AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380013854.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013854.01.T01 MTR_3g049990 74.453 685 109 11 1 634 1 670 0.0 902
MsG0380013854.01.T01 MTR_3g049990 94.340 159 8 1 490 647 602 760 7.81e-77 261
MsG0380013854.01.T01 MTR_2g041140 71.817 589 102 9 5 548 2 571 0.0 785
MsG0380013854.01.T01 MTR_2g041140 83.099 142 23 1 490 631 592 732 4.82e-61 217
MsG0380013854.01.T01 MTR_6g082080 38.764 356 182 6 154 480 10 358 9.57e-72 239
MsG0380013854.01.T01 MTR_7g056830 38.527 353 181 5 154 477 10 355 1.18e-71 239
MsG0380013854.01.T01 MTR_3g467550 36.318 402 196 9 153 506 116 505 2.30e-67 231
MsG0380013854.01.T01 MTR_3g467550 37.435 382 179 9 173 506 105 474 6.29e-67 229
MsG0380013854.01.T01 MTR_6g005320 34.456 386 197 7 154 490 249 627 3.51e-61 216
MsG0380013854.01.T01 MTR_2g066050 33.882 425 226 7 154 532 53 468 3.02e-60 210
MsG0380013854.01.T01 MTR_4g134170 34.536 388 196 8 154 490 287 667 7.91e-59 210
MsG0380013854.01.T01 MTR_4g079320 34.986 363 196 4 154 484 19 373 1.74e-58 211
MsG0380013854.01.T01 MTR_1g054630 35.825 388 195 8 153 493 153 533 5.82e-57 203
MsG0380013854.01.T01 MTR_7g109720 34.236 406 210 9 154 519 232 620 7.15e-57 206
MsG0380013854.01.T01 MTR_4g105100 34.771 371 198 7 154 487 202 565 2.34e-56 202
MsG0380013854.01.T01 MTR_2g032630 37.255 357 168 10 164 480 507 847 4.12e-56 206
MsG0380013854.01.T01 MTR_3g083690 32.874 435 224 11 115 493 103 525 6.40e-55 198
MsG0380013854.01.T01 MTR_2g007000 34.626 361 196 6 154 480 504 858 9.01e-55 202
MsG0380013854.01.T01 MTR_6g005550 35.979 378 180 9 144 480 160 516 2.24e-54 198
MsG0380013854.01.T01 MTR_7g057250 33.255 424 177 10 154 477 163 580 3.62e-54 199
MsG0380013854.01.T01 MTR_5g092560 34.731 334 179 6 177 476 99 427 8.54e-54 197
MsG0380013854.01.T01 MTR_2g100230 34.734 357 193 6 172 495 114 463 8.59e-54 192
MsG0380013854.01.T01 MTR_3g467550 35.569 343 167 7 153 451 116 448 1.09e-53 191
MsG0380013854.01.T01 MTR_2g055850 33.067 375 206 8 150 487 87 453 1.34e-53 193
MsG0380013854.01.T01 MTR_3g449250 35.958 381 192 11 147 487 80 448 4.50e-53 192
MsG0380013854.01.T01 MTR_3g449250 35.884 379 195 10 147 487 80 448 1.76e-52 190
MsG0380013854.01.T01 MTR_4g068990 33.429 347 187 8 177 487 99 437 1.84e-52 193
MsG0380013854.01.T01 MTR_7g076820 34.286 385 206 8 148 501 144 512 1.99e-51 186
MsG0380013854.01.T01 MTR_4g114120 33.419 389 202 6 155 493 141 522 3.46e-51 188
MsG0380013854.01.T01 MTR_1g095810 32.877 365 199 7 154 479 145 502 4.30e-51 187
MsG0380013854.01.T01 MTR_7g076830 33.766 385 208 8 148 501 137 505 8.49e-51 184
MsG0380013854.01.T01 MTR_7g076800 32.639 432 220 11 106 501 107 503 8.86e-51 184
MsG0380013854.01.T01 MTR_3g071620 33.676 389 182 10 160 487 22 395 3.58e-50 184
MsG0380013854.01.T01 MTR_5g090120 34.271 391 210 10 133 487 60 439 7.11e-50 183
MsG0380013854.01.T01 MTR_4g112340 33.616 354 191 8 171 487 114 460 8.49e-50 183
MsG0380013854.01.T01 MTR_5g027840 32.891 377 203 9 159 495 109 475 3.20e-49 180
MsG0380013854.01.T01 MTR_1g026830 32.055 365 202 6 154 479 147 504 4.13e-49 181
MsG0380013854.01.T01 MTR_8g097000 31.840 424 226 12 115 493 261 666 3.46e-48 181
MsG0380013854.01.T01 MTR_4g125970 32.432 370 200 7 153 487 40 394 9.51e-48 173
MsG0380013854.01.T01 MTR_1g083130 30.072 419 220 7 154 500 26 443 1.54e-47 177
MsG0380013854.01.T01 MTR_2g039960 32.432 370 200 7 153 487 40 394 6.78e-47 171
MsG0380013854.01.T01 MTR_4g125970 32.432 370 200 7 153 487 57 411 8.33e-47 171
MsG0380013854.01.T01 MTR_6g056080 36.290 372 184 13 178 509 127 485 1.10e-44 170
MsG0380013854.01.T01 MTR_1g102410 33.656 413 197 12 157 509 47 442 1.49e-44 169
MsG0380013854.01.T01 MTR_2g099620 31.443 388 209 9 137 487 27 394 4.95e-44 163
MsG0380013854.01.T01 MTR_1g012420 32.153 367 198 9 148 477 41 393 6.41e-44 163
MsG0380013854.01.T01 MTR_2g099620 31.443 388 209 9 137 487 11 378 7.27e-44 162
MsG0380013854.01.T01 MTR_8g027775 29.820 389 220 9 134 476 82 463 8.41e-44 166
MsG0380013854.01.T01 MTR_4g010565 32.791 369 195 11 160 489 129 483 9.35e-44 164
MsG0380013854.01.T01 MTR_4g105100 34.062 320 177 5 154 440 202 520 1.36e-43 164
MsG0380013854.01.T01 MTR_8g027770 31.078 399 220 11 134 484 179 570 1.93e-43 166
MsG0380013854.01.T01 MTR_3g107420 31.608 367 200 9 148 477 41 393 3.77e-43 161
MsG0380013854.01.T01 MTR_8g018400 31.282 390 211 9 135 487 25 394 4.34e-43 160
MsG0380013854.01.T01 MTR_6g033070 28.084 381 228 9 154 497 140 511 4.55e-43 163
MsG0380013854.01.T01 MTR_6g039840 29.369 412 209 11 129 487 101 483 1.48e-41 161
MsG0380013854.01.T01 MTR_8g027780 29.657 408 229 11 133 493 88 484 5.06e-41 158
MsG0380013854.01.T01 MTR_2g438110 29.539 369 210 8 154 487 34 387 6.97e-41 154
MsG0380013854.01.T01 MTR_4g059460 38.346 266 129 8 130 369 26 282 7.14e-40 155
MsG0380013854.01.T01 MTR_4g059460 38.202 89 49 1 388 476 383 465 2.32e-12 70.5
MsG0380013854.01.T01 MTR_5g069330 29.589 365 217 6 154 487 7 362 2.28e-39 150
MsG0380013854.01.T01 MTR_5g069330 29.589 365 217 6 154 487 3 358 3.44e-39 149
MsG0380013854.01.T01 MTR_2g043360 38.776 245 123 6 150 369 37 279 4.06e-39 153
MsG0380013854.01.T01 MTR_2g043360 38.202 89 49 1 388 476 380 462 2.48e-12 70.5
MsG0380013854.01.T01 MTR_7g100820 29.508 366 210 8 164 495 144 495 6.11e-39 152
MsG0380013854.01.T01 MTR_4g459350 38.589 241 113 8 130 344 23 254 4.24e-37 140
MsG0380013854.01.T01 MTR_4g077370 42.487 193 106 2 154 344 250 439 2.69e-36 142
MsG0380013854.01.T01 MTR_4g077370 37.374 198 102 3 154 348 2 180 3.66e-27 115
MsG0380013854.01.T01 MTR_4g112320 31.488 289 152 8 233 487 2 278 9.14e-34 134
MsG0380013854.01.T01 MTR_8g027780 29.248 359 202 10 133 444 88 441 9.68e-34 135
MsG0380013854.01.T01 MTR_0915s0010 40.761 184 105 2 172 355 7 186 2.46e-33 129
MsG0380013854.01.T01 MTR_1g022305 29.706 340 190 9 154 487 3 299 3.89e-33 133
MsG0380013854.01.T01 MTR_5g077690 27.155 464 227 12 167 530 42 494 6.37e-32 130
MsG0380013854.01.T01 MTR_6g039840 29.375 320 169 9 212 487 1 307 8.14e-32 130
MsG0380013854.01.T01 MTR_8g032230 41.722 151 86 1 154 304 10 158 5.18e-31 119
MsG0380013854.01.T01 MTR_2g063080 26.253 419 212 10 150 480 105 514 4.74e-29 122
MsG0380013854.01.T01 MTR_5g092560 33.796 216 105 5 294 476 6 216 4.87e-28 119
MsG0380013854.01.T01 MTR_4g068990 32.599 227 114 6 294 487 6 226 1.87e-26 114
MsG0380013854.01.T01 MTR_1g061970 27.209 430 226 17 151 514 77 485 2.11e-25 110
MsG0380013854.01.T01 MTR_3g107420 35.052 194 118 6 160 349 52 241 6.24e-25 106
MsG0380013854.01.T01 MTR_2g043360 37.107 159 77 3 234 369 3 161 3.61e-21 97.8
MsG0380013854.01.T01 MTR_2g043360 38.202 89 49 1 388 476 262 344 1.32e-12 70.9
MsG0380013854.01.T01 MTR_3g118120 29.612 206 131 5 150 344 128 330 4.16e-17 85.5
MsG0380013854.01.T01 MTR_8g018370 23.684 342 190 7 184 490 3 308 7.65e-17 82.4
MsG0380013854.01.T01 MTR_4g131750 26.648 364 192 12 164 465 92 442 7.14e-16 81.3
MsG0380013854.01.T01 MTR_8g062720 28.761 226 135 6 148 353 83 302 2.91e-14 76.6
MsG0380013854.01.T01 MTR_2g031570 50.000 66 33 0 154 219 72 137 1.57e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013854.01.T01 AT4G16630 63.109 534 145 7 1 488 1 528 0.0 640
MsG0380013854.01.T01 AT4G16630 47.895 190 77 4 475 645 601 787 2.86e-25 112
MsG0380013854.01.T01 AT1G16280 39.683 378 184 5 144 487 50 417 2.37e-71 239
MsG0380013854.01.T01 AT5G60990 34.298 449 232 9 154 557 10 440 2.28e-70 236
MsG0380013854.01.T01 AT5G54910 33.085 402 219 9 124 487 44 433 2.49e-57 207
MsG0380013854.01.T01 AT1G55150 34.667 375 205 6 154 495 100 467 2.95e-57 202
MsG0380013854.01.T01 AT3G58570 35.219 389 198 8 152 493 145 526 1.34e-56 203
MsG0380013854.01.T01 AT1G55150 34.667 375 205 6 154 495 125 492 2.90e-56 200
MsG0380013854.01.T01 AT5G14610 35.870 368 179 8 154 480 162 513 5.84e-56 201
MsG0380013854.01.T01 AT5G14610 35.870 368 179 8 154 480 162 513 6.82e-56 201
MsG0380013854.01.T01 AT2G33730 33.681 383 194 6 154 484 314 688 6.87e-56 202
MsG0380013854.01.T01 AT5G14610 35.870 368 179 8 154 480 170 521 9.41e-56 201
MsG0380013854.01.T01 AT2G42520 35.204 392 194 11 152 493 158 539 2.51e-55 199
MsG0380013854.01.T01 AT2G42520 35.204 392 194 11 152 493 158 539 2.51e-55 199
MsG0380013854.01.T01 AT2G42520 35.204 392 194 11 152 493 158 539 2.51e-55 199
MsG0380013854.01.T01 AT1G77030 34.903 361 189 6 155 480 30 379 3.77e-55 202
MsG0380013854.01.T01 AT2G47330 32.812 448 247 9 71 477 145 579 6.64e-55 200
MsG0380013854.01.T01 AT5G63120 34.392 378 200 7 155 495 167 533 1.73e-54 196
MsG0380013854.01.T01 AT1G31970 34.204 383 201 9 154 495 117 489 1.98e-54 195
MsG0380013854.01.T01 AT3G01540 35.714 364 185 8 154 480 159 510 1.30e-53 194
MsG0380013854.01.T01 AT3G01540 35.714 364 185 8 154 480 159 510 1.30e-53 194
MsG0380013854.01.T01 AT3G01540 35.714 364 185 8 154 480 159 510 1.30e-53 194
MsG0380013854.01.T01 AT5G65900 33.065 372 201 8 154 487 155 516 1.35e-53 194
MsG0380013854.01.T01 AT3G01540 35.714 364 185 8 154 480 159 510 1.83e-53 194
MsG0380013854.01.T01 AT1G20920 33.241 361 199 6 155 480 531 884 4.68e-53 197
MsG0380013854.01.T01 AT1G20920 33.241 361 199 6 155 480 531 884 4.68e-53 197
MsG0380013854.01.T01 AT1G20920 33.241 361 199 6 155 480 531 884 4.68e-53 197
MsG0380013854.01.T01 AT1G20920 33.241 361 199 6 155 480 531 884 4.68e-53 197
MsG0380013854.01.T01 AT1G20920 33.241 361 199 6 155 480 531 884 4.68e-53 197
MsG0380013854.01.T01 AT1G20920 33.241 361 199 6 155 480 531 884 4.68e-53 197
MsG0380013854.01.T01 AT2G45810 35.068 365 193 8 148 481 149 500 4.69e-53 191
MsG0380013854.01.T01 AT3G22310 35.467 375 192 12 158 496 121 481 4.94e-53 192
MsG0380013854.01.T01 AT5G14610 36.000 350 167 8 172 480 49 382 5.09e-53 191
MsG0380013854.01.T01 AT5G14610 36.000 350 167 8 172 480 49 382 5.09e-53 191
MsG0380013854.01.T01 AT3G22310 35.467 375 192 12 158 496 121 481 6.30e-53 192
MsG0380013854.01.T01 AT5G14610 36.000 350 167 8 172 480 248 581 1.05e-52 193
MsG0380013854.01.T01 AT3G06480 37.607 351 176 8 164 480 446 787 1.34e-52 196
MsG0380013854.01.T01 AT3G58510 34.908 381 190 10 158 493 162 529 1.98e-52 191
MsG0380013854.01.T01 AT3G58510 34.908 381 190 10 158 493 162 529 1.98e-52 191
MsG0380013854.01.T01 AT3G58510 34.908 381 190 10 158 493 162 529 1.98e-52 191
MsG0380013854.01.T01 AT3G61240 32.195 410 227 9 110 481 74 470 2.69e-52 188
MsG0380013854.01.T01 AT3G61240 32.195 410 227 9 110 481 74 470 2.69e-52 188
MsG0380013854.01.T01 AT3G18600 31.202 391 223 7 132 487 71 450 3.01e-52 189
MsG0380013854.01.T01 AT5G26742 34.015 391 208 7 157 509 106 484 7.71e-52 191
MsG0380013854.01.T01 AT5G26742 34.015 391 208 7 157 509 106 484 7.79e-52 191
MsG0380013854.01.T01 AT1G20920 33.241 361 199 6 155 480 193 546 1.21e-51 192
MsG0380013854.01.T01 AT4G00660 33.247 385 210 8 148 501 126 494 1.21e-50 184
MsG0380013854.01.T01 AT4G00660 33.247 385 210 8 148 501 126 494 1.21e-50 184
MsG0380013854.01.T01 AT3G22330 34.309 376 197 12 157 496 108 469 2.19e-50 185
MsG0380013854.01.T01 AT5G26742 33.249 394 201 9 154 509 22 391 8.30e-50 184
MsG0380013854.01.T01 AT5G51280 33.333 366 196 8 154 479 147 504 3.92e-49 181
MsG0380013854.01.T01 AT4G33370 33.607 366 195 9 154 479 98 455 7.68e-49 179
MsG0380013854.01.T01 AT5G05450 33.711 353 171 9 177 476 40 382 3.70e-47 176
MsG0380013854.01.T01 AT3G13920 32.432 370 200 7 153 487 39 393 9.20e-47 171
MsG0380013854.01.T01 AT3G13920 32.432 370 200 7 153 487 29 383 2.03e-46 169
MsG0380013854.01.T01 AT3G13920 32.425 367 198 7 153 484 43 394 2.51e-46 170
MsG0380013854.01.T01 AT3G13920 32.425 367 198 7 153 484 39 390 2.67e-46 169
MsG0380013854.01.T01 AT5G62190 34.660 427 220 15 157 539 100 511 5.83e-46 174
MsG0380013854.01.T01 AT1G71370 33.425 362 185 10 160 476 23 373 6.20e-46 172
MsG0380013854.01.T01 AT1G54270 32.432 370 200 7 153 487 39 393 1.31e-45 167
MsG0380013854.01.T01 AT5G08620 30.964 394 221 8 142 490 69 456 2.76e-45 170
MsG0380013854.01.T01 AT1G72730 32.075 371 202 7 152 487 40 395 3.99e-45 166
MsG0380013854.01.T01 AT3G13920 32.432 370 195 8 153 487 39 388 5.88e-45 166
MsG0380013854.01.T01 AT3G09620 30.407 467 267 11 22 480 306 722 8.33e-45 172
MsG0380013854.01.T01 AT3G09620 30.407 467 267 11 22 480 307 723 8.73e-45 172
MsG0380013854.01.T01 AT3G09720 31.726 394 218 10 164 526 152 525 6.85e-44 166
MsG0380013854.01.T01 AT3G09720 31.726 394 218 10 164 526 152 525 6.85e-44 166
MsG0380013854.01.T01 AT1G54270 32.432 370 195 8 153 487 39 388 8.21e-44 162
MsG0380013854.01.T01 AT5G08610 28.500 400 211 8 151 490 374 758 9.09e-44 169
MsG0380013854.01.T01 AT1G28180 32.743 339 188 7 182 487 2 333 2.68e-43 160
MsG0380013854.01.T01 AT5G11170 31.967 366 198 9 148 476 41 392 3.11e-43 161
MsG0380013854.01.T01 AT5G11200 31.967 366 198 9 148 476 41 392 3.11e-43 161
MsG0380013854.01.T01 AT3G02065 29.921 381 222 9 154 497 111 483 4.81e-43 162
MsG0380013854.01.T01 AT3G02065 29.921 381 222 9 154 497 111 483 4.81e-43 162
MsG0380013854.01.T01 AT5G14610 35.110 319 156 7 154 431 170 478 1.02e-42 161
MsG0380013854.01.T01 AT5G63630 30.214 374 209 8 163 490 257 624 3.58e-42 163
MsG0380013854.01.T01 AT1G51380 29.156 391 226 8 132 487 2 376 1.78e-41 155
MsG0380013854.01.T01 AT5G63630 29.919 371 209 7 165 490 66 430 4.03e-41 157
MsG0380013854.01.T01 AT4G34910 30.203 394 184 6 154 466 47 430 4.35e-41 159
MsG0380013854.01.T01 AT5G63120 34.824 313 162 6 155 430 167 474 9.73e-41 155
MsG0380013854.01.T01 AT1G63250 31.122 392 214 10 150 493 325 708 1.28e-40 159
MsG0380013854.01.T01 AT3G06480 34.969 326 163 8 164 449 446 762 1.30e-40 159
MsG0380013854.01.T01 AT5G63120 34.713 314 163 6 155 431 167 475 1.62e-40 155
MsG0380013854.01.T01 AT5G63120 34.713 314 163 6 155 431 167 475 1.62e-40 155
MsG0380013854.01.T01 AT5G63120 34.713 314 163 6 155 431 167 475 1.62e-40 155
MsG0380013854.01.T01 AT2G07750 31.633 392 212 11 150 493 372 755 2.32e-40 159
MsG0380013854.01.T01 AT3G19760 29.539 369 210 7 154 487 36 389 3.32e-40 152
MsG0380013854.01.T01 AT4G09730 29.474 380 212 7 152 483 111 482 5.06e-38 150
MsG0380013854.01.T01 AT2G40700 35.938 256 136 7 127 361 11 259 3.40e-37 147
MsG0380013854.01.T01 AT2G40700 38.679 106 55 2 392 497 376 471 3.85e-13 73.2
MsG0380013854.01.T01 AT3G02065 29.060 351 204 9 184 497 4 346 3.65e-37 143
MsG0380013854.01.T01 AT1G71280 33.226 310 171 8 160 448 24 318 1.98e-36 143
MsG0380013854.01.T01 AT1G71280 34.259 324 166 11 160 450 24 333 2.58e-36 139
MsG0380013854.01.T01 AT5G11200 30.233 387 186 10 164 476 57 433 1.14e-35 140
MsG0380013854.01.T01 AT5G11170 31.988 322 168 9 192 476 2 309 2.45e-35 137
MsG0380013854.01.T01 AT4G15850 29.056 413 189 10 164 480 42 446 4.74e-35 140
MsG0380013854.01.T01 AT3G53110 29.742 427 219 18 120 487 60 464 4.39e-34 136
MsG0380013854.01.T01 AT3G16840 37.288 236 100 6 150 340 190 422 4.40e-32 133
MsG0380013854.01.T01 AT3G16840 34.694 98 58 1 385 482 522 613 2.82e-11 67.4
MsG0380013854.01.T01 AT3G16840 37.288 236 100 6 150 340 189 421 4.47e-32 133
MsG0380013854.01.T01 AT3G16840 34.694 98 58 1 385 482 521 612 2.84e-11 67.4
MsG0380013854.01.T01 AT3G06980 26.988 415 237 12 150 505 371 778 3.41e-29 124
MsG0380013854.01.T01 AT1G51380 30.364 247 160 6 132 377 2 237 9.50e-27 110
MsG0380013854.01.T01 AT5G11200 36.508 189 112 6 160 344 52 236 9.74e-26 111
MsG0380013854.01.T01 AT1G51380 30.172 232 155 5 132 362 2 227 1.99e-24 104
MsG0380013854.01.T01 AT1G51380 30.172 232 155 5 132 362 2 227 4.23e-24 103
MsG0380013854.01.T01 AT1G12770 34.101 217 116 6 150 340 107 322 6.34e-20 94.4
MsG0380013854.01.T01 AT1G12770 33.333 96 58 1 390 485 431 520 3.81e-11 66.6
MsG0380013854.01.T01 AT1G12770 34.101 217 116 6 150 340 107 322 6.34e-20 94.4
MsG0380013854.01.T01 AT1G12770 33.333 96 58 1 390 485 431 520 3.81e-11 66.6
MsG0380013854.01.T01 AT5G19210 25.654 382 213 14 164 485 87 457 7.77e-18 87.4
MsG0380013854.01.T01 AT1G28180 38.053 113 65 1 182 289 2 114 6.63e-15 72.0
MsG0380013854.01.T01 AT1G59990 28.516 256 132 9 126 360 63 288 2.86e-11 67.0
MsG0380013854.01.T01 AT1G59990 28.516 256 132 9 126 360 63 288 3.30e-11 67.0

Find 154 sgRNAs with CRISPR-Local

Find 528 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATAGATTGAAGATTATATT+TGG 0.172830 3:-46716512 MsG0380013854.01.T01:CDS
TCTTCTTCATCTTCTTCTTC+TGG 0.229365 3:+46719722 None:intergenic
TATAGGCTTTGGAACAATTT+AGG 0.233468 3:-46716278 MsG0380013854.01.T01:intron
CAATTCCATGTCGGTGGATT+TGG 0.242294 3:-46718015 MsG0380013854.01.T01:CDS
AAAGGATCAGATAATAGTTT+TGG 0.266503 3:+46713018 None:intergenic
TCCTTCTTTGCTCCTTCTGC+TGG 0.270663 3:-46719677 MsG0380013854.01.T01:CDS
AGGATTTAGTGCTGAAATTC+AGG 0.270758 3:-46717943 MsG0380013854.01.T01:CDS
AACTTTCTGCGCTTCTTTCT+AGG 0.271793 3:+46713499 None:intergenic
TTCTAAACCAACACCAATTC+AGG 0.275452 3:-46719576 MsG0380013854.01.T01:intron
CTTATTGCATGCACACGTTT+TGG 0.281587 3:+46719130 None:intergenic
CCGACATGGAATTGCGTAAA+TGG 0.283557 3:+46718024 None:intergenic
ACTCCGGGCTTGCGAGGTCT+TGG 0.289677 3:-46719603 MsG0380013854.01.T01:CDS
CTCCGGGCTTGCGAGGTCTT+GGG 0.301379 3:-46719602 MsG0380013854.01.T01:CDS
TCTTCTCCTGATTGAGATTC+GGG 0.308022 3:+46721275 None:intergenic
GTCTTCTCCTGATTGAGATT+CGG 0.315307 3:+46721274 None:intergenic
CAAAACGTGTGCATGCAATA+AGG 0.320871 3:-46719129 MsG0380013854.01.T01:CDS
TCTGATTCTGAGTCTGAGTC+TGG 0.321509 3:+46721245 None:intergenic
TGATGAAGCAGATCGTCTTT+TGG 0.326716 3:-46717970 MsG0380013854.01.T01:CDS
AAGCCGAAACAGAGAGGTTC+TGG 0.341653 3:-46713112 MsG0380013854.01.T01:CDS
CGCGAAAGACTTCTTCTTCA+AGG 0.342626 3:-46713180 MsG0380013854.01.T01:CDS
AGCAGAAAGGCGCAGGGGTT+TGG 0.344672 3:+46717712 None:intergenic
CTCTGGTTGGAGTAAGAATA+AGG 0.346312 3:+46719104 None:intergenic
AAGATTATATTTGGATTAGC+TGG 0.353455 3:-46716503 MsG0380013854.01.T01:CDS
GACTGCAGACCCCGCTCTTC+CGG 0.381302 3:+46715302 None:intergenic
TTGAAAGCTGCTGAGCTTCA+TGG 0.384853 3:-46716479 MsG0380013854.01.T01:CDS
ACTCCAGAACCTCTCTGTTT+CGG 0.392164 3:+46713109 None:intergenic
TTTGAGGTCTTCAGCTTGCT+GGG 0.400145 3:+46713690 None:intergenic
CCTCGCAAGCCCGGAGTAAA+GGG 0.403589 3:+46719609 None:intergenic
ACCTCGCAAGCCCGGAGTAA+AGG 0.412434 3:+46719608 None:intergenic
GAGTTCGATTTCTTCGTCGC+TGG 0.415854 3:+46721340 None:intergenic
ACTTCAGGGACTGACATCAT+AGG 0.419404 3:-46715531 MsG0380013854.01.T01:CDS
ATATGTGGAAGTGCCATTAC+TGG 0.419525 3:-46719334 MsG0380013854.01.T01:CDS
TCCAGAATCTAATGCCCTCT+TGG 0.420862 3:+46713249 None:intergenic
CATGTCCACGTGATCTTACC+AGG 0.429992 3:-46715485 MsG0380013854.01.T01:intron
TTTGTCTCGCCCTTTACTCC+GGG 0.431719 3:-46719618 MsG0380013854.01.T01:CDS
TGACTGTTAACAGGCATCAT+TGG 0.432101 3:-46713749 MsG0380013854.01.T01:intron
TCCAGCAGAAGGAGCAAAGA+AGG 0.432678 3:+46719676 None:intergenic
GGGTTGTGATTGTTCTGAAT+CGG 0.433644 3:+46721295 None:intergenic
ACAGCAAGAGCCGGAAGAGC+GGG 0.436910 3:-46715312 MsG0380013854.01.T01:CDS
GCGCCTTTCTGCTGATCCAT+TGG 0.439621 3:-46717702 MsG0380013854.01.T01:CDS
TTGACAGACCACCGACAATC+AGG 0.441536 3:+46718397 None:intergenic
TACTCCTCGGTCAAGGATGC+TGG 0.449103 3:+46717671 None:intergenic
CTGCTGATCCATTGGCAAAA+CGG 0.453031 3:-46717694 MsG0380013854.01.T01:CDS
AAGAGGCTGCTTTGAGATCA+AGG 0.456656 3:-46718085 MsG0380013854.01.T01:CDS
ATTTGTCTCGCCCTTTACTC+CGG 0.456966 3:-46719619 MsG0380013854.01.T01:CDS
TCACGACCAGTCAATGCTAA+TGG 0.458484 3:+46719358 None:intergenic
TAGAAAGAAGCGCAGAAAGT+TGG 0.461288 3:-46713497 MsG0380013854.01.T01:CDS
GGAGTAGCCACAACAATGTC+TGG 0.461841 3:+46718062 None:intergenic
GGATTCATCGGAATCGTGTT+CGG 0.463031 3:+46721316 None:intergenic
AAAATAACCTGAATTGGTGT+TGG 0.463378 3:+46719569 None:intergenic
ATGGATCAGCAGAAAGGCGC+AGG 0.465141 3:+46717705 None:intergenic
AACCTCCTCGGTCATGGTTG+CGG 0.465436 3:+46717760 None:intergenic
TTACTGGGCTGCCAACTCTC+TGG 0.471791 3:+46719087 None:intergenic
GGAAGTGCCATTACTGGATC+GGG 0.473671 3:-46719328 MsG0380013854.01.T01:CDS
CAGAAAGTTGGAAGCAGCTA+GGG 0.473738 3:-46713485 MsG0380013854.01.T01:CDS
GGAAGCAGCTAGGGAGATGT+TGG 0.475169 3:-46713476 MsG0380013854.01.T01:CDS
ACCCCAAGACCTCGCAAGCC+CGG 0.475315 3:+46719600 None:intergenic
CTACTGCCGTCATCGCTGTC+AGG 0.481487 3:+46721056 None:intergenic
AAAACGTGTGCATGCAATAA+GGG 0.486998 3:-46719128 MsG0380013854.01.T01:CDS
CATTGTTGGAGGGTTTAGAA+AGG 0.487668 3:+46721388 None:intergenic
AGATGGTTCTTCTCATAAGA+TGG 0.487888 3:-46713719 MsG0380013854.01.T01:CDS
AGTTCGATTTCTTCGTCGCT+GGG 0.489013 3:+46721341 None:intergenic
ACCAAGAGGGCATTAGATTC+TGG 0.491283 3:-46713250 MsG0380013854.01.T01:CDS
GACATTGTTGTGGCTACTCC+AGG 0.496061 3:-46718059 MsG0380013854.01.T01:CDS
AAAGGCGCAGGGGTTTGGAT+AGG 0.500854 3:+46717717 None:intergenic
TGTCAGACAACGCTCAGCTC+CGG 0.505215 3:-46721090 MsG0380013854.01.T01:CDS
AAGGCGCAGGGGTTTGGATA+GGG 0.506812 3:+46717718 None:intergenic
GAAACATACTCCTAGACGTT+GGG 0.507082 3:+46716442 None:intergenic
ACCTCAAAATGAAGGAAAAG+AGG 0.507728 3:-46713675 MsG0380013854.01.T01:CDS
TCCGGGCTTGCGAGGTCTTG+GGG 0.511684 3:-46719601 MsG0380013854.01.T01:CDS
TGGGCTGCCAACTCTCTGGT+TGG 0.514783 3:+46719091 None:intergenic
AGAAGAAAACACAGTCTCCA+TGG 0.518401 3:-46721193 MsG0380013854.01.T01:CDS
AGCTGAAGACCTCAAAATGA+AGG 0.518617 3:-46713683 MsG0380013854.01.T01:CDS
CCGACGTGCAAAAGCAGTAA+AGG 0.519197 3:-46713275 MsG0380013854.01.T01:CDS
CTTACTCAGGCCCAACGTCT+AGG 0.522717 3:-46716452 MsG0380013854.01.T01:CDS
GCAGAAAGTTGGAAGCAGCT+AGG 0.522915 3:-46713486 MsG0380013854.01.T01:CDS
GATGAAGAAGATGGTAATGC+TGG 0.525012 3:-46719710 MsG0380013854.01.T01:CDS
GAAGAAGAAGATGAAGAAGA+TGG 0.525330 3:-46719719 MsG0380013854.01.T01:CDS
CTGATTCTGAGTCTGAGTCT+GGG 0.528026 3:+46721246 None:intergenic
ATCATCAACCTCCTCGGTCA+TGG 0.528231 3:+46717754 None:intergenic
CTGAAGCTATGTTCATCGAG+TGG 0.528834 3:-46715340 MsG0380013854.01.T01:intron
TGGAAGTGCCATTACTGGAT+CGG 0.533404 3:-46719329 MsG0380013854.01.T01:CDS
TGTATACCATTAGCATTGAC+TGG 0.533476 3:-46719364 MsG0380013854.01.T01:CDS
TCACAACCCGAATCTCAATC+AGG 0.534278 3:-46721281 MsG0380013854.01.T01:CDS
ATGAAACTAGGTGACATTGT+TGG 0.535919 3:+46721374 None:intergenic
CTGAAAGAGGTTCCAGCAGA+AGG 0.537693 3:+46719665 None:intergenic
ATTGTTGGAGGGTTTAGAAA+GGG 0.537791 3:+46721389 None:intergenic
CGATTTCTTCGTCGCTGGGA+GGG 0.537890 3:+46721345 None:intergenic
AGAATCTAATGCCCTCTTGG+TGG 0.539290 3:+46713252 None:intergenic
AAATGGTCTATCATACGTCC+TGG 0.539829 3:+46718041 None:intergenic
AGGTTCTGGAGTAGGAAAGA+AGG 0.541014 3:-46713098 MsG0380013854.01.T01:CDS
TTGTTCTGAATCGGATTCAT+CGG 0.542856 3:+46721304 None:intergenic
TTCAAGGACAGAAGAGATGC+GGG 0.543733 3:-46713164 MsG0380013854.01.T01:CDS
AAAGAGGAAGCGCGAGCGAG+AGG 0.543826 3:-46713659 MsG0380013854.01.T01:intron
GCTTTGCCTGACAGCGATGA+CGG 0.544281 3:-46721062 MsG0380013854.01.T01:CDS
GGGGACAGATAAGAATGAAA+AGG 0.545012 3:-46713326 MsG0380013854.01.T01:CDS
TTGCCAATGGATCAGCAGAA+AGG 0.545359 3:+46717699 None:intergenic
TGCCATTACTGGATCGGGAA+AGG 0.556964 3:-46719323 MsG0380013854.01.T01:intron
AAACAGAGAGGTTCTGGAGT+AGG 0.559387 3:-46713106 MsG0380013854.01.T01:CDS
TCGATTTCTTCGTCGCTGGG+AGG 0.562190 3:+46721344 None:intergenic
GAAGGAATCAGCACTGAAAG+AGG 0.565548 3:+46719652 None:intergenic
CTGTCAGGCAAAGCAACGAC+CGG 0.568261 3:+46721071 None:intergenic
AACAGCAATCTCTCTAAAGT+AGG 0.568717 3:+46719157 None:intergenic
CCCTTTACTCCGGGCTTGCG+AGG 0.569011 3:-46719609 MsG0380013854.01.T01:CDS
TACCTTTCCCGATCCAGTAA+TGG 0.569771 3:+46719321 None:intergenic
TGCATAAAATTGCAGGACAA+GGG 0.571711 3:-46713346 MsG0380013854.01.T01:intron
AAACTAGGTGACATTGTTGG+AGG 0.574748 3:+46721377 None:intergenic
TCTTACTCCAACCAGAGAGT+TGG 0.577727 3:-46719098 MsG0380013854.01.T01:CDS
TGAAGCTATGTTCATCGAGT+GGG 0.577919 3:-46715339 MsG0380013854.01.T01:intron
GCATCATTGGATAAAGAAGA+TGG 0.578009 3:-46713736 MsG0380013854.01.T01:CDS
TTTACGCAATTCCATGTCGG+TGG 0.580627 3:-46718021 MsG0380013854.01.T01:CDS
AAGAAATTACTCCTCGGTCA+AGG 0.583208 3:+46717664 None:intergenic
CATTTGTTACTGATAATGAC+CGG 0.588979 3:-46715278 MsG0380013854.01.T01:CDS
ACAATTTAGGAAGCAGCAAG+TGG 0.589718 3:-46716265 MsG0380013854.01.T01:CDS
ATAACGTGTTGCCTGATTGT+CGG 0.590528 3:-46718408 MsG0380013854.01.T01:CDS
GCATAAAATTGCAGGACAAG+GGG 0.590850 3:-46713345 MsG0380013854.01.T01:intron
TACAGCAAGAGCCGGAAGAG+CGG 0.592856 3:-46715313 MsG0380013854.01.T01:CDS
GCTATTCCAGACTGACATGA+AGG 0.593178 3:-46713140 MsG0380013854.01.T01:CDS
AGACAAATTGAGTTGCAAGA+AGG 0.595575 3:+46719634 None:intergenic
GTGGGTCGTACAGCAAGAGC+CGG 0.596392 3:-46715321 MsG0380013854.01.T01:CDS
GAAGAAAACACAGTCTCCAT+GGG 0.598155 3:-46721192 MsG0380013854.01.T01:CDS
CATGGTTGCGGAAAACAACA+TGG 0.600869 3:+46717772 None:intergenic
AGCAGCTAGGGAGATGTTGG+AGG 0.602032 3:-46713473 MsG0380013854.01.T01:CDS
AAAGACGATCTGCTTCATCA+AGG 0.603651 3:+46717973 None:intergenic
AATAAGATCATCAACCTCCT+CGG 0.603790 3:+46717748 None:intergenic
GAGTATTGAGTGAAGTCCCA+TGG 0.603962 3:+46721176 None:intergenic
TTGTTTATCAGCTTCAGAGT+CGG 0.604156 3:+46721031 None:intergenic
GGAGGGTCGAAGATGAAACT+AGG 0.604347 3:+46721362 None:intergenic
AACTAGGTGACATTGTTGGA+GGG 0.604421 3:+46721378 None:intergenic
ATCATCCAAATCCACCGACA+TGG 0.604844 3:+46718010 None:intergenic
AGCAGTAAAGGCCACCAAGA+GGG 0.611098 3:-46713263 MsG0380013854.01.T01:CDS
AATCATTCAAAAGCAAGTCA+AGG 0.611301 3:-46713069 MsG0380013854.01.T01:CDS
ACAGATAAGAATGAAAAGGC+TGG 0.615478 3:-46713322 MsG0380013854.01.T01:CDS
CAGCAAGAGCCGGAAGAGCG+GGG 0.622096 3:-46715311 MsG0380013854.01.T01:CDS
CTTCAAGGACAGAAGAGATG+CGG 0.622690 3:-46713165 MsG0380013854.01.T01:CDS
TTATATCAGTAAAGTGAGCA+AGG 0.625456 3:+46718427 None:intergenic
TGGATCAGCAGAAAGGCGCA+GGG 0.629746 3:+46717706 None:intergenic
GAAGAAGAAGTCTTTCGCGA+GGG 0.636209 3:+46713184 None:intergenic
TGAAGAAGAAGTCTTTCGCG+AGG 0.636776 3:+46713183 None:intergenic
GCTTCATGGAAATCTTACTC+AGG 0.638431 3:-46716465 MsG0380013854.01.T01:CDS
TTGACTGGTCGTGATATATG+TGG 0.640623 3:-46719349 MsG0380013854.01.T01:CDS
TGTCGGTGGTCTGTCAACAA+AGG 0.642784 3:-46718391 MsG0380013854.01.T01:intron
GTCGGTACGCAAGATCAACA+AGG 0.643394 3:+46713293 None:intergenic
CCATTTACGCAATTCCATGT+CGG 0.645012 3:-46718024 MsG0380013854.01.T01:CDS
ATCAAGGCCAGACATTGTTG+TGG 0.647335 3:-46718069 MsG0380013854.01.T01:CDS
AGAAACATACTCCTAGACGT+TGG 0.653578 3:+46716441 None:intergenic
TTCCGCAACCATGACCGAGG+AGG 0.660276 3:-46717762 MsG0380013854.01.T01:CDS
GTATACCTGGTAAGATCACG+TGG 0.686333 3:+46715480 None:intergenic
ACGTGTTGCCTGATTGTCGG+TGG 0.689730 3:-46718405 MsG0380013854.01.T01:CDS
AAGCAGTAAAGGCCACCAAG+AGG 0.691392 3:-46713264 MsG0380013854.01.T01:CDS
GGATCAGCAGAAAGGCGCAG+GGG 0.709102 3:+46717707 None:intergenic
ACGGCCAGCATCCTTGACCG+AGG 0.711984 3:-46717675 MsG0380013854.01.T01:CDS
TCGGTACGCAAGATCAACAA+GGG 0.722946 3:+46713294 None:intergenic
CAGACTCAGAATCAGAACAG+CGG 0.756911 3:-46721238 MsG0380013854.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAATAAAAAAAAA+AGG + Chr3:46715795-46715814 None:intergenic 0.0%
!! AAATCAAAATATCTTAAATA+AGG + Chr3:46716083-46716102 None:intergenic 10.0%
!! CATATCATATATTATTATAA+AGG + Chr3:46718477-46718496 None:intergenic 10.0%
!!! AGATTTTTATGATAATATAT+TGG - Chr3:46714446-46714465 MsG0380013854.01.T01:intron 10.0%
!!! GATTTTTATGATAATATATT+GGG - Chr3:46714447-46714466 MsG0380013854.01.T01:intron 10.0%
!! AAAAATTATGAAATAGCATA+TGG + Chr3:46716550-46716569 None:intergenic 15.0%
!! AATATTTGATTAAAAATGAG+AGG + Chr3:46716156-46716175 None:intergenic 15.0%
!! ATATAGATCATAAAATGTAA+CGG - Chr3:46715450-46715469 MsG0380013854.01.T01:intron 15.0%
!! TACAAAAAATGGTAAAAAAT+AGG - Chr3:46717078-46717097 MsG0380013854.01.T01:intron 15.0%
!! TCATATTTATCATGTAATAA+AGG - Chr3:46715389-46715408 MsG0380013854.01.T01:intron 15.0%
!! TGATATGAAATTTCATATAA+AGG - Chr3:46718490-46718509 MsG0380013854.01.T01:intron 15.0%
!!! AAGACTTGTTTATAAAATTT+TGG + Chr3:46718533-46718552 None:intergenic 15.0%
!!! AAGTGAATTGTTTTATAATA+AGG - Chr3:46718744-46718763 MsG0380013854.01.T01:intron 15.0%
!!! AATATTGATTTCAATTGATT+AGG - Chr3:46719609-46719628 MsG0380013854.01.T01:CDS 15.0%
!!! AATTGTTTTATAATAAGGTA+AGG - Chr3:46718749-46718768 MsG0380013854.01.T01:intron 15.0%
!!! ATTTGACTTTATTTTATGAT+AGG + Chr3:46714150-46714169 None:intergenic 15.0%
!!! GATTTTTTTTTTCTTTTTCA+GGG - Chr3:46717411-46717430 MsG0380013854.01.T01:intron 15.0%
!!! GTTATTTTTAATTCTTTTCA+CGG - Chr3:46719447-46719466 MsG0380013854.01.T01:intron 15.0%
!!! TATAAAACAATTCACTTTTT+AGG + Chr3:46718741-46718760 None:intergenic 15.0%
!!! TTATTTAATTTCTACTGAAA+GGG - Chr3:46718068-46718087 MsG0380013854.01.T01:CDS 15.0%
!!! TTATTTTTAATTCTTTTCAC+GGG - Chr3:46719448-46719467 MsG0380013854.01.T01:intron 15.0%
!!! TTTAAGATATTTTGATTTGA+TGG - Chr3:46716085-46716104 MsG0380013854.01.T01:intron 15.0%
!!! TTTCATTTTTTATTAACATC+AGG + Chr3:46720652-46720671 None:intergenic 15.0%
!! AAACTGTAAGATAAACTATT+AGG - Chr3:46717202-46717221 MsG0380013854.01.T01:intron 20.0%
!! AAATGAATAGAGGAATTAAA+TGG - Chr3:46718374-46718393 MsG0380013854.01.T01:intron 20.0%
!! AACATATTTGATTGTTTAAC+AGG - Chr3:46716599-46716618 MsG0380013854.01.T01:intron 20.0%
!! AAGATAAACTAAGTTATTAG+AGG + Chr3:46713438-46713457 None:intergenic 20.0%
!! AATCTTTGCATTATATGAAT+TGG - Chr3:46714949-46714968 MsG0380013854.01.T01:intron 20.0%
!! ACAGAAATAGCTTATAATAT+AGG - Chr3:46713494-46713513 MsG0380013854.01.T01:CDS 20.0%
!! ATATAATGCAAAGATTCAAA+AGG + Chr3:46714945-46714964 None:intergenic 20.0%
!! ATGTATATGTATGAACATAT+AGG - Chr3:46715527-46715546 MsG0380013854.01.T01:CDS 20.0%
!! CATAGATTGAAGATTATATT+TGG - Chr3:46717909-46717928 MsG0380013854.01.T01:intron 20.0%
!! CTAAAATTAGAAAAAGAAAG+TGG - Chr3:46719550-46719569 MsG0380013854.01.T01:intron 20.0%
!! GAAATTATTAAAGTAGTTAG+AGG + Chr3:46717854-46717873 None:intergenic 20.0%
!! GATTAAATCAGAAAGTAAAA+TGG + Chr3:46716789-46716808 None:intergenic 20.0%
!! TAAAATATGAACATGTCATT+AGG - Chr3:46713796-46713815 MsG0380013854.01.T01:intron 20.0%
!! TAAACTTATGACTTATGTAA+TGG - Chr3:46714343-46714362 MsG0380013854.01.T01:intron 20.0%
!! TAACTTTCTATATATGGTTA+AGG - Chr3:46721015-46721034 MsG0380013854.01.T01:intron 20.0%
!! TATAGATCATAAAATGTAAC+GGG - Chr3:46715451-46715470 MsG0380013854.01.T01:intron 20.0%
!! TCAAAATATCTTAAATAAGG+CGG + Chr3:46716080-46716099 None:intergenic 20.0%
!! TGACAAAATTACAAATATAG+CGG - Chr3:46716856-46716875 MsG0380013854.01.T01:intron 20.0%
!! TGTAATGTATATTAGGAATT+AGG - Chr3:46717661-46717680 MsG0380013854.01.T01:intron 20.0%
!! TGTTAAATCTATATCCAAAA+TGG + Chr3:46718857-46718876 None:intergenic 20.0%
!! TTACATAAGTCATAAGTTTA+TGG + Chr3:46714343-46714362 None:intergenic 20.0%
!! TTACATATAAACTGTACATA+AGG - Chr3:46720831-46720850 MsG0380013854.01.T01:intron 20.0%
!! TTATGATAATATATTGGGTT+TGG - Chr3:46714452-46714471 MsG0380013854.01.T01:intron 20.0%
!!! ACAATGATTTTTGAATCATA+GGG + Chr3:46716523-46716542 None:intergenic 20.0%
!!! AGAGAAACATAAATTTGTTA+AGG - Chr3:46718338-46718357 MsG0380013854.01.T01:intron 20.0%
!!! ATTCATCTTATTTTTAGAAG+TGG - Chr3:46714501-46714520 MsG0380013854.01.T01:intron 20.0%
!!! ATTGTTTGTTCTTTTTTTCT+AGG + Chr3:46718627-46718646 None:intergenic 20.0%
!!! ATTTTTCTTGTCATATTTGT+TGG - Chr3:46716564-46716583 MsG0380013854.01.T01:intron 20.0%
!!! CGATTTTTTTTTTCTTTTTC+AGG - Chr3:46717410-46717429 MsG0380013854.01.T01:intron 20.0%
!!! GAAAATCGATAATTTTTTTG+TGG - Chr3:46714642-46714661 MsG0380013854.01.T01:intron 20.0%
!!! GAGAAACATAAATTTGTTAA+GGG - Chr3:46718339-46718358 MsG0380013854.01.T01:intron 20.0%
!!! GATTTATTAGATTTCTTTTG+AGG + Chr3:46721213-46721232 None:intergenic 20.0%
!!! GTTATTTAATTTCTACTGAA+AGG - Chr3:46718067-46718086 MsG0380013854.01.T01:CDS 20.0%
!!! TAATTGTTTGTTATCATTCT+TGG - Chr3:46715365-46715384 MsG0380013854.01.T01:intron 20.0%
!!! TTAAGTTGTTTATCCAAATA+AGG + Chr3:46713520-46713539 None:intergenic 20.0%
!!! TTGTTTGTTCTTTTTTTCTA+GGG + Chr3:46718626-46718645 None:intergenic 20.0%
!!! TTTACCATTTTTTGTACTAT+AGG + Chr3:46717074-46717093 None:intergenic 20.0%
!!! TTTTTGTTTTTAACATACTC+TGG - Chr3:46715657-46715676 MsG0380013854.01.T01:intron 20.0%
! AAAAAAAATCGCAAGTGTTA+TGG + Chr3:46717401-46717420 None:intergenic 25.0%
! AAAATGAAATGACTGTTAAC+AGG - Chr3:46720663-46720682 MsG0380013854.01.T01:intron 25.0%
! AAATGGTAAAAAATAGGCTT+AGG - Chr3:46717084-46717103 MsG0380013854.01.T01:intron 25.0%
! AAATGTAAAGGATGAGAAAA+TGG + Chr3:46720061-46720080 None:intergenic 25.0%
! AAATTACATTCTGTAATCCA+AGG + Chr3:46719917-46719936 None:intergenic 25.0%
! AACTATTAGGAAAGATTTAG+AGG - Chr3:46717215-46717234 MsG0380013854.01.T01:intron 25.0%
! AATAGAGGAATTAAATGGAA+GGG - Chr3:46718379-46718398 MsG0380013854.01.T01:intron 25.0%
! AATGTAATGCATAAAATTGC+AGG - Chr3:46721068-46721087 MsG0380013854.01.T01:CDS 25.0%
! AGCAAAAAAATAACCTGAAT+TGG + Chr3:46714861-46714880 None:intergenic 25.0%
! ATATGTATGAACATATAGGA+TGG - Chr3:46715531-46715550 MsG0380013854.01.T01:CDS 25.0%
! ATATTATAGACCAGATACAT+CGG - Chr3:46718703-46718722 MsG0380013854.01.T01:intron 25.0%
! CTTCCTATAATTGTAACAAA+CGG - Chr3:46717739-46717758 MsG0380013854.01.T01:CDS 25.0%
! GCACAAATAAAAAATAGCAA+AGG + Chr3:46716285-46716304 None:intergenic 25.0%
! GCTATTTAAGTAACAAAACA+TGG + Chr3:46714071-46714090 None:intergenic 25.0%
! TAAAGATTGCAGAACATATA+AGG + Chr3:46720546-46720565 None:intergenic 25.0%
! TAAGTTATTAGAGGCTATAA+TGG + Chr3:46713429-46713448 None:intergenic 25.0%
! TAATTAGCTCAGATATAATG+AGG + Chr3:46719041-46719060 None:intergenic 25.0%
! TATTTAAGTGACAAAATTGC+AGG + Chr3:46719015-46719034 None:intergenic 25.0%
! TCAAATAATCCAATCCAAAT+AGG - Chr3:46714316-46714335 MsG0380013854.01.T01:intron 25.0%
! TCACAAGAAAGATTATATAG+TGG + Chr3:46719590-46719609 None:intergenic 25.0%
! TTTATCACATAAGTGCTTAT+GGG + Chr3:46713900-46713919 None:intergenic 25.0%
! TTTGTGATATGTAACCATAT+AGG - Chr3:46714885-46714904 MsG0380013854.01.T01:intron 25.0%
!! AAGATAATGATAGTGAAACT+AGG - Chr3:46718307-46718326 MsG0380013854.01.T01:intron 25.0%
!! AGTCACTTAATTTTACTTCA+GGG - Chr3:46718876-46718895 MsG0380013854.01.T01:intron 25.0%
!! ATAATATATTGGGTTTGGTT+AGG - Chr3:46714457-46714476 MsG0380013854.01.T01:intron 25.0%
!! ATACTTGTTGAGAAAATCTT+AGG + Chr3:46720497-46720516 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + Chr3:46714106-46714125 None:intergenic 25.0%
!! GAATGTTCTTTTCTTTTACA+TGG - Chr3:46715473-46715492 MsG0380013854.01.T01:intron 25.0%
!! GACAATGATTTTTGAATCAT+AGG + Chr3:46716524-46716543 None:intergenic 25.0%
!! GTTTATCTTACAGTTTTTCT+AGG + Chr3:46717198-46717217 None:intergenic 25.0%
!! TACAGAATGTAATTTTTGCT+TGG - Chr3:46719922-46719941 MsG0380013854.01.T01:intron 25.0%
!! TACTTGTTGAGAAAATCTTA+GGG + Chr3:46720496-46720515 None:intergenic 25.0%
!! TGTTTTATAATAAGGTAAGG+CGG - Chr3:46718752-46718771 MsG0380013854.01.T01:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + Chr3:46714105-46714124 None:intergenic 25.0%
!! TTGGAAATTAACTTAGTCTT+AGG + Chr3:46720456-46720475 None:intergenic 25.0%
!! TTTCCGTTTGTTACAATTAT+AGG + Chr3:46717745-46717764 None:intergenic 25.0%
!!! AAGATTATATTTGGATTAGC+TGG - Chr3:46717918-46717937 MsG0380013854.01.T01:intron 25.0%
!!! ACTTTCTGTTACTTCTATTT+TGG - Chr3:46715124-46715143 MsG0380013854.01.T01:intron 25.0%
!!! AGGTCTTAGTCTTATATATA+AGG - Chr3:46720376-46720395 MsG0380013854.01.T01:intron 25.0%
!!! ATAAGTTGTTTTCTGATTGA+TGG - Chr3:46714595-46714614 MsG0380013854.01.T01:intron 25.0%
!!! ATTTTTGAAGTACTTCTTTG+TGG - Chr3:46715877-46715896 MsG0380013854.01.T01:intron 25.0%
!!! CACTTTAGAAGTAAAAGTTT+TGG + Chr3:46717497-46717516 None:intergenic 25.0%
!!! CTATTTCTGAATATGAATAC+AGG - Chr3:46717618-46717637 MsG0380013854.01.T01:intron 25.0%
!!! CTTATAATATAGGCCTTATT+TGG - Chr3:46713504-46713523 MsG0380013854.01.T01:CDS 25.0%
!!! CTTGAGTTAGTGAAATTTTT+TGG - Chr3:46717581-46717600 MsG0380013854.01.T01:intron 25.0%
!!! GAATAGTTATTTCTCTGTAA+AGG + Chr3:46719333-46719352 None:intergenic 25.0%
!!! GATAATTTTTTTGTGGTTGT+GGG - Chr3:46714649-46714668 MsG0380013854.01.T01:intron 25.0%
!!! GGTCTTAGTCTTATATATAA+GGG - Chr3:46720377-46720396 MsG0380013854.01.T01:intron 25.0%
!!! GTTGTTTTCATAAACTATCT+TGG - Chr3:46713592-46713611 MsG0380013854.01.T01:intron 25.0%
!!! TAAAGGCATTTCAGATATTT+AGG - Chr3:46715406-46715425 MsG0380013854.01.T01:intron 25.0%
!!! TATATTTTTCAAGACGAAAG+AGG + Chr3:46714912-46714931 None:intergenic 25.0%
!!! TCAGTTACTTTTGTTTTACT+TGG - Chr3:46719884-46719903 MsG0380013854.01.T01:intron 25.0%
!!! TGATTTTGAATCTTGTTGTT+AGG - Chr3:46715029-46715048 MsG0380013854.01.T01:intron 25.0%
!!! TGTTTGTTCTTTTTTTCTAG+GGG + Chr3:46718625-46718644 None:intergenic 25.0%
!!! TTTTTTTTTCTTTTTCAGGG+TGG - Chr3:46717414-46717433 MsG0380013854.01.T01:intron 25.0%
AAAATAACCTGAATTGGTGT+TGG + Chr3:46714855-46714874 None:intergenic 30.0%
AAAATAGCAAAGGAGACAAT+CGG + Chr3:46716275-46716294 None:intergenic 30.0%
AAAGTGAAGAAATTACTCCT+CGG + Chr3:46716766-46716785 None:intergenic 30.0%
AACAATTATGCGATACTTAC+TGG + Chr3:46715353-46715372 None:intergenic 30.0%
AAGATTAAATAGAGGAGAGT+CGG - Chr3:46717150-46717169 MsG0380013854.01.T01:intron 30.0%
AAGTTGCTTATAAATGTGAC+CGG - Chr3:46713765-46713784 MsG0380013854.01.T01:intron 30.0%
AAGTTGCTTATAAATGTGAC+CGG + Chr3:46713784-46713765 None:intergenic 30.0%
AATCATTCAAAAGCAAGTCA+AGG - Chr3:46721352-46721371 MsG0380013854.01.T01:CDS 30.0%
ACAATTATGCGATACTTACT+GGG + Chr3:46715352-46715371 None:intergenic 30.0%
ACCATATATAGAAAGTTAGC+AGG + Chr3:46721013-46721032 None:intergenic 30.0%
ACCTCTGTGTAATGTATATT+AGG - Chr3:46717654-46717673 MsG0380013854.01.T01:intron 30.0%
ACCTGCTAACTTTCTATATA+TGG - Chr3:46721009-46721028 MsG0380013854.01.T01:intron 30.0%
ACGAAGAGAAGATTAAATAG+AGG - Chr3:46717142-46717161 MsG0380013854.01.T01:intron 30.0%
ACTAATGATCCACTAGAAAA+TGG + Chr3:46720297-46720316 None:intergenic 30.0%
AGATTTAGAGGTTAATGAGT+TGG - Chr3:46717227-46717246 MsG0380013854.01.T01:intron 30.0%
AGCACCTATAGTACAAAAAA+TGG - Chr3:46717067-46717086 MsG0380013854.01.T01:intron 30.0%
AGTTACAGCAATTCTCTAAA+TGG + Chr3:46719194-46719213 None:intergenic 30.0%
ATAGCATATGTGTATCACTA+TGG + Chr3:46720433-46720452 None:intergenic 30.0%
ATATGTGTATCACTATGGTT+AGG + Chr3:46720428-46720447 None:intergenic 30.0%
ATCTGGTCTATAATATAGAC+TGG + Chr3:46718699-46718718 None:intergenic 30.0%
ATTAAAGTGAATTGTCTCCA+AGG + Chr3:46718665-46718684 None:intergenic 30.0%
ATTAAATGGAAGGGAGATAA+AGG - Chr3:46718388-46718407 MsG0380013854.01.T01:intron 30.0%
CACTATCATTATCTTGAGTT+GGG + Chr3:46718302-46718321 None:intergenic 30.0%
CATAAGTTTATGGACCTATT+TGG + Chr3:46714333-46714352 None:intergenic 30.0%
GAACTCTGCAAAAAGTAATT+AGG + Chr3:46715958-46715977 None:intergenic 30.0%
GAATAGAGGAATTAAATGGA+AGG - Chr3:46718378-46718397 MsG0380013854.01.T01:intron 30.0%
GAGAAAATCTTAGGGATTTA+CGG + Chr3:46720488-46720507 None:intergenic 30.0%
GATAAGTTATTGTGTTCGTT+GGG - Chr3:46718415-46718434 MsG0380013854.01.T01:CDS 30.0%
GATTATATGTACCTTTATGC+TGG - Chr3:46719398-46719417 MsG0380013854.01.T01:intron 30.0%
GCTAATTTGAATTTATCGAC+TGG + Chr3:46713864-46713883 None:intergenic 30.0%
GTTTATCACATAAGTGCTTA+TGG + Chr3:46713901-46713920 None:intergenic 30.0%
TAAGCACTTGTGAAAATCTT+CGG + Chr3:46714281-46714300 None:intergenic 30.0%
TATAAGACTAAGACCTTGAA+TGG + Chr3:46720372-46720391 None:intergenic 30.0%
TATAGTTCATAGAGTATACC+TGG + Chr3:46718957-46718976 None:intergenic 30.0%
TATATAGAAAGTTAGCAGGT+AGG + Chr3:46721009-46721028 None:intergenic 30.0%
TCAAATTAGCCAATACAAAC+AGG - Chr3:46713874-46713893 MsG0380013854.01.T01:intron 30.0%
TCACTATCATTATCTTGAGT+TGG + Chr3:46718303-46718322 None:intergenic 30.0%
TCAGTGCTCAAATTCTAATT+AGG - Chr3:46715754-46715773 MsG0380013854.01.T01:intron 30.0%
TCCTAATATACATTACACAG+AGG + Chr3:46717658-46717677 None:intergenic 30.0%
TCTATTCATTTGAACCAAAC+AGG + Chr3:46718365-46718384 None:intergenic 30.0%
TCTTAGAAGAAATGATCCTA+AGG - Chr3:46719830-46719849 MsG0380013854.01.T01:intron 30.0%
TTATATCAGTAAAGTGAGCA+AGG + Chr3:46715997-46716016 None:intergenic 30.0%
TTATGGTAAAACCATGCATA+CGG + Chr3:46717384-46717403 None:intergenic 30.0%
TTCAATTGATTAGGCAAAGA+GGG - Chr3:46719618-46719637 MsG0380013854.01.T01:CDS 30.0%
TTTATTGACCGGAAATGTAA+AGG + Chr3:46720073-46720092 None:intergenic 30.0%
TTTCAATTGATTAGGCAAAG+AGG - Chr3:46719617-46719636 MsG0380013854.01.T01:CDS 30.0%
TTTCTCATCCTTTACATTTC+CGG - Chr3:46720062-46720081 MsG0380013854.01.T01:intron 30.0%
TTTCTCTTCATCACATTGTT+CGG - Chr3:46716175-46716194 MsG0380013854.01.T01:intron 30.0%
! AAGCTATTCTAGAGAGTTTA+TGG + Chr3:46713963-46713982 None:intergenic 30.0%
! AAGTGAGTGATTTTATTGAC+CGG + Chr3:46720084-46720103 None:intergenic 30.0%
! ACATATAGGATGGATTTCTA+TGG - Chr3:46715541-46715560 MsG0380013854.01.T01:CDS 30.0%
! ACTGTTTTCGTATAAGCTAT+AGG - Chr3:46713570-46713589 MsG0380013854.01.T01:intron 30.0%
! AGAAGCACATATCTTTATTC+CGG + Chr3:46716112-46716131 None:intergenic 30.0%
! ATTCTAAGAACAATCCGATT+AGG - Chr3:46720319-46720338 MsG0380013854.01.T01:intron 30.0%
! CAGTCACTTAATTTTACTTC+AGG - Chr3:46718875-46718894 MsG0380013854.01.T01:intron 30.0%
! CATTTGTTACTGATAATGAC+CGG - Chr3:46719143-46719162 MsG0380013854.01.T01:CDS 30.0%
! CGTTTGTTACAATTATAGGA+AGG + Chr3:46717741-46717760 None:intergenic 30.0%
! TAATGAGTTGGATCCAAATA+TGG - Chr3:46717239-46717258 MsG0380013854.01.T01:intron 30.0%
! TCACTTCTGGTTATTTGTAT+AGG - Chr3:46718126-46718145 MsG0380013854.01.T01:intron 30.0%
! TGTAACAAACCAGTTCTTTT+GGG + Chr3:46720163-46720182 None:intergenic 30.0%
! TGTTTGGTTCAAATGAATAG+AGG - Chr3:46718364-46718383 MsG0380013854.01.T01:intron 30.0%
! TTACATTTTCAGTAAGAGTG+AGG + Chr3:46721055-46721074 None:intergenic 30.0%
! TTCATATTTTATACTCCCTC+CGG + Chr3:46713787-46713806 None:intergenic 30.0%
! TTCTAAGAACAATCCGATTA+GGG - Chr3:46720320-46720339 MsG0380013854.01.T01:intron 30.0%
! TTGATTCTTCCATTTTCTAG+TGG - Chr3:46720285-46720304 MsG0380013854.01.T01:intron 30.0%
!! AGAGTGTTTTTCATGCTTTT+TGG - Chr3:46716918-46716937 MsG0380013854.01.T01:intron 30.0%
!! GAGTGTTTTTCATGCTTTTT+GGG - Chr3:46716919-46716938 MsG0380013854.01.T01:intron 30.0%
!! TATAGGCTTTGGAACAATTT+AGG - Chr3:46718143-46718162 MsG0380013854.01.T01:intron 30.0%
!! TTCTGTTACTTCTATTTTGG+TGG - Chr3:46715127-46715146 MsG0380013854.01.T01:intron 30.0%
!! TTTCTCATTTTGATATGCAG+TGG - Chr3:46717870-46717889 MsG0380013854.01.T01:intron 30.0%
!!! AATAGTTTTGGAAATGAGAG+AGG + Chr3:46721394-46721413 None:intergenic 30.0%
!!! CAATTGTTGTTTTTCATCCT+AGG - Chr3:46716310-46716329 MsG0380013854.01.T01:intron 30.0%
!!! CGATAATTTTTTTGTGGTTG+TGG - Chr3:46714648-46714667 MsG0380013854.01.T01:intron 30.0%
!!! CTTCTAAAGTGATCATTTTC+AGG - Chr3:46717506-46717525 MsG0380013854.01.T01:intron 30.0%
!!! GATATTTTGATTTGATGGAC+CGG - Chr3:46716090-46716109 MsG0380013854.01.T01:intron 30.0%
!!! TACTGATTTTACCTTTCCTA+TGG - Chr3:46719363-46719382 MsG0380013854.01.T01:CDS 30.0%
!!! TATGTAGTTTTATGCTCTGT+AGG - Chr3:46714973-46714992 MsG0380013854.01.T01:intron 30.0%
!!! TTTTACTTGGCTTTAATCCT+TGG - Chr3:46719897-46719916 MsG0380013854.01.T01:intron 30.0%
!!! TTTTGAATCTTGTTGTTAGG+CGG - Chr3:46715032-46715051 MsG0380013854.01.T01:intron 30.0%
AAAACGTGTGCATGCAATAA+GGG - Chr3:46715293-46715312 MsG0380013854.01.T01:CDS 35.0%
AAACTTAGGTAGTGTTTGGT+TGG + Chr3:46718805-46718824 None:intergenic 35.0%
AAGAATGCGTGAAGTAAATC+AGG - Chr3:46717447-46717466 MsG0380013854.01.T01:intron 35.0%
AAGCACTTGTGAAAATCTTC+GGG + Chr3:46714280-46714299 None:intergenic 35.0%
AAGCACTTGTGAAACCAATT+CGG + Chr3:46713838-46713857 None:intergenic 35.0%
AAGGGATTAGGAGTAAACTT+AGG + Chr3:46718819-46718838 None:intergenic 35.0%
AAGTATCATGCATGTGAAGA+AGG - Chr3:46720511-46720530 MsG0380013854.01.T01:intron 35.0%
AAGTTTACTCCTAATCCCTT+TGG - Chr3:46718819-46718838 MsG0380013854.01.T01:intron 35.0%
AATAAGATCATCAACCTCCT+CGG + Chr3:46716676-46716695 None:intergenic 35.0%
ACACACAATTGATCCCTAAT+CGG + Chr3:46720336-46720355 None:intergenic 35.0%
ACAGATAAGAATGAAAAGGC+TGG - Chr3:46721099-46721118 MsG0380013854.01.T01:CDS 35.0%
ACCTCAAAATGAAGGAAAAG+AGG - Chr3:46720746-46720765 MsG0380013854.01.T01:intron 35.0%
AGAAAGTGGACATGTTAATC+AGG - Chr3:46719564-46719583 MsG0380013854.01.T01:intron 35.0%
AGAGAAGGAGAAGAAGATTT+CGG - Chr3:46720182-46720201 MsG0380013854.01.T01:intron 35.0%
AGATGGTTCTTCTCATAAGA+TGG - Chr3:46720702-46720721 MsG0380013854.01.T01:intron 35.0%
ATATCTTAAATAAGGCGGCA+TGG + Chr3:46716075-46716094 None:intergenic 35.0%
ATATTACTACCTCCATTCCT+TGG - Chr3:46718645-46718664 MsG0380013854.01.T01:intron 35.0%
ATGAAACTAGGTGACATTGT+TGG + Chr3:46713050-46713069 None:intergenic 35.0%
ATGCATAAAATTGCAGGACA+AGG - Chr3:46721074-46721093 MsG0380013854.01.T01:CDS 35.0%
ATTGTTGGAGGGTTTAGAAA+GGG + Chr3:46713035-46713054 None:intergenic 35.0%
CATTGAATAACCGATGTATC+TGG + Chr3:46718716-46718735 None:intergenic 35.0%
CGAAAACATGATTGCACATA+GGG - Chr3:46720121-46720140 MsG0380013854.01.T01:intron 35.0%
CTACATCTATTATCCTCCAA+TGG + Chr3:46715857-46715876 None:intergenic 35.0%
CTCACTTTGTATGATATTGC+AGG - Chr3:46720097-46720116 MsG0380013854.01.T01:intron 35.0%
CTGGTTATTTGTATAGGCTT+TGG - Chr3:46718132-46718151 MsG0380013854.01.T01:intron 35.0%
GAAGAAGAAGATGAAGAAGA+TGG - Chr3:46714702-46714721 MsG0380013854.01.T01:intron 35.0%
GAATCAATGCCTCAATTTAG+AGG + Chr3:46720272-46720291 None:intergenic 35.0%
GAGTAAACTTAGGTAGTGTT+TGG + Chr3:46718809-46718828 None:intergenic 35.0%
GATTAATCAAGAACCTCCAT+TGG - Chr3:46715838-46715857 MsG0380013854.01.T01:intron 35.0%
GCATCATTGGATAAAGAAGA+TGG - Chr3:46720685-46720704 MsG0380013854.01.T01:intron 35.0%
GCTCTATCATACACCATATT+TGG + Chr3:46717255-46717274 None:intergenic 35.0%
GGATAAGTTATTGTGTTCGT+TGG - Chr3:46718414-46718433 MsG0380013854.01.T01:CDS 35.0%
GGCATTATTCCTCTAAATTG+AGG - Chr3:46720260-46720279 MsG0380013854.01.T01:intron 35.0%
GGTAAAAAATAGGCTTAGGT+GGG - Chr3:46717088-46717107 MsG0380013854.01.T01:intron 35.0%
GTAACTGATCAAAACCTTTG+TGG + Chr3:46719872-46719891 None:intergenic 35.0%
GTCTCAAGTAATTGAGCAAA+TGG - Chr3:46719692-46719711 MsG0380013854.01.T01:CDS 35.0%
GTGACAGTTAATCACTTGTT+TGG + Chr3:46720590-46720609 None:intergenic 35.0%
GTTTATGGACCTATTTGGAT+TGG + Chr3:46714328-46714347 None:intergenic 35.0%
TATTAAAGCGACCAGCATAA+AGG + Chr3:46719412-46719431 None:intergenic 35.0%
TCAAGTAATTGAGCAAATGG+AGG - Chr3:46719695-46719714 MsG0380013854.01.T01:CDS 35.0%
TCTTCTTCATCTTCTTCTTC+TGG + Chr3:46714702-46714721 None:intergenic 35.0%
TGCATAAAATTGCAGGACAA+GGG - Chr3:46721075-46721094 MsG0380013854.01.T01:CDS 35.0%
TGGTAAAAAATAGGCTTAGG+TGG - Chr3:46717087-46717106 MsG0380013854.01.T01:intron 35.0%
TTATAGAACCCCTCCAATAT+TGG + Chr3:46718565-46718584 None:intergenic 35.0%
TTCTAAACCAACACCAATTC+AGG - Chr3:46714845-46714864 MsG0380013854.01.T01:intron 35.0%
TTGTTTATCAGCTTCAGAGT+CGG + Chr3:46713393-46713412 None:intergenic 35.0%
TTTCAGATATTTAGGTGTGC+CGG - Chr3:46715414-46715433 MsG0380013854.01.T01:intron 35.0%
! AGAAGTGGTTTTCTGATTGA+TGG - Chr3:46714516-46714535 MsG0380013854.01.T01:intron 35.0%
! AGACAAATTGAGTTGCAAGA+AGG + Chr3:46714790-46714809 None:intergenic 35.0%
! AGGATTTAGTGCTGAAATTC+AGG - Chr3:46716478-46716497 MsG0380013854.01.T01:CDS 35.0%
! ATTTTACCTTTCCTATGGTC+TGG - Chr3:46719368-46719387 MsG0380013854.01.T01:CDS 35.0%
! CCTATGTGCAATCATGTTTT+CGG + Chr3:46720123-46720142 None:intergenic 35.0%
! CTGATTGATGGATGAATGTT+GGG - Chr3:46714607-46714626 MsG0380013854.01.T01:intron 35.0%
! CTGTAACAAACCAGTTCTTT+TGG + Chr3:46720164-46720183 None:intergenic 35.0%
! GTGATTAACTGTCACGTTTT+TGG - Chr3:46720595-46720614 MsG0380013854.01.T01:intron 35.0%
! TCCTCTTTTCCTTCATTTTG+AGG + Chr3:46720750-46720769 None:intergenic 35.0%
! TCTGATTGATGGATGAATGT+TGG - Chr3:46714606-46714625 MsG0380013854.01.T01:intron 35.0%
! TGGTGTATGATAGAGCATTA+TGG - Chr3:46717259-46717278 MsG0380013854.01.T01:intron 35.0%
! TTCAGCATTGAATGCTATTG+TGG - Chr3:46718093-46718112 MsG0380013854.01.T01:intron 35.0%
! TTGTTCTGAATCGGATTCAT+CGG + Chr3:46713120-46713139 None:intergenic 35.0%
! TTTTATCCTTCATGTCAGTC+TGG + Chr3:46721290-46721309 None:intergenic 35.0%
! TTTTCTTAAGATCGCCGAAT+TGG - Chr3:46713821-46713840 MsG0380013854.01.T01:intron 35.0%
!! AAATTTGTTAAGGGCCTGTT+TGG - Chr3:46718348-46718367 MsG0380013854.01.T01:intron 35.0%
!! AACAGCAATCTCTCTAAAGT+AGG + Chr3:46715267-46715286 None:intergenic 35.0%
!! ACTGTTTCTTTTAACACCCT+TGG - Chr3:46715201-46715220 MsG0380013854.01.T01:intron 35.0%
!! ATGTTGACTCTGCTAGTAAT+TGG - Chr3:46719478-46719497 MsG0380013854.01.T01:intron 35.0%
!! CAATAGCTTTTAGAAGTGAC+CGG + Chr3:46719165-46719184 None:intergenic 35.0%
!! TGTATACCATTAGCATTGAC+TGG - Chr3:46715057-46715076 MsG0380013854.01.T01:intron 35.0%
!!! AACATGGTCTGCCTTTTTTT+GGG + Chr3:46716636-46716655 None:intergenic 35.0%
!!! AGACCTTGCTTTTTAAGTCA+CGG - Chr3:46714413-46714432 MsG0380013854.01.T01:intron 35.0%
!!! TGTTCTTTTTTTCTAGGGGA+GGG + Chr3:46718621-46718640 None:intergenic 35.0%
!!! TTGTTCTTTTTTTCTAGGGG+AGG + Chr3:46718622-46718641 None:intergenic 35.0%
!!! TTTTTTGTGGTTGTGGGATT+GGG - Chr3:46714655-46714674 MsG0380013854.01.T01:intron 35.0%
!!! TTTTTTTGTGGTTGTGGGAT+TGG - Chr3:46714654-46714673 MsG0380013854.01.T01:intron 35.0%
AAACTAGGTGACATTGTTGG+AGG + Chr3:46713047-46713066 None:intergenic 40.0%
AAAGACGATCTGCTTCATCA+AGG + Chr3:46716451-46716470 None:intergenic 40.0%
AAATGGTCTATCATACGTCC+TGG + Chr3:46716383-46716402 None:intergenic 40.0%
AACTAGGTGACATTGTTGGA+GGG + Chr3:46713046-46713065 None:intergenic 40.0%
AACTTTCTGCGCTTCTTTCT+AGG + Chr3:46720925-46720944 None:intergenic 40.0%
AAGAAATTACTCCTCGGTCA+AGG + Chr3:46716760-46716779 None:intergenic 40.0%
AAGACGAAAGAGGTCCTATA+TGG + Chr3:46714902-46714921 None:intergenic 40.0%
ACAATTTAGGAAGCAGCAAG+TGG - Chr3:46718156-46718175 MsG0380013854.01.T01:intron 40.0%
ACGTATTCTCATTGAAGCTC+AGG + Chr3:46715603-46715622 None:intergenic 40.0%
AGAAACATACTCCTAGACGT+TGG + Chr3:46717983-46718002 None:intergenic 40.0%
AGAAGAAAACACAGTCTCCA+TGG - Chr3:46713228-46713247 MsG0380013854.01.T01:CDS 40.0%
AGCTGAAGACCTCAAAATGA+AGG - Chr3:46720738-46720757 MsG0380013854.01.T01:intron 40.0%
AGGATGTTGTATTGGATGAG+TGG - Chr3:46716986-46717005 MsG0380013854.01.T01:intron 40.0%
AGTGAATTGTCTCCAAGGAA+TGG + Chr3:46718660-46718679 None:intergenic 40.0%
ATAACGTGTTGCCTGATTGT+CGG - Chr3:46716013-46716032 MsG0380013854.01.T01:intron 40.0%
ATAGATTGCTCTGCAACATG+CGG + Chr3:46719663-46719682 None:intergenic 40.0%
ATGGAAGGGAGATAAAGGAT+TGG - Chr3:46718393-46718412 MsG0380013854.01.T01:CDS 40.0%
ATGGCAATAGCAAATGCCAA+AGG + Chr3:46718838-46718857 None:intergenic 40.0%
CAAAACGTGTGCATGCAATA+AGG - Chr3:46715292-46715311 MsG0380013854.01.T01:CDS 40.0%
CAGAGCAATCTATACTCAAG+TGG - Chr3:46719670-46719689 MsG0380013854.01.T01:CDS 40.0%
CAGTTAATCACTTGTTTGGC+TGG + Chr3:46720586-46720605 None:intergenic 40.0%
CATCTATTATCCTCCAATGG+AGG + Chr3:46715854-46715873 None:intergenic 40.0%
CATTGTTGGAGGGTTTAGAA+AGG + Chr3:46713036-46713055 None:intergenic 40.0%
CCATTTACGCAATTCCATGT+CGG - Chr3:46716397-46716416 MsG0380013854.01.T01:intron 40.0%
CCGAAAACATGATTGCACAT+AGG - Chr3:46720120-46720139 MsG0380013854.01.T01:intron 40.0%
CTACCGTGACTTAAAAAGCA+AGG + Chr3:46714419-46714438 None:intergenic 40.0%
CTCTGGTTGGAGTAAGAATA+AGG + Chr3:46715320-46715339 None:intergenic 40.0%
CTTGAATAACTCGCAGTGAA+AGG + Chr3:46719270-46719289 None:intergenic 40.0%
GAAACATACTCCTAGACGTT+GGG + Chr3:46717982-46718001 None:intergenic 40.0%
GAAGAAAACACAGTCTCCAT+GGG - Chr3:46713229-46713248 MsG0380013854.01.T01:CDS 40.0%
GAGAATACGTACTCAGTTCA+TGG - Chr3:46715613-46715632 MsG0380013854.01.T01:intron 40.0%
GATAAAAAGCCGAAACAGAG+AGG - Chr3:46721303-46721322 MsG0380013854.01.T01:CDS 40.0%
GATAGCAGGATAATGACCAA+GGG + Chr3:46715220-46715239 None:intergenic 40.0%
GATCCACGCATAACAAGATT+GGG + Chr3:46720800-46720819 None:intergenic 40.0%
GATCCTAAGGAAAGCTGAAA+TGG - Chr3:46719843-46719862 MsG0380013854.01.T01:intron 40.0%
GCATAAAATTGCAGGACAAG+GGG - Chr3:46721076-46721095 MsG0380013854.01.T01:CDS 40.0%
GCTGATATTCCTCTAAATGC+AGG - Chr3:46720239-46720258 MsG0380013854.01.T01:intron 40.0%
GCTTCATGGAAATCTTACTC+AGG - Chr3:46717956-46717975 MsG0380013854.01.T01:CDS 40.0%
GGAATAATGCCTGCATTTAG+AGG + Chr3:46720251-46720270 None:intergenic 40.0%
GGATTTACGGTAGAATCGAT+TGG + Chr3:46720475-46720494 None:intergenic 40.0%
GGGGACAGATAAGAATGAAA+AGG - Chr3:46721095-46721114 MsG0380013854.01.T01:CDS 40.0%
GTCGGATCAAAAGAGGTAAA+AGG - Chr3:46717168-46717187 MsG0380013854.01.T01:intron 40.0%
GTCTTCTCCTGATTGAGATT+CGG + Chr3:46713150-46713169 None:intergenic 40.0%
TAATCAAGAACCTCCATTGG+AGG - Chr3:46715841-46715860 MsG0380013854.01.T01:intron 40.0%
TACAAATTGCTTACTCCCTC+CGG - Chr3:46713634-46713653 MsG0380013854.01.T01:intron 40.0%
TAGCAAATGCCAAAGGGATT+AGG + Chr3:46718831-46718850 None:intergenic 40.0%
TATTGTGTTCGTTGGGAGAA+GGG - Chr3:46718422-46718441 MsG0380013854.01.T01:CDS 40.0%
TCTTCTCCTGATTGAGATTC+GGG + Chr3:46713149-46713168 None:intergenic 40.0%
TGAAGCTATGTTCATCGAGT+GGG - Chr3:46719082-46719101 MsG0380013854.01.T01:intron 40.0%
TGACTGTTAACAGGCATCAT+TGG - Chr3:46720672-46720691 MsG0380013854.01.T01:intron 40.0%
TGATAGCAGGATAATGACCA+AGG + Chr3:46715221-46715240 None:intergenic 40.0%
TGATCCACGCATAACAAGAT+TGG + Chr3:46720801-46720820 None:intergenic 40.0%
TGCTTATAAATGTGACCGGA+GGG - Chr3:46713769-46713788 MsG0380013854.01.T01:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG + Chr3:46713788-46713769 None:intergenic 40.0%
TGGAGATGAGGATGTTGTAT+TGG - Chr3:46716978-46716997 MsG0380013854.01.T01:intron 40.0%
TGGCAATAGCAAATGCCAAA+GGG + Chr3:46718837-46718856 None:intergenic 40.0%
TGGCAATATTTGCTCACTTC+TGG - Chr3:46718113-46718132 MsG0380013854.01.T01:intron 40.0%
TTAGGTAGTGTTTGGTTGGA+CGG + Chr3:46718801-46718820 None:intergenic 40.0%
TTATGCTCTGTAGGACAGTT+CGG - Chr3:46714982-46715001 MsG0380013854.01.T01:intron 40.0%
TTATTGTGTTCGTTGGGAGA+AGG - Chr3:46718421-46718440 MsG0380013854.01.T01:CDS 40.0%
TTCAGATATTTAGGTGTGCC+GGG - Chr3:46715415-46715434 MsG0380013854.01.T01:intron 40.0%
TTCAGTAAGAGTGAGGACTA+AGG + Chr3:46721048-46721067 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - Chr3:46713768-46713787 MsG0380013854.01.T01:intron 40.0%
TTGCTTATAAATGTGACCGG+AGG + Chr3:46713787-46713768 None:intergenic 40.0%
TTTACAGTTTGCCGTATGCA+TGG - Chr3:46717370-46717389 MsG0380013854.01.T01:intron 40.0%
! AACAAACCAGTTCTTTTGGG+CGG + Chr3:46720160-46720179 None:intergenic 40.0%
! CAGGTAGGAGTGATTACTTT+TGG + Chr3:46720994-46721013 None:intergenic 40.0%
! CTGAAGTACTTCAAGAAGAG+AGG - Chr3:46719727-46719746 MsG0380013854.01.T01:CDS 40.0%
! CTTATTGCATGCACACGTTT+TGG + Chr3:46715294-46715313 None:intergenic 40.0%
! GATGAAGAAGATGGTAATGC+TGG - Chr3:46714711-46714730 MsG0380013854.01.T01:intron 40.0%
! GGGTTGTGATTGTTCTGAAT+CGG + Chr3:46713129-46713148 None:intergenic 40.0%
! GTTTTCTTCTTCGAAACTCG+CGG + Chr3:46713218-46713237 None:intergenic 40.0%
! TAGAAAGAAGCGCAGAAAGT+TGG - Chr3:46720924-46720943 MsG0380013854.01.T01:intron 40.0%
! TCTGAAACATGTAAGCACAG+TGG + Chr3:46714396-46714415 None:intergenic 40.0%
! TGATGAAGCAGATCGTCTTT+TGG - Chr3:46716451-46716470 MsG0380013854.01.T01:CDS 40.0%
! TTCCAACATTCTTTTCGCAG+TGG - Chr3:46719216-46719235 MsG0380013854.01.T01:intron 40.0%
! TTGACTGGTCGTGATATATG+TGG - Chr3:46715072-46715091 MsG0380013854.01.T01:intron 40.0%
! TTGTGGGATTGGGTTTGTTT+AGG - Chr3:46714665-46714684 MsG0380013854.01.T01:intron 40.0%
! TTTCCCAATCTTGTTATGCG+TGG - Chr3:46720794-46720813 MsG0380013854.01.T01:intron 40.0%
! TTTTTCATCCTAGGAGCAAG+AGG - Chr3:46716319-46716338 MsG0380013854.01.T01:intron 40.0%
!! ATATGTGGAAGTGCCATTAC+TGG - Chr3:46715087-46715106 MsG0380013854.01.T01:intron 40.0%
!! GAACTGGTTTGTTACAGAGA+AGG - Chr3:46720167-46720186 MsG0380013854.01.T01:intron 40.0%
!!! CAACATGGTCTGCCTTTTTT+TGG + Chr3:46716637-46716656 None:intergenic 40.0%
!!! GGCATTTGCTATTGCCATTT+TGG - Chr3:46718840-46718859 MsG0380013854.01.T01:intron 40.0%
!!! GTTCTTTTTTTCTAGGGGAG+GGG + Chr3:46718620-46718639 None:intergenic 40.0%
!!! TTTTCTGGTTGCAACTGATG+TGG - Chr3:46718180-46718199 MsG0380013854.01.T01:intron 40.0%
AATCCAGAGTTCCAGACCAT+AGG + Chr3:46719382-46719401 None:intergenic 45.0%
ACTCCAGAACCTCTCTGTTT+CGG + Chr3:46721315-46721334 None:intergenic 45.0%
ACTTCAGGGACTGACATCAT+AGG - Chr3:46718890-46718909 MsG0380013854.01.T01:intron 45.0%
AGAACCCCTCCAATATTGGA+GGG + Chr3:46718561-46718580 None:intergenic 45.0%
AGAATCTAATGCCCTCTTGG+TGG + Chr3:46721172-46721191 None:intergenic 45.0%
AGAGTTCCAGACCATAGGAA+AGG + Chr3:46719377-46719396 None:intergenic 45.0%
AGCCACTGCGAAAAGAATGT+TGG + Chr3:46719221-46719240 None:intergenic 45.0%
AGTTCGATTTCTTCGTCGCT+GGG + Chr3:46713083-46713102 None:intergenic 45.0%
ATCAAGGCCAGACATTGTTG+TGG - Chr3:46716352-46716371 MsG0380013854.01.T01:intron 45.0%
ATCATCCAAATCCACCGACA+TGG + Chr3:46716414-46716433 None:intergenic 45.0%
ATCATGCATGTGAAGAAGGC+TGG - Chr3:46720515-46720534 MsG0380013854.01.T01:intron 45.0%
ATTGATTAGGCAAAGAGGGC+TGG - Chr3:46719622-46719641 MsG0380013854.01.T01:CDS 45.0%
ATTTGTCTCGCCCTTTACTC+CGG - Chr3:46714802-46714821 MsG0380013854.01.T01:intron 45.0%
CAGAAAGTTGGAAGCAGCTA+GGG - Chr3:46720936-46720955 MsG0380013854.01.T01:intron 45.0%
CAGACTCAGAATCAGAACAG+CGG - Chr3:46713183-46713202 MsG0380013854.01.T01:CDS 45.0%
CATGGTTGCGGAAAACAACA+TGG + Chr3:46716652-46716671 None:intergenic 45.0%
CCAACTCTCTCTCTCTCTAA+TGG + Chr3:46717044-46717063 None:intergenic 45.0%
CCATTAGAGAGAGAGAGAGT+TGG - Chr3:46717041-46717060 MsG0380013854.01.T01:intron 45.0%
CCGACATGGAATTGCGTAAA+TGG + Chr3:46716400-46716419 None:intergenic 45.0%
CCTAAGGAAAGCTGAAATGG+AGG - Chr3:46719846-46719865 MsG0380013854.01.T01:intron 45.0%
CCTCCATTTCAGCTTTCCTT+AGG + Chr3:46719849-46719868 None:intergenic 45.0%
CGACTTGCGTGCTTATTTGA+TGG - Chr3:46720873-46720892 MsG0380013854.01.T01:intron 45.0%
CGAGAATCAAGTAAGCGTAG+TGG - Chr3:46716958-46716977 MsG0380013854.01.T01:intron 45.0%
CGCGAAAGACTTCTTCTTCA+AGG - Chr3:46721241-46721260 MsG0380013854.01.T01:CDS 45.0%
CGCTTACTTGATTCTCGTGT+TGG + Chr3:46716955-46716974 None:intergenic 45.0%
CTGAAGCTATGTTCATCGAG+TGG - Chr3:46719081-46719100 MsG0380013854.01.T01:intron 45.0%
CTGATTCTGAGTCTGAGTCT+GGG + Chr3:46713178-46713197 None:intergenic 45.0%
CTGCTGATCCATTGGCAAAA+CGG - Chr3:46716727-46716746 MsG0380013854.01.T01:intron 45.0%
CTTCAAGGACAGAAGAGATG+CGG - Chr3:46721256-46721275 MsG0380013854.01.T01:CDS 45.0%
CTTCGTACTACAGCATCTAC+AGG + Chr3:46717128-46717147 None:intergenic 45.0%
GAAGAAGAAGTCTTTCGCGA+GGG + Chr3:46721240-46721259 None:intergenic 45.0%
GAATTGTCTCCAAGGAATGG+AGG + Chr3:46718657-46718676 None:intergenic 45.0%
GACTAAGACCTTGAATGGAC+TGG + Chr3:46720367-46720386 None:intergenic 45.0%
GATTTCGGCAAAAGCAGCAA+AGG - Chr3:46720197-46720216 MsG0380013854.01.T01:intron 45.0%
GCAATCTTTAGCAGTCAACG+TGG - Chr3:46720556-46720575 MsG0380013854.01.T01:intron 45.0%
GCCACTAAAACACAGAAGCA+CGG + Chr3:46715166-46715185 None:intergenic 45.0%
GCTATTCCAGACTGACATGA+AGG - Chr3:46721281-46721300 MsG0380013854.01.T01:CDS 45.0%
GCTTATGGGCCTGTTTGTAT+TGG + Chr3:46713886-46713905 None:intergenic 45.0%
GCTTCTAAGTATGCCCTGTT+TGG - Chr3:46714089-46714108 MsG0380013854.01.T01:intron 45.0%
GGATCAATTGTGTGTCTGTC+TGG - Chr3:46720341-46720360 MsG0380013854.01.T01:intron 45.0%
GGATGAGTGGTAAGACTAGA+CGG - Chr3:46716999-46717018 MsG0380013854.01.T01:intron 45.0%
GGATTCATCGGAATCGTGTT+CGG + Chr3:46713108-46713127 None:intergenic 45.0%
GTATACCTGGTAAGATCACG+TGG + Chr3:46718944-46718963 None:intergenic 45.0%
GTGGTCTGTCAACAAAGGTT+AGG - Chr3:46716035-46716054 MsG0380013854.01.T01:intron 45.0%
TACCTTTCCCGATCCAGTAA+TGG + Chr3:46715103-46715122 None:intergenic 45.0%
TAGAACCCCTCCAATATTGG+AGG + Chr3:46718562-46718581 None:intergenic 45.0%
TAGGTAGTGTTTGGTTGGAC+GGG + Chr3:46718800-46718819 None:intergenic 45.0%
TCACAACCCGAATCTCAATC+AGG - Chr3:46713140-46713159 MsG0380013854.01.T01:CDS 45.0%
TCACGACCAGTCAATGCTAA+TGG + Chr3:46715066-46715085 None:intergenic 45.0%
TCCAGAATCTAATGCCCTCT+TGG + Chr3:46721175-46721194 None:intergenic 45.0%
TCGGTACGCAAGATCAACAA+GGG + Chr3:46721130-46721149 None:intergenic 45.0%
TCTGATTCTGAGTCTGAGTC+TGG + Chr3:46713179-46713198 None:intergenic 45.0%
TCTTACTCCAACCAGAGAGT+TGG - Chr3:46715323-46715342 MsG0380013854.01.T01:CDS 45.0%
TCTTCTCTCCCCTCCAATAT+TGG - Chr3:46718549-46718568 MsG0380013854.01.T01:intron 45.0%
TGAAGAAGAAGTCTTTCGCG+AGG + Chr3:46721241-46721260 None:intergenic 45.0%
TGCTCACCACATAGATAGCA+GGG + Chr3:46716249-46716268 None:intergenic 45.0%
TTCAAGGACAGAAGAGATGC+GGG - Chr3:46721257-46721276 MsG0380013854.01.T01:CDS 45.0%
TTCGCGTGTGTCCCAAAAAA+AGG - Chr3:46716622-46716641 MsG0380013854.01.T01:intron 45.0%
TTGAAAGCTGCTGAGCTTCA+TGG - Chr3:46717942-46717961 MsG0380013854.01.T01:CDS 45.0%
TTGCCAATGGATCAGCAGAA+AGG + Chr3:46716725-46716744 None:intergenic 45.0%
TTGCTCACCACATAGATAGC+AGG + Chr3:46716250-46716269 None:intergenic 45.0%
TTTACGCAATTCCATGTCGG+TGG - Chr3:46716400-46716419 MsG0380013854.01.T01:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr3:46717308-46717327 None:intergenic 45.0%
! AAGTAAGCGTAGTGGAGATG+AGG - Chr3:46716966-46716985 MsG0380013854.01.T01:intron 45.0%
! ACAAACCAGTTCTTTTGGGC+GGG + Chr3:46720159-46720178 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr3:46717309-46717328 None:intergenic 45.0%
! CAATTCCATGTCGGTGGATT+TGG - Chr3:46716406-46716425 MsG0380013854.01.T01:intron 45.0%
! GAAGGAATCAGCACTGAAAG+AGG + Chr3:46714772-46714791 None:intergenic 45.0%
! GGAGAAGGGAGGGATTTTAA+TGG - Chr3:46718436-46718455 MsG0380013854.01.T01:CDS 45.0%
! GTGGTAAGACTAGACGGATT+AGG - Chr3:46717005-46717024 MsG0380013854.01.T01:intron 45.0%
! TTTCCTATGGTCTGGAACTC+TGG - Chr3:46719376-46719395 MsG0380013854.01.T01:intron 45.0%
! TTTGAGGTCTTCAGCTTGCT+GGG + Chr3:46720734-46720753 None:intergenic 45.0%
!! AAACAGAGAGGTTCTGGAGT+AGG - Chr3:46721315-46721334 MsG0380013854.01.T01:CDS 45.0%
!! AAGAGGCTGCTTTGAGATCA+AGG - Chr3:46716336-46716355 MsG0380013854.01.T01:intron 45.0%
!! ACCAAGAGGGCATTAGATTC+TGG - Chr3:46721171-46721190 MsG0380013854.01.T01:CDS 45.0%
!! ACCGTGCTTCTGTGTTTTAG+TGG - Chr3:46715162-46715181 MsG0380013854.01.T01:intron 45.0%
!! AGGTTCTGGAGTAGGAAAGA+AGG - Chr3:46721323-46721342 MsG0380013854.01.T01:CDS 45.0%
!! CCTTTACTGCTTTTGCACGT+CGG + Chr3:46721149-46721168 None:intergenic 45.0%
!! GAAGCAGCAAGTGGATTTTC+TGG - Chr3:46718165-46718184 MsG0380013854.01.T01:intron 45.0%
!! GAAGGGAGGGATTTTAATGG+AGG - Chr3:46718439-46718458 MsG0380013854.01.T01:CDS 45.0%
!! GAGTATTGAGTGAAGTCCCA+TGG + Chr3:46713248-46713267 None:intergenic 45.0%
!! TGGAAGTGCCATTACTGGAT+CGG - Chr3:46715092-46715111 MsG0380013854.01.T01:intron 45.0%
!! TTGCATGCACACGTTTTGGA+CGG + Chr3:46715290-46715309 None:intergenic 45.0%
!!! TTTTGAGGTCTTCAGCTTGC+TGG + Chr3:46720735-46720754 None:intergenic 45.0%
!!! TTTTTTCTAGGGGAGGGGAT+GGG + Chr3:46718615-46718634 None:intergenic 45.0%
!!! TTTTTTTCTAGGGGAGGGGA+TGG + Chr3:46718616-46718635 None:intergenic 45.0%
AAGCAGTAAAGGCCACCAAG+AGG - Chr3:46721157-46721176 MsG0380013854.01.T01:CDS 50.0%
AAGCCGAAACAGAGAGGTTC+TGG - Chr3:46721309-46721328 MsG0380013854.01.T01:CDS 50.0%
AGATATTTAGGTGTGCCGGG+AGG - Chr3:46715418-46715437 MsG0380013854.01.T01:intron 50.0%
AGCAGTAAAGGCCACCAAGA+GGG - Chr3:46721158-46721177 MsG0380013854.01.T01:CDS 50.0%
AGCTGAAATGGAGGCCACAA+AGG - Chr3:46719855-46719874 MsG0380013854.01.T01:intron 50.0%
ATCATCAACCTCCTCGGTCA+TGG + Chr3:46716670-46716689 None:intergenic 50.0%
CAACTCCCCTGCTATCTATG+TGG - Chr3:46716240-46716259 MsG0380013854.01.T01:CDS 50.0%
CACATAGATAGCAGGGGAGT+TGG + Chr3:46716242-46716261 None:intergenic 50.0%
CATGTCCACGTGATCTTACC+AGG - Chr3:46718936-46718955 MsG0380013854.01.T01:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr3:46717307-46717326 MsG0380013854.01.T01:intron 50.0%
CCGACGTGCAAAAGCAGTAA+AGG - Chr3:46721146-46721165 MsG0380013854.01.T01:CDS 50.0%
CTCTCCCCTCCAATATTGGA+GGG - Chr3:46718553-46718572 MsG0380013854.01.T01:intron 50.0%
CTGAAAGAGGTTCCAGCAGA+AGG + Chr3:46714759-46714778 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + Chr3:46717304-46717323 None:intergenic 50.0%
GAACCCCTCCAATATTGGAG+GGG + Chr3:46718560-46718579 None:intergenic 50.0%
GACATTGTTGTGGCTACTCC+AGG - Chr3:46716362-46716381 MsG0380013854.01.T01:intron 50.0%
GAGGAGAGTCGGATCAAAAG+AGG - Chr3:46717161-46717180 MsG0380013854.01.T01:intron 50.0%
GAGTTCGATTTCTTCGTCGC+TGG + Chr3:46713084-46713103 None:intergenic 50.0%
GATATTTAGGTGTGCCGGGA+GGG - Chr3:46715419-46715438 MsG0380013854.01.T01:intron 50.0%
GCAGAAAGTTGGAAGCAGCT+AGG - Chr3:46720935-46720954 MsG0380013854.01.T01:intron 50.0%
GCTCACCACATAGATAGCAG+GGG + Chr3:46716248-46716267 None:intergenic 50.0%
GGAGGGTCGAAGATGAAACT+AGG + Chr3:46713062-46713081 None:intergenic 50.0%
GGAGTAGCCACAACAATGTC+TGG + Chr3:46716362-46716381 None:intergenic 50.0%
GTCGGTACGCAAGATCAACA+AGG + Chr3:46721131-46721150 None:intergenic 50.0%
TAGTGTTTGGTTGGACGGGA+GGG + Chr3:46718796-46718815 None:intergenic 50.0%
TCCAGCAGAAGGAGCAAAGA+AGG + Chr3:46714748-46714767 None:intergenic 50.0%
TCCTTCTTTGCTCCTTCTGC+TGG - Chr3:46714744-46714763 MsG0380013854.01.T01:intron 50.0%
TCTCCCCTCCAATATTGGAG+GGG - Chr3:46718554-46718573 MsG0380013854.01.T01:intron 50.0%
TCTCTCCCCTCCAATATTGG+AGG - Chr3:46718552-46718571 MsG0380013854.01.T01:intron 50.0%
TGCCATTACTGGATCGGGAA+AGG - Chr3:46715098-46715117 MsG0380013854.01.T01:intron 50.0%
TGTCGGTGGTCTGTCAACAA+AGG - Chr3:46716030-46716049 MsG0380013854.01.T01:intron 50.0%
TTGACAGACCACCGACAATC+AGG + Chr3:46716027-46716046 None:intergenic 50.0%
TTTCTCCCGCCCAAAAGAAC+TGG - Chr3:46720151-46720170 MsG0380013854.01.T01:intron 50.0%
TTTGTCTCGCCCTTTACTCC+GGG - Chr3:46714803-46714822 MsG0380013854.01.T01:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr3:46717310-46717329 None:intergenic 50.0%
!! GGAAGTGCCATTACTGGATC+GGG - Chr3:46715093-46715112 MsG0380013854.01.T01:intron 50.0%
!!! GCAGATCGTCTTTTGGAGCT+AGG - Chr3:46716458-46716477 MsG0380013854.01.T01:CDS 50.0%
AACCTCCTCGGTCATGGTTG+CGG + Chr3:46716664-46716683 None:intergenic 55.0%
AAGGCGCAGGGGTTTGGATA+GGG + Chr3:46716706-46716725 None:intergenic 55.0%
ACGTGTTGCCTGATTGTCGG+TGG - Chr3:46716016-46716035 MsG0380013854.01.T01:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + Chr3:46717296-46717315 None:intergenic 55.0%
AGCAGCTAGGGAGATGTTGG+AGG - Chr3:46720948-46720967 MsG0380013854.01.T01:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG - Chr3:46717295-46717314 MsG0380013854.01.T01:intron 55.0%
CAAAGCAGCCTCTTGCTCCT+AGG + Chr3:46716330-46716349 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG - Chr3:46717302-46717321 MsG0380013854.01.T01:intron 55.0%
CGATTTCTTCGTCGCTGGGA+GGG + Chr3:46713079-46713098 None:intergenic 55.0%
CTGTCAGGCAAAGCAACGAC+CGG + Chr3:46713353-46713372 None:intergenic 55.0%
CTGTCTGGCCAGTCCATTCA+AGG - Chr3:46720356-46720375 MsG0380013854.01.T01:intron 55.0%
CTTACTCAGGCCCAACGTCT+AGG - Chr3:46717969-46717988 MsG0380013854.01.T01:CDS 55.0%
GCAGCTGTCTGCATGATAGC+AGG + Chr3:46715234-46715253 None:intergenic 55.0%
GCGCCTTTCTGCTGATCCAT+TGG - Chr3:46716719-46716738 MsG0380013854.01.T01:intron 55.0%
GCTTTGCCTGACAGCGATGA+CGG - Chr3:46713359-46713378 MsG0380013854.01.T01:intron 55.0%
GGAAGCAGCTAGGGAGATGT+TGG - Chr3:46720945-46720964 MsG0380013854.01.T01:intron 55.0%
GTAGTGTTTGGTTGGACGGG+AGG + Chr3:46718797-46718816 None:intergenic 55.0%
GTGTTCGTTGGGAGAAGGGA+GGG - Chr3:46718426-46718445 MsG0380013854.01.T01:CDS 55.0%
TACAGCAAGAGCCGGAAGAG+CGG - Chr3:46719108-46719127 MsG0380013854.01.T01:CDS 55.0%
TACTCCTCGGTCAAGGATGC+TGG + Chr3:46716753-46716772 None:intergenic 55.0%
TCGATTTCTTCGTCGCTGGG+AGG + Chr3:46713080-46713099 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - Chr3:46717296-46717315 MsG0380013854.01.T01:intron 55.0%
TGTCAGACAACGCTCAGCTC+CGG - Chr3:46713331-46713350 MsG0380013854.01.T01:CDS 55.0%
TGTGTTCGTTGGGAGAAGGG+AGG - Chr3:46718425-46718444 MsG0380013854.01.T01:CDS 55.0%
TTACTGGGCTGCCAACTCTC+TGG + Chr3:46715337-46715356 None:intergenic 55.0%
! AAAGGCGCAGGGGTTTGGAT+AGG + Chr3:46716707-46716726 None:intergenic 55.0%
! ATGGATCAGCAGAAAGGCGC+AGG + Chr3:46716719-46716738 None:intergenic 55.0%
! CTATATGCCACTTGCCCTCC+CGG + Chr3:46715436-46715455 None:intergenic 55.0%
! GTTTTCCGCAACCATGACCG+AGG - Chr3:46716656-46716675 MsG0380013854.01.T01:intron 55.0%
! TGGATCAGCAGAAAGGCGCA+GGG + Chr3:46716718-46716737 None:intergenic 55.0%
!! GATGCTGGCCGTTTTGCCAA+TGG + Chr3:46716738-46716757 None:intergenic 55.0%
ACAGCAAGAGCCGGAAGAGC+GGG - Chr3:46719109-46719128 MsG0380013854.01.T01:CDS 60.0%
ACCTCGCAAGCCCGGAGTAA+AGG + Chr3:46714816-46714835 None:intergenic 60.0%
CCTCGCAAGCCCGGAGTAAA+GGG + Chr3:46714815-46714834 None:intergenic 60.0%
CTACTGCCGTCATCGCTGTC+AGG + Chr3:46713368-46713387 None:intergenic 60.0%
GTGGGTCGTACAGCAAGAGC+CGG - Chr3:46719100-46719119 MsG0380013854.01.T01:CDS 60.0%
TGGGCTGCCAACTCTCTGGT+TGG + Chr3:46715333-46715352 None:intergenic 60.0%
TTCCGCAACCATGACCGAGG+AGG - Chr3:46716659-46716678 MsG0380013854.01.T01:intron 60.0%
! AAAGAGGAAGCGCGAGCGAG+AGG - Chr3:46720762-46720781 MsG0380013854.01.T01:intron 60.0%
! AGCAGAAAGGCGCAGGGGTT+TGG + Chr3:46716712-46716731 None:intergenic 60.0%
! GGATCAGCAGAAAGGCGCAG+GGG + Chr3:46716717-46716736 None:intergenic 60.0%
ACCCCAAGACCTCGCAAGCC+CGG + Chr3:46714824-46714843 None:intergenic 65.0%
ACGGCCAGCATCCTTGACCG+AGG - Chr3:46716746-46716765 MsG0380013854.01.T01:intron 65.0%
ACTCCGGGCTTGCGAGGTCT+TGG - Chr3:46714818-46714837 MsG0380013854.01.T01:intron 65.0%
CAGCAAGAGCCGGAAGAGCG+GGG - Chr3:46719110-46719129 MsG0380013854.01.T01:CDS 65.0%
CCCTTTACTCCGGGCTTGCG+AGG - Chr3:46714812-46714831 MsG0380013854.01.T01:intron 65.0%
CTCCGGGCTTGCGAGGTCTT+GGG - Chr3:46714819-46714838 MsG0380013854.01.T01:intron 65.0%
GACTGCAGACCCCGCTCTTC+CGG + Chr3:46719122-46719141 None:intergenic 65.0%
TCCGGGCTTGCGAGGTCTTG+GGG - Chr3:46714820-46714839 MsG0380013854.01.T01:intron 65.0%
AGGTGTGCCGGGAGGGCAAG+TGG - Chr3:46715426-46715445 MsG0380013854.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 46713024 46721419 46713024 ID=MsG0380013854.01;Name=MsG0380013854.01
Chr3 mRNA 46713024 46721419 46713024 ID=MsG0380013854.01.T01;Parent=MsG0380013854.01;Name=MsG0380013854.01.T01;_AED=0.39;_eAED=0.39;_QI=29|0.76|0.85|1|1|1|14|0|657
Chr3 exon 46713024 46713353 46713024 ID=MsG0380013854.01.T01:exon:25886;Parent=MsG0380013854.01.T01
Chr3 exon 46713447 46713530 46713447 ID=MsG0380013854.01.T01:exon:25885;Parent=MsG0380013854.01.T01
Chr3 exon 46713660 46713758 46713660 ID=MsG0380013854.01.T01:exon:25884;Parent=MsG0380013854.01.T01
Chr3 exon 46715260 46715356 46715260 ID=MsG0380013854.01.T01:exon:25883;Parent=MsG0380013854.01.T01
Chr3 exon 46715486 46715565 46715486 ID=MsG0380013854.01.T01:exon:25882;Parent=MsG0380013854.01.T01
Chr3 exon 46716233 46716295 46716233 ID=MsG0380013854.01.T01:exon:25881;Parent=MsG0380013854.01.T01
Chr3 exon 46716451 46716553 46716451 ID=MsG0380013854.01.T01:exon:25880;Parent=MsG0380013854.01.T01
Chr3 exon 46717674 46717822 46717674 ID=MsG0380013854.01.T01:exon:25879;Parent=MsG0380013854.01.T01
Chr3 exon 46717938 46718111 46717938 ID=MsG0380013854.01.T01:exon:25878;Parent=MsG0380013854.01.T01
Chr3 exon 46718392 46718470 46718392 ID=MsG0380013854.01.T01:exon:25877;Parent=MsG0380013854.01.T01
Chr3 exon 46719091 46719197 46719091 ID=MsG0380013854.01.T01:exon:25876;Parent=MsG0380013854.01.T01
Chr3 exon 46719324 46719392 46719324 ID=MsG0380013854.01.T01:exon:25875;Parent=MsG0380013854.01.T01
Chr3 exon 46719577 46719756 46719577 ID=MsG0380013854.01.T01:exon:25874;Parent=MsG0380013854.01.T01
Chr3 exon 46721031 46721419 46721031 ID=MsG0380013854.01.T01:exon:25873;Parent=MsG0380013854.01.T01
Chr3 five_prime_UTR 46721391 46721419 46721391 ID=MsG0380013854.01.T01:five_prime_utr;Parent=MsG0380013854.01.T01
Chr3 CDS 46721031 46721390 46721031 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Chr3 CDS 46719577 46719756 46719577 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Chr3 CDS 46719324 46719392 46719324 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Chr3 CDS 46719091 46719197 46719091 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Chr3 CDS 46718392 46718470 46718392 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Chr3 CDS 46717938 46718111 46717938 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Chr3 CDS 46717674 46717822 46717674 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Chr3 CDS 46716451 46716553 46716451 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Chr3 CDS 46716233 46716295 46716233 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Chr3 CDS 46715486 46715565 46715486 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Chr3 CDS 46715260 46715356 46715260 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Chr3 CDS 46713660 46713758 46713660 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Chr3 CDS 46713447 46713530 46713447 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Chr3 CDS 46713024 46713353 46713024 ID=MsG0380013854.01.T01:cds;Parent=MsG0380013854.01.T01
Gene Sequence

>MsG0380013854.01.T01

ATGTCACCTAGTTTCATCTTCGACCCTCCCAGCGACGAAGAAATCGAACTCTCCGAACACGATTCCGATGAATCCGATTCAGAACAATCACAACCCGAATCTCAATCAGGAGAAGACTCAGACCCAGACTCAGACTCAGAATCAGAACAGCGGCGCAAAGAACCGCGAGTTTCGAAGAAGAAAACACAGTCTCCATGGGACTTCACTCAATACTCTGAATCAGTTGCTGAAGAACACGCTCGCAGAAGTACAACATCAGTAGACGATAAAATCTCAGCTGTCAGACAACGCTCAGCTCCGGTCGTTGCTTTGCCTGACAGCGATGACGGCAGTAGTTCCGACTCTGAAGCTGATAAACAAGAAGAATATAGACCAGAAGAAGAAGATGAAGAAGATGGTAATGCTGGTGAAAACAAGTCCTTCTTTGCTCCTTCTGCTGGAACCTCTTTCAGTGCTGATTCCTTCTTGCAACTCAATTTGTCTCGCCCTTTACTCCGGGCTTGCGAGGTCTTGGGGTATTCTAAACCAACACCAATTCAGGCGGCTTGTATACCATTAGCATTGACTGGTCGTGATATATGTGGAAGTGCCATTACTGGATCGGGAAAGACAGCTGCATTTGCACTACCTACTTTAGAGAGATTGCTGTTCCGTCCAAAACGTGTGCATGCAATAAGGGTCCTTATTCTTACTCCAACCAGAGAGTTGGCAGCCCAAGTTCAAAGTATGATTAAGAGCCTTGCTCACTTTACTGATATAACGTGTTGCCTGATTGTCGGTGGTCTGTCAACAAAGGAGCAAGAGGCTGCTTTGAGATCAAGGCCAGACATTGTTGTGGCTACTCCAGGACGTATGATAGACCATTTACGCAATTCCATGTCGGTGGATTTGGATGATCTTTCTGTTTTAATCCTTGATGAAGCAGATCGTCTTTTGGAGCTAGGATTTAGTGCTGAAATTCAGGAACTTGTTCGCGTGTGTCCCAAAAAAAGGCAGACCATGTTGTTTTCCGCAACCATGACCGAGGAGGTTGATGATCTTATTAAACTTTCCCTATCCAAACCCCTGCGCCTTTCTGCTGATCCATTGGCAAAACGGCCAGCATCCTTGACCGAGGATGGAACGAAGCAAGCTGCACATAGATTGAAGATTATATTTGGATTAGCTGGATTGAAAGCTGCTGAGCTTCATGGAAATCTTACTCAGGCCCAACGTCTAGGAGCTTTGGAACAATTTAGGAAGCAGCAAGTGGATTTTCTGGTTGCAACTGATGTGGCTGCTCGTTCACTTAATTTTACTTCAGGGACTGACATCATAGGTGTTCAAACAGTTATCAATTTTGCATGTCCACGTGATCTTACCAGCTATGTTCATCGAGTGGGTCGTACAGCAAGAGCCGGAAGAGCGGGGTCTGCAGTCACATTTGTTACTGATAATGACCGGTCACTTCTAAAAGCTATTGCATCATTGGATAAAGAAGATGGTTCTTCTCATAAGATGGTTAGTGCCCAGCAAGCTGAAGACCTCAAAATGAAGGAAAAGAGGAAGCGCGAGCGAGAGAAAAATTTGCCTAGAAAGAAGCGCAGAAAGTTGGAAGCAGCTAGGGAGATGTTGGAGGATGACGAGCATGATGACAAGCCAAAAGACAAGGGGACAGATAAGAATGAAAAGGCTGGTCTGACCCTTGTTGATCTTGCGTACCGACGTGCAAAAGCAGTAAAGGCCACCAAGAGGGCATTAGATTCTGGAAAGATTATTAAGAAGCCTCAAAAGAAATCTAATAAATCTAATCCCTCGCGAAAGACTTCTTCTTCAAGGACAGAAGAGATGCGGGAGCTATTCCAGACTGACATGAAGGATAAAAAGCCGAAACAGAGAGGTTCTGGAGTAGGAAAGAAGGCTCAAAAATCATTCAAAAGCAAGTCAAGGTATCAAATTAAAAAAACCTCTCTCATTTCCAAAACTATTATCTGA
Protein sequence

>MsG0380013854.01.T01

MSPSFIFDPPSDEEIELSEHDSDESDSEQSQPESQSGEDSDPDSDSESEQRRKEPRVSKKKTQSPWDFTQYSESVAEEHARRSTTSVDDKISAVRQRSAPVVALPDSDDGSSSDSEADKQEEYRPEEEDEEDGNAGENKSFFAPSAGTSFSADSFLQLNLSRPLLRACEVLGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKRVHAIRVLILTPTRELAAQVQSMIKSLAHFTDITCCLIVGGLSTKEQEAALRSRPDIVVATPGRMIDHLRNSMSVDLDDLSVLILDEADRLLELGFSAEIQELVRVCPKKRQTMLFSATMTEEVDDLIKLSLSKPLRLSADPLAKRPASLTEDGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLGALEQFRKQQVDFLVATDVAARSLNFTSGTDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVTDNDRSLLKAIASLDKEDGSSHKMVSAQQAEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEDDEHDDKPKDKGTDKNEKAGLTLVDLAYRRAKAVKATKRALDSGKIIKKPQKKSNKSNPSRKTSSSRTEEMRELFQTDMKDKKPKQRGSGVGKKAQKSFKSKSRYQIKKTSLISKTII*