AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014182.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014182.01.T01 MTR_3g052530 62.804 699 78 11 33 574 124 797 0.0 773
MsG0380014182.01.T01 MTR_3g052530 62.767 701 78 12 33 574 124 800 0.0 770
MsG0380014182.01.T01 MTR_3g052530 64.030 670 88 13 33 574 124 768 0.0 751
MsG0380014182.01.T01 MTR_3g052530 69.361 532 32 5 173 574 308 838 0.0 684
MsG0380014182.01.T01 MTR_3g052530 51.587 126 37 3 33 158 124 225 8.62e-25 109
MsG0380014182.01.T01 MTR_3g052530 69.361 532 32 5 173 574 311 841 0.0 683
MsG0380014182.01.T01 MTR_3g052530 51.562 128 37 4 33 158 124 228 4.23e-24 107
MsG0380014182.01.T01 MTR_3g052530 71.372 503 42 7 173 574 308 809 0.0 661
MsG0380014182.01.T01 MTR_3g052530 51.587 126 37 3 33 158 124 225 8.87e-25 109
MsG0380014182.01.T01 MTR_5g093070 46.349 315 105 5 323 574 646 959 1.90e-60 216
MsG0380014182.01.T01 MTR_5g093070 44.828 203 54 4 174 319 369 570 8.06e-41 159
MsG0380014182.01.T01 MTR_5g093070 37.879 132 48 3 57 176 195 304 1.63e-16 84.0
MsG0380014182.01.T01 MTR_3g115560 47.619 63 33 0 190 252 367 429 2.58e-13 73.2
MsG0380014182.01.T01 MTR_3g115560 43.023 86 27 3 58 143 121 184 1.18e-11 68.2
MsG0380014182.01.T01 MTR_3g115560 47.619 63 33 0 190 252 253 315 2.94e-13 72.8
MsG0380014182.01.T01 MTR_3g115560 43.023 86 27 3 58 143 7 70 9.88e-12 68.2
MsG0380014182.01.T01 MTR_3g115560 47.619 63 33 0 190 252 204 266 3.64e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014182.01.T01 AT5G55040 33.198 494 209 20 199 574 426 916 3.84e-42 162
MsG0380014182.01.T01 AT5G55040 50.000 90 23 2 54 143 180 247 7.95e-16 81.6
MsG0380014182.01.T01 AT5G55040 33.198 494 209 20 199 574 426 916 3.84e-42 162
MsG0380014182.01.T01 AT5G55040 50.000 90 23 2 54 143 180 247 7.95e-16 81.6
MsG0380014182.01.T01 AT1G20670 55.172 58 26 0 195 252 418 475 5.34e-15 78.6
MsG0380014182.01.T01 AT1G76380 52.632 57 27 0 196 252 389 445 5.82e-13 72.0
MsG0380014182.01.T01 AT1G76380 52.632 57 27 0 196 252 390 446 5.88e-13 72.0
MsG0380014182.01.T01 AT1G76380 52.632 57 27 0 196 252 389 445 5.92e-13 72.0

Find 197 sgRNAs with CRISPR-Local

Find 416 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCACTTTGTTTCTGTTTC+AGG 0.039746 3:-50999675 MsG0380014182.01.T01:intron
TAATCAAACTAGTTTCTTTC+TGG 0.140927 3:+50996493 None:intergenic
GTTGCCTGATAGGAAGATTT+TGG 0.246879 3:-50999429 MsG0380014182.01.T01:CDS
CTTCCTGCTGACTGTAAATT+TGG 0.247534 3:-50996579 MsG0380014182.01.T01:CDS
AATACTGAACATCCTGTAAA+TGG 0.249836 3:-50996429 MsG0380014182.01.T01:CDS
TCAAGCTTCTGTCCATTTAC+AGG 0.256977 3:+50996417 None:intergenic
TTTATGAATACATACTTAAA+TGG 0.264287 3:-50998798 MsG0380014182.01.T01:CDS
TTCTAATGATGACAGATATA+AGG 0.282430 3:-50999720 MsG0380014182.01.T01:intron
CTAACAACTTCATTTGTATC+TGG 0.292265 3:+50996086 None:intergenic
TTTACAGGATGTTCAGTATT+GGG 0.301371 3:+50996432 None:intergenic
GATTGAGCTGATGGTTTATC+TGG 0.303585 3:+50995846 None:intergenic
CCCAGTCTGGTTGCAAAGTC+TGG 0.312447 3:-50996194 MsG0380014182.01.T01:CDS
GTTCCTAGGCGCACTCTCTT+TGG 0.320092 3:+50996142 None:intergenic
TTCCTAGGCGCACTCTCTTT+GGG 0.326054 3:+50996143 None:intergenic
CATCTCTAGGACCTGTTGTT+TGG 0.330870 3:-50996632 MsG0380014182.01.T01:CDS
AACGGAATCCCGTGCGATAT+TGG 0.338041 3:+50999449 None:intergenic
AAGGAGCTGTTCTGATTGTT+TGG 0.341258 3:+50995982 None:intergenic
TGCTTCAGTGGCAGCTGCTC+AGG 0.348403 3:-50995799 MsG0380014182.01.T01:intron
GCTGCCACTGAAGCATTGCC+TGG 0.349300 3:+50995807 None:intergenic
TGTTTCCCGTGGGCAGGAGC+AGG 0.351759 3:-50995958 MsG0380014182.01.T01:CDS
GAAGAAGAAATTGAAATTGA+TGG 0.352689 3:-51000468 MsG0380014182.01.T01:five_prime_UTR
ACTCCATTAAAACCATTAGA+AGG 0.354182 3:+50996342 None:intergenic
AAAATTCTACACACCTCTTC+CGG 0.357218 3:+50999217 None:intergenic
CGAGCTAGATCCGCCTTTGA+TGG 0.358038 3:+51000629 None:intergenic
AACTAGAAAGAGAATGGGTT+TGG 0.361419 3:+51000725 None:intergenic
ACTTCCAAAATCTTCCTATC+AGG 0.368049 3:+50999425 None:intergenic
TCTGATGACTCAGCACTGTA+TGG 0.368869 3:-50999292 MsG0380014182.01.T01:intron
TACGAAGGAAATCCTTCTAA+TGG 0.370253 3:-50996354 MsG0380014182.01.T01:CDS
ACGGGATTCCGTTGCCTGAT+AGG 0.378059 3:-50999439 MsG0380014182.01.T01:CDS
CTTTGTCCAGATTGAGCTGA+TGG 0.378589 3:+50995837 None:intergenic
ATATTCCTATACTAGGAGTT+TGG 0.394281 3:-50996667 MsG0380014182.01.T01:CDS
ATCGGATTCCGTTGCGGCGG+CGG 0.395835 3:+51000587 None:intergenic
GGAAGAACGAGAGGAAGAAT+TGG 0.402005 3:-51000432 MsG0380014182.01.T01:five_prime_UTR
TCAATCACATCATGATAATC+AGG 0.406455 3:+50999120 None:intergenic
TGATTACCAAGCATAAATAT+CGG 0.414338 3:+50996519 None:intergenic
TTTGGAACATTGCTTCCAAC+AGG 0.429347 3:-50996614 MsG0380014182.01.T01:CDS
ACTGTATGGGTTTGAATGAT+TGG 0.430290 3:-50999278 MsG0380014182.01.T01:CDS
GGGGATACCATAGGTTGGTT+GGG 0.431230 3:+50995543 None:intergenic
GGGTACAAAGTTGATTCAAA+AGG 0.432614 3:-50999699 MsG0380014182.01.T01:CDS
TCTAATGATGACAGATATAA+GGG 0.433072 3:-50999719 MsG0380014182.01.T01:intron
ATAAATATCGGGGTTGGAAT+CGG 0.433278 3:+50996531 None:intergenic
GATAAACCATCAGCTCAATC+TGG 0.434462 3:-50995843 MsG0380014182.01.T01:CDS
TCGGCCCGCGGTTGTGATTG+AGG 0.437764 3:+50995522 None:intergenic
TCCAGACTTTGCAACCAGAC+TGG 0.438473 3:+50996193 None:intergenic
CGGCCCGCGGTTGTGATTGA+GGG 0.441060 3:+50995523 None:intergenic
CCAGACTTTGCAACCAGACT+GGG 0.444444 3:+50996194 None:intergenic
TGCTTCCAACAGGATTCAAC+AGG 0.445957 3:-50996604 MsG0380014182.01.T01:CDS
CTAGAAAACTAGAAAGAGAA+TGG 0.446525 3:+51000719 None:intergenic
TTAAATGGCATGCTACTGAT+AGG 0.448199 3:-50998783 MsG0380014182.01.T01:CDS
TAGAGAGAGAAACATGGTTC+AGG 0.453863 3:-51000675 MsG0380014182.01.T01:five_prime_UTR
GAAGAAGATGAAGAAGAGAT+TGG 0.459460 3:-51000385 MsG0380014182.01.T01:CDS
CATAGTTGCAAAGCTAGGTC+TGG 0.460454 3:+50995355 None:intergenic
CTCGCCGCGTCGCTGATCTC+AGG 0.460896 3:-51000610 MsG0380014182.01.T01:five_prime_UTR
CCTTGCATCGGATAGGAACT+TGG 0.460971 3:+50997141 None:intergenic
ACGGAGACTCCGCCGTGAAT+CGG 0.461862 3:+51000569 None:intergenic
GGCATGCTACTGATAGGAAC+AGG 0.462709 3:-50998777 MsG0380014182.01.T01:CDS
AATATTGATTGTCAATCTCC+AGG 0.464555 3:-50995409 MsG0380014182.01.T01:CDS
ACTGTAAATTTGGTCGTGGA+TGG 0.466190 3:-50996569 MsG0380014182.01.T01:CDS
GATTACCAAGCATAAATATC+GGG 0.469769 3:+50996520 None:intergenic
ATTTACAGGATGTTCAGTAT+TGG 0.469775 3:+50996431 None:intergenic
GAAGCAATGTTCCAAACAAC+AGG 0.470461 3:+50996621 None:intergenic
AAGAGAAGATCACGCGGTAA+TGG 0.472933 3:-51000407 MsG0380014182.01.T01:exon
CATTTCAAATGCAGTCCCCT+TGG 0.473440 3:-50995495 MsG0380014182.01.T01:CDS
ACGAGCCAAACTCCTAGTAT+AGG 0.478129 3:+50996662 None:intergenic
CTGATGACTCAGCACTGTAT+GGG 0.478608 3:-50999291 MsG0380014182.01.T01:intron
CCTCACCGTGGCAAAATCCA+TGG 0.478644 3:+50999092 None:intergenic
AGGGGATACCATAGGTTGGT+TGG 0.479840 3:+50995542 None:intergenic
GGTACAAAGTTGATTCAAAA+GGG 0.486856 3:-50999698 MsG0380014182.01.T01:CDS
CTGCCACTGAAGCATTGCCT+GGG 0.487116 3:+50995808 None:intergenic
ACAGTACCATCAACATTGCC+TGG 0.490042 3:+50997103 None:intergenic
CAGTTTCCCCAACCAACCTA+TGG 0.492144 3:-50995550 MsG0380014182.01.T01:CDS
GTAAATGGACAGAAGCTTGA+GGG 0.495798 3:-50996414 MsG0380014182.01.T01:CDS
TCCTGCCCACGGGAAACAAA+AGG 0.498077 3:+50995963 None:intergenic
TACCCTACATTAGAGCAACT+TGG 0.498089 3:-50999048 MsG0380014182.01.T01:CDS
TGAGGTCTAGGTGAATGAAA+TGG 0.498190 3:+50995598 None:intergenic
GGCTGCTTGAAAGTTGTAGA+TGG 0.499638 3:+50996107 None:intergenic
GTGAGGAAGAAGTTGGCAAA+TGG 0.499708 3:-50999075 MsG0380014182.01.T01:CDS
ATTGACAATCAATATTCGTC+AGG 0.500591 3:+50995416 None:intergenic
CCGCAACGGAATCCGATTCA+CGG 0.501576 3:-51000581 MsG0380014182.01.T01:five_prime_UTR
GTGTGAATAGGTTGAGGTCT+AGG 0.502633 3:+50995586 None:intergenic
CGGAGCCGGTGATCCGGAAG+AGG 0.505216 3:-50999230 MsG0380014182.01.T01:CDS
TAAAGCTGAGATGTTATGTC+AGG 0.505433 3:-50997044 MsG0380014182.01.T01:intron
GTTTCCCGTGGGCAGGAGCA+GGG 0.509742 3:-50995957 MsG0380014182.01.T01:CDS
ATCTCAGGCCGCCGCCGCAA+CGG 0.511666 3:-51000595 MsG0380014182.01.T01:five_prime_UTR
CAGGTCGCTAAGAGGAAGAA+AGG 0.513016 3:-51000656 MsG0380014182.01.T01:five_prime_UTR
AAACAGGGAACCCTTCCGCC+TGG 0.513281 3:-50995439 MsG0380014182.01.T01:CDS
TAATCAAAATAATCCCAGTC+TGG 0.515673 3:-50996207 MsG0380014182.01.T01:CDS
TATTCGTCAGGCCAGGCGGA+AGG 0.515836 3:+50995428 None:intergenic
TACCCAAGTTGCTCTAATGT+AGG 0.518589 3:+50999045 None:intergenic
TTTGTTGTACTCTCAGATGA+TGG 0.518875 3:+50996005 None:intergenic
CCAACCCCGATATTTATGCT+TGG 0.520837 3:-50996525 MsG0380014182.01.T01:CDS
CCAAGCATAAATATCGGGGT+TGG 0.522875 3:+50996525 None:intergenic
GAATCCCGTGCGATATTGGC+TGG 0.523520 3:+50999453 None:intergenic
CGCTTCATAGTTGCAAAGCT+AGG 0.525730 3:+50995350 None:intergenic
TGCCACGGTGAGGAAGAAGT+TGG 0.526868 3:-50999082 MsG0380014182.01.T01:CDS
GAAACGGCACCTGTGTGAAT+AGG 0.527965 3:+50995574 None:intergenic
TGAGACCCTGCTCCTGCCCA+CGG 0.528298 3:+50995952 None:intergenic
GGGGACTGCATTTGAAATGT+AGG 0.530758 3:+50995499 None:intergenic
ATTGATGGCGAAGCTGCAGC+AGG 0.535459 3:-51000453 MsG0380014182.01.T01:five_prime_UTR
TAGAAAACTAGAAAGAGAAT+GGG 0.537348 3:+51000720 None:intergenic
AGTTTGATTATGAAGTTGAA+TGG 0.538734 3:-50996480 MsG0380014182.01.T01:CDS
GAGACCCTGCTCCTGCCCAC+GGG 0.539583 3:+50995953 None:intergenic
GAGATTGGTGAAATTGAAGG+TGG 0.540099 3:-51000370 MsG0380014182.01.T01:CDS
GAGAGGCCAGGCAATGTTGA+TGG 0.540452 3:-50997109 MsG0380014182.01.T01:CDS
TATGGGTTTGAATGATTGGC+AGG 0.540682 3:-50999274 MsG0380014182.01.T01:CDS
CGACCAAATTTACAGTCAGC+AGG 0.543272 3:+50996576 None:intergenic
CTGTAAATTTGGTCGTGGAT+GGG 0.544411 3:-50996568 MsG0380014182.01.T01:CDS
TTATCTGGCAGAGTATCAAC+GGG 0.546387 3:+50995861 None:intergenic
CGAATACAAGCTTGAATAGA+CGG 0.547536 3:-50996037 MsG0380014182.01.T01:CDS
GAAGAAAGGAAGGCCATCAA+AGG 0.548262 3:-51000642 MsG0380014182.01.T01:five_prime_UTR
CATGAGAATGTTCACAGAAG+AGG 0.548744 3:-50995913 MsG0380014182.01.T01:CDS
ACCCTACATTAGAGCAACTT+GGG 0.551457 3:-50999047 MsG0380014182.01.T01:intron
TTGGGATTAAACTCTGCTGT+AGG 0.552799 3:+50996161 None:intergenic
CTCTTCTGTGAACATTCTCA+TGG 0.553265 3:+50995914 None:intergenic
ATTCGTCAGGCCAGGCGGAA+GGG 0.556070 3:+50995429 None:intergenic
GGTTTGAATGATTGGCAGGA+AGG 0.556190 3:-50999270 MsG0380014182.01.T01:CDS
TCAGTCCTCGAAGTCAATCA+AGG 0.556676 3:-50995465 MsG0380014182.01.T01:CDS
ACCCAAGTTGCTCTAATGTA+GGG 0.556761 3:+50999046 None:intergenic
GGGATACCATAGGTTGGTTG+GGG 0.556898 3:+50995544 None:intergenic
CAATCAATATTCGTCAGGCC+AGG 0.560133 3:+50995421 None:intergenic
ATGCTGAATATTCCTATACT+AGG 0.560603 3:-50996674 MsG0380014182.01.T01:CDS
AGGTGTAGCTGTGAGAGGCC+AGG 0.561530 3:-50997121 MsG0380014182.01.T01:CDS
GAAGAGATTGGTGAAATTGA+AGG 0.561611 3:-51000373 MsG0380014182.01.T01:CDS
ATCCCCTCAATCACAACCGC+GGG 0.562724 3:-50995526 MsG0380014182.01.T01:CDS
TCCTTCGTATGCAGTACCAT+TGG 0.563220 3:+50996368 None:intergenic
ACATGGTTCAGGTCGCTAAG+AGG 0.563392 3:-51000664 MsG0380014182.01.T01:five_prime_UTR
GAATGGTGACACAAATGGTA+AGG 0.563418 3:-50996463 MsG0380014182.01.T01:CDS
GATACAAATGAAGTTGTTAG+CGG 0.566265 3:-50996083 MsG0380014182.01.T01:CDS
AGCTTGAATAGACGGTTGAC+TGG 0.567004 3:-50996029 MsG0380014182.01.T01:CDS
TGTGATTGAGGGGATACCAT+AGG 0.574994 3:+50995534 None:intergenic
AATGTTGATGGTACTGTGGA+GGG 0.576254 3:-50997097 MsG0380014182.01.T01:CDS
GCACCTGTGTGAATAGGTTG+AGG 0.580595 3:+50995580 None:intergenic
CGAGGACTGAGACCTCTCCA+AGG 0.581285 3:+50995478 None:intergenic
TTTATCTGGCAGAGTATCAA+CGG 0.582297 3:+50995860 None:intergenic
GGCAAAGAATTCAAGTTCCT+AGG 0.583749 3:+50996128 None:intergenic
AAATTTGGTCGTGGATGGGT+TGG 0.587224 3:-50996564 MsG0380014182.01.T01:CDS
GCTGACTGTAAATTTGGTCG+TGG 0.588642 3:-50996573 MsG0380014182.01.T01:CDS
AACACTTCTGAAGCTTGTCA+AGG 0.590275 3:+50999399 None:intergenic
ACACACCTCTTCCGGATCAC+CGG 0.592718 3:+50999225 None:intergenic
TACCCCAGGCAATGCTTCAG+TGG 0.594197 3:-50995811 MsG0380014182.01.T01:CDS
TCGCTAAGAGGAAGAAAGGA+AGG 0.594788 3:-51000652 MsG0380014182.01.T01:five_prime_UTR
TCTTCAGATTGTCCTACCAA+TGG 0.597040 3:-50996384 MsG0380014182.01.T01:CDS
CTCACCGTGGCAAAATCCAT+GGG 0.599252 3:+50999093 None:intergenic
TGGTTGGGGAAACTGTGAAA+CGG 0.600530 3:+50995558 None:intergenic
AGAAGAGGCTCAAAAGCCAC+AGG 0.603210 3:-50995898 MsG0380014182.01.T01:CDS
AACCTGAAACAGAAACAAAG+TGG 0.604187 3:+50999673 None:intergenic
ATATTGATTGTCAATCTCCA+GGG 0.605908 3:-50995408 MsG0380014182.01.T01:CDS
AAGTGCCTGTTGAATCCTGT+TGG 0.612736 3:+50996599 None:intergenic
CCGTGAATCGGATTCCGTTG+CGG 0.613445 3:+51000581 None:intergenic
AGGAACAGGAATTCAATCAC+AGG 0.614282 3:-50998763 MsG0380014182.01.T01:intron
CAATGTTGATGGTACTGTGG+AGG 0.614427 3:-50997098 MsG0380014182.01.T01:CDS
AAAATCTTCCTATCAGGCAA+CGG 0.616113 3:+50999431 None:intergenic
GCTGCAGCAGGAAGAACGAG+AGG 0.616432 3:-51000441 MsG0380014182.01.T01:five_prime_UTR
CCAAGTTCCTATCCGATGCA+AGG 0.617788 3:-50997141 MsG0380014182.01.T01:CDS
GAGGACTGAGACCTCTCCAA+GGG 0.619974 3:+50995479 None:intergenic
GGCCCGCGGTTGTGATTGAG+GGG 0.623428 3:+50995524 None:intergenic
ACTGCATTTGAAATGTAGGT+CGG 0.624268 3:+50995503 None:intergenic
CAAATGCAGTCCCCTTGGAG+AGG 0.625330 3:-50995490 MsG0380014182.01.T01:CDS
GAACACCAGCCAATATCGCA+CGG 0.629142 3:-50999458 MsG0380014182.01.T01:CDS
TGATGTGATTGAGCATCCCA+TGG 0.629637 3:-50999109 MsG0380014182.01.T01:CDS
ATGCAAGGTGTAGCTGTGAG+AGG 0.629831 3:-50997126 MsG0380014182.01.T01:CDS
TTGAAATGTAGGTCGGCCCG+CGG 0.629987 3:+50995510 None:intergenic
TAGTATAGGAATATTCAGCA+TGG 0.630030 3:+50996676 None:intergenic
AAGTTGAATGGTGACACAAA+TGG 0.632683 3:-50996468 MsG0380014182.01.T01:CDS
TATACCTCACGTTCTTGCGA+CGG 0.633464 3:+51000550 None:intergenic
GTCTCCGTCGCAAGAACGTG+AGG 0.635220 3:-51000554 MsG0380014182.01.T01:five_prime_UTR
TGTAAATGGACAGAAGCTTG+AGG 0.636293 3:-50996415 MsG0380014182.01.T01:CDS
CTCACAGCTACACCTTGCAT+CGG 0.636375 3:+50997129 None:intergenic
AACACCAGCCAATATCGCAC+GGG 0.639949 3:-50999457 MsG0380014182.01.T01:CDS
ATTGGCAGGAAGGACACGTA+TGG 0.640221 3:-50999260 MsG0380014182.01.T01:CDS
TCGTATGCAGTACCATTGGT+AGG 0.642869 3:+50996372 None:intergenic
TCAATATTCGTCAGGCCAGG+CGG 0.643207 3:+50995424 None:intergenic
GTTAGCGGAGAATTGTCTGA+CGG 0.652562 3:-50996068 MsG0380014182.01.T01:CDS
AGCTACACCTTGCATCGGAT+AGG 0.653231 3:+50997134 None:intergenic
ATTGAGGGGATACCATAGGT+TGG 0.657791 3:+50995538 None:intergenic
TGAATCGGATTCCGTTGCGG+CGG 0.659958 3:+51000584 None:intergenic
GAAAGGAAGGCCATCAAAGG+CGG 0.662134 3:-51000639 MsG0380014182.01.T01:five_prime_UTR
TCTGGACAAAGAGATACCCC+AGG 0.666635 3:-50995825 MsG0380014182.01.T01:CDS
TGCCACTGAAGCATTGCCTG+GGG 0.669698 3:+50995809 None:intergenic
ATCCCAAAGAGAGTGCGCCT+AGG 0.672210 3:-50996145 MsG0380014182.01.T01:CDS
ACCAATGGTACTGCATACGA+AGG 0.673117 3:-50996369 MsG0380014182.01.T01:CDS
GCGGCCTGAGATCAGCGACG+CGG 0.673715 3:+51000606 None:intergenic
TGCCAACTTCTTCCTCACCG+TGG 0.675857 3:+50999080 None:intergenic
AATGGTGACACAAATGGTAA+GGG 0.676892 3:-50996462 MsG0380014182.01.T01:CDS
AACATTCTCATGGACTGAAG+TGG 0.679729 3:+50995924 None:intergenic
TGAAGCTGAAGAAGATAGTG+CGG 0.682265 3:-51000318 MsG0380014182.01.T01:intron
ATTACCAAGCATAAATATCG+GGG 0.684343 3:+50996521 None:intergenic
GGTGAATAATTAGAAGCCTG+TGG 0.686480 3:+50995882 None:intergenic
ATGTTGATGGTACTGTGGAG+GGG 0.689562 3:-50997096 MsG0380014182.01.T01:CDS
AGGACTGAGACCTCTCCAAG+GGG 0.690597 3:+50995480 None:intergenic
TATCCCCTCAATCACAACCG+CGG 0.692573 3:-50995527 MsG0380014182.01.T01:CDS
AGGCAATGTTGATGGTACTG+TGG 0.695444 3:-50997101 MsG0380014182.01.T01:CDS
TATAATATAATCGAATACGA+TGG 0.695911 3:-51000531 MsG0380014182.01.T01:five_prime_UTR
AGACCTCAACCTATTCACAC+AGG 0.712069 3:-50995583 MsG0380014182.01.T01:CDS
GAATTCTAGAGAGAGAAACA+TGG 0.741485 3:-51000681 MsG0380014182.01.T01:five_prime_UTR
CAACGGAATCCGATTCACGG+CGG 0.776416 3:-51000578 MsG0380014182.01.T01:five_prime_UTR
TTGGAAAAGAGAAGATCACG+CGG 0.779543 3:-51000413 MsG0380014182.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGAATAAAAAAAAATTTCT+AGG - Chr3:50996031-50996050 MsG0380014182.01.T01:CDS 10.0%
!! TTAAAATCATTATAAATCAT+AGG + Chr3:50998401-50998420 None:intergenic 10.0%
!!! ATGATTTATAATGATTTTAA+TGG - Chr3:50998401-50998420 MsG0380014182.01.T01:intron 10.0%
!!! TATTTATTTTTTCTTGAAAT+TGG - Chr3:50997146-50997165 MsG0380014182.01.T01:intron 10.0%
!! TTTATGAATACATACTTAAA+TGG - Chr3:50997349-50997368 MsG0380014182.01.T01:intron 15.0%
!!! ACTAATATAAGATTTTCATA+TGG + Chr3:50998311-50998330 None:intergenic 15.0%
!!! TAATTGTATTTTTTGAATAC+AGG - Chr3:50999441-50999460 MsG0380014182.01.T01:CDS 15.0%
!!! TATTTTACTAGAAAAAGTTT+CGG + Chr3:50998050-50998069 None:intergenic 15.0%
!!! TGTTTTTTTTTACTCAATAT+AGG - Chr3:50997230-50997249 MsG0380014182.01.T01:intron 15.0%
!!! TTGTTTAATTTTTTACTGTT+AGG - Chr3:50996667-50996686 MsG0380014182.01.T01:CDS 15.0%
!!! TTTTATATCACTGTAATTTT+GGG - Chr3:50996364-50996383 MsG0380014182.01.T01:CDS 15.0%
!!! TTTTTATATCACTGTAATTT+TGG - Chr3:50996363-50996382 MsG0380014182.01.T01:CDS 15.0%
!!! TTTTTTTTTTTCTCTCTATT+TGG + Chr3:50995360-50995379 None:intergenic 15.0%
!! AAATTCATTAAAGAAAAGAC+AGG + Chr3:50997263-50997282 None:intergenic 20.0%
!! ATAATATGAATTGCATCATT+TGG - Chr3:50997743-50997762 MsG0380014182.01.T01:intron 20.0%
!! TAATATGAATTGCATCATTT+GGG - Chr3:50997744-50997763 MsG0380014182.01.T01:intron 20.0%
!! TATAATATAATCGAATACGA+TGG - Chr3:50995616-50995635 MsG0380014182.01.T01:CDS 20.0%
!! TTTAATGAATTTGTCAAAGA+TGG - Chr3:50997271-50997290 MsG0380014182.01.T01:intron 20.0%
!!! AAATATTTTCATTTCACCTT+TGG - Chr3:50997889-50997908 MsG0380014182.01.T01:intron 20.0%
!!! AGGTATTGAATTTTAAGATT+CGG - Chr3:50996602-50996621 MsG0380014182.01.T01:CDS 20.0%
!!! ATGGAGTCTAATATATATTT+TGG - Chr3:50996297-50996316 MsG0380014182.01.T01:intron 20.0%
!!! TTCTAGTTTTTTTCAGTATT+GGG + Chr3:50997422-50997441 None:intergenic 20.0%
!!! TTTATATCACTGTAATTTTG+GGG - Chr3:50996365-50996384 MsG0380014182.01.T01:CDS 20.0%
!!! TTTCTAGTTTTTTTCAGTAT+TGG + Chr3:50997423-50997442 None:intergenic 20.0%
! AATTCATATTATACTCCTGT+AGG + Chr3:50997735-50997754 None:intergenic 25.0%
! AGTTTGATTATGAAGTTGAA+TGG - Chr3:50999667-50999686 MsG0380014182.01.T01:intron 25.0%
! CTAAATTTCCATAGATCAAA+AGG + Chr3:50998491-50998510 None:intergenic 25.0%
! GAAGAAGAAATTGAAATTGA+TGG - Chr3:50995679-50995698 MsG0380014182.01.T01:intron 25.0%
! GGAAGAAAAGCAAATTAAAA+CGG + Chr3:50999197-50999216 None:intergenic 25.0%
! TAGAAAACTAGAAAGAGAAT+GGG + Chr3:50995430-50995449 None:intergenic 25.0%
! TAGATTTCTGTTGAAAATCT+AGG - Chr3:50995891-50995910 MsG0380014182.01.T01:CDS 25.0%
! TCTAATGATGACAGATATAA+GGG - Chr3:50996428-50996447 MsG0380014182.01.T01:CDS 25.0%
! TGATTACCAAGCATAAATAT+CGG + Chr3:50999631-50999650 None:intergenic 25.0%
! TTAAAATCAGAACAGAAAAC+CGG - Chr3:50998888-50998907 MsG0380014182.01.T01:intron 25.0%
! TTCAGTATATCATATCTTTC+AGG + Chr3:50998233-50998252 None:intergenic 25.0%
! TTCTAATGATGACAGATATA+AGG - Chr3:50996427-50996446 MsG0380014182.01.T01:CDS 25.0%
!! AACATATCTTTTATCTACAC+GGG + Chr3:50998122-50998141 None:intergenic 25.0%
!! ATTTTTCTCTCTAACTAGTA+TGG - Chr3:50998437-50998456 MsG0380014182.01.T01:intron 25.0%
!! CAACATATCTTTTATCTACA+CGG + Chr3:50998123-50998142 None:intergenic 25.0%
!! TAATCAAACTAGTTTCTTTC+TGG + Chr3:50999657-50999676 None:intergenic 25.0%
!! TAGAATTTTCTAATGTGAGT+TGG - Chr3:50996944-50996963 MsG0380014182.01.T01:intron 25.0%
!! TTCAGAAATTTTTGCAATAG+TGG + Chr3:50998540-50998559 None:intergenic 25.0%
!!! AATCCTTCTAATGGTTTTAA+TGG - Chr3:50999802-50999821 MsG0380014182.01.T01:intron 25.0%
!!! ACTTATTTTTGCGTAATTCA+CGG - Chr3:50996133-50996152 MsG0380014182.01.T01:CDS 25.0%
!!! AGTTGTTGTTATTGTTGTTT+AGG - Chr3:50996518-50996537 MsG0380014182.01.T01:CDS 25.0%
!!! GGATTATTTTGATTACTAGA+GGG + Chr3:50999935-50999954 None:intergenic 25.0%
!!! GTTGTTGTTATTGTTGTTTA+GGG - Chr3:50996519-50996538 MsG0380014182.01.T01:CDS 25.0%
!!! TCTAGTTTTTTTCAGTATTG+GGG + Chr3:50997421-50997440 None:intergenic 25.0%
!!! TGTATTTTTTGAATACAGGT+TGG - Chr3:50999445-50999464 MsG0380014182.01.T01:CDS 25.0%
!!! TTGTCTTTTTCAAGTTTTAC+TGG - Chr3:50996220-50996239 MsG0380014182.01.T01:CDS 25.0%
AAAAGTGATGTGTACTGAAA+AGG - Chr3:50996582-50996601 MsG0380014182.01.T01:CDS 30.0%
AAATATTTCCTTCCACTTCA+TGG + Chr3:50997877-50997896 None:intergenic 30.0%
AAATTGCCAAAATTCCTAGA+TGG + Chr3:50999873-50999892 None:intergenic 30.0%
AACATGTGCGAATAATTGAA+GGG + Chr3:50997643-50997662 None:intergenic 30.0%
AAGTTTCAGAAACACACAAA+AGG + Chr3:50996639-50996658 None:intergenic 30.0%
AATACTGAACATCCTGTAAA+TGG - Chr3:50999718-50999737 MsG0380014182.01.T01:intron 30.0%
AATATTTCCTTCCACTTCAT+GGG + Chr3:50997876-50997895 None:intergenic 30.0%
AATTCACGGTCTTTGATAAA+AGG - Chr3:50996147-50996166 MsG0380014182.01.T01:CDS 30.0%
AATTGCCAAAATTCCTAGAT+GGG + Chr3:50999872-50999891 None:intergenic 30.0%
ACTCCATTAAAACCATTAGA+AGG + Chr3:50999808-50999827 None:intergenic 30.0%
ATATTCCTATACTAGGAGTT+TGG - Chr3:50999480-50999499 MsG0380014182.01.T01:intron 30.0%
ATGCTGAATATTCCTATACT+AGG - Chr3:50999473-50999492 MsG0380014182.01.T01:intron 30.0%
ATTACCAAGCATAAATATCG+GGG + Chr3:50999629-50999648 None:intergenic 30.0%
ATTACCTGTATAATGCTTAG+TGG - Chr3:50996807-50996826 MsG0380014182.01.T01:intron 30.0%
ATTGACAATCAATATTCGTC+AGG + Chr3:51000734-51000753 None:intergenic 30.0%
ATTTACAGGATGTTCAGTAT+TGG + Chr3:50999719-50999738 None:intergenic 30.0%
CAAATTAAAACGGAATAACC+AGG + Chr3:50999187-50999206 None:intergenic 30.0%
CTAACAACTTCATTTGTATC+TGG + Chr3:51000064-51000083 None:intergenic 30.0%
CTAGAAAACTAGAAAGAGAA+TGG + Chr3:50995431-50995450 None:intergenic 30.0%
GAAGATAACCTGATATGATA+TGG - Chr3:50999135-50999154 MsG0380014182.01.T01:intron 30.0%
GAAGATTGTTCTTATTAGAC+TGG + Chr3:51000530-51000549 None:intergenic 30.0%
GAATAAGAGCTTGAAAAAAG+TGG - Chr3:50999895-50999914 MsG0380014182.01.T01:intron 30.0%
GATACAAATGAAGTTGTTAG+CGG - Chr3:51000064-51000083 MsG0380014182.01.T01:intron 30.0%
GATTACCAAGCATAAATATC+GGG + Chr3:50999630-50999649 None:intergenic 30.0%
GCAAGGATAAAATTGTTCTA+AGG + Chr3:50997989-50998008 None:intergenic 30.0%
GTGAAAACACAACTATCATA+AGG + Chr3:50997798-50997817 None:intergenic 30.0%
TAATCAAAATAATCCCAGTC+TGG - Chr3:50999940-50999959 MsG0380014182.01.T01:intron 30.0%
TAATGAAGTCTAGTTGTTTG+TGG - Chr3:50996325-50996344 MsG0380014182.01.T01:intron 30.0%
TAGTATAGGAATATTCAGCA+TGG + Chr3:50999474-50999493 None:intergenic 30.0%
TCAATCACATCATGATAATC+AGG + Chr3:50997030-50997049 None:intergenic 30.0%
TGGTTACTGTATGTTTCAAT+AGG - Chr3:50999361-50999380 MsG0380014182.01.T01:intron 30.0%
TTAACCAAAGAATTAGAGAC+CGG + Chr3:50998910-50998929 None:intergenic 30.0%
TTCTTCTATGGAGACATAAT+TGG - Chr3:50997201-50997220 MsG0380014182.01.T01:intron 30.0%
TTTACAGGATGTTCAGTATT+GGG + Chr3:50999718-50999737 None:intergenic 30.0%
! AATATTGATTGTCAATCTCC+AGG - Chr3:51000738-51000757 MsG0380014182.01.T01:five_prime_UTR 30.0%
! ACATATCTTTTATCTACACG+GGG + Chr3:50998121-50998140 None:intergenic 30.0%
! ACCTTTGTCTTGCAATTTTA+TGG + Chr3:50998609-50998628 None:intergenic 30.0%
! ATATTGATTGTCAATCTCCA+GGG - Chr3:51000739-51000758 MsG0380014182.01.T01:five_prime_UTR 30.0%
! ATCTATCTGTGTTGTTATAG+CGG - Chr3:50996070-50996089 MsG0380014182.01.T01:CDS 30.0%
! CCTTTGTCTTGCAATTTTAT+GGG + Chr3:50998608-50998627 None:intergenic 30.0%
! GAATTGCAGAAATCTGATTT+TGG + Chr3:51000431-51000450 None:intergenic 30.0%
! GCAAACAATATTTAGAACAC+AGG + Chr3:50998257-50998276 None:intergenic 30.0%
! GGTACAAAGTTGATTCAAAA+GGG - Chr3:50996449-50996468 MsG0380014182.01.T01:CDS 30.0%
! TATTAGTGCCTTTTGATCTA+TGG - Chr3:50998480-50998499 MsG0380014182.01.T01:intron 30.0%
! TGCATACAATATTTTGCGTT+TGG - Chr3:50998156-50998175 MsG0380014182.01.T01:intron 30.0%
!! AATATTGCATTTAGCTCTTG+GGG - Chr3:50997957-50997976 MsG0380014182.01.T01:intron 30.0%
!! CAATATTGCATTTAGCTCTT+GGG - Chr3:50997956-50997975 MsG0380014182.01.T01:intron 30.0%
!! TCAATATTGCATTTAGCTCT+TGG - Chr3:50997955-50997974 MsG0380014182.01.T01:intron 30.0%
!! TCAGGTTGTGTGATTTTAAT+GGG - Chr3:50996490-50996509 MsG0380014182.01.T01:CDS 30.0%
!! TTTGGCTTTGATTTATCCTA+TGG - Chr3:50998973-50998992 MsG0380014182.01.T01:intron 30.0%
!!! GGGATTATTTTGATTACTAG+AGG + Chr3:50999936-50999955 None:intergenic 30.0%
!!! TTCAGGTTGTGTGATTTTAA+TGG - Chr3:50996489-50996508 MsG0380014182.01.T01:CDS 30.0%
!!! TTGTTAGCTATAGTTTTGTC+AGG - Chr3:50997325-50997344 MsG0380014182.01.T01:intron 30.0%
AAAACCGGTCTCTAATTCTT+TGG - Chr3:50998903-50998922 MsG0380014182.01.T01:intron 35.0%
AAAATCTTCCTATCAGGCAA+CGG + Chr3:50996719-50996738 None:intergenic 35.0%
AAAATTCTACACACCTCTTC+CGG + Chr3:50996933-50996952 None:intergenic 35.0%
AAAGCCAAAAGATTCTTGTG+AGG + Chr3:50998962-50998981 None:intergenic 35.0%
AAATTCGCGATTGACATCAA+TGG - Chr3:50996278-50996297 MsG0380014182.01.T01:intron 35.0%
AACCTGAAACAGAAACAAAG+TGG + Chr3:50996477-50996496 None:intergenic 35.0%
AAGAATATGGTCTCCAAGAT+GGG - Chr3:50999228-50999247 MsG0380014182.01.T01:CDS 35.0%
AAGACATGACATTGAGAGAA+AGG + Chr3:50997525-50997544 None:intergenic 35.0%
AAGCATAAACCGTGATATCA+GGG + Chr3:50998371-50998390 None:intergenic 35.0%
AAGTCAATCAAGGCAAAAAC+AGG - Chr3:51000692-51000711 MsG0380014182.01.T01:five_prime_UTR 35.0%
AAGTTGAATGGTGACACAAA+TGG - Chr3:50999679-50999698 MsG0380014182.01.T01:CDS 35.0%
AATGGTGACACAAATGGTAA+GGG - Chr3:50999685-50999704 MsG0380014182.01.T01:CDS 35.0%
ACAGGAAACCATATCATATC+AGG + Chr3:50999146-50999165 None:intergenic 35.0%
ACATGTGCGAATAATTGAAG+GGG + Chr3:50997642-50997661 None:intergenic 35.0%
ACTGTATGGGTTTGAATGAT+TGG - Chr3:50996869-50996888 MsG0380014182.01.T01:intron 35.0%
ACTTCCAAAATCTTCCTATC+AGG + Chr3:50996725-50996744 None:intergenic 35.0%
AGTCAATCAAGGCAAAAACA+GGG - Chr3:51000693-51000712 MsG0380014182.01.T01:five_prime_UTR 35.0%
ATAAATATCGGGGTTGGAAT+CGG + Chr3:50999619-50999638 None:intergenic 35.0%
ATCAGCATATTCACGAATTC+AGG - Chr3:51000477-51000496 MsG0380014182.01.T01:five_prime_UTR 35.0%
ATGCAATGAATACAATGCAC+CGG - Chr3:50998697-50998716 MsG0380014182.01.T01:intron 35.0%
ATTGCCAAAATTCCTAGATG+GGG + Chr3:50999871-50999890 None:intergenic 35.0%
ATTTGAACATCCAACTCAAG+TGG + Chr3:50996989-50997008 None:intergenic 35.0%
CAACATGTGCGAATAATTGA+AGG + Chr3:50997644-50997663 None:intergenic 35.0%
CAACGTATGTGTTAGTAAAC+AGG - Chr3:50997839-50997858 MsG0380014182.01.T01:intron 35.0%
CACGAACAATACAAGAACTT+GGG - Chr3:50998815-50998834 MsG0380014182.01.T01:intron 35.0%
CCATATTCTTCCTGTAACAA+TGG + Chr3:50999218-50999237 None:intergenic 35.0%
CCATTGTTACAGGAAGAATA+TGG - Chr3:50999215-50999234 MsG0380014182.01.T01:CDS 35.0%
CCCATAAAATTGCAAGACAA+AGG - Chr3:50998605-50998624 MsG0380014182.01.T01:intron 35.0%
CGAATACAAGCTTGAATAGA+CGG - Chr3:51000110-51000129 MsG0380014182.01.T01:intron 35.0%
CTATAAAAGGTGAGAAACGT+TGG - Chr3:50996093-50996112 MsG0380014182.01.T01:CDS 35.0%
GAAGAAGATGAAGAAGAGAT+TGG - Chr3:50995762-50995781 MsG0380014182.01.T01:intron 35.0%
GAAGAGATTGGTGAAATTGA+AGG - Chr3:50995774-50995793 MsG0380014182.01.T01:intron 35.0%
GGAAGAAGTTTGAGAAGTTA+AGG - Chr3:50998839-50998858 MsG0380014182.01.T01:intron 35.0%
GTCGAATCTGTTCTAATGAT+TGG + Chr3:50999311-50999330 None:intergenic 35.0%
GTTGTTATAGCGGCTATAAA+AGG - Chr3:50996080-50996099 MsG0380014182.01.T01:CDS 35.0%
TAAAGCTGAGATGTTATGTC+AGG - Chr3:50999103-50999122 MsG0380014182.01.T01:CDS 35.0%
TACGAAGGAAATCCTTCTAA+TGG - Chr3:50999793-50999812 MsG0380014182.01.T01:intron 35.0%
TCAGCATATTCACGAATTCA+GGG - Chr3:51000478-51000497 MsG0380014182.01.T01:five_prime_UTR 35.0%
TCCTAACATCAGTATCTTAC+AGG + Chr3:50999164-50999183 None:intergenic 35.0%
TCCTGTAAGATACTGATGTT+AGG - Chr3:50999160-50999179 MsG0380014182.01.T01:intron 35.0%
TGAATTCGTGAATATGCTGA+TGG + Chr3:51000478-51000497 None:intergenic 35.0%
TTAAATGGCATGCTACTGAT+AGG - Chr3:50997364-50997383 MsG0380014182.01.T01:intron 35.0%
TTAAGCAAGATCACATTGCA+AGG + Chr3:50998006-50998025 None:intergenic 35.0%
TTTACCGCTATATTTGCTTC+AGG - Chr3:50998792-50998811 MsG0380014182.01.T01:CDS 35.0%
TTTGAACATCCAACTCAAGT+GGG + Chr3:50996988-50997007 None:intergenic 35.0%
TTTGTGTTCTACGAACAATG+TGG - Chr3:50998759-50998778 MsG0380014182.01.T01:intron 35.0%
! AAACCCTCAAAAGTACATGA+AGG + Chr3:50997701-50997720 None:intergenic 35.0%
! AACTAGAAAGAGAATGGGTT+TGG + Chr3:50995425-50995444 None:intergenic 35.0%
! AATGCTTAGTGGTGTGTTTT+TGG - Chr3:50996818-50996837 MsG0380014182.01.T01:intron 35.0%
! AATTCCCCATCTAGGAATTT+TGG - Chr3:50999864-50999883 MsG0380014182.01.T01:intron 35.0%
! ACTGCATTTGAAATGTAGGT+CGG + Chr3:51000647-51000666 None:intergenic 35.0%
! AGTCCTTCATGTACTTTTGA+GGG - Chr3:50997695-50997714 MsG0380014182.01.T01:intron 35.0%
! ATGCTTAGTGGTGTGTTTTT+GGG - Chr3:50996819-50996838 MsG0380014182.01.T01:intron 35.0%
! GAATTCTAGAGAGAGAAACA+TGG - Chr3:50995466-50995485 MsG0380014182.01.T01:CDS 35.0%
! GCTAACAAACCACATTTTCA+CGG + Chr3:50997313-50997332 None:intergenic 35.0%
! GGGTACAAAGTTGATTCAAA+AGG - Chr3:50996448-50996467 MsG0380014182.01.T01:CDS 35.0%
! GGTGTGATTTTGTTCTTCTA+TGG - Chr3:50997189-50997208 MsG0380014182.01.T01:intron 35.0%
! TAGTCCTTCATGTACTTTTG+AGG - Chr3:50997694-50997713 MsG0380014182.01.T01:intron 35.0%
! TGCTTTTCTTCCATTGTTAC+AGG - Chr3:50999205-50999224 MsG0380014182.01.T01:intron 35.0%
! TTTATCTGGCAGAGTATCAA+CGG + Chr3:51000290-51000309 None:intergenic 35.0%
! TTTGTTGTACTCTCAGATGA+TGG + Chr3:51000145-51000164 None:intergenic 35.0%
!! AATGATTTTAATGGCCACTG+AGG - Chr3:50998410-50998429 MsG0380014182.01.T01:intron 35.0%
!! CAGGTTGTGTGATTTTAATG+GGG - Chr3:50996491-50996510 MsG0380014182.01.T01:CDS 35.0%
!! TGAAATTGGTTGTTTTGCGA+TGG - Chr3:50997160-50997179 MsG0380014182.01.T01:intron 35.0%
AAATGACTTCCTTCCCATCT+TGG + Chr3:50999244-50999263 None:intergenic 40.0%
AAGATACTGATGTTAGGACC+TGG - Chr3:50999166-50999185 MsG0380014182.01.T01:intron 40.0%
AAGGAGCTGTTCTGATTGTT+TGG + Chr3:51000168-51000187 None:intergenic 40.0%
AATAATTGAAGGGGCAGCAA+AGG + Chr3:50997633-50997652 None:intergenic 40.0%
AATCAGCAAATTCCCCATCT+AGG - Chr3:50999856-50999875 MsG0380014182.01.T01:intron 40.0%
AATCAGTGTCATGTCAGTGT+CGG + Chr3:50996178-50996197 None:intergenic 40.0%
ACATGACGATGCAGTAACAA+TGG + Chr3:50998079-50998098 None:intergenic 40.0%
ACCCAAGTTGCTCTAATGTA+GGG + Chr3:50997104-50997123 None:intergenic 40.0%
ACCCACTGAAAGATTGGATT+TGG - Chr3:50997816-50997835 MsG0380014182.01.T01:intron 40.0%
ACCCTACATTAGAGCAACTT+GGG - Chr3:50997100-50997119 MsG0380014182.01.T01:CDS 40.0%
ACTGTAAATTTGGTCGTGGA+TGG - Chr3:50999578-50999597 MsG0380014182.01.T01:intron 40.0%
AGACACCAAGCAAGTATCAT+GGG + Chr3:50997497-50997516 None:intergenic 40.0%
AGAGAAAAATGATGCCTCAG+TGG + Chr3:50998427-50998446 None:intergenic 40.0%
AGGAACAGGAATTCAATCAC+AGG - Chr3:50997384-50997403 MsG0380014182.01.T01:intron 40.0%
AGTAACCACCTATGAAGAAC+AGG + Chr3:50998198-50998217 None:intergenic 40.0%
ATAATTGAAGGGGCAGCAAA+GGG + Chr3:50997632-50997651 None:intergenic 40.0%
ATCTACCTTAACCCATGAAG+TGG - Chr3:50997862-50997881 MsG0380014182.01.T01:intron 40.0%
ATTGTTTGCCCATGAATCAG+TGG - Chr3:50998268-50998287 MsG0380014182.01.T01:intron 40.0%
CAAAGAGTTCCCTGATATCA+CGG - Chr3:50998359-50998378 MsG0380014182.01.T01:intron 40.0%
CACACCACTAAGCATTATAC+AGG + Chr3:50996814-50996833 None:intergenic 40.0%
CATGAGAATGTTCACAGAAG+AGG - Chr3:51000234-51000253 MsG0380014182.01.T01:intron 40.0%
CATGATGTACCGTGAAAATG+TGG - Chr3:50997301-50997320 MsG0380014182.01.T01:intron 40.0%
CGAATTGTGACAGTCTAACT+TGG - Chr3:50997930-50997949 MsG0380014182.01.T01:intron 40.0%
CGACATTTATGACCTTTGAG+AGG - Chr3:50999327-50999346 MsG0380014182.01.T01:intron 40.0%
CTCTTCTGTGAACATTCTCA+TGG + Chr3:51000236-51000255 None:intergenic 40.0%
CTGGAAAGACATTCACTAGA+CGG + Chr3:51000511-51000530 None:intergenic 40.0%
CTGTAAATTTGGTCGTGGAT+GGG - Chr3:50999579-50999598 MsG0380014182.01.T01:intron 40.0%
GAACAATACAAGAACTTGGG+CGG - Chr3:50998818-50998837 MsG0380014182.01.T01:intron 40.0%
GAAGAATATGGTCTCCAAGA+TGG - Chr3:50999227-50999246 MsG0380014182.01.T01:CDS 40.0%
GAAGCAATGTTCCAAACAAC+AGG + Chr3:50999529-50999548 None:intergenic 40.0%
GAAGCATAAACCGTGATATC+AGG + Chr3:50998372-50998391 None:intergenic 40.0%
GAATGGTGACACAAATGGTA+AGG - Chr3:50999684-50999703 MsG0380014182.01.T01:CDS 40.0%
GAGATTGGTGAAATTGAAGG+TGG - Chr3:50995777-50995796 MsG0380014182.01.T01:intron 40.0%
GATAAACCATCAGCTCAATC+TGG - Chr3:51000304-51000323 MsG0380014182.01.T01:intron 40.0%
GATACCTTGCAGAACTTTGA+AGG - Chr3:50997448-50997467 MsG0380014182.01.T01:intron 40.0%
GATTGAGCTGATGGTTTATC+TGG + Chr3:51000304-51000323 None:intergenic 40.0%
GCACGAACAATACAAGAACT+TGG - Chr3:50998814-50998833 MsG0380014182.01.T01:intron 40.0%
GCCAAATCCAATCTTTCAGT+GGG + Chr3:50997820-50997839 None:intergenic 40.0%
GGAGTAATTCATTCACGAGA+CGG + Chr3:50998587-50998606 None:intergenic 40.0%
GGATTAATTCGAACGTACTC+AGG - Chr3:50998860-50998879 MsG0380014182.01.T01:intron 40.0%
GGTGAATAATTAGAAGCCTG+TGG + Chr3:51000268-51000287 None:intergenic 40.0%
GTAAATGGACAGAAGCTTGA+GGG - Chr3:50999733-50999752 MsG0380014182.01.T01:intron 40.0%
GTCAGTCAAGAAACAACCAA+AGG + Chr3:50997908-50997927 None:intergenic 40.0%
GTTAGAAGCAAGCAACAAGA+GGG + Chr3:50997548-50997567 None:intergenic 40.0%
TACCCAAGTTGCTCTAATGT+AGG + Chr3:50997105-50997124 None:intergenic 40.0%
TACCCTACATTAGAGCAACT+TGG - Chr3:50997099-50997118 MsG0380014182.01.T01:CDS 40.0%
TAGACCTTCAAAGTTCTGCA+AGG + Chr3:50997455-50997474 None:intergenic 40.0%
TAGAGAGAGAAACATGGTTC+AGG - Chr3:50995472-50995491 MsG0380014182.01.T01:CDS 40.0%
TATGGGTTTGAATGATTGGC+AGG - Chr3:50996873-50996892 MsG0380014182.01.T01:intron 40.0%
TCAAGCTTCTGTCCATTTAC+AGG + Chr3:50999733-50999752 None:intergenic 40.0%
TCTACAATCTCTCTACCCTA+CGG - Chr3:50997471-50997490 MsG0380014182.01.T01:intron 40.0%
TCTTCAGATTGTCCTACCAA+TGG - Chr3:50999763-50999782 MsG0380014182.01.T01:intron 40.0%
TGAAGCTGAAGAAGATAGTG+CGG - Chr3:50995829-50995848 MsG0380014182.01.T01:CDS 40.0%
TGAGGTCTAGGTGAATGAAA+TGG + Chr3:51000552-51000571 None:intergenic 40.0%
TGCCAAATCCAATCTTTCAG+TGG + Chr3:50997821-50997840 None:intergenic 40.0%
TGTAAATGGACAGAAGCTTG+AGG - Chr3:50999732-50999751 MsG0380014182.01.T01:intron 40.0%
TTCTTCATAGGTGGTTACTC+AGG - Chr3:50998199-50998218 MsG0380014182.01.T01:intron 40.0%
TTGAAACTCTGACACAGACA+CGG + Chr3:50996260-50996279 None:intergenic 40.0%
TTGGAAAAGAGAAGATCACG+CGG - Chr3:50995734-50995753 MsG0380014182.01.T01:intron 40.0%
TTGGATGAACCAGTATTCTC+AGG + Chr3:51000412-51000431 None:intergenic 40.0%
TTGGGATTAAACTCTGCTGT+AGG + Chr3:50999989-51000008 None:intergenic 40.0%
! AACATTCTCATGGACTGAAG+TGG + Chr3:51000226-51000245 None:intergenic 40.0%
! AATCTAGGACCTGAGAATAC+TGG - Chr3:51000400-51000419 MsG0380014182.01.T01:exon 40.0%
! CTTCCTGCTGACTGTAAATT+TGG - Chr3:50999568-50999587 MsG0380014182.01.T01:intron 40.0%
! GGCAAAGAATTCAAGTTCCT+AGG + Chr3:51000022-51000041 None:intergenic 40.0%
! GTTGCCTGATAGGAAGATTT+TGG - Chr3:50996718-50996737 MsG0380014182.01.T01:intron 40.0%
! GTTTCCAAAAGTATGCCTAC+AGG - Chr3:50997717-50997736 MsG0380014182.01.T01:intron 40.0%
! GTTTTCACCCACTGAAAGAT+TGG - Chr3:50997810-50997829 MsG0380014182.01.T01:intron 40.0%
! TACTCCTGTAGGCATACTTT+TGG + Chr3:50997724-50997743 None:intergenic 40.0%
! TGTGAGCTAGAAGATTTTGC+AGG + Chr3:51000768-51000787 None:intergenic 40.0%
! TGTGCCTCACAAGAATCTTT+TGG - Chr3:50998955-50998974 MsG0380014182.01.T01:intron 40.0%
! TTATCTGGCAGAGTATCAAC+GGG + Chr3:51000289-51000308 None:intergenic 40.0%
! TTTGGAACATTGCTTCCAAC+AGG - Chr3:50999533-50999552 MsG0380014182.01.T01:intron 40.0%
!! AAAGATCTGCCACTGATTCA+TGG + Chr3:50998280-50998299 None:intergenic 40.0%
!! AACACTTCTGAAGCTTGTCA+AGG + Chr3:50996751-50996770 None:intergenic 40.0%
!! AAGATCTGCCACTGATTCAT+GGG + Chr3:50998279-50998298 None:intergenic 40.0%
!! AATGTTGATGGTACTGTGGA+GGG - Chr3:50999050-50999069 MsG0380014182.01.T01:CDS 40.0%
!! ACCTAGCTTTGCAACTATGA+AGG - Chr3:51000796-51000815 MsG0380014182.01.T01:five_prime_UTR 40.0%
!! AGATGGGGAATTTGCTGATT+GGG + Chr3:50999856-50999875 None:intergenic 40.0%
!! CTCCACTTTGTTTCTGTTTC+AGG - Chr3:50996472-50996491 MsG0380014182.01.T01:CDS 40.0%
!! TAGATGGGGAATTTGCTGAT+TGG + Chr3:50999857-50999876 None:intergenic 40.0%
!! TTATCAGACTGACTTGTGAG+TGG - Chr3:50998635-50998654 MsG0380014182.01.T01:intron 40.0%
!! TTGCGTTTGGTTCTTGTTTC+TGG - Chr3:50998169-50998188 MsG0380014182.01.T01:intron 40.0%
!! TTGGTTGTTTTGCGATGGAT+TGG - Chr3:50997165-50997184 MsG0380014182.01.T01:intron 40.0%
!! TTTTGCCTTGATTGACTTCG+AGG + Chr3:51000690-51000709 None:intergenic 40.0%
AAATTTGGTCGTGGATGGGT+TGG - Chr3:50999583-50999602 MsG0380014182.01.T01:intron 45.0%
AAGAGAAGATCACGCGGTAA+TGG - Chr3:50995740-50995759 MsG0380014182.01.T01:intron 45.0%
AAGTGCCTGTTGAATCCTGT+TGG + Chr3:50999551-50999570 None:intergenic 45.0%
ACAGTACCATCAACATTGCC+TGG + Chr3:50999047-50999066 None:intergenic 45.0%
ACCAATGGTACTGCATACGA+AGG - Chr3:50999778-50999797 MsG0380014182.01.T01:intron 45.0%
ACCTTAACCCATGAAGTGGA+AGG - Chr3:50997866-50997885 MsG0380014182.01.T01:intron 45.0%
ACGAGCCAAACTCCTAGTAT+AGG + Chr3:50999488-50999507 None:intergenic 45.0%
ACTTGGCTGTACATCTCCAT+AGG + Chr3:50998992-50999011 None:intergenic 45.0%
AGACCTCAACCTATTCACAC+AGG - Chr3:51000564-51000583 MsG0380014182.01.T01:five_prime_UTR 45.0%
AGCTTGAATAGACGGTTGAC+TGG - Chr3:51000118-51000137 MsG0380014182.01.T01:intron 45.0%
ATATGGTCTCCAAGATGGGA+AGG - Chr3:50999232-50999251 MsG0380014182.01.T01:CDS 45.0%
ATTGAGGGGATACCATAGGT+TGG + Chr3:51000612-51000631 None:intergenic 45.0%
CAATCAATATTCGTCAGGCC+AGG + Chr3:51000729-51000748 None:intergenic 45.0%
CAGACACCAAGCAAGTATCA+TGG + Chr3:50997498-50997517 None:intergenic 45.0%
CATAGTTGCAAAGCTAGGTC+TGG + Chr3:51000795-51000814 None:intergenic 45.0%
CATTTCAAATGCAGTCCCCT+TGG - Chr3:51000652-51000671 MsG0380014182.01.T01:five_prime_UTR 45.0%
CCAACCCCGATATTTATGCT+TGG - Chr3:50999622-50999641 MsG0380014182.01.T01:intron 45.0%
CCAAGCATAAATATCGGGGT+TGG + Chr3:50999625-50999644 None:intergenic 45.0%
CGACCAAATTTACAGTCAGC+AGG + Chr3:50999574-50999593 None:intergenic 45.0%
CGTGCCTGAAGCAAATATAG+CGG + Chr3:50998799-50998818 None:intergenic 45.0%
CTGATGACTCAGCACTGTAT+GGG - Chr3:50996856-50996875 MsG0380014182.01.T01:intron 45.0%
CTTTGTCCAGATTGAGCTGA+TGG + Chr3:51000313-51000332 None:intergenic 45.0%
GAAGAAAGGAAGGCCATCAA+AGG - Chr3:50995505-50995524 MsG0380014182.01.T01:CDS 45.0%
GATTCTTGTGAGGCACAACT+CGG + Chr3:50998952-50998971 None:intergenic 45.0%
GCTGACTGTAAATTTGGTCG+TGG - Chr3:50999574-50999593 MsG0380014182.01.T01:intron 45.0%
GGAAGAACGAGAGGAAGAAT+TGG - Chr3:50995715-50995734 MsG0380014182.01.T01:intron 45.0%
GGCTGCTTGAAAGTTGTAGA+TGG + Chr3:51000043-51000062 None:intergenic 45.0%
GGGCAGCAAAGGGAATAATT+AGG + Chr3:50997622-50997641 None:intergenic 45.0%
GGTTAGAAGCAAGCAACAAG+AGG + Chr3:50997549-50997568 None:intergenic 45.0%
GGTTTGAATGATTGGCAGGA+AGG - Chr3:50996877-50996896 MsG0380014182.01.T01:intron 45.0%
GTGAGGAAGAAGTTGGCAAA+TGG - Chr3:50997072-50997091 MsG0380014182.01.T01:CDS 45.0%
GTTAGCGGAGAATTGTCTGA+CGG - Chr3:51000079-51000098 MsG0380014182.01.T01:intron 45.0%
TATACCTCACGTTCTTGCGA+CGG + Chr3:50995600-50995619 None:intergenic 45.0%
TCAGTCCTCGAAGTCAATCA+AGG - Chr3:51000682-51000701 MsG0380014182.01.T01:five_prime_UTR 45.0%
TCCTTCGTATGCAGTACCAT+TGG + Chr3:50999782-50999801 None:intergenic 45.0%
TCGCTAAGAGGAAGAAAGGA+AGG - Chr3:50995495-50995514 MsG0380014182.01.T01:CDS 45.0%
TCGTATGCAGTACCATTGGT+AGG + Chr3:50999778-50999797 None:intergenic 45.0%
TCTGATGACTCAGCACTGTA+TGG - Chr3:50996855-50996874 MsG0380014182.01.T01:intron 45.0%
TGATGTGATTGAGCATCCCA+TGG - Chr3:50997038-50997057 MsG0380014182.01.T01:intron 45.0%
TGCTTCCAACAGGATTCAAC+AGG - Chr3:50999543-50999562 MsG0380014182.01.T01:intron 45.0%
TGGTTGGGGAAACTGTGAAA+CGG + Chr3:51000592-51000611 None:intergenic 45.0%
TGTCTGTGGTATACAGTCTC+CGG + Chr3:50998719-50998738 None:intergenic 45.0%
TGTGATTGAGGGGATACCAT+AGG + Chr3:51000616-51000635 None:intergenic 45.0%
TTCATAGGTGGTTACTCAGG+CGG - Chr3:50998202-50998221 MsG0380014182.01.T01:intron 45.0%
! AAGGTGAGAAACGTTGGTAG+CGG - Chr3:50996099-50996118 MsG0380014182.01.T01:CDS 45.0%
! AGGACACGTATGGTGTTTTG+CGG - Chr3:50996897-50996916 MsG0380014182.01.T01:intron 45.0%
! CTTTTGCAACCCACTTGAGT+TGG - Chr3:50996976-50996995 MsG0380014182.01.T01:intron 45.0%
! GGGGACTGCATTTGAAATGT+AGG + Chr3:51000651-51000670 None:intergenic 45.0%
! GTGTGAATAGGTTGAGGTCT+AGG + Chr3:51000564-51000583 None:intergenic 45.0%
! TCCTTCCACTTCATGGGTTA+AGG + Chr3:50997870-50997889 None:intergenic 45.0%
! TCTGGCTTCCTGTTCTTCAT+AGG - Chr3:50998187-50998206 MsG0380014182.01.T01:intron 45.0%
!! AGGCAATGTTGATGGTACTG+TGG - Chr3:50999046-50999065 MsG0380014182.01.T01:intron 45.0%
!! ATGTTGATGGTACTGTGGAG+GGG - Chr3:50999051-50999070 MsG0380014182.01.T01:CDS 45.0%
!! CAACTCAAGTGGGTTGCAAA+AGG + Chr3:50996978-50996997 None:intergenic 45.0%
!! CAATGTTGATGGTACTGTGG+AGG - Chr3:50999049-50999068 MsG0380014182.01.T01:CDS 45.0%
!! CATCTCTAGGACCTGTTGTT+TGG - Chr3:50999515-50999534 MsG0380014182.01.T01:intron 45.0%
!! GATGGGGAATTTGCTGATTG+GGG + Chr3:50999855-50999874 None:intergenic 45.0%
!! GCTCGTTTTAGTGCATCTCT+AGG - Chr3:50999502-50999521 MsG0380014182.01.T01:intron 45.0%
!!! GTTGTTTTGCGATGGATTGG+TGG - Chr3:50997168-50997187 MsG0380014182.01.T01:intron 45.0%
AACACCAGCCAATATCGCAC+GGG - Chr3:50996690-50996709 MsG0380014182.01.T01:intron 50.0%
AACGGAATCCCGTGCGATAT+TGG + Chr3:50996701-50996720 None:intergenic 50.0%
AAGCAAGTATCATGGGCCGT+AGG + Chr3:50997490-50997509 None:intergenic 50.0%
ACATGGTTCAGGTCGCTAAG+AGG - Chr3:50995483-50995502 MsG0380014182.01.T01:CDS 50.0%
AGAAGAGGCTCAAAAGCCAC+AGG - Chr3:51000249-51000268 MsG0380014182.01.T01:intron 50.0%
AGCAAGTATCATGGGCCGTA+GGG + Chr3:50997489-50997508 None:intergenic 50.0%
AGCTACACCTTGCATCGGAT+AGG + Chr3:50999016-50999035 None:intergenic 50.0%
ATGCAAGGTGTAGCTGTGAG+AGG - Chr3:50999021-50999040 MsG0380014182.01.T01:intron 50.0%
ATTGGCAGGAAGGACACGTA+TGG - Chr3:50996887-50996906 MsG0380014182.01.T01:intron 50.0%
CAGGTCGCTAAGAGGAAGAA+AGG - Chr3:50995491-50995510 MsG0380014182.01.T01:CDS 50.0%
CAGTTTCCCCAACCAACCTA+TGG - Chr3:51000597-51000616 MsG0380014182.01.T01:five_prime_UTR 50.0%
CCAAGTTCCTATCCGATGCA+AGG - Chr3:50999006-50999025 MsG0380014182.01.T01:intron 50.0%
CCAGACTTTGCAACCAGACT+GGG + Chr3:50999956-50999975 None:intergenic 50.0%
CCTTGCATCGGATAGGAACT+TGG + Chr3:50999009-50999028 None:intergenic 50.0%
CTCACAGCTACACCTTGCAT+CGG + Chr3:50999021-50999040 None:intergenic 50.0%
CTCACCGTGGCAAAATCCAT+GGG + Chr3:50997057-50997076 None:intergenic 50.0%
GAAACGGCACCTGTGTGAAT+AGG + Chr3:51000576-51000595 None:intergenic 50.0%
GAAAGGAAGGCCATCAAAGG+CGG - Chr3:50995508-50995527 MsG0380014182.01.T01:CDS 50.0%
GAACACCAGCCAATATCGCA+CGG - Chr3:50996689-50996708 MsG0380014182.01.T01:intron 50.0%
GCACCTGTGTGAATAGGTTG+AGG + Chr3:51000570-51000589 None:intergenic 50.0%
GGAGACTGTATACCACAGAC+AGG - Chr3:50998718-50998737 MsG0380014182.01.T01:intron 50.0%
GGAGCAGGAGGGTTTAATCT+AGG - Chr3:51000385-51000404 MsG0380014182.01.T01:CDS 50.0%
GGAGGGTAGGAAGAAGGAAA+TGG + Chr3:50997570-50997589 None:intergenic 50.0%
GGCATGCTACTGATAGGAAC+AGG - Chr3:50997370-50997389 MsG0380014182.01.T01:intron 50.0%
GGCTTCCTGTTCTTCATAGG+TGG - Chr3:50998190-50998209 MsG0380014182.01.T01:intron 50.0%
TACGGCCCATGATACTTGCT+TGG - Chr3:50997489-50997508 MsG0380014182.01.T01:intron 50.0%
TATCCCCTCAATCACAACCG+CGG - Chr3:51000620-51000639 MsG0380014182.01.T01:five_prime_UTR 50.0%
TCAATATTCGTCAGGCCAGG+CGG + Chr3:51000726-51000745 None:intergenic 50.0%
TCCAGACTTTGCAACCAGAC+TGG + Chr3:50999957-50999976 None:intergenic 50.0%
TCGAGCTTCATACCTGTCTG+TGG + Chr3:50998733-50998752 None:intergenic 50.0%
TCTGGACAAAGAGATACCCC+AGG - Chr3:51000322-51000341 MsG0380014182.01.T01:CDS 50.0%
TTCCTAGGCGCACTCTCTTT+GGG + Chr3:51000007-51000026 None:intergenic 50.0%
! GAAGATTTTGCAGGTGACCC+TGG + Chr3:51000759-51000778 None:intergenic 50.0%
! GCATCCCATGGATTTTGCCA+CGG - Chr3:50997050-50997069 MsG0380014182.01.T01:CDS 50.0%
!! ACAGCTCCTTTTGTTTCCCG+TGG - Chr3:51000178-51000197 MsG0380014182.01.T01:intron 50.0%
!! AGGGGATACCATAGGTTGGT+TGG + Chr3:51000608-51000627 None:intergenic 50.0%
!! CAGCTCCTTTTGTTTCCCGT+GGG - Chr3:51000179-51000198 MsG0380014182.01.T01:intron 50.0%
!! GGGATACCATAGGTTGGTTG+GGG + Chr3:51000606-51000625 None:intergenic 50.0%
!! GGGGATACCATAGGTTGGTT+GGG + Chr3:51000607-51000626 None:intergenic 50.0%
ACACACCTCTTCCGGATCAC+CGG + Chr3:50996925-50996944 None:intergenic 55.0%
ACGGGATTCCGTTGCCTGAT+AGG - Chr3:50996708-50996727 MsG0380014182.01.T01:intron 55.0%
AGGACTGAGACCTCTCCAAG+GGG + Chr3:51000670-51000689 None:intergenic 55.0%
ATCCCCTCAATCACAACCGC+GGG - Chr3:51000621-51000640 MsG0380014182.01.T01:five_prime_UTR 55.0%
CAAATGCAGTCCCCTTGGAG+AGG - Chr3:51000657-51000676 MsG0380014182.01.T01:five_prime_UTR 55.0%
CAACGGAATCCGATTCACGG+CGG - Chr3:50995569-50995588 MsG0380014182.01.T01:CDS 55.0%
CCCAGTCTGGTTGCAAAGTC+TGG - Chr3:50999953-50999972 MsG0380014182.01.T01:intron 55.0%
CCGCAACGGAATCCGATTCA+CGG - Chr3:50995566-50995585 MsG0380014182.01.T01:CDS 55.0%
CCGTGAATCGGATTCCGTTG+CGG + Chr3:50995569-50995588 None:intergenic 55.0%
CCTCACCGTGGCAAAATCCA+TGG + Chr3:50997058-50997077 None:intergenic 55.0%
CGAGCTAGATCCGCCTTTGA+TGG + Chr3:50995521-50995540 None:intergenic 55.0%
GAATCCCGTGCGATATTGGC+TGG + Chr3:50996697-50996716 None:intergenic 55.0%
GAGAGGCCAGGCAATGTTGA+TGG - Chr3:50999038-50999057 MsG0380014182.01.T01:intron 55.0%
GAGGACTGAGACCTCTCCAA+GGG + Chr3:51000671-51000690 None:intergenic 55.0%
GCTCAGGTATGGATGTCTGC+AGG - Chr3:51000364-51000383 MsG0380014182.01.T01:CDS 55.0%
GTATGGATGTCTGCAGGAGC+AGG - Chr3:51000370-51000389 MsG0380014182.01.T01:CDS 55.0%
GTTCCTAGGCGCACTCTCTT+TGG + Chr3:51000008-51000027 None:intergenic 55.0%
TACCCCAGGCAATGCTTCAG+TGG - Chr3:51000336-51000355 MsG0380014182.01.T01:CDS 55.0%
TCCTACCCTCCTTGCCATGT+AGG - Chr3:50997579-50997598 MsG0380014182.01.T01:intron 55.0%
TCCTGCCCACGGGAAACAAA+AGG + Chr3:51000187-51000206 None:intergenic 55.0%
TCTTGTGAGGCACAACTCGG+TGG + Chr3:50998949-50998968 None:intergenic 55.0%
TGAATCGGATTCCGTTGCGG+CGG + Chr3:50995566-50995585 None:intergenic 55.0%
TGCCAACTTCTTCCTCACCG+TGG + Chr3:50997070-50997089 None:intergenic 55.0%
TGCCACGGTGAGGAAGAAGT+TGG - Chr3:50997065-50997084 MsG0380014182.01.T01:CDS 55.0%
TGGCAAGGAGGGTAGGAAGA+AGG + Chr3:50997576-50997595 None:intergenic 55.0%
TTGAAATGTAGGTCGGCCCG+CGG + Chr3:51000640-51000659 None:intergenic 55.0%
TTGTCACAGCCTCGCCTACA+TGG + Chr3:50997596-50997615 None:intergenic 55.0%
! ATCCCAAAGAGAGTGCGCCT+AGG - Chr3:51000002-51000021 MsG0380014182.01.T01:intron 55.0%
! CCATGGATTTTGCCACGGTG+AGG - Chr3:50997055-50997074 MsG0380014182.01.T01:CDS 55.0%
! CGTATGGTGTTTTGCGGAGC+CGG - Chr3:50996903-50996922 MsG0380014182.01.T01:intron 55.0%
! TGCTGATTGGGGCTGTTGAG+AGG + Chr3:50999844-50999863 None:intergenic 55.0%
!! ATTGATGGCGAAGCTGCAGC+AGG - Chr3:50995694-50995713 MsG0380014182.01.T01:intron 55.0%
!! CTGCCACTGAAGCATTGCCT+GGG + Chr3:51000342-51000361 None:intergenic 55.0%
!! TCCTTTTGTTTCCCGTGGGC+AGG - Chr3:51000183-51000202 MsG0380014182.01.T01:intron 55.0%
!! TGCCACTGAAGCATTGCCTG+GGG + Chr3:51000341-51000360 None:intergenic 55.0%
AAACAGGGAACCCTTCCGCC+TGG - Chr3:51000708-51000727 MsG0380014182.01.T01:five_prime_UTR 60.0%
ACAGCCTCGCCTACATGGCA+AGG + Chr3:50997591-50997610 None:intergenic 60.0%
ACGGAGACTCCGCCGTGAAT+CGG + Chr3:50995581-50995600 None:intergenic 60.0%
AGGTGTAGCTGTGAGAGGCC+AGG - Chr3:50999026-50999045 MsG0380014182.01.T01:intron 60.0%
ATTCGTCAGGCCAGGCGGAA+GGG + Chr3:51000721-51000740 None:intergenic 60.0%
CAGTGGCAGCTGCTCAGGTA+TGG - Chr3:51000353-51000372 MsG0380014182.01.T01:CDS 60.0%
CCTCGCCTACATGGCAAGGA+GGG + Chr3:50997587-50997606 None:intergenic 60.0%
CGAGGACTGAGACCTCTCCA+AGG + Chr3:51000672-51000691 None:intergenic 60.0%
GCCTACATGGCAAGGAGGGT+AGG + Chr3:50997583-50997602 None:intergenic 60.0%
GCTGCAGCAGGAAGAACGAG+AGG - Chr3:50995706-50995725 MsG0380014182.01.T01:intron 60.0%
GGATGTCTGCAGGAGCAGGA+GGG - Chr3:51000374-51000393 MsG0380014182.01.T01:CDS 60.0%
GTCTCCGTCGCAAGAACGTG+AGG - Chr3:50995593-50995612 MsG0380014182.01.T01:CDS 60.0%
TATTCGTCAGGCCAGGCGGA+AGG + Chr3:51000722-51000741 None:intergenic 60.0%
TGCTTCAGTGGCAGCTGCTC+AGG - Chr3:51000348-51000367 MsG0380014182.01.T01:CDS 60.0%
TGGATGTCTGCAGGAGCAGG+AGG - Chr3:51000373-51000392 MsG0380014182.01.T01:CDS 60.0%
! GTTTTGCGGAGCCGGTGATC+CGG - Chr3:50996911-50996930 MsG0380014182.01.T01:intron 60.0%
!! GCTGCCACTGAAGCATTGCC+TGG + Chr3:51000343-51000362 None:intergenic 60.0%
ATCGGATTCCGTTGCGGCGG+CGG + Chr3:50995563-50995582 None:intergenic 65.0%
CCCTCCTTGCCATGTAGGCG+AGG - Chr3:50997584-50997603 MsG0380014182.01.T01:intron 65.0%
CGGCCCGCGGTTGTGATTGA+GGG + Chr3:51000627-51000646 None:intergenic 65.0%
GCCTCGCCTACATGGCAAGG+AGG + Chr3:50997588-50997607 None:intergenic 65.0%
GGCCCGCGGTTGTGATTGAG+GGG + Chr3:51000626-51000645 None:intergenic 65.0%
GTTTCCCGTGGGCAGGAGCA+GGG - Chr3:51000190-51000209 MsG0380014182.01.T01:intron 65.0%
TCGGCCCGCGGTTGTGATTG+AGG + Chr3:51000628-51000647 None:intergenic 65.0%
TGAGACCCTGCTCCTGCCCA+CGG + Chr3:51000198-51000217 None:intergenic 65.0%
TGTTTCCCGTGGGCAGGAGC+AGG - Chr3:51000189-51000208 MsG0380014182.01.T01:intron 65.0%
ATCTCAGGCCGCCGCCGCAA+CGG - Chr3:50995552-50995571 MsG0380014182.01.T01:CDS 70.0%
CGGAGCCGGTGATCCGGAAG+AGG - Chr3:50996917-50996936 MsG0380014182.01.T01:intron 70.0%
CTCGCCGCGTCGCTGATCTC+AGG - Chr3:50995537-50995556 MsG0380014182.01.T01:CDS 70.0%
GAGACCCTGCTCCTGCCCAC+GGG + Chr3:51000197-51000216 None:intergenic 70.0%
GCGGCCTGAGATCAGCGACG+CGG + Chr3:50995544-50995563 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 50995354 51000815 50995354 ID=MsG0380014182.01;Name=MsG0380014182.01
Chr3 mRNA 50995354 51000815 50995354 ID=MsG0380014182.01.T01;Parent=MsG0380014182.01;Name=MsG0380014182.01.T01;_AED=0.27;_eAED=0.28;_QI=405|0.22|0.4|0.9|1|1|10|0|574
Chr3 exon 50995354 50995638 50995354 ID=MsG0380014182.01.T01:exon:9302;Parent=MsG0380014182.01.T01
Chr3 exon 50995800 50996267 50995800 ID=MsG0380014182.01.T01:exon:9301;Parent=MsG0380014182.01.T01
Chr3 exon 50996344 50996706 50996344 ID=MsG0380014182.01.T01:exon:9300;Parent=MsG0380014182.01.T01
Chr3 exon 50997045 50997163 50997045 ID=MsG0380014182.01.T01:exon:9299;Parent=MsG0380014182.01.T01
Chr3 exon 50998764 50998822 50998764 ID=MsG0380014182.01.T01:exon:9298;Parent=MsG0380014182.01.T01
Chr3 exon 50999048 50999145 50999048 ID=MsG0380014182.01.T01:exon:9297;Parent=MsG0380014182.01.T01
Chr3 exon 50999212 50999301 50999212 ID=MsG0380014182.01.T01:exon:9296;Parent=MsG0380014182.01.T01
Chr3 exon 50999382 50999480 50999382 ID=MsG0380014182.01.T01:exon:9295;Parent=MsG0380014182.01.T01
Chr3 exon 50999676 50999727 50999676 ID=MsG0380014182.01.T01:exon:9294;Parent=MsG0380014182.01.T01
Chr3 exon 51000319 51000815 51000319 ID=MsG0380014182.01.T01:exon:9293;Parent=MsG0380014182.01.T01
Chr3 five_prime_UTR 51000411 51000815 51000411 ID=MsG0380014182.01.T01:five_prime_utr;Parent=MsG0380014182.01.T01
Chr3 CDS 51000319 51000410 51000319 ID=MsG0380014182.01.T01:cds;Parent=MsG0380014182.01.T01
Chr3 CDS 50999676 50999727 50999676 ID=MsG0380014182.01.T01:cds;Parent=MsG0380014182.01.T01
Chr3 CDS 50999382 50999480 50999382 ID=MsG0380014182.01.T01:cds;Parent=MsG0380014182.01.T01
Chr3 CDS 50999212 50999301 50999212 ID=MsG0380014182.01.T01:cds;Parent=MsG0380014182.01.T01
Chr3 CDS 50999048 50999145 50999048 ID=MsG0380014182.01.T01:cds;Parent=MsG0380014182.01.T01
Chr3 CDS 50998764 50998822 50998764 ID=MsG0380014182.01.T01:cds;Parent=MsG0380014182.01.T01
Chr3 CDS 50997045 50997163 50997045 ID=MsG0380014182.01.T01:cds;Parent=MsG0380014182.01.T01
Chr3 CDS 50996344 50996706 50996344 ID=MsG0380014182.01.T01:cds;Parent=MsG0380014182.01.T01
Chr3 CDS 50995800 50996267 50995800 ID=MsG0380014182.01.T01:cds;Parent=MsG0380014182.01.T01
Chr3 CDS 50995354 50995638 50995354 ID=MsG0380014182.01.T01:cds;Parent=MsG0380014182.01.T01
Gene Sequence

>MsG0380014182.01.T01

ATGGAAGAAGATGAAGAAGAGATTGGTGAAATTGAAGGTGGAGAAGAAAATGAAGACGTAGAAGAAAAGTTGAAGCTGAAGAAGATAGTGCGATATAAGGGTACAAAGTTGATTCAAAAGGGCTCCACTTTGTTTCTGTTTCAGGAACACCAGCCAATATCGCACGGGATTCCGTTGCCTGATAGGAAGATTTTGGAAGTGATCCTTGACAAGCTTCAGAAGTGTTTTATTTTACATTTTGCACACTGTATGGGTTTGAATGATTGGCAGGAAGGACACGTATGGTGTTTTGCGGAGCCGGTGATCCGGAAGAGGTGTGTAGAATTTTCTAATCTTCCTGATTATCATGATGTGATTGAGCATCCCATGGATTTTGCCACGGTGAGGAAGAAGTTGGCAAATGGAGCTTACCCTACATTAGAGCAACTTGGGATTTATGAATACATACTTAAATGGCATGCTACTGATAGGAACAGGAATTCAATCACAGCCAAGTTCCTATCCGATGCAAGGTGTAGCTGTGAGAGGCCAGGCAATGTTGATGGTACTGTGGAGGGGAATGCTTTCTTGATCGATGCAAATCAAGATAAAGCTGAGATGTTATGTCAGGTTGGCGTCCATGCTGAATATTCCTATACTAGGAGTTTGGCTCGTTTTAGTGCATCTCTAGGACCTGTTGTTTGGAACATTGCTTCCAACAGGATTCAACAGGCACTTCCTGCTGACTGTAAATTTGGTCGTGGATGGGTTGGAGAGTATGAACCGATTCCAACCCCGATATTTATGCTTGGTAATCATCTCCAGAAAGAAACTAGTTTGATTATGAAGTTGAATGGTGACACAAATGGTAAGGGTGTAGAACCCAATACTGAACATCCTGTAAATGGACAGAAGCTTGAGGGAAAACATTCTTCAGATTGTCCTACCAATGGTACTGCATACGAAGGAAATCCTTCTAATGGTTTTAATGGAAGCTTGAAAAAAGTGGAGCTAAAGTCTTTACCCTCTAGTAATCAAAATAATCCCAGTCTGGTTGCAAAGTCTGGAAGTAGTACTCCTACAGCAGAGTTTAATCCCAAAGAGAGTGCGCCTAGGAACTTGAATTCTTTGCCATCTACAACTTTCAAGCAGCCAGATACAAATGAAGTTGTTAGCGGAGAATTGTCTGACGGAAAAGTCACGAATACAAGCTTGAATAGACGGTTGACTGGTCCATCATCTGAGAGTACAACAAACCAAACAATCAGAACAGCTCCTTTTGTTTCCCGTGGGCAGGAGCAGGGTCTCAGTGAACCACTTCAGTCCATGAGAATGTTCACAGAAGAGGCTCAAAAGCCACAGGCTTCTAATTATTCACCCGTTGATACTCTGCCAGATAAACCATCAGCTCAATCTGGACAAAGAGATACCCCAGGCAATGCTTCAGTGGCAGCTGCTCAGTCTAATAAGAACAATCTTCCATTTCATTCACCTAGACCTCAACCTATTCACACAGGTGCCGTTTCACAGTTTCCCCAACCAACCTATGGTATCCCCTCAATCACAACCGCGGGCCGACCTACATTTCAAATGCAGTCCCCTTGGAGAGGTCTCAGTCCTCGAAGTCAATCAAGGCAAAAACAGGGAACCCTTCCGCCTGGCCTGACGAATATTGATTGTCAATCTCCAGGGTCACCTGCAAAATCTTCTAGCTCACAGCAACCAGACCTAGCTTTGCAACTATGA
Protein sequence

>MsG0380014182.01.T01

MEEDEEEIGEIEGGEENEDVEEKLKLKKIVRYKGTKLIQKGSTLFLFQEHQPISHGIPLPDRKILEVILDKLQKCFILHFAHCMGLNDWQEGHVWCFAEPVIRKRCVEFSNLPDYHDVIEHPMDFATVRKKLANGAYPTLEQLGIYEYILKWHATDRNRNSITAKFLSDARCSCERPGNVDGTVEGNAFLIDANQDKAEMLCQVGVHAEYSYTRSLARFSASLGPVVWNIASNRIQQALPADCKFGRGWVGEYEPIPTPIFMLGNHLQKETSLIMKLNGDTNGKGVEPNTEHPVNGQKLEGKHSSDCPTNGTAYEGNPSNGFNGSLKKVELKSLPSSNQNNPSLVAKSGSSTPTAEFNPKESAPRNLNSLPSTTFKQPDTNEVVSGELSDGKVTNTSLNRRLTGPSSESTTNQTIRTAPFVSRGQEQGLSEPLQSMRMFTEEAQKPQASNYSPVDTLPDKPSAQSGQRDTPGNASVAAAQSNKNNLPFHSPRPQPIHTGAVSQFPQPTYGIPSITTAGRPTFQMQSPWRGLSPRSQSRQKQGTLPPGLTNIDCQSPGSPAKSSSSQQPDLALQL*