAACAACA+TGG - Chr3:39063441-39063460 None:intergenic 25.0%
! ATTAGTATGTCATAGAATCA+TGG + Chr3:39063448-39063467 MsG0380013478.01.T01:intron 25.0%
! ATTATCTTAGATCGTTTCAA+AGG + Chr3:39063656-39063675 MsG0380013478.01.T01:intron 25.0%
! ATTATGTGATTATTTGACCT+TGG + Chr3:39063085-39063104 MsG0380013478.01.T01:intron 25.0%
! ATTTATCCTCATAAAACCTT+TGG - Chr3:39060984-39061003 None:intergenic 25.0%
! CAAACTGTTATTCGATAAAT+GGG + Chr3:39064324-39064343 MsG0380013478.01.T01:intron 25.0%
! CAATTAACAAAATCTTCTTG+AGG + Chr3:39061057-39061076 MsG0380013478.01.T01:intron 25.0%
! CACAAAAGTTGTTATAAGAA+TGG - Chr3:39062505-39062524 None:intergenic 25.0%
! CATCAAGCAAATAAATTGTA+CGG - Chr3:39061527-39061546 None:intergenic 25.0%
! CCTAACAAAAGCTTAATATT+TGG + Chr3:39061013-39061032 MsG0380013478.01.T01:intron 25.0%
! CTTAATAATCTTATCCAAGA+TGG - Chr3:39060310-39060329 None:intergenic 25.0%
! CTTACAAGATCAATTGTTAA+GGG - Chr3:39060864-39060883 None:intergenic 25.0%
! GAAAATAAAATTGGCCAATA+TGG - Chr3:39063863-39063882 None:intergenic 25.0%
! TAAAAATATGGTTGTCACAT+AGG + Chr3:39062608-39062627 MsG0380013478.01.T01:intron 25.0%
! TACATAAAATGACATTCCAA+TGG + Chr3:39064350-39064369 MsG0380013478.01.T01:intron 25.0%
! TCAAACTGTTATTCGATAAA+TGG + Chr3:39064323-39064342 MsG0380013478.01.T01:intron 25.0%
! TCATAATATAAATGGTGAGT+GGG + Chr3:39063745-39063764 MsG0380013478.01.T01:intron 25.0%
! TCTAGTATCATGCTTATAAA+CGG - Chr3:39064211-39064230 None:intergenic 25.0%
! TGTTATTGATCTTCTCAAAA+GGG + Chr3:39060653-39060672 MsG0380013478.01.T01:CDS 25.0%
! TTAAATGTAAAATAACACCG+TGG - Chr3:39063494-39063513 None:intergenic 25.0%
! TTCATAATATAAATGGTGAG+TGG + Chr3:39063744-39063763 MsG0380013478.01.T01:intron 25.0%
! TTGATGTATATATCTTAGGT+TGG + Chr3:39061657-39061676 MsG0380013478.01.T01:intron 25.0%
! TTTATTGGATAGTTAGTAAG+AGG + Chr3:39064079-39064098 MsG0380013478.01.T01:intron 25.0%
!! AATTGGAATTTGTTTCTTGA+TGG - Chr3:39061042-39061061 None:intergenic 25.0%
!! ATCTTTGTTGTAAGATTTCA+AGG + Chr3:39063987-39064006 MsG0380013478.01.T01:intron 25.0%
!! CCAAATATTAAGCTTTTGTT+AGG - Chr3:39061016-39061035 None:intergenic 25.0%
!! CTCAAGAAGATTTTGTTAAT+TGG - Chr3:39061059-39061078 None:intergenic 25.0%
!! CTGGATTTGATTAAGATTTT+CGG - Chr3:39063538-39063557 None:intergenic 25.0%
!! TAAGTATGCAAATCTGTTTT+GGG + Chr3:39060880-39060899 MsG0380013478.01.T01:intron 25.0%
!! TTACTCTTGCGTATATATTT+TGG + Chr3:39059748-39059767 MsG0380013478.01.T01:intron 25.0%
!!! AAACAGCTATTTCAATGTTT+TGG + Chr3:39062193-39062212 MsG0380013478.01.T01:CDS 25.0%
!!! AATCGTTTTTAATTGAAGGT+TGG + Chr3:39059787-39059806 MsG0380013478.01.T01:intron 25.0%
!!! AGTTCTCATTTTAACCAAAT+TGG + Chr3:39064278-39064297 MsG0380013478.01.T01:intron 25.0%
!!! CTTATATTTTTTACTCGAAG+TGG + Chr3:39063311-39063330 MsG0380013478.01.T01:intron 25.0%
!!! GAAATAATTAGTCTTTATGG+GGG + Chr3:39060561-39060580 MsG0380013478.01.T01:CDS 25.0%
!!! GGAAATAATTAGTCTTTATG+GGG + Chr3:39060560-39060579 MsG0380013478.01.T01:CDS 25.0%
AAAAAAAAGCCAATCCATAC+CGG - Chr3:39059344-39059363 None:intergenic 30.0%
AAACTAGGACAATAGTCATT+GGG - Chr3:39059619-39059638 None:intergenic 30.0%
AAATTGGCCAATATGGAAAA+TGG - Chr3:39063856-39063875 None:intergenic 30.0%
AAGCATTCAACAATTCATCA+TGG + Chr3:39062938-39062957 MsG0380013478.01.T01:intron 30.0%
AATTGCTAACTCTAACTAAC+TGG - Chr3:39062862-39062881 None:intergenic 30.0%
ACATTCTACAATTCTCCTAT+AGG + Chr3:39062905-39062924 MsG0380013478.01.T01:intron 30.0%
AGTAAAGGATCAGAAAGTAA+TGG + Chr3:39059225-39059244 MsG0380013478.01.T01:intron 30.0%
AGTAAATAAAGATAAAGGGC+CGG + Chr3:39059322-39059341 MsG0380013478.01.T01:intron 30.0%
AGTTGGTTATTATGATCATG+AGG + Chr3:39064230-39064249 MsG0380013478.01.T01:intron 30.0%
ATAAAATGACATTCCAATGG+TGG + Chr3:39064353-39064372 MsG0380013478.01.T01:intron 30.0%
ATCTACCAACCAGAAAAATA+AGG - Chr3:39060399-39060418 None:intergenic 30.0%
ATCTCAAATATATTCTCGAC+AGG - Chr3:39062406-39062425 None:intergenic 30.0%
ATCTTACAACAAAGATCTTC+TGG - Chr3:39063983-39064002 None:intergenic 30.0%
ATCTTTAGTAGCTTATATGC+TGG + Chr3:39063631-39063650 MsG0380013478.01.T01:intron 30.0%
ATGCTTAACTCTGCATTTAT+CGG - Chr3:39061276-39061295 None:intergenic 30.0%
ATTATATTTGTGGGTTTCAC+TGG + Chr3:39061386-39061405 MsG0380013478.01.T01:intron 30.0%
ATTTAAGCACAATACTTCAC+TGG - Chr3:39063592-39063611 None:intergenic 30.0%
ATTTATCATGAAACATGAGC+TGG - Chr3:39063416-39063435 None:intergenic 30.0%
CAATAATAAATGTCCACCAT+TGG - Chr3:39064369-39064388 None:intergenic 30.0%
CACATAGGTTGTCATAAAAA+TGG + Chr3:39062623-39062642 MsG0380013478.01.T01:intron 30.0%
CCAAAAATTCTAAACTGTGT+TGG + Chr3:39064016-39064035 MsG0380013478.01.T01:intron 30.0%
GAAATTAAACCATACCTGAA+TGG - Chr3:39059093-39059112 None:intergenic 30.0%
GAACTTACAAGATCAACATT+TGG - Chr3:39062254-39062273 None:intergenic 30.0%
GGACATTTATTATTGATCTC+TGG + Chr3:39064374-39064393 MsG0380013478.01.T01:intron 30.0%
GTAAGATTCTTTATCCAAGA+AGG - Chr3:39060822-39060841 None:intergenic 30.0%
GTTATTGATCTTCTCAAAAG+GGG + Chr3:39060654-39060673 MsG0380013478.01.T01:CDS 30.0%
GTTTAATGCTAAAAATGGGT+TGG + Chr3:39060329-39060348 MsG0380013478.01.T01:intron 30.0%
TAAACTAGGACAATAGTCAT+TGG - Chr3:39059620-39059639 None:intergenic 30.0%
TATAAGCATGATACTAGAGT+TGG + Chr3:39064213-39064232 MsG0380013478.01.T01:intron 30.0%
TCTGGTAAAACGGATAAATA+CGG + Chr3:39064778-39064797 MsG0380013478.01.T01:CDS 30.0%
TGATCGTCTATCACATATAA+TGG + Chr3:39062094-39062113 MsG0380013478.01.T01:CDS 30.0%
TTAATGATCTATCCTCTGAT+AGG + Chr3:39062019-39062038 MsG0380013478.01.T01:intron 30.0%
TTCATAATGTATTACCTGTG+AGG - Chr3:39063114-39063133 None:intergenic 30.0%
TTCCAAATATTTGAGTGAGA+AGG + Chr3:39062715-39062734 MsG0380013478.01.T01:intron 30.0%
TTGGTTAAAATGAGAACTCA+TGG - Chr3:39064276-39064295 None:intergenic 30.0%
! ACAAGTTGAAAAGGAATTCA+AGG + Chr3:39060521-39060540 MsG0380013478.01.T01:CDS 30.0%
! CAATTGTTAAGGGTTTGTTT+AGG - Chr3:39060854-39060873 None:intergenic 30.0%
! CTGAAGTTCTCAACTTTTAT+TGG + Chr3:39064064-39064083 MsG0380013478.01.T01:intron 30.0%
! GTAAGTATGCAAATCTGTTT+TGG + Chr3:39060879-39060898 MsG0380013478.01.T01:intron 30.0%
! GTGTTATTGATCTTCTCAAA+AGG + Chr3:39060652-39060671 MsG0380013478.01.T01:CDS 30.0%
! TACTTGTCCATTTTCCATAT+TGG + Chr3:39063846-39063865 MsG0380013478.01.T01:intron 30.0%
!! AAGAATTCCTGCTTTAGAAT+AGG - Chr3:39061739-39061758 None:intergenic 30.0%
!! ATATTTTTGTCCGTTGAGTT+AGG - Chr3:39059565-39059584 None:intergenic 30.0%
!! ATTTGAGCCTCTTTTAAGTA+AGG + Chr3:39059707-39059726 MsG0380013478.01.T01:intron 30.0%
!! CCAACACAGTTTAGAATTTT+TGG - Chr3:39064019-39064038 None:intergenic 30.0%
!! GAAGTATTGTGCTTAAATTG+AGG + Chr3:39063594-39063613 MsG0380013478.01.T01:intron 30.0%
!! TGAGGAATTTTCTGGTAAAA+CGG + Chr3:39064768-39064787 MsG0380013478.01.T01:CDS 30.0%
!! TGAGTCTTGTCTCAATTTTT+AGG + Chr3:39064106-39064125 MsG0380013478.01.T01:intron 30.0%
!! TTGCTAATTTGTTGCTGAAT+AGG - Chr3:39060591-39060610 None:intergenic 30.0%
!! TTGTCTCAATTTTTAGGAAC+TGG + Chr3:39064112-39064131 MsG0380013478.01.T01:intron 30.0%
!! TTTGAGCCTCTTTTAAGTAA+GGG + Chr3:39059708-39059727 MsG0380013478.01.T01:intron 30.0%
!!! ATTCTGTAGCCTTATTTTTC+TGG + Chr3:39060387-39060406 MsG0380013478.01.T01:intron 30.0%
AAAAAATGTTCCTGTAGGTG+TGG + Chr3:39062666-39062685 MsG0380013478.01.T01:intron 35.0%
AAAAATGTTCCTGTAGGTGT+GGG + Chr3:39062667-39062686 MsG0380013478.01.T01:intron 35.0%
AACTATCCAGAAACAAGGAA+TGG - Chr3:39062326-39062345 None:intergenic 35.0%
AAGTATAGTGACAAGATTGC+AGG - Chr3:39061987-39062006 None:intergenic 35.0%
AATAGCAGTTCCTTTCTTAC+CGG - Chr3:39063189-39063208 None:intergenic 35.0%
AATATAAATGGTGAGTGGGA+GGG + Chr3:39063749-39063768 MsG0380013478.01.T01:intron 35.0%
ACACATGAATCCAAGTTTGA+TGG + Chr3:39063703-39063722 MsG0380013478.01.T01:intron 35.0%
AGTATAGTGACAAGATTGCA+GGG - Chr3:39061986-39062005 None:intergenic 35.0%
ATAAGAGTTTGACGCTTAGA+AGG - Chr3:39060783-39060802 None:intergenic 35.0%
ATATATTCTCGACAGGTCAT+AGG - Chr3:39062399-39062418 None:intergenic 35.0%
CAAATTAGCAAACTTGGTAG+TGG + Chr3:39060600-39060619 MsG0380013478.01.T01:CDS 35.0%
CAATCAACTATCCAGAAACA+AGG - Chr3:39062331-39062350 None:intergenic 35.0%
CACATGAATCCAAGTTTGAT+GGG + Chr3:39063704-39063723 MsG0380013478.01.T01:intron 35.0%
CAGATATAGAAAACACAGAC+TGG - Chr3:39063557-39063576 None:intergenic 35.0%
CAGCAACAAATTAGCAAACT+TGG + Chr3:39060594-39060613 MsG0380013478.01.T01:CDS 35.0%
CAGCACTAGTAAGTATGAAT+TGG - Chr3:39060139-39060158 None:intergenic 35.0%
CTCCTTCTCACTCAAATATT+TGG - Chr3:39062720-39062739 None:intergenic 35.0%
GAGATATTTGTTCATCGATC+TGG + Chr3:39063149-39063168 MsG0380013478.01.T01:CDS 35.0%
GGAAAATGGACAAGTATTAC+TGG - Chr3:39063842-39063861 None:intergenic 35.0%
TAATATAAATGGTGAGTGGG+AGG + Chr3:39063748-39063767 MsG0380013478.01.T01:intron 35.0%
TCAAACATGTGTGTAAAGCA+TGG - Chr3:39064148-39064167 None:intergenic 35.0%
TCAAGTAGGATTTCAAGAAG+CGG + Chr3:39060734-39060753 MsG0380013478.01.T01:CDS 35.0%
TCAATTGTGTGCTACCAATT+TGG - Chr3:39064295-39064314 None:intergenic 35.0%
TGAAACATGAGCTGGATTTA+TGG - Chr3:39063408-39063427 None:intergenic 35.0%
TGATTATGGCAGCAAAAGAA+GGG + Chr3:39060455-39060474 MsG0380013478.01.T01:intron 35.0%
TGCTTAACTCTGCATTTATC+GGG - Chr3:39061275-39061294 None:intergenic 35.0%
TGGAGTCTTACTGTTATAAG+AGG - Chr3:39061765-39061784 None:intergenic 35.0%
TGGTTATTATGATCATGAGG+TGG + Chr3:39064233-39064252 MsG0380013478.01.T01:intron 35.0%
TTGATTATGGCAGCAAAAGA+AGG + Chr3:39060454-39060473 MsG0380013478.01.T01:intron 35.0%
TTGTGAAATATCTCCATGCA+AGG - Chr3:39062141-39062160 None:intergenic 35.0%
TTGTTAACTACATACGACCA+TGG + Chr3:39062429-39062448 MsG0380013478.01.T01:intron 35.0%
! AAGTTTAGCTCAGGTAAATC+TGG + Chr3:39064844-39064863 MsG0380013478.01.T01:CDS 35.0%
! AGACAGAATATGCTAGTTTC+TGG - Chr3:39061190-39061209 None:intergenic 35.0%
! AGTTAGGACTAGTAGACTTT+GGG - Chr3:39059549-39059568 None:intergenic 35.0%
! AGTTTAGCTCAGGTAAATCT+GGG + Chr3:39064845-39064864 MsG0380013478.01.T01:CDS 35.0%
! TGTTTATTCGCAGCGTTTTT+AGG + Chr3:39060109-39060128 MsG0380013478.01.T01:intron 35.0%
!! CAGCTATTTCAATGTTTTGG+TGG + Chr3:39062196-39062215 MsG0380013478.01.T01:CDS 35.0%
!! CTAATTTGTTGCTAGACACA+TGG + Chr3:39063364-39063383 MsG0380013478.01.T01:intron 35.0%
!! TCTAATGCCTATTCTAAAGC+AGG + Chr3:39061729-39061748 MsG0380013478.01.T01:CDS 35.0%
!! TGTTTCTGGATAGTTGATTG+AGG + Chr3:39062331-39062350 MsG0380013478.01.T01:intron 35.0%
!! TTGAGCCTCTTTTAAGTAAG+GGG + Chr3:39059709-39059728 MsG0380013478.01.T01:intron 35.0%
!!! TGTAGCCTTATTTTTCTGGT+TGG + Chr3:39060391-39060410 MsG0380013478.01.T01:intron 35.0%
AAAAATCCGCCAAGCTACAA+TGG - Chr3:39061324-39061343 None:intergenic 40.0%
AAAACGGATAAATACGGTGG+TGG + Chr3:39064784-39064803 MsG0380013478.01.T01:CDS 40.0%
AAAGAGATCGTGAATGCGTT+GGG + Chr3:39059041-39059060 MsG0380013478.01.T01:CDS 40.0%
AAGACAATTGAGAGAGACGT+TGG + Chr3:39063242-39063261 MsG0380013478.01.T01:CDS 40.0%
ACAACAAAGATCTTCTGGTC+TGG - Chr3:39063978-39063997 None:intergenic 40.0%
ACAAGTAAGATGCAAGCAGT+TGG - Chr3:39064554-39064573 None:intergenic 40.0%
AGAAGATCAATAACACGTCC+AGG - Chr3:39060648-39060667 None:intergenic 40.0%
AGTGGCGTAGATATTGTAGT+CGG + Chr3:39060618-39060637 MsG0380013478.01.T01:CDS 40.0%
ATAAAGATAAAGGGCCGGTA+TGG + Chr3:39059327-39059346 MsG0380013478.01.T01:intron 40.0%
ATAATAACAGACACACGCAC+AGG - Chr3:39060040-39060059 None:intergenic 40.0%
ATAGATCCAAGTGTGTGGTA+AGG + Chr3:39059683-39059702 MsG0380013478.01.T01:intron 40.0%
ATATAAATGGTGAGTGGGAG+GGG + Chr3:39063750-39063769 MsG0380013478.01.T01:intron 40.0%
CAAATTCCTTACCACACACT+TGG - Chr3:39059692-39059711 None:intergenic 40.0%
CAATGATAGATCCAAGTGTG+TGG + Chr3:39059678-39059697 MsG0380013478.01.T01:intron 40.0%
CACACACTTGGATCTATCAT+TGG - Chr3:39059680-39059699 None:intergenic 40.0%
CAGAGAGAAAGAACTCTTAC+TGG + Chr3:39062164-39062183 MsG0380013478.01.T01:CDS 40.0%
CCACACAGAAAATCAATCCA+GGG + Chr3:39063214-39063233 MsG0380013478.01.T01:CDS 40.0%
CCACTTTCAACAGCAATCTT+TGG - Chr3:39064592-39064611 None:intergenic 40.0%
CGTCAATCAAGTAGTAGTTC+TGG + Chr3:39064673-39064692 MsG0380013478.01.T01:CDS 40.0%
CGTTGGATGTAAATTCACAG+AGG + Chr3:39063259-39063278 MsG0380013478.01.T01:CDS 40.0%
CTCAATTGTCTTTACATCCC+TGG - Chr3:39063234-39063253 None:intergenic 40.0%
CTCTGATAGGAACATGCTAA+AGG + Chr3:39062032-39062051 MsG0380013478.01.T01:intron 40.0%
CTTTAGCATGTTCCTATCAG+AGG - Chr3:39062034-39062053 None:intergenic 40.0%
GATCCTCTTCCATATTCTCA+CGG + Chr3:39058772-39058791 MsG0380013478.01.T01:CDS 40.0%
GCGCTTCTATGCTAACATTT+AGG + Chr3:39064494-39064513 MsG0380013478.01.T01:intron 40.0%
GCGTCAAACTCTTATGTTCT+CGG + Chr3:39060788-39060807 MsG0380013478.01.T01:CDS 40.0%
GGTAAAACGGATAAATACGG+TGG + Chr3:39064781-39064800 MsG0380013478.01.T01:CDS 40.0%
GTCTACTAGTCCTAACTCAA+CGG + Chr3:39059552-39059571 MsG0380013478.01.T01:intron 40.0%
GTTTAGTAGCCCATCAAACT+TGG - Chr3:39063716-39063735 None:intergenic 40.0%
TAAAGAGATCGTGAATGCGT+TGG + Chr3:39059040-39059059 MsG0380013478.01.T01:CDS 40.0%
TAGTTAGCATTGCCTACACT+AGG - Chr3:39062825-39062844 None:intergenic 40.0%
TATTACCTGTGAGGAAACCA+AGG - Chr3:39063105-39063124 None:intergenic 40.0%
TATTCAGATTGTGCCTAGTC+TGG + Chr3:39060946-39060965 MsG0380013478.01.T01:intron 40.0%
TCAGGTAAATCTGGGAGATA+TGG + Chr3:39064853-39064872 MsG0380013478.01.T01:CDS 40.0%
TCCACACAGAAAATCAATCC+AGG + Chr3:39063213-39063232 MsG0380013478.01.T01:CDS 40.0%
TGATAGGAACATGCTAAAGG+AGG + Chr3:39062035-39062054 MsG0380013478.01.T01:intron 40.0%
TGCTTAGAAGAAGCTCCTAT+AGG - Chr3:39062923-39062942 None:intergenic 40.0%
TGCTTGGAAGTGATCTCAAA+AGG + Chr3:39064041-39064060 MsG0380013478.01.T01:intron 40.0%
TGGAGATTCTGATCAGAAGT+TGG + Chr3:39061677-39061696 MsG0380013478.01.T01:CDS 40.0%
TGGATGTAAATTCACAGAGG+TGG + Chr3:39063262-39063281 MsG0380013478.01.T01:intron 40.0%
TGGATTTCCCATAGCCATTT+CGG - Chr3:39064705-39064724 None:intergenic 40.0%
TTTATTGTAGAGAGCTGTGC+TGG + Chr3:39060209-39060228 MsG0380013478.01.T01:intron 40.0%
! ACTGGGAAAACTCTTGCTTT+TGG + Chr3:39060279-39060298 MsG0380013478.01.T01:CDS 40.0%
! ACTTGCACGACAAGTTGAAA+AGG + Chr3:39060512-39060531 MsG0380013478.01.T01:CDS 40.0%
! CCAAAGATTGCTGTTGAAAG+TGG + Chr3:39064589-39064608 MsG0380013478.01.T01:CDS 40.0%
! GAGTTAGGACTAGTAGACTT+TGG - Chr3:39059550-39059569 None:intergenic 40.0%
! GCCTAGTCTGGTAATGATAT+GGG + Chr3:39060958-39060977 MsG0380013478.01.T01:intron 40.0%
! TATGGGAAATCCAGTGGTTT+TGG + Chr3:39064712-39064731 MsG0380013478.01.T01:CDS 40.0%
! TCACTTCCATTCCTTGTTTC+TGG + Chr3:39062317-39062336 MsG0380013478.01.T01:intron 40.0%
! TGCCTAGTCTGGTAATGATA+TGG + Chr3:39060957-39060976 MsG0380013478.01.T01:intron 40.0%
!! ATGCAAATCTGTTTTGGGCA+TGG + Chr3:39060885-39060904 MsG0380013478.01.T01:intron 40.0%
!! CTAAACTGTGTTGGTTTGCT+TGG + Chr3:39064025-39064044 MsG0380013478.01.T01:intron 40.0%
!! CTCTTTTAAGTAAGGGGTCA+GGG + Chr3:39059715-39059734 MsG0380013478.01.T01:intron 40.0%
!! CTGGGAAAACTCTTGCTTTT+GGG + Chr3:39060280-39060299 MsG0380013478.01.T01:CDS 40.0%
!! GGCAAAAAGCATTAAATGCG+AGG + Chr3:39062115-39062134 MsG0380013478.01.T01:CDS 40.0%
!! TATGGGCCAAAGGTTTTATG+AGG + Chr3:39060975-39060994 MsG0380013478.01.T01:intron 40.0%
!! TCAAGTAGTAGTTCTGGATC+TGG + Chr3:39064679-39064698 MsG0380013478.01.T01:CDS 40.0%
!! TCTTTTAAGTAAGGGGTCAG+GGG + Chr3:39059716-39059735 MsG0380013478.01.T01:intron 40.0%
!! TTGATCTCTGGTGTTGATTG+TGG + Chr3:39064386-39064405 MsG0380013478.01.T01:intron 40.0%
!!! TTGTAGCTTGGCGGATTTTT+AGG + Chr3:39061324-39061343 MsG0380013478.01.T01:intron 40.0%
AACTACATACGACCATGGTG+TGG + Chr3:39062434-39062453 MsG0380013478.01.T01:intron 45.0%
AAGAGATCGTGAATGCGTTG+GGG + Chr3:39059042-39059061 MsG0380013478.01.T01:CDS 45.0%
AAGGGGTTCACTGAAACTGA+AGG + Chr3:39060671-39060690 MsG0380013478.01.T01:CDS 45.0%
AATGGCTATGGGAAATCCAG+TGG + Chr3:39064706-39064725 MsG0380013478.01.T01:CDS 45.0%
ACCTTGTAAGCTATTGGTGC+TGG + Chr3:39063933-39063952 MsG0380013478.01.T01:intron 45.0%
ACGGATCGGAAGTTGTTCAA+CGG - Chr3:39058814-39058833 None:intergenic 45.0%
AGCTCTTTCCCATTCAGGTA+TGG + Chr3:39059081-39059100 MsG0380013478.01.T01:intron 45.0%
AGTGGATCAGCAGACATGTT+TGG + Chr3:39064607-39064626 MsG0380013478.01.T01:CDS 45.0%
ATGCAAGGGAGGGATATGAT+TGG + Chr3:39060240-39060259 MsG0380013478.01.T01:CDS 45.0%
ATTAAATGCGAGGCCTTGCA+TGG + Chr3:39062125-39062144 MsG0380013478.01.T01:CDS 45.0%
CCAAGCTACAATGGTCTACA+TGG - Chr3:39061315-39061334 None:intergenic 45.0%
CCATGTAGACCATTGTAGCT+TGG + Chr3:39061312-39061331 MsG0380013478.01.T01:intron 45.0%
CCTGACCCCTTACTTAAAAG+AGG - Chr3:39059717-39059736 None:intergenic 45.0%
CTAGTTCAAGGAAGTCAGGA+GGG + Chr3:39064740-39064759 MsG0380013478.01.T01:CDS 45.0%
CTGCATTTATCGGGTAGACA+GGG - Chr3:39061266-39061285 None:intergenic 45.0%
GAAGAAACGCCGTGAGAATA+TGG - Chr3:39058784-39058803 None:intergenic 45.0%
GCCCATATCATTACCAGACT+AGG - Chr3:39060962-39060981 None:intergenic 45.0%
GCTAAACTTTCCAAAGCCAC+TGG - Chr3:39064833-39064852 None:intergenic 45.0%
GCTGATCAGATGCTTCAAGT+AGG + Chr3:39060720-39060739 MsG0380013478.01.T01:CDS 45.0%
GCTGCGAATAAACACTGTGT+TGG - Chr3:39060103-39060122 None:intergenic 45.0%
TACTCAACTCTACCACACCA+TGG - Chr3:39062449-39062468 None:intergenic 45.0%
TAGACGATCAGCATCACGTT+TGG - Chr3:39062084-39062103 None:intergenic 45.0%
TAGTAGACTTTGGGCCTGTT+TGG - Chr3:39059540-39059559 None:intergenic 45.0%
TAGTTCAAGGAAGTCAGGAG+GGG + Chr3:39064741-39064760 MsG0380013478.01.T01:CDS 45.0%
TCCAGCACCAATAGCTTACA+AGG - Chr3:39063937-39063956 None:intergenic 45.0%
TCTGATCAGAAGTTGGCAGA+TGG + Chr3:39061684-39061703 MsG0380013478.01.T01:CDS 45.0%
TCTGCATTTATCGGGTAGAC+AGG - Chr3:39061267-39061286 None:intergenic 45.0%
TGAATGCGTTGGGGAAGAAA+GGG + Chr3:39059051-39059070 MsG0380013478.01.T01:CDS 45.0%
TGGAAATATCCCACACCTAC+AGG - Chr3:39062679-39062698 None:intergenic 45.0%
TGTAGACCATTGTAGCTTGG+CGG + Chr3:39061315-39061334 MsG0380013478.01.T01:intron 45.0%
TGTCGTGCAAGTTCTCTAGT+TGG - Chr3:39060504-39060523 None:intergenic 45.0%
TTCTCGACAGGTCATAGGAA+TGG - Chr3:39062394-39062413 None:intergenic 45.0%
TTTGACCTTGGTTTCCTCAC+AGG + Chr3:39063097-39063116 MsG0380013478.01.T01:intron 45.0%
! AGTTTTCCCAGTTCCTGTTC+TGG - Chr3:39060271-39060290 None:intergenic 45.0%
! CAACTGATGTTGCTTCTCGT+GGG + Chr3:39062219-39062238 MsG0380013478.01.T01:CDS 45.0%
! CTGGTAATGATATGGGCCAA+AGG + Chr3:39060965-39060984 MsG0380013478.01.T01:intron 45.0%
! GGGGGATTTGAGGAATTTTC+TGG + Chr3:39064760-39064779 MsG0380013478.01.T01:CDS 45.0%
! TCTAGTTCAAGGAAGTCAGG+AGG + Chr3:39064739-39064758 MsG0380013478.01.T01:CDS 45.0%
! TGTCAGTGGTGATGAAGGAT+TGG + Chr3:39058995-39059014 MsG0380013478.01.T01:CDS 45.0%
!! CCCTGGATTGATTTTCTGTG+TGG - Chr3:39063217-39063236 None:intergenic 45.0%
!! CCTCTTTTAAGTAAGGGGTC+AGG + Chr3:39059714-39059733 MsG0380013478.01.T01:intron 45.0%
!! GGCTTTGGAAAGTTTAGCTC+AGG + Chr3:39064835-39064854 MsG0380013478.01.T01:CDS 45.0%
!!! GTTTTGGTGGCTCTAGTTCA+AGG + Chr3:39064728-39064747 MsG0380013478.01.T01:CDS 45.0%
!!! TGCTTTTGGGATACCCATCT+TGG + Chr3:39060293-39060312 MsG0380013478.01.T01:CDS 45.0%
!!! ATTATTGTTATTTTTTTTTT+TGG + Chr3:39059157-39059176 MsG0380013478.01.T01:intron 5.0%
!!! TTATTGTTATTTTTTTTTTT+GGG + Chr3:39059158-39059177 MsG0380013478.01.T01:intron 5.0%
!!! TTTATCTTTATTTATTTTAT+TGG - Chr3:39059647-39059666 None:intergenic 5.0%
ACGCCGTGAGAATATGGAAG+AGG - Chr3:39058778-39058797 None:intergenic 50.0%
ACTAGAGCCACCAAAACCAC+TGG - Chr3:39064725-39064744 None:intergenic 50.0%
AGCACGAGTAGTGGTCGATA+CGG + Chr3:39064631-39064650 MsG0380013478.01.T01:CDS 50.0%
AGCAGTTCAAGTCGTTCCAG+TGG + Chr3:39064814-39064833 MsG0380013478.01.T01:CDS 50.0%
AGCGACGAGTGGAAGTTCAA+CGG - Chr3:39058912-39058931 None:intergenic 50.0%
AGTTCAAGGAAGTCAGGAGG+GGG + Chr3:39064742-39064761 MsG0380013478.01.T01:CDS 50.0%
ATATCCCTCCCTTGCATTGC+AGG - Chr3:39060237-39060256 None:intergenic 50.0%
ATGTTTGGCAGCACGAGTAG+TGG + Chr3:39064622-39064641 MsG0380013478.01.T01:CDS 50.0%
CAAGGATGCTGCACCTAACT+TGG + Chr3:39060539-39060558 MsG0380013478.01.T01:CDS 50.0%
CAGCAAAAGAAGGGATCCTC+TGG + Chr3:39060464-39060483 MsG0380013478.01.T01:intron 50.0%
CGCAAAGCTCTTTCCCATTC+AGG + Chr3:39059076-39059095 MsG0380013478.01.T01:CDS 50.0%
CTCTCCTACTTTGCCGTTGA+CGG - Chr3:39058865-39058884 None:intergenic 50.0%
GACTTTGGGCCTGTTTGGAT+TGG - Chr3:39059535-39059554 None:intergenic 50.0%
GATAAAGGGCCGGTATGGAT+TGG + Chr3:39059332-39059351 MsG0380013478.01.T01:intron 50.0%
GATATTGTAGTCGGCACACC+TGG + Chr3:39060627-39060646 MsG0380013478.01.T01:CDS 50.0%
GATCGGAAGTTGTTCAACGG+TGG - Chr3:39058811-39058830 None:intergenic 50.0%
GATCTGGCCGAAATGGCTAT+GGG + Chr3:39064695-39064714 MsG0380013478.01.T01:CDS 50.0%
GATTGGAGATCGCGAAGCTT+GGG + Chr3:39059012-39059031 MsG0380013478.01.T01:CDS 50.0%
GTGAATGCGTTGGGGAAGAA+AGG + Chr3:39059050-39059069 MsG0380013478.01.T01:CDS 50.0%
GTTCATCGATCTGGACGAAC+AGG + Chr3:39063158-39063177 MsG0380013478.01.T01:CDS 50.0%
TAGTGGTCGATACGGCTCTT+CGG + Chr3:39064639-39064658 MsG0380013478.01.T01:CDS 50.0%
TCAACGGCAAAGTAGGAGAG+AGG + Chr3:39058865-39058884 MsG0380013478.01.T01:CDS 50.0%
TCAAGTCGTTCCAGTGGCTT+TGG + Chr3:39064820-39064839 MsG0380013478.01.T01:CDS 50.0%
TCGACAGGTCATAGGAATGG+AGG - Chr3:39062391-39062410 None:intergenic 50.0%
TCTCGGCAACAATGCCTTCT+TGG + Chr3:39060805-39060824 MsG0380013478.01.T01:CDS 50.0%
TGCGTGTTAGGACCTAGTGT+AGG + Chr3:39062810-39062829 MsG0380013478.01.T01:intron 50.0%
TGCTGGAACCTGCAATGCAA+GGG + Chr3:39060226-39060245 MsG0380013478.01.T01:CDS 50.0%
! AAGAAGGGATCCTCTGGCTT+TGG + Chr3:39060470-39060489 MsG0380013478.01.T01:CDS 50.0%
! ACGGATAAATACGGTGGTGG+AGG + Chr3:39064787-39064806 MsG0380013478.01.T01:CDS 50.0%
! AGGCTGTTTCACGCGAAATC+TGG + Chr3:39058885-39058904 MsG0380013478.01.T01:CDS 50.0%
! ATGATTGGTCGAGCCAGAAC+AGG + Chr3:39060255-39060274 MsG0380013478.01.T01:CDS 50.0%
! GCAACTGATGTTGCTTCTCG+TGG + Chr3:39062218-39062237 MsG0380013478.01.T01:CDS 50.0%
! GGCTCTAGTTCAAGGAAGTC+AGG + Chr3:39064736-39064755 MsG0380013478.01.T01:CDS 50.0%
! TGCTGTGGATTACGATCACG+CGG + Chr3:39058953-39058972 MsG0380013478.01.T01:CDS 50.0%
!! AGTTCTGGATCTGGCCGAAA+TGG + Chr3:39064688-39064707 MsG0380013478.01.T01:CDS 50.0%
!!! GGGAAATCCAGTGGTTTTGG+TGG + Chr3:39064715-39064734 MsG0380013478.01.T01:CDS 50.0%
ACAAGGCGAGGCTACTGTGA+CGG - Chr3:39058833-39058852 None:intergenic 55.0%
AGTGGTCGATACGGCTCTTC+GGG + Chr3:39064640-39064659 MsG0380013478.01.T01:CDS 55.0%
ATACGGCTCTTCGGGAGGTA+GGG + Chr3:39064648-39064667 MsG0380013478.01.T01:CDS 55.0%
CACTAGGTCCTAACACGCAC+AGG - Chr3:39062809-39062828 None:intergenic 55.0%
GAACTCACACACGCAAGTGG+AGG - Chr3:39059597-39059616 None:intergenic 55.0%
GAAGTCAGGAGGGGGATTTG+AGG + Chr3:39064750-39064769 MsG0380013478.01.T01:CDS 55.0%
GATCACGCGGAACACGATGA+TGG + Chr3:39058966-39058985 MsG0380013478.01.T01:CDS 55.0%
GGAACCTGCAATGCAAGGGA+GGG + Chr3:39060230-39060249 MsG0380013478.01.T01:CDS 55.0%
GGATCTGGCCGAAATGGCTA+TGG + Chr3:39064694-39064713 MsG0380013478.01.T01:CDS 55.0%
GGATTGGAGATCGCGAAGCT+TGG + Chr3:39059011-39059030 MsG0380013478.01.T01:CDS 55.0%
GGTGCTAACACCAAAGCCAG+AGG - Chr3:39060483-39060502 None:intergenic 55.0%
GTCGAGCCAGAACAGGAACT+GGG + Chr3:39060262-39060281 MsG0380013478.01.T01:CDS 55.0%
GTGCTGGAACCTGCAATGCA+AGG + Chr3:39060225-39060244 MsG0380013478.01.T01:CDS 55.0%
GTTGAACTTCCACTCGTCGC+TGG + Chr3:39058911-39058930 MsG0380013478.01.T01:CDS 55.0%
TCCTACTTTGCCGTTGACGG+CGG - Chr3:39058862-39058881 None:intergenic 55.0%
TGGAACCTGCAATGCAAGGG+AGG + Chr3:39060229-39060248 MsG0380013478.01.T01:CDS 55.0%
TGGGAACTCACACACGCAAG+TGG - Chr3:39059600-39059619 None:intergenic 55.0%
TTGTTGTCCTCCGCCGTCAA+CGG + Chr3:39058849-39058868 MsG0380013478.01.T01:CDS 55.0%
! ACAGGACGTGCCGGTAAGAA+AGG + Chr3:39063176-39063195 MsG0380013478.01.T01:CDS 55.0%
! GATGATGGTTGCGGTGTCAG+TGG + Chr3:39058981-39059000 MsG0380013478.01.T01:CDS 55.0%
! GCGGAACACGATGATGGTTG+CGG + Chr3:39058972-39058991 MsG0380013478.01.T01:CDS 55.0%
! TGCGGTGTCAGTGGTGATGA+AGG + Chr3:39058990-39059009 MsG0380013478.01.T01:CDS 55.0%
! TTTTGGGCATGGCGAGTAGG+AGG + Chr3:39060896-39060915 MsG0380013478.01.T01:intron 55.0%
!! CTGTTTTGGGCATGGCGAGT+AGG + Chr3:39060893-39060912 MsG0380013478.01.T01:intron 55.0%
ACACACGCAAGTGGAGGAGC+TGG - Chr3:39059591-39059610 None:intergenic 60.0%
CACGAGATACCAGCGACGAG+TGG - Chr3:39058923-39058942 None:intergenic 60.0%
CACTCGTCGCTGGTATCTCG+TGG + Chr3:39058921-39058940 MsG0380013478.01.T01:CDS 60.0%
CGTGCTCACCTGTGCGTGTT+AGG + Chr3:39062798-39062817 MsG0380013478.01.T01:intron 60.0%
GATACGGCTCTTCGGGAGGT+AGG + Chr3:39064647-39064666 MsG0380013478.01.T01:CDS 60.0%
GGTCGAGCCAGAACAGGAAC+TGG + Chr3:39060261-39060280 MsG0380013478.01.T01:CDS 60.0%
GTTGACGGCGGAGGACAACA+AGG - Chr3:39058850-39058869 None:intergenic 60.0%
TACTTTGCCGTTGACGGCGG+AGG - Chr3:39058859-39058878 None:intergenic 60.0%
TCCGCCGTCAACGGCAAAGT+AGG + Chr3:39058858-39058877 MsG0380013478.01.T01:CDS 60.0%
TCTGGACGAACAGGACGTGC+CGG + Chr3:39063167-39063186 MsG0380013478.01.T01:CDS 60.0%
!! GCGAGGCTACTGTGACGGAT+CGG - Chr3:39058828-39058847 None:intergenic 60.0%
GGTCGATACGGCTCTTCGGG+AGG + Chr3:39064643-39064662 MsG0380013478.01.T01:CDS 65.0%
!! TCGTGGTGCGCAGCTTGCTG+TGG + Chr3:39058938-39058957 MsG0380013478.01.T01:CDS 65.0%
CGGCGGAGGACAACAAGGCG+AGG - Chr3:39058845-39058864 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 39058750 39064888 39058750 ID=MsG0380013478.01;Name=MsG0380013478.01
Chr3 mRNA 39058750 39064888 39058750 ID=MsG0380013478.01.T01;Parent=MsG0380013478.01;Name=MsG0380013478.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|7|0|558
Chr3 exon 39058750 39059097 39058750 ID=MsG0380013478.01.T01:exon:8533;Parent=MsG0380013478.01.T01
Chr3 exon 39060219 39060346 39060219 ID=MsG0380013478.01.T01:exon:8534;Parent=MsG0380013478.01.T01
Chr3 exon 39060467 39060878 39060467 ID=MsG0380013478.01.T01:exon:8535;Parent=MsG0380013478.01.T01
Chr3 exon 39061675 39061773 39061675 ID=MsG0380013478.01.T01:exon:8536;Parent=MsG0380013478.01.T01
Chr3 exon 39062041 39062265 39062041 ID=MsG0380013478.01.T01:exon:8537;Parent=MsG0380013478.01.T01
Chr3 exon 39063119 39063280 39063119 ID=MsG0380013478.01.T01:exon:8538;Parent=MsG0380013478.01.T01
Chr3 exon 39064586 39064888 39064586 ID=MsG0380013478.01.T01:exon:8539;Parent=MsG0380013478.01.T01
Chr3 CDS 39058750 39059097 39058750 ID=MsG0380013478.01.T01:cds;Parent=MsG0380013478.01.T01
Chr3 CDS 39060219 39060346 39060219 ID=MsG0380013478.01.T01:cds;Parent=MsG0380013478.01.T01
Chr3 CDS 39060467 39060878 39060467 ID=MsG0380013478.01.T01:cds;Parent=MsG0380013478.01.T01
Chr3 CDS 39061675 39061773 39061675 ID=MsG0380013478.01.T01:cds;Parent=MsG0380013478.01.T01
Chr3 CDS 39062041 39062265 39062041 ID=MsG0380013478.01.T01:cds;Parent=MsG0380013478.01.T01
Chr3 CDS 39063119 39063280 39063119 ID=MsG0380013478.01.T01:cds;Parent=MsG0380013478.01.T01
Chr3 CDS 39064586 39064888 39064586 ID=MsG0380013478.01.T01:cds;Parent=MsG0380013478.01.T01
Gene Sequence

>MsG0380013478.01.T01

ATGACAAGCACGATTCTCAGAAGATCCTCTTCCATATTCTCACGGCGTTTCTTCGTCGCCACCGTTGAACAACTTCCGATCCGTCACAGTAGCCTCGCCTTGTTGTCCTCCGCCGTCAACGGCAAAGTAGGAGAGAGGCTGTTTCACGCGAAATCTGGACCGTTGAACTTCCACTCGTCGCTGGTATCTCGTGGTGCGCAGCTTGCTGTGGATTACGATCACGCGGAACACGATGATGGTTGCGGTGTCAGTGGTGATGAAGGATTGGAGATCGCGAAGCTTGGGATTTCTAAAGAGATCGTGAATGCGTTGGGGAAGAAAGGGATCGCAAAGCTCTTTCCCATTCAGAGAGCTGTGCTGGAACCTGCAATGCAAGGGAGGGATATGATTGGTCGAGCCAGAACAGGAACTGGGAAAACTCTTGCTTTTGGGATACCCATCTTGGATAAGATTATTAAGTTTAATGCTAAAAATGGCAAAAGAAGGGATCCTCTGGCTTTGGTGTTAGCACCAACTAGAGAACTTGCACGACAAGTTGAAAAGGAATTCAAGGATGCTGCACCTAACTTGGAAATAATTAGTCTTTATGGGGGCATGCCTATTCAGCAACAAATTAGCAAACTTGGTAGTGGCGTAGATATTGTAGTCGGCACACCTGGACGTGTTATTGATCTTCTCAAAAGGGGTTCACTGAAACTGAAGGATGTTAATTATGTTGTTCTTGATGAAGCTGATCAGATGCTTCAAGTAGGATTTCAAGAAGCGGTAGAGACTATCTTGCAGAAGTTGCCTTCTAAGCGTCAAACTCTTATGTTCTCGGCAACAATGCCTTCTTGGATAAAGAATCTTACGCGCAATTACCTAAACAAACCCTTAACAATTGATCTTGTTGGAGATTCTGATCAGAAGTTGGCAGATGGAATTTCACTGTACTCGATTGCATCTAATGCCTATTCTAAAGCAGGAATTCTTGTACCTCTTATAACAGAACATGCTAAAGGAGGAAAGTGTATTGTTTTCACTCAAACCAAACGTGATGCTGATCGTCTATCACATATAATGGCAAAAAGCATTAAATGCGAGGCCTTGCATGGAGATATTTCACAAACTCAGAGAGAAAGAACTCTTACTGGCTTTAGAAACAGCTATTTCAATGTTTTGGTGGCAACTGATGTTGCTTCTCGTGGGCTTGATATACCAAATGTTGATCTTGTAATACATTATGAACTTCCAAATAATTCAGAGATATTTGTTCATCGATCTGGACGAACAGGACGTGCCGGTAAGAAAGGAACTGCTATTCTTGTCCACACAGAAAATCAATCCAGGGATGTAAAGACAATTGAGAGAGACGTTGGATGTAAATTCACAGAGTTACCAAAGATTGCTGTTGAAAGTGGATCAGCAGACATGTTTGGCAGCACGAGTAGTGGTCGATACGGCTCTTCGGGAGGTAGGGATCGTCAATCAAGTAGTAGTTCTGGATCTGGCCGAAATGGCTATGGGAAATCCAGTGGTTTTGGTGGCTCTAGTTCAAGGAAGTCAGGAGGGGGATTTGAGGAATTTTCTGGTAAAACGGATAAATACGGTGGTGGAGGATTTAGCAGTTCAAGTCGTTCCAGTGGCTTTGGAAAGTTTAGCTCAGGTAAATCTGGGAGATATGGTGACAGAAATTGA
Protein sequence

>MsG0380013478.01.T01

MTSTILRRSSSIFSRRFFVATVEQLPIRHSSLALLSSAVNGKVGERLFHAKSGPLNFHSSLVSRGAQLAVDYDHAEHDDGCGVSGDEGLEIAKLGISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNAKNGKRRDPLALVLAPTRELARQVEKEFKDAAPNLEIISLYGGMPIQQQISKLGSGVDIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETILQKLPSKRQTLMFSATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILVPLITEHAKGGKCIVFTQTKRDADRLSHIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTENQSRDVKTIERDVGCKFTELPKIAVESGSADMFGSTSSGRYGSSGGRDRQSSSSSGSGRNGYGKSSGFGGSSSRKSGGGFEEFSGKTDKYGGGGFSSSSRSSGFGKFSSGKSGRYGDRN*