AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014798.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014798.01.T01 MTR_3g464530 94.172 326 19 0 1 326 1 326 0.0 623
MsG0380014798.01.T01 MTR_3g464530 93.254 252 17 0 1 252 1 252 5.47e-170 472
MsG0380014798.01.T01 MTR_2g083030 35.920 348 175 13 4 321 1 330 5.40e-58 190
MsG0380014798.01.T01 MTR_4g074130 33.815 346 188 9 4 321 2 334 1.61e-55 184
MsG0380014798.01.T01 MTR_5g005570 34.302 344 188 9 1 321 1 329 3.02e-55 183
MsG0380014798.01.T01 MTR_7g451860 36.991 319 160 13 27 321 35 336 6.07e-55 182
MsG0380014798.01.T01 MTR_7g047670 36.991 319 160 13 27 321 35 336 6.07e-55 182
MsG0380014798.01.T01 MTR_2g083000 33.918 342 185 11 4 321 1 325 5.94e-54 179
MsG0380014798.01.T01 MTR_4g015790 34.323 303 160 12 34 306 62 355 3.93e-45 158
MsG0380014798.01.T01 MTR_3g070860 34.641 306 146 11 34 302 50 338 4.37e-44 155
MsG0380014798.01.T01 MTR_7g068650 32.680 306 153 9 34 302 54 343 1.74e-43 153
MsG0380014798.01.T01 MTR_5g082750 33.770 305 168 9 25 302 40 337 8.95e-43 151
MsG0380014798.01.T01 MTR_8g024120 34.247 292 164 7 31 301 39 323 5.31e-42 149
MsG0380014798.01.T01 MTR_4g087120 31.847 314 155 10 34 301 26 326 4.13e-40 144
MsG0380014798.01.T01 MTR_4g087110 31.410 312 159 11 34 301 26 326 5.66e-40 144
MsG0380014798.01.T01 MTR_8g009110 30.994 342 191 13 9 322 40 364 1.63e-39 143
MsG0380014798.01.T01 MTR_8g009160 33.077 260 151 7 34 279 60 310 5.03e-39 141
MsG0380014798.01.T01 MTR_4g087140 31.056 322 168 13 24 301 16 327 1.28e-38 140
MsG0380014798.01.T01 MTR_3g083370 33.210 271 154 8 32 288 2 259 1.66e-38 139
MsG0380014798.01.T01 MTR_4g087100 30.556 324 168 13 30 308 22 333 3.60e-38 139
MsG0380014798.01.T01 MTR_2g025120 31.618 272 153 8 34 288 4 259 9.16e-38 137
MsG0380014798.01.T01 MTR_1g034120 30.241 291 159 10 45 303 52 330 1.34e-37 137
MsG0380014798.01.T01 MTR_8g009170 32.168 286 165 10 9 279 40 311 3.94e-37 136
MsG0380014798.01.T01 MTR_8g008930 32.075 265 148 9 34 279 60 311 6.37e-37 136
MsG0380014798.01.T01 MTR_8g028435 33.077 260 151 7 34 279 60 310 7.53e-37 135
MsG0380014798.01.T01 MTR_5g055690 33.205 259 152 6 34 279 47 297 1.39e-36 135
MsG0380014798.01.T01 MTR_5g085330 31.186 295 163 9 34 301 5 286 1.42e-36 134
MsG0380014798.01.T01 MTR_1g034060 29.897 291 160 10 45 303 52 330 1.93e-36 134
MsG0380014798.01.T01 MTR_7g063730 29.373 303 180 7 21 301 55 345 2.34e-36 134
MsG0380014798.01.T01 MTR_4g117880 31.636 275 165 7 34 295 60 324 2.53e-36 134
MsG0380014798.01.T01 MTR_8g009090 30.405 296 171 9 34 303 60 346 2.56e-36 134
MsG0380014798.01.T01 MTR_1g033810 31.507 292 160 8 7 282 34 301 3.12e-36 134
MsG0380014798.01.T01 MTR_7g062570 29.630 270 172 4 31 289 52 314 3.28e-36 134
MsG0380014798.01.T01 MTR_3g092890 28.475 295 187 5 28 304 32 320 8.43e-36 132
MsG0380014798.01.T01 MTR_2g069190 33.460 263 145 9 34 279 68 317 1.21e-35 132
MsG0380014798.01.T01 MTR_5g048550 30.690 290 173 8 18 288 25 305 4.52e-35 130
MsG0380014798.01.T01 MTR_4g087090 30.189 318 170 11 31 308 27 332 5.35e-35 130
MsG0380014798.01.T01 MTR_2g069090 30.537 298 172 9 34 305 68 356 9.44e-35 130
MsG0380014798.01.T01 MTR_2g069300 29.348 276 169 7 34 295 54 317 1.11e-34 130
MsG0380014798.01.T01 MTR_5g048570 30.970 268 163 6 34 288 45 303 1.27e-34 129
MsG0380014798.01.T01 MTR_3g072810 32.407 324 183 11 2 302 12 322 1.40e-34 129
MsG0380014798.01.T01 MTR_8g064200 29.730 259 161 6 34 279 52 302 2.10e-34 129
MsG0380014798.01.T01 MTR_1g034140 31.699 306 165 11 32 303 25 320 2.17e-34 129
MsG0380014798.01.T01 MTR_0328s0030 31.679 262 157 6 34 282 45 297 2.86e-34 129
MsG0380014798.01.T01 MTR_8g064200 29.730 259 161 6 34 279 57 307 3.74e-34 128
MsG0380014798.01.T01 MTR_0009s0050 30.597 268 164 6 34 288 47 305 4.68e-34 128
MsG0380014798.01.T01 MTR_0009s0050 30.597 268 164 6 34 288 47 305 5.41e-34 128
MsG0380014798.01.T01 MTR_5g048850 30.268 261 156 6 34 279 47 296 1.20e-33 127
MsG0380014798.01.T01 MTR_5g055820 31.418 261 154 8 34 279 47 297 1.40e-33 127
MsG0380014798.01.T01 MTR_5g048470 29.885 261 158 8 34 279 53 303 1.65e-33 127
MsG0380014798.01.T01 MTR_7g062580 28.261 276 168 6 31 289 52 314 1.98e-33 126
MsG0380014798.01.T01 MTR_0009s0480 29.771 262 162 6 34 282 46 298 2.23e-33 126
MsG0380014798.01.T01 MTR_5g055800 32.075 265 152 7 34 282 47 299 4.82e-33 125
MsG0380014798.01.T01 MTR_5g055900 29.963 267 167 6 34 288 47 305 1.88e-32 124
MsG0380014798.01.T01 MTR_5g055680 28.713 303 185 8 9 288 11 305 1.88e-32 124
MsG0380014798.01.T01 MTR_5g048740 31.179 263 158 8 31 279 42 295 2.62e-32 123
MsG0380014798.01.T01 MTR_2g070870 28.155 309 184 12 19 302 11 306 1.00e-31 121
MsG0380014798.01.T01 MTR_2g102570 31.034 290 170 11 34 301 52 333 1.53e-31 122
MsG0380014798.01.T01 MTR_3g088565 29.924 264 158 7 34 282 3 254 1.68e-31 120
MsG0380014798.01.T01 MTR_2g069210 28.571 273 170 7 47 303 86 349 2.03e-31 121
MsG0380014798.01.T01 MTR_8g062600 30.258 271 156 9 34 286 67 322 9.86e-31 119
MsG0380014798.01.T01 MTR_1g043760 30.175 285 161 10 18 279 32 301 1.38e-30 119
MsG0380014798.01.T01 MTR_2g072910 30.515 272 157 7 25 279 46 302 2.12e-30 118
MsG0380014798.01.T01 MTR_8g009080 29.752 242 150 7 45 279 114 342 2.43e-30 119
MsG0380014798.01.T01 MTR_2g072890 28.146 302 189 8 2 288 24 312 3.05e-30 118
MsG0380014798.01.T01 MTR_4g087130 28.662 314 172 9 30 301 22 325 3.42e-30 118
MsG0380014798.01.T01 MTR_3g091350 30.282 284 162 9 25 285 46 316 3.73e-30 117
MsG0380014798.01.T01 MTR_5g055690 32.203 236 139 6 34 256 47 274 3.82e-30 115
MsG0380014798.01.T01 MTR_5g025050 29.139 302 184 10 31 315 2 290 3.94e-30 116
MsG0380014798.01.T01 MTR_1g093110 28.286 350 186 14 18 322 44 373 4.52e-30 117
MsG0380014798.01.T01 MTR_8g009170 30.597 268 158 9 9 262 40 293 4.53e-30 116
MsG0380014798.01.T01 MTR_2g437380 26.073 303 182 10 29 301 46 336 6.07e-30 117
MsG0380014798.01.T01 MTR_3g091360 30.450 289 167 10 19 285 33 309 7.79e-30 117
MsG0380014798.01.T01 MTR_8g461330 29.180 305 169 13 31 302 24 314 9.44e-30 116
MsG0380014798.01.T01 MTR_4g024660 30.496 282 160 10 34 295 67 332 1.06e-29 117
MsG0380014798.01.T01 MTR_7g062550 27.037 270 179 4 31 289 57 319 1.20e-29 116
MsG0380014798.01.T01 MTR_5g059140 31.136 273 147 9 34 282 42 297 2.31e-29 115
MsG0380014798.01.T01 MTR_7g062600 25.249 301 202 6 1 289 22 311 5.90e-29 114
MsG0380014798.01.T01 MTR_5g059130 31.111 270 149 9 34 282 44 297 6.48e-29 114
MsG0380014798.01.T01 MTR_6g015950 27.055 292 190 6 31 304 36 322 7.18e-29 114
MsG0380014798.01.T01 MTR_1g081840 27.273 308 189 9 8 289 24 322 9.31e-29 114
MsG0380014798.01.T01 MTR_5g025090 27.778 288 179 8 32 302 3 278 1.32e-28 112
MsG0380014798.01.T01 MTR_3g072820 28.070 285 182 8 10 282 22 295 1.39e-28 113
MsG0380014798.01.T01 MTR_3g088745 28.956 297 176 13 18 288 17 304 2.12e-28 113
MsG0380014798.01.T01 MTR_4g093840 30.104 289 164 10 25 289 49 323 2.47e-28 113
MsG0380014798.01.T01 MTR_8g063070 28.030 264 157 8 34 279 67 315 5.84e-28 112
MsG0380014798.01.T01 MTR_8g041620 29.832 238 146 7 50 279 95 319 7.02e-28 112
MsG0380014798.01.T01 MTR_2g068950 26.882 279 137 8 34 277 63 309 1.13e-27 111
MsG0380014798.01.T01 MTR_2g069060 28.516 256 162 6 34 277 49 295 1.20e-27 110
MsG0380014798.01.T01 MTR_7g062560 27.389 314 190 8 11 305 43 337 1.49e-27 110
MsG0380014798.01.T01 MTR_5g027230 26.298 289 184 7 31 302 3 279 1.75e-27 109
MsG0380014798.01.T01 MTR_1g070120 26.646 319 196 11 7 304 21 322 2.13e-27 110
MsG0380014798.01.T01 MTR_5g048850 29.787 235 139 6 34 253 47 270 3.11e-27 108
MsG0380014798.01.T01 MTR_3g117420 28.464 267 162 7 34 282 52 307 5.36e-27 109
MsG0380014798.01.T01 MTR_2g019370 28.197 305 171 12 34 305 28 317 7.99e-27 108
MsG0380014798.01.T01 MTR_1g093140 28.148 270 166 9 34 287 73 330 1.09e-26 108
MsG0380014798.01.T01 MTR_2g068960 26.690 281 139 8 34 279 63 311 1.59e-26 108
MsG0380014798.01.T01 MTR_1g070135 24.458 323 198 11 7 304 21 322 2.99e-26 107
MsG0380014798.01.T01 MTR_3g063180 27.358 318 189 13 18 301 23 332 3.07e-26 107
MsG0380014798.01.T01 MTR_8g041600 28.745 247 147 7 45 279 90 319 3.12e-26 107
MsG0380014798.01.T01 MTR_4g116010 30.000 330 186 14 11 314 20 330 3.56e-26 107
MsG0380014798.01.T01 MTR_0009s0480 28.879 232 143 6 34 252 46 268 4.25e-26 105
MsG0380014798.01.T01 MTR_7g045650 27.237 257 157 6 25 264 51 294 4.49e-26 106
MsG0380014798.01.T01 MTR_3g083370 30.638 235 136 8 32 252 2 223 4.77e-26 103
MsG0380014798.01.T01 MTR_6g464620 27.574 272 177 6 34 288 64 332 4.96e-26 107
MsG0380014798.01.T01 MTR_2g025120 30.093 216 125 7 47 252 24 223 5.76e-26 103
MsG0380014798.01.T01 MTR_1g011580 28.947 304 191 10 29 318 58 350 6.41e-26 106
MsG0380014798.01.T01 MTR_1g093120 27.203 261 163 8 34 279 67 315 6.66e-26 106
MsG0380014798.01.T01 MTR_1g102070 26.923 312 182 9 31 312 70 365 7.68e-26 106
MsG0380014798.01.T01 MTR_8g093930 23.653 334 207 9 11 307 20 342 1.03e-25 105
MsG0380014798.01.T01 MTR_7g077670 28.302 318 178 13 34 319 11 310 1.88e-25 104
MsG0380014798.01.T01 MTR_1g043775 30.370 270 152 11 30 279 50 303 4.45e-25 103
MsG0380014798.01.T01 MTR_8g074070 27.113 284 181 6 34 298 52 328 6.25e-25 103
MsG0380014798.01.T01 MTR_8g033380 26.531 294 182 9 34 301 54 339 6.54e-25 103
MsG0380014798.01.T01 MTR_5g032880 29.553 291 177 9 31 301 35 317 7.76e-25 105
MsG0380014798.01.T01 MTR_5g032880 27.564 312 170 8 32 305 374 667 4.23e-23 100
MsG0380014798.01.T01 MTR_7g029655 27.703 296 159 10 18 279 40 314 9.46e-25 103
MsG0380014798.01.T01 MTR_6g092620 28.676 272 163 8 34 288 3 260 1.04e-24 102
MsG0380014798.01.T01 MTR_1g043770 28.671 286 163 12 18 279 32 300 1.07e-24 102
MsG0380014798.01.T01 MTR_5g024940 26.481 287 167 7 31 302 3 260 1.64e-24 100
MsG0380014798.01.T01 MTR_8g009080 29.258 229 141 8 45 265 114 329 2.39e-24 101
MsG0380014798.01.T01 MTR_0032s0040 29.278 263 160 8 34 281 70 321 2.45e-24 102
MsG0380014798.01.T01 MTR_8g030880 28.797 316 180 12 34 319 10 310 2.77e-24 101
MsG0380014798.01.T01 MTR_2g069020 27.734 256 164 5 34 277 67 313 2.96e-24 102
MsG0380014798.01.T01 MTR_3g045230 28.623 276 176 9 23 288 47 311 3.35e-24 101
MsG0380014798.01.T01 MTR_8g009120 29.430 316 173 15 34 322 60 352 3.44e-24 101
MsG0380014798.01.T01 MTR_1g070080 25.342 292 190 8 34 304 38 322 3.73e-24 101
MsG0380014798.01.T01 MTR_2g069020 27.734 256 164 5 34 277 67 313 4.12e-24 101
MsG0380014798.01.T01 MTR_8g009150 27.099 262 152 7 34 283 60 294 4.95e-24 100
MsG0380014798.01.T01 MTR_5g065010 27.596 337 193 15 2 307 11 327 5.51e-24 100
MsG0380014798.01.T01 MTR_3g096500 24.709 344 209 12 10 312 38 372 6.06e-24 101
MsG0380014798.01.T01 MTR_3g040410 27.551 294 177 9 34 302 6 288 6.50e-24 100
MsG0380014798.01.T01 MTR_7g102720 26.715 277 175 8 27 288 29 292 9.58e-24 99.8
MsG0380014798.01.T01 MTR_7g056347 25.182 274 178 6 34 292 67 328 1.17e-23 100
MsG0380014798.01.T01 MTR_1g043810 28.819 288 163 12 18 279 32 303 1.19e-23 100
MsG0380014798.01.T01 MTR_7g016090 25.952 289 190 6 17 292 24 301 1.64e-23 99.4
MsG0380014798.01.T01 MTR_5g022020 26.059 307 189 12 31 309 36 332 1.65e-23 99.8
MsG0380014798.01.T01 MTR_7g016090 25.952 289 190 6 17 292 22 299 1.66e-23 99.4
MsG0380014798.01.T01 MTR_7g078010 29.553 291 151 11 34 295 67 332 1.72e-23 99.8
MsG0380014798.01.T01 MTR_8g469400 25.249 301 193 9 34 325 67 344 2.35e-23 99.4
MsG0380014798.01.T01 MTR_4g119410 28.986 276 172 8 34 295 67 332 2.46e-23 99.4
MsG0380014798.01.T01 MTR_8g074050 27.465 284 180 6 34 298 52 328 2.46e-23 99.0
MsG0380014798.01.T01 MTR_5g025060 25.333 300 171 9 32 315 4 266 3.11e-23 97.4
MsG0380014798.01.T01 MTR_1g062110 29.520 271 147 9 34 277 66 319 3.23e-23 99.0
MsG0380014798.01.T01 MTR_2g033270 25.987 304 167 12 34 302 19 299 4.23e-23 97.8
MsG0380014798.01.T01 MTR_1g070185 27.368 285 170 9 34 300 69 334 6.04e-23 98.2
MsG0380014798.01.T01 MTR_8g006930 27.875 287 161 9 34 295 67 332 6.53e-23 98.2
MsG0380014798.01.T01 MTR_2g072910 29.388 245 141 7 25 252 46 275 7.33e-23 96.3
MsG0380014798.01.T01 MTR_4g132770 43.689 103 55 1 190 289 28 130 1.02e-22 93.2
MsG0380014798.01.T01 MTR_3g058610 25.566 309 192 11 31 311 36 334 1.26e-22 97.1
MsG0380014798.01.T01 MTR_2g069010 25.769 260 168 7 34 279 69 317 1.30e-22 97.4
MsG0380014798.01.T01 MTR_4g123020 24.183 306 190 9 25 302 11 302 1.42e-22 96.3
MsG0380014798.01.T01 MTR_3g043900 26.333 300 187 10 23 301 47 333 1.48e-22 97.1
MsG0380014798.01.T01 MTR_2g069060 27.706 231 146 6 34 252 27 248 1.99e-22 94.7
MsG0380014798.01.T01 MTR_5g032870 27.941 272 176 6 32 288 36 302 2.08e-22 96.3
MsG0380014798.01.T01 MTR_0056s0160 32.824 131 85 1 152 279 51 181 5.41e-22 93.2
MsG0380014798.01.T01 MTR_8g074070 26.596 282 166 6 34 298 52 309 6.11e-22 94.7
MsG0380014798.01.T01 MTR_8g075890 25.228 329 203 13 10 310 20 333 7.67e-22 95.1
MsG0380014798.01.T01 MTR_4g096840 27.483 302 170 13 34 302 29 314 8.65e-22 94.4
MsG0380014798.01.T01 MTR_1g070085 24.333 300 190 8 34 307 37 325 8.67e-22 94.7
MsG0380014798.01.T01 MTR_1g070085 24.333 300 190 8 34 307 37 325 8.67e-22 94.7
MsG0380014798.01.T01 MTR_3g026150 26.000 300 181 9 31 301 54 341 1.32e-21 94.4
MsG0380014798.01.T01 MTR_8g009080 28.436 211 131 7 45 248 114 311 1.54e-21 94.0
MsG0380014798.01.T01 MTR_1g048940 25.000 300 186 9 18 292 25 310 1.70e-21 94.0
MsG0380014798.01.T01 MTR_7g102820 27.305 282 172 10 15 277 59 326 2.28e-21 94.0
MsG0380014798.01.T01 MTR_1g032140 28.137 263 164 9 34 283 66 316 4.80e-21 92.8
MsG0380014798.01.T01 MTR_0009s0050 32.867 143 93 1 149 288 65 207 6.55e-21 90.5
MsG0380014798.01.T01 MTR_0009s0050 32.867 143 93 1 149 288 65 207 7.23e-21 90.5
MsG0380014798.01.T01 MTR_7g016080 23.841 302 186 9 14 292 13 293 1.26e-20 91.3
MsG0380014798.01.T01 MTR_3g117485 24.723 271 187 5 43 302 68 332 2.28e-20 90.9
MsG0380014798.01.T01 MTR_7g056353 28.452 239 155 6 62 295 79 306 2.31e-20 92.0
MsG0380014798.01.T01 MTR_1g086550 26.524 328 185 16 34 323 20 329 2.35e-20 90.5
MsG0380014798.01.T01 MTR_8g075830 25.484 310 189 13 31 310 36 333 2.60e-20 90.9
MsG0380014798.01.T01 MTR_7g105070 27.863 262 162 9 34 280 59 308 3.55e-20 90.5
MsG0380014798.01.T01 MTR_2g437380 24.901 253 159 8 69 301 1 242 3.88e-20 88.6
MsG0380014798.01.T01 MTR_4g100600 29.787 282 159 12 34 289 9 277 7.16e-20 89.0
MsG0380014798.01.T01 MTR_7g081710 25.083 303 188 9 26 301 41 331 3.66e-19 87.4
MsG0380014798.01.T01 MTR_1g032220 25.526 333 199 13 18 314 49 368 6.63e-19 86.7
MsG0380014798.01.T01 MTR_1g043775 29.339 242 136 10 30 252 50 275 7.76e-19 85.9
MsG0380014798.01.T01 MTR_0009s0050 34.400 125 79 1 167 288 1 125 8.03e-19 83.2
MsG0380014798.01.T01 MTR_8g041600 27.103 214 128 6 50 252 95 291 1.22e-18 85.1
MsG0380014798.01.T01 MTR_3g117485 24.790 238 167 4 54 285 7 238 1.30e-18 84.7
MsG0380014798.01.T01 MTR_3g108520 26.518 313 163 11 34 301 7 297 2.17e-18 84.7
MsG0380014798.01.T01 MTR_5g011250 26.740 273 180 8 26 288 51 313 3.37e-18 84.7
MsG0380014798.01.T01 MTR_8g093980 22.455 334 212 9 10 307 31 353 3.84e-18 84.7
MsG0380014798.01.T01 MTR_8g009180 31.667 180 102 6 119 279 63 240 5.49e-18 83.2
MsG0380014798.01.T01 MTR_1g043770 27.799 259 146 12 18 252 32 273 1.08e-17 82.4
MsG0380014798.01.T01 MTR_7g056393 26.619 278 176 8 34 295 67 332 1.27e-17 83.2
MsG0380014798.01.T01 MTR_1g070135 23.695 249 165 8 16 252 25 260 1.49e-17 81.6
MsG0380014798.01.T01 MTR_1g043810 27.308 260 148 11 18 252 32 275 2.37e-17 81.6
MsG0380014798.01.T01 MTR_1g062110 27.642 246 134 9 34 252 66 294 6.62e-17 80.5
MsG0380014798.01.T01 MTR_1g032250 24.904 261 175 8 34 283 73 323 1.86e-16 79.7
MsG0380014798.01.T01 MTR_7g078010 27.935 247 125 10 34 252 67 288 2.86e-16 78.6
MsG0380014798.01.T01 MTR_1g070085 24.378 201 137 4 121 307 48 247 4.48e-16 77.4
MsG0380014798.01.T01 MTR_1g070110 36.975 119 61 3 206 314 110 224 5.73e-16 76.3
MsG0380014798.01.T01 MTR_1g043840 37.857 140 73 5 148 279 51 184 6.31e-16 77.8
MsG0380014798.01.T01 MTR_2g068840 25.092 271 173 8 30 282 54 312 7.65e-16 77.8
MsG0380014798.01.T01 MTR_2g068800 27.059 255 145 10 30 270 54 281 7.69e-16 77.0
MsG0380014798.01.T01 MTR_4g115990 24.324 296 181 8 33 311 45 314 9.05e-16 77.0
MsG0380014798.01.T01 MTR_0009s0400 38.043 92 54 1 194 282 4 95 1.35e-15 73.2
MsG0380014798.01.T01 MTR_1g070100 24.103 195 133 4 121 301 44 237 3.45e-15 74.7
MsG0380014798.01.T01 MTR_4g100590 26.619 278 168 12 34 289 9 272 2.16e-14 73.2
MsG0380014798.01.T01 MTR_3g026150 27.059 170 111 3 145 301 69 238 2.86e-14 72.0
MsG0380014798.01.T01 MTR_4g011720 26.059 307 175 10 29 301 4 292 3.96e-14 72.4
MsG0380014798.01.T01 MTR_4g011690 24.333 300 192 11 28 301 3 293 2.14e-13 70.1
MsG0380014798.01.T01 MTR_3g026150 25.311 241 149 7 31 252 54 282 5.24e-13 68.6
MsG0380014798.01.T01 MTR_6g035160 35.294 119 67 4 192 301 37 154 1.83e-12 65.5
MsG0380014798.01.T01 MTR_1g027290 24.823 282 168 12 47 300 52 317 2.06e-12 67.4
MsG0380014798.01.T01 MTR_3g040440 37.662 77 45 2 191 265 3 78 4.91e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014798.01.T01 AT5G58660 50.571 350 144 10 1 324 1 347 1.99e-109 323
MsG0380014798.01.T01 AT3G47190 45.345 333 170 8 1 324 1 330 3.33e-92 278
MsG0380014798.01.T01 AT5G58660 48.188 276 115 9 1 251 1 273 1.43e-75 234
MsG0380014798.01.T01 AT4G21200 35.556 315 166 10 27 321 36 333 6.35e-56 185
MsG0380014798.01.T01 AT1G50960 32.248 307 177 7 34 321 40 334 1.03e-47 164
MsG0380014798.01.T01 AT3G11180 33.673 294 161 11 34 302 95 379 2.33e-41 149
MsG0380014798.01.T01 AT5G05600 32.660 297 164 10 34 302 62 350 2.76e-41 147
MsG0380014798.01.T01 AT3G11180 32.899 307 171 12 34 314 95 392 3.31e-41 148
MsG0380014798.01.T01 AT4G10500 34.296 277 160 8 25 288 35 302 7.12e-41 146
MsG0380014798.01.T01 AT1G78550 32.130 277 164 6 31 292 50 317 4.77e-40 144
MsG0380014798.01.T01 AT4G10490 31.229 301 175 7 25 301 33 325 1.49e-38 140
MsG0380014798.01.T01 AT1G12010 29.655 290 169 8 34 301 7 283 1.17e-37 137
MsG0380014798.01.T01 AT2G38240 29.126 309 183 9 34 316 48 346 1.00e-36 135
MsG0380014798.01.T01 AT3G55970 31.579 342 177 13 9 315 32 351 1.87e-36 135
MsG0380014798.01.T01 AT1G05010 31.250 272 159 9 32 288 2 260 2.56e-35 130
MsG0380014798.01.T01 AT1G77330 30.405 296 165 11 34 301 3 285 6.04e-35 129
MsG0380014798.01.T01 AT1G62380 27.336 289 177 6 34 301 7 283 7.03e-35 129
MsG0380014798.01.T01 AT1G80330 31.579 304 173 11 23 301 40 333 9.57e-34 127
MsG0380014798.01.T01 AT3G19010 28.242 347 179 13 1 301 1 323 1.32e-33 127
MsG0380014798.01.T01 AT3G19010 28.242 347 179 13 1 301 1 323 1.32e-33 127
MsG0380014798.01.T01 AT5G24530 28.028 289 181 6 34 301 38 320 1.56e-33 126
MsG0380014798.01.T01 AT1G17020 32.197 264 151 8 34 279 53 306 2.43e-33 126
MsG0380014798.01.T01 AT1G17010 31.970 269 156 8 34 285 54 312 8.22e-33 125
MsG0380014798.01.T01 AT5G08640 29.110 292 174 9 34 301 43 325 2.03e-32 123
MsG0380014798.01.T01 AT5G08640 29.110 292 174 9 34 301 43 325 2.03e-32 123
MsG0380014798.01.T01 AT4G25420 26.879 346 202 10 8 312 31 366 2.43e-32 124
MsG0380014798.01.T01 AT1G15550 30.034 293 168 10 34 301 57 337 8.46e-32 122
MsG0380014798.01.T01 AT5G43440 28.231 294 168 8 24 295 52 324 1.80e-31 121
MsG0380014798.01.T01 AT3G19000 30.225 311 166 10 31 301 29 328 3.17e-31 120
MsG0380014798.01.T01 AT1G78550 30.453 243 153 5 57 292 6 239 4.04e-31 118
MsG0380014798.01.T01 AT5G43450 28.302 318 187 10 18 303 36 344 4.09e-31 120
MsG0380014798.01.T01 AT4G25310 32.129 249 141 8 43 279 69 301 1.36e-30 119
MsG0380014798.01.T01 AT5G20400 30.690 290 169 9 17 289 34 308 5.17e-30 117
MsG0380014798.01.T01 AT1G04350 28.571 280 174 7 18 279 34 305 6.64e-30 117
MsG0380014798.01.T01 AT4G25300 30.534 262 157 7 34 279 52 304 7.03e-30 117
MsG0380014798.01.T01 AT5G59540 27.517 298 174 9 34 301 61 346 1.74e-29 116
MsG0380014798.01.T01 AT5G59530 28.182 330 170 12 18 301 36 344 1.94e-29 116
MsG0380014798.01.T01 AT1G06620 29.474 285 176 9 8 279 39 311 2.42e-29 115
MsG0380014798.01.T01 AT1G49390 30.928 291 167 9 13 285 30 304 3.71e-29 115
MsG0380014798.01.T01 AT5G51810 28.065 310 184 10 34 312 63 364 3.80e-29 115
MsG0380014798.01.T01 AT5G54000 30.795 302 173 9 7 289 25 309 5.12e-29 114
MsG0380014798.01.T01 AT5G20550 31.752 274 160 8 34 289 45 309 1.12e-28 113
MsG0380014798.01.T01 AT1G55290 30.797 276 166 9 27 288 54 318 1.41e-28 113
MsG0380014798.01.T01 AT5G05600 32.203 236 134 9 34 251 62 289 3.47e-28 111
MsG0380014798.01.T01 AT2G34555 30.690 290 170 11 10 282 3 278 6.30e-28 111
MsG0380014798.01.T01 AT2G19590 29.603 277 165 9 27 288 4 265 6.63e-28 110
MsG0380014798.01.T01 AT4G16330 27.491 291 176 9 30 300 63 338 9.55e-28 111
MsG0380014798.01.T01 AT3G21420 27.206 272 175 5 34 289 55 319 1.01e-27 111
MsG0380014798.01.T01 AT3G19010 27.463 335 167 14 1 301 1 293 1.35e-27 110
MsG0380014798.01.T01 AT1G04380 28.616 318 177 12 18 301 24 325 1.38e-27 110
MsG0380014798.01.T01 AT5G63600 28.195 266 168 7 34 288 33 286 1.86e-27 110
MsG0380014798.01.T01 AT1G80340 29.963 267 168 8 34 289 50 308 3.27e-27 109
MsG0380014798.01.T01 AT4G23340 28.571 294 172 12 50 319 30 309 4.22e-27 108
MsG0380014798.01.T01 AT1G78440 28.571 322 177 13 34 323 18 318 2.60e-26 107
MsG0380014798.01.T01 AT5G63600 28.464 267 167 8 34 288 33 287 3.26e-26 106
MsG0380014798.01.T01 AT3G19000 29.615 260 142 8 31 260 29 277 4.56e-26 105
MsG0380014798.01.T01 AT1G06650 27.419 310 185 10 34 318 64 358 7.61e-26 106
MsG0380014798.01.T01 AT2G36690 29.078 282 160 9 34 292 61 325 9.98e-26 105
MsG0380014798.01.T01 AT2G36690 29.078 282 160 9 34 292 61 325 9.98e-26 105
MsG0380014798.01.T01 AT3G13610 28.671 286 179 9 17 288 44 318 1.81e-25 105
MsG0380014798.01.T01 AT5G63590 28.082 292 180 10 34 302 14 298 1.99e-25 103
MsG0380014798.01.T01 AT1G44090 26.437 348 207 10 1 310 27 363 2.12e-25 105
MsG0380014798.01.T01 AT1G03410 27.852 298 173 10 34 301 57 342 4.82e-25 103
MsG0380014798.01.T01 AT5G54000 31.667 240 143 7 60 289 1 229 4.99e-25 102
MsG0380014798.01.T01 AT1G06640 27.331 311 186 10 34 319 64 359 5.09e-25 103
MsG0380014798.01.T01 AT3G55970 30.249 281 148 12 2 252 20 282 1.11e-24 102
MsG0380014798.01.T01 AT1G03410 27.852 298 173 10 34 301 94 379 1.12e-24 103
MsG0380014798.01.T01 AT3G19010 27.835 291 150 12 1 255 1 267 1.45e-24 101
MsG0380014798.01.T01 AT1G30040 26.333 300 181 11 31 303 28 314 1.56e-24 102
MsG0380014798.01.T01 AT5G63595 28.417 278 162 7 21 288 12 262 2.32e-24 100
MsG0380014798.01.T01 AT1G14130 27.740 292 172 9 34 302 9 284 4.28e-24 100
MsG0380014798.01.T01 AT1G49390 30.638 235 144 6 60 285 1 225 4.47e-24 99.8
MsG0380014798.01.T01 AT4G21690 27.740 292 182 8 31 301 44 327 5.25e-24 100
MsG0380014798.01.T01 AT4G22880 28.014 282 171 9 29 288 42 313 1.22e-23 100
MsG0380014798.01.T01 AT4G22880 28.014 282 171 9 29 288 42 313 1.22e-23 100
MsG0380014798.01.T01 AT4G22880 28.014 282 171 9 29 288 42 313 1.22e-23 100
MsG0380014798.01.T01 AT1G03400 27.875 287 178 8 34 301 56 332 2.43e-23 99.0
MsG0380014798.01.T01 AT2G30830 29.098 244 157 6 50 286 80 314 2.82e-23 99.0
MsG0380014798.01.T01 AT5G43440 27.059 255 145 7 24 256 52 287 4.17e-23 97.4
MsG0380014798.01.T01 AT1G06645 29.008 262 156 10 34 279 77 324 5.12e-23 98.6
MsG0380014798.01.T01 AT4G25310 28.980 245 126 7 43 279 69 273 7.18e-23 97.4
MsG0380014798.01.T01 AT5G07200 25.072 347 208 13 10 312 29 367 9.08e-23 97.8
MsG0380014798.01.T01 AT1G06620 28.405 257 160 8 8 252 39 283 1.41e-22 95.9
MsG0380014798.01.T01 AT5G43935 28.358 268 152 8 34 288 19 259 1.91e-22 95.5
MsG0380014798.01.T01 AT2G44800 27.063 303 166 11 34 301 52 334 2.34e-22 96.3
MsG0380014798.01.T01 AT5G43450 26.154 260 164 6 18 258 36 286 4.14e-22 94.7
MsG0380014798.01.T01 AT5G59540 26.695 236 144 7 34 252 61 284 6.90e-22 94.0
MsG0380014798.01.T01 AT3G61400 28.105 306 172 14 34 303 60 353 9.34e-22 95.1
MsG0380014798.01.T01 AT2G19590 28.980 245 151 8 52 288 21 250 2.36e-21 92.8
MsG0380014798.01.T01 AT1G60980 24.667 300 186 7 34 301 57 348 7.73e-21 92.4
MsG0380014798.01.T01 AT3G51240 24.688 320 198 11 31 323 35 338 1.21e-20 91.7
MsG0380014798.01.T01 AT3G60290 25.667 300 169 11 34 301 52 329 1.99e-20 90.9
MsG0380014798.01.T01 AT5G51310 25.591 254 158 8 46 279 21 263 3.06e-20 90.1
MsG0380014798.01.T01 AT1G06640 27.686 242 153 7 34 262 64 296 4.54e-20 89.4
MsG0380014798.01.T01 AT1G04380 27.907 258 149 9 18 254 24 265 5.13e-20 88.6
MsG0380014798.01.T01 AT1G06650 27.706 231 145 6 34 251 64 285 1.08e-19 88.2
MsG0380014798.01.T01 AT5G51810 27.848 237 146 8 34 253 63 291 1.18e-19 87.8
MsG0380014798.01.T01 AT4G25420 24.275 276 172 8 8 256 31 296 2.13e-19 87.0
MsG0380014798.01.T01 AT2G25450 28.631 241 154 8 47 280 77 306 3.21e-19 87.4
MsG0380014798.01.T01 AT2G30840 26.446 242 158 8 49 282 83 312 3.71e-19 87.4
MsG0380014798.01.T01 AT3G12900 25.095 263 179 7 29 282 54 307 1.29e-18 85.9
MsG0380014798.01.T01 AT1G06640 27.511 229 144 6 34 249 64 283 4.74e-18 83.2
MsG0380014798.01.T01 AT1G03400 25.397 315 178 9 34 301 56 360 8.86e-18 83.6
MsG0380014798.01.T01 AT4G23340 29.381 194 111 8 149 319 1 191 3.14e-17 79.3
MsG0380014798.01.T01 AT1G14120 26.103 272 168 8 34 290 8 261 9.21e-17 80.1
MsG0380014798.01.T01 AT1G14120 26.103 272 168 8 34 290 8 261 9.21e-17 80.1
MsG0380014798.01.T01 AT1G14120 26.103 272 168 8 34 290 8 261 9.21e-17 80.1
MsG0380014798.01.T01 AT1G47990 23.438 320 180 12 27 305 8 303 1.10e-16 79.7
MsG0380014798.01.T01 AT3G50210 23.048 269 173 10 45 289 36 294 1.37e-16 79.7
MsG0380014798.01.T01 AT3G50210 23.048 269 173 10 45 289 36 294 1.37e-16 79.7
MsG0380014798.01.T01 AT3G50210 23.048 269 173 10 45 289 36 294 1.37e-16 79.7
MsG0380014798.01.T01 AT4G16330 30.189 159 106 3 146 300 75 232 1.47e-16 78.6
MsG0380014798.01.T01 AT4G25300 32.576 132 85 2 152 279 79 210 4.80e-16 77.0
MsG0380014798.01.T01 AT5G63580 28.017 232 144 7 34 252 19 240 7.71e-16 76.3
MsG0380014798.01.T01 AT2G30840 26.033 242 153 9 49 282 83 306 9.62e-16 77.4
MsG0380014798.01.T01 AT1G52800 26.007 273 155 10 49 296 37 287 1.30e-15 76.6
MsG0380014798.01.T01 AT1G30040 25.210 238 148 9 31 251 28 252 1.52e-15 75.9
MsG0380014798.01.T01 AT5G63580 27.826 230 143 7 34 250 19 238 2.20e-15 75.1
MsG0380014798.01.T01 AT3G46500 24.407 295 182 11 25 289 3 286 2.30e-15 76.3
MsG0380014798.01.T01 AT5G12270 25.862 290 183 10 18 289 41 316 3.81e-15 75.9
MsG0380014798.01.T01 AT1G52820 23.273 275 186 7 42 301 31 295 5.46e-15 75.1
MsG0380014798.01.T01 AT1G35190 25.342 292 184 10 28 289 1 288 1.01e-14 74.3
MsG0380014798.01.T01 AT5G07480 23.397 312 181 12 30 301 40 333 1.44e-14 73.9
MsG0380014798.01.T01 AT3G51240 30.070 143 94 4 151 288 75 216 4.33e-14 71.6
MsG0380014798.01.T01 AT2G30840 24.762 210 140 6 49 252 83 280 1.59e-13 70.5
MsG0380014798.01.T01 AT3G46490 23.569 297 189 10 25 289 3 293 2.99e-13 70.1
MsG0380014798.01.T01 AT4G03070 28.395 162 91 6 164 301 140 300 2.05e-11 64.3

Find 81 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAATTCATTGTAGGTAAA+TGG 0.218226 3:-60296171 None:intergenic
AAAGCCCTATCAAATACTTT+TGG 0.232889 3:+60291824 MsG0380014798.01.T01:CDS
AGTTGTTCCAAAAGGGTTAT+TGG 0.236584 3:-60291739 None:intergenic
CATTTACCTACAATGAATTC+AGG 0.271182 3:+60296172 MsG0380014798.01.T01:CDS
ATATGCTACTTTGTATTTCC+TGG 0.273322 3:+60296114 MsG0380014798.01.T01:CDS
TTGCTGTCCGAGATGGAGTT+AGG 0.309645 3:-60291858 None:intergenic
CAAAATATCAATTGGGTTGA+AGG 0.317985 3:+60291895 MsG0380014798.01.T01:CDS
TCCACCCACTGATGTTGGTT+GGG 0.318462 3:+60294469 MsG0380014798.01.T01:CDS
TGGTGTTCCAATAACCCTTT+TGG 0.323371 3:+60291732 MsG0380014798.01.T01:CDS
AAGGTCCTCAAAATATCAAT+TGG 0.335613 3:+60291887 MsG0380014798.01.T01:CDS
GAGTCTTCAACTATGTCATT+TGG 0.347839 3:-60291616 None:intergenic
GAAATAAAGTTGGGCTTTCA+AGG 0.348402 3:+60296226 MsG0380014798.01.T01:CDS
AGTCCACTCACATGGTCATC+TGG 0.350321 3:-60294536 None:intergenic
CTATGTCATTTGGGACATAA+AGG 0.358496 3:-60291606 None:intergenic
GGACAAAGAAAATAGTTGTT+TGG 0.363936 3:-60291773 None:intergenic
TTGTGCCCTGAATTCATTGT+AGG 0.366396 3:-60296178 None:intergenic
GTACCCCAAAAGTATTTGAT+AGG 0.370868 3:-60291829 None:intergenic
GGATGAGGCTTGCAAGGAAT+GGG 0.382366 3:+60291687 MsG0380014798.01.T01:CDS
AGTCTTCAACTATGTCATTT+GGG 0.386106 3:-60291615 None:intergenic
CTATTCCGTTTGGTTAATCA+TGG 0.393642 3:+60291712 MsG0380014798.01.T01:CDS
AATCTTGAAGTTGTTCCAAA+AGG 0.399640 3:-60291747 None:intergenic
TTGTAGCAATTCTTGAAAGA+TGG 0.402223 3:-60294349 None:intergenic
AAAACCCTTGGAAATAAAGT+TGG 0.407819 3:+60296216 MsG0380014798.01.T01:CDS
TTGAGATCTATGATTGGAAT+AGG 0.408534 3:-60291643 None:intergenic
ATGGTCATCTGGGTTCAATA+TGG 0.419496 3:-60294525 None:intergenic
GTCTTCTTCGCAATTAGCCT+TGG 0.419941 3:-60296260 None:intergenic
CACTGATGTTGGTTGGGGCA+TGG 0.426417 3:+60294475 MsG0380014798.01.T01:CDS
TTCCTTCACTCGAGTCCATC+AGG 0.436361 3:+60291962 MsG0380014798.01.T01:CDS
TTATTGTGTTGGCGGAGAAT+TGG 0.456938 3:-60291571 None:intergenic
CCACCCACTGATGTTGGTTG+GGG 0.459100 3:+60294470 MsG0380014798.01.T01:CDS
TGTAGCAATTCTTGAAAGAT+GGG 0.463737 3:-60294348 None:intergenic
AAACCCTTGGAAATAAAGTT+GGG 0.464592 3:+60296217 MsG0380014798.01.T01:CDS
ATCCACCCACTGATGTTGGT+TGG 0.465205 3:+60294468 MsG0380014798.01.T01:CDS
TACAACTTTATTTGAAGCAA+TGG 0.466551 3:+60294367 MsG0380014798.01.T01:CDS
TGGATGAGGCTTGCAAGGAA+TGG 0.468427 3:+60291686 MsG0380014798.01.T01:CDS
GGAATGGGGTCTATTCCGTT+TGG 0.472456 3:+60291702 MsG0380014798.01.T01:CDS
ATCTTGAAGTTGTTCCAAAA+GGG 0.472517 3:-60291746 None:intergenic
ACAATCAATGTGTTGGAAGC+TGG 0.474366 3:-60294596 None:intergenic
GTCCGAGATGGAGTTAGGGC+AGG 0.475414 3:-60291853 None:intergenic
AAGCACTTGAGATCTATGAT+TGG 0.478835 3:-60291649 None:intergenic
TTGTGTTGGCGGAGAATTGG+AGG 0.480117 3:-60291568 None:intergenic
GTGGTTGGTTATTGTGTTGG+CGG 0.485329 3:-60291579 None:intergenic
TTTGTTATTGCTGTCCGAGA+TGG 0.494303 3:-60291865 None:intergenic
AAAGCCCAACTTTATTTCCA+AGG 0.496818 3:-60296221 None:intergenic
TGCTGTCCGAGATGGAGTTA+GGG 0.499944 3:-60291857 None:intergenic
AAATTTGGATGAGGCTTGCA+AGG 0.500207 3:+60291681 MsG0380014798.01.T01:CDS
GAACACCATGATTAACCAAA+CGG 0.502518 3:-60291717 None:intergenic
TTTGTGGTTGGTTATTGTGT+TGG 0.504282 3:-60291582 None:intergenic
GTCCACTCACATGGTCATCT+GGG 0.515908 3:-60294535 None:intergenic
AGGTCCTCAAAATATCAATT+GGG 0.518990 3:+60291888 MsG0380014798.01.T01:CDS
AACACATTGATTGTCAACCT+TGG 0.531876 3:+60294605 MsG0380014798.01.T01:CDS
AAGCCCAACTTTATTTCCAA+GGG 0.534287 3:-60296220 None:intergenic
CAACAAGACATCAAAACCCT+TGG 0.536449 3:+60296204 MsG0380014798.01.T01:CDS
CGAGTGAAGGAAGTTGATGT+TGG 0.538431 3:-60291951 None:intergenic
AAGTTCTCAAAGATGATCAA+TGG 0.538791 3:+60294561 MsG0380014798.01.T01:CDS
CGTTATCCACCCACTGATGT+TGG 0.551489 3:+60294464 MsG0380014798.01.T01:CDS
TCTCGGACAGCAATAACAAA+AGG 0.552248 3:+60291868 MsG0380014798.01.T01:CDS
TCCGAGATGGAGTTAGGGCA+GGG 0.562588 3:-60291852 None:intergenic
TACCCCAAAAGTATTTGATA+GGG 0.565928 3:-60291828 None:intergenic
AGGTAGAGAAAGATATAGAG+AGG 0.566840 3:+60296085 MsG0380014798.01.T01:CDS
ATTTACCTACAATGAATTCA+GGG 0.568037 3:+60296173 MsG0380014798.01.T01:CDS
CCCCTGCCCTAACTCCATCT+CGG 0.575730 3:+60291851 MsG0380014798.01.T01:CDS
TCAATCACAACGTCTTCACC+AGG 0.577291 3:-60296132 None:intergenic
AAGGTTGACAATCAATGTGT+TGG 0.579083 3:-60294603 None:intergenic
CAACCTTGGTGACATGATGC+AGG 0.582770 3:+60294619 MsG0380014798.01.T01:CDS
TTGGCGGAGAATTGGAGGGT+AGG 0.589074 3:-60291563 None:intergenic
TACCTGATGGACTCGAGTGA+AGG 0.596137 3:-60291964 None:intergenic
TGTGTTGGCGGAGAATTGGA+GGG 0.605017 3:-60291567 None:intergenic
ATGCCCCAACCAACATCAGT+GGG 0.610403 3:-60294473 None:intergenic
GATGAGGCTTGCAAGGAATG+GGG 0.613568 3:+60291688 MsG0380014798.01.T01:CDS
TGATGTTGGTTGGGGCATGG+AGG 0.624574 3:+60294478 MsG0380014798.01.T01:CDS
TCAAGGTTTCAGCAGAACCA+AGG 0.624970 3:+60296243 MsG0380014798.01.T01:CDS
CCGAGATGGAGTTAGGGCAG+GGG 0.628081 3:-60291851 None:intergenic
GAACTTGAAGTCCACTCACA+TGG 0.631164 3:-60294544 None:intergenic
GAGTGTGTCACATAGAGTGA+AGG 0.631791 3:+60296065 MsG0380014798.01.T01:CDS
CATGCCCCAACCAACATCAG+TGG 0.640789 3:-60294474 None:intergenic
CCCCAACCAACATCAGTGGG+TGG 0.649461 3:-60294470 None:intergenic
AACCCAGATGACCATGTGAG+TGG 0.658082 3:+60294533 MsG0380014798.01.T01:CDS
AGACCTGCATCATGTCACCA+AGG 0.690147 3:-60294622 None:intergenic
TCATATTTATCAGAAAACAC+AGG 0.698396 3:+60294425 MsG0380014798.01.T01:CDS
AAGTGAGAGAGTTGACACAA+TGG 0.709390 3:-60291928 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+GGG + Chr3:60294769-60294788 MsG0380014798.01.T01:intron 0.0%
!! TATATATATATATATATATA+TGG + Chr3:60294770-60294789 MsG0380014798.01.T01:intron 0.0%
!! AAAATTATAACATAGATTTA+TGG + Chr3:60292681-60292700 MsG0380014798.01.T01:intron 10.0%
!! AAATTATAACATAGATTTAT+GGG + Chr3:60292682-60292701 MsG0380014798.01.T01:intron 10.0%
!! AATAATAATAAACTAACAAA+TGG + Chr3:60292393-60292412 MsG0380014798.01.T01:intron 10.0%
!! ATGATTAATTAACATATAAT+TGG + Chr3:60294037-60294056 MsG0380014798.01.T01:intron 10.0%
!!! ACAAAAGTATAAATTAAAAT+TGG - Chr3:60295902-60295921 None:intergenic 10.0%
!!! TAATCTCTAATAAATTTTAA+TGG - Chr3:60295627-60295646 None:intergenic 10.0%
!!! TTTTAACTAAATTATCAAAT+TGG - Chr3:60292428-60292447 None:intergenic 10.0%
!! AAAAATTAAATAAGTGCATA+GGG - Chr3:60295830-60295849 None:intergenic 15.0%
!! AAAACAATTGAAAAGAAAAT+TGG + Chr3:60293703-60293722 MsG0380014798.01.T01:intron 15.0%
!! GTTAAAAAAAACTAATTTGA+AGG + Chr3:60292441-60292460 MsG0380014798.01.T01:intron 15.0%
!! TAAAAATTAAATAAGTGCAT+AGG - Chr3:60295831-60295850 None:intergenic 15.0%
!! TAAGAAATTGCAAAAAATTT+AGG + Chr3:60295173-60295192 MsG0380014798.01.T01:intron 15.0%
!! TAATCCTTCAAAAAAAAAAA+AGG - Chr3:60293082-60293101 None:intergenic 15.0%
!! TCATTACTCATAATTTAATT+TGG + Chr3:60294655-60294674 MsG0380014798.01.T01:intron 15.0%
!! TGAGTTTAATTATATTAACA+AGG - Chr3:60293113-60293132 None:intergenic 15.0%
!!! AACTTATTCTAGAAAAATAA+AGG + Chr3:60295922-60295941 MsG0380014798.01.T01:intron 15.0%
!!! AATCAAAATCTCTATTTTTT+GGG - Chr3:60295269-60295288 None:intergenic 15.0%
!!! ACTTATTCTAGAAAAATAAA+GGG + Chr3:60295923-60295942 MsG0380014798.01.T01:intron 15.0%
!!! ACTTTTTTCTTTGTAAAATA+TGG + Chr3:60295425-60295444 MsG0380014798.01.T01:intron 15.0%
!!! AGTGTATCTTTTTATTTAAT+AGG + Chr3:60292968-60292987 MsG0380014798.01.T01:intron 15.0%
!!! ATATCCTTTTTTTTTTTTGA+AGG + Chr3:60293075-60293094 MsG0380014798.01.T01:intron 15.0%
!!! ATATTTTACAAAGAAAAAAG+TGG - Chr3:60295426-60295445 None:intergenic 15.0%
!!! ATGTTAATTAATCATTTTTC+AGG - Chr3:60294032-60294051 None:intergenic 15.0%
!!! ATTACTAAGCATTATTTTTA+AGG + Chr3:60293187-60293206 MsG0380014798.01.T01:intron 15.0%
!!! ATTTTCTTTTCAATTGTTTT+TGG - Chr3:60293703-60293722 None:intergenic 15.0%
!!! CTATTCTAATGTATTTATTT+TGG + Chr3:60296014-60296033 MsG0380014798.01.T01:intron 15.0%
!!! TAATATTTGAGTGTTATTTT+TGG - Chr3:60295747-60295766 None:intergenic 15.0%
!!! TAATGTATTTATTTTGGTTT+AGG + Chr3:60296020-60296039 MsG0380014798.01.T01:intron 15.0%
!!! TATTATTTCATCTTTTTTCA+TGG + Chr3:60294063-60294082 MsG0380014798.01.T01:intron 15.0%
!!! TCTATCTTCAAATATTTTTT+TGG - Chr3:60293792-60293811 None:intergenic 15.0%
!!! TGTTCTTTTCATTTTTTTTA+AGG - Chr3:60293284-60293303 None:intergenic 15.0%
!!! TTAAGTTTTTTTATGTTATG+TGG + Chr3:60293827-60293846 MsG0380014798.01.T01:intron 15.0%
!!! TTGTGTGTATAAATTTTTAA+TGG + Chr3:60293641-60293660 MsG0380014798.01.T01:intron 15.0%
!! AAAAATGAAAAGAACAAACA+TGG + Chr3:60293288-60293307 MsG0380014798.01.T01:intron 20.0%
!! AAAATATAAGACACAAAAGA+TGG - Chr3:60292639-60292658 None:intergenic 20.0%
!! AAAATTAAATAAGTGCATAG+GGG - Chr3:60295829-60295848 None:intergenic 20.0%
!! AAAATTTGCAATACATTTAC+AGG + Chr3:60295057-60295076 MsG0380014798.01.T01:intron 20.0%
!! AAATTTGCAATACATTTACA+GGG + Chr3:60295058-60295077 MsG0380014798.01.T01:intron 20.0%
!! ATTACAAGTCTTAATATTAG+AGG + Chr3:60295763-60295782 MsG0380014798.01.T01:intron 20.0%
!! ATTTAGTCTGAAAATAATTG+TGG + Chr3:60292568-60292587 MsG0380014798.01.T01:intron 20.0%
!! GGTTTATATAAGAAATTCAA+GGG + Chr3:60295142-60295161 MsG0380014798.01.T01:intron 20.0%
!! GTTGAAATAAGAATTGTAAA+TGG - Chr3:60293555-60293574 None:intergenic 20.0%
!! GTTTATATAAGAAATTCAAG+GGG + Chr3:60295143-60295162 MsG0380014798.01.T01:intron 20.0%
!! TATATAAACCCCTATAAATT+GGG - Chr3:60295132-60295151 None:intergenic 20.0%
!! TTATATAAACCCCTATAAAT+TGG - Chr3:60295133-60295152 None:intergenic 20.0%
!! TTCTGAATGAAAATGAAATT+TGG - Chr3:60293230-60293249 None:intergenic 20.0%
!!! AAACATTTCGACAATTTTAT+CGG - Chr3:60293577-60293596 None:intergenic 20.0%
!!! ATCTTTTGTGTCTTATATTT+TGG + Chr3:60292638-60292657 MsG0380014798.01.T01:intron 20.0%
!!! ATTAAAATTCATTTTCTAGC+GGG + Chr3:60293137-60293156 MsG0380014798.01.T01:intron 20.0%
!!! ATTTATCTTTTGATTTCTGA+TGG - Chr3:60292887-60292906 None:intergenic 20.0%
!!! CATTAAAATTCATTTTCTAG+CGG + Chr3:60293136-60293155 MsG0380014798.01.T01:intron 20.0%
!!! CTTATTCTAGAAAAATAAAG+GGG + Chr3:60295924-60295943 MsG0380014798.01.T01:intron 20.0%
!!! CTTTTTATCAAATAGTATAG+CGG + Chr3:60293022-60293041 MsG0380014798.01.T01:intron 20.0%
!!! GAATCAAAATCTCTATTTTT+TGG - Chr3:60295270-60295289 None:intergenic 20.0%
!!! TCATTAATATTTTCCATTGA+TGG + Chr3:60292521-60292540 MsG0380014798.01.T01:intron 20.0%
!!! TCTTTTGTGTCTTATATTTT+GGG + Chr3:60292639-60292658 MsG0380014798.01.T01:intron 20.0%
!!! TTAGACTTTTATATTAGTCT+TGG + Chr3:60293425-60293444 MsG0380014798.01.T01:intron 20.0%
!!! TTCTTTCTAATTTGTGTAAA+AGG + Chr3:60292545-60292564 MsG0380014798.01.T01:intron 20.0%
! AAAAGTCTAACATCTTTAAC+CGG - Chr3:60293415-60293434 None:intergenic 25.0%
! AAAGAAATTGCCCAATTTAT+AGG + Chr3:60295119-60295138 MsG0380014798.01.T01:intron 25.0%
! AAATCTGATAATCCATTTCA+AGG - Chr3:60292821-60292840 None:intergenic 25.0%
! AAATTAAATAAGTGCATAGG+GGG - Chr3:60295828-60295847 None:intergenic 25.0%
! AAATTGCAAAAAATTTAGGC+CGG + Chr3:60295177-60295196 MsG0380014798.01.T01:intron 25.0%
! AAATTTATACACACAAGTTG+AGG - Chr3:60293637-60293656 None:intergenic 25.0%
! AAGAAATTGCCCAATTTATA+GGG + Chr3:60295120-60295139 MsG0380014798.01.T01:intron 25.0%
! AATTTGCAATACATTTACAG+GGG + Chr3:60295059-60295078 MsG0380014798.01.T01:intron 25.0%
! ACCATTTCTCAACAATAAAT+AGG + Chr3:60295961-60295980 MsG0380014798.01.T01:intron 25.0%
! ACTTTATCTCTCTATTGTTA+TGG + Chr3:60295386-60295405 MsG0380014798.01.T01:intron 25.0%
! ATAAAAGACACCTTCATAAA+AGG - Chr3:60294818-60294837 None:intergenic 25.0%
! ATTAGTACTACTACTATGAA+GGG + Chr3:60292141-60292160 MsG0380014798.01.T01:intron 25.0%
! ATTTACCTACAATGAATTCA+GGG + Chr3:60296173-60296192 MsG0380014798.01.T01:CDS 25.0%
! ATTTGAAGGATTTAGTCAAA+TGG + Chr3:60292455-60292474 MsG0380014798.01.T01:intron 25.0%
! GGGTTTATATAAGAAATTCA+AGG + Chr3:60295141-60295160 MsG0380014798.01.T01:intron 25.0%
! TAAACTAACAAATGGTCAAT+AGG + Chr3:60292401-60292420 MsG0380014798.01.T01:intron 25.0%
! TACAAAGAAAAAAGTGGTAT+TGG - Chr3:60295420-60295439 None:intergenic 25.0%
! TATAACATAGATTTATGGGT+CGG + Chr3:60292686-60292705 MsG0380014798.01.T01:intron 25.0%
! TATTAGTACTACTACTATGA+AGG + Chr3:60292140-60292159 MsG0380014798.01.T01:intron 25.0%
! TCATATTTATCAGAAAACAC+AGG + Chr3:60294425-60294444 MsG0380014798.01.T01:CDS 25.0%
! TCCTATTTATTGTTGAGAAA+TGG - Chr3:60295965-60295984 None:intergenic 25.0%
! TTATATTTGATTCAATCGTG+AGG + Chr3:60295711-60295730 MsG0380014798.01.T01:intron 25.0%
! TTTATTGTATGTCTCTTTCT+TGG + Chr3:60292613-60292632 MsG0380014798.01.T01:intron 25.0%
!! TACAACTTTATTTGAAGCAA+TGG + Chr3:60294367-60294386 MsG0380014798.01.T01:CDS 25.0%
!!! AAAAAAAGAGAAGTGTTGTT+TGG - Chr3:60295482-60295501 None:intergenic 25.0%
!!! ACAACACTTCTCTTTTTTTA+AGG + Chr3:60295483-60295502 MsG0380014798.01.T01:intron 25.0%
!!! GTTAATTTTCTGTTTTTCAG+AGG - Chr3:60293982-60294001 None:intergenic 25.0%
AAAACCCTTGGAAATAAAGT+TGG + Chr3:60296216-60296235 MsG0380014798.01.T01:CDS 30.0%
AAACCCTTGGAAATAAAGTT+GGG + Chr3:60296217-60296236 MsG0380014798.01.T01:CDS 30.0%
AAAGTGAAAATCACACCTTA+AGG + Chr3:60294915-60294934 MsG0380014798.01.T01:intron 30.0%
AAATATCCGTCTCATAGTTA+AGG + Chr3:60293901-60293920 MsG0380014798.01.T01:intron 30.0%
AAGGTCCTCAAAATATCAAT+TGG + Chr3:60291887-60291906 MsG0380014798.01.T01:CDS 30.0%
AAGTTCTCAAAGATGATCAA+TGG + Chr3:60294561-60294580 MsG0380014798.01.T01:CDS 30.0%
AATCTTGAAGTTGTTCCAAA+AGG - Chr3:60291750-60291769 None:intergenic 30.0%
AATTAGAAAGAAGCCATCAA+TGG - Chr3:60292537-60292556 None:intergenic 30.0%
AATTTGGTCCAATTTATGAG+AGG - Chr3:60293214-60293233 None:intergenic 30.0%
ACACCAAAACACAATAATCA+CGG + Chr3:60294000-60294019 MsG0380014798.01.T01:intron 30.0%
AGAAATTGCCCAATTTATAG+GGG + Chr3:60295121-60295140 MsG0380014798.01.T01:intron 30.0%
AGAACACAAAAATTTGGATG+AGG + Chr3:60291672-60291691 MsG0380014798.01.T01:CDS 30.0%
AGGTCCTCAAAATATCAATT+GGG + Chr3:60291888-60291907 MsG0380014798.01.T01:CDS 30.0%
AGTCTGAAAATAATTGTGGA+AGG + Chr3:60292572-60292591 MsG0380014798.01.T01:intron 30.0%
ATATATACACACACATACAC+AGG - Chr3:60295245-60295264 None:intergenic 30.0%
ATATGTGTATGTATGTACAG+TGG + Chr3:60295001-60295020 MsG0380014798.01.T01:intron 30.0%
ATCTTGAAGTTGTTCCAAAA+GGG - Chr3:60291749-60291768 None:intergenic 30.0%
CAAATAAGTTGTCACGAAAT+TGG + Chr3:60295452-60295471 MsG0380014798.01.T01:intron 30.0%
CATTTACCTACAATGAATTC+AGG + Chr3:60296172-60296191 MsG0380014798.01.T01:CDS 30.0%
CTGAATTCATTGTAGGTAAA+TGG - Chr3:60296174-60296193 None:intergenic 30.0%
CTTAACATGAATTTCCACAA+AGG - Chr3:60293163-60293182 None:intergenic 30.0%
GGACAAAGAAAATAGTTGTT+TGG - Chr3:60291776-60291795 None:intergenic 30.0%
GTGCTTAGAACACAAAAATT+TGG + Chr3:60291666-60291685 MsG0380014798.01.T01:CDS 30.0%
TATATACACACACATACACA+GGG - Chr3:60295244-60295263 None:intergenic 30.0%
TGCAATGTTATCTAAACAGT+CGG - Chr3:60293314-60293333 None:intergenic 30.0%
TGTAGCAATTCTTGAAAGAT+GGG - Chr3:60294351-60294370 None:intergenic 30.0%
TGTTTATGTTCATCATCTCA+TGG - Chr3:60295690-60295709 None:intergenic 30.0%
TTAATATTGTGCATACCTGA+TGG - Chr3:60291980-60291999 None:intergenic 30.0%
TTACCTTTGAATCAAGTATG+AGG + Chr3:60295581-60295600 MsG0380014798.01.T01:intron 30.0%
TTGAGATCTATGATTGGAAT+AGG - Chr3:60291646-60291665 None:intergenic 30.0%
TTGCAAAAGTTGTCACTAAA+TGG - Chr3:60295334-60295353 None:intergenic 30.0%
TTGTAGCAATTCTTGAAAGA+TGG - Chr3:60294352-60294371 None:intergenic 30.0%
! AAACCGTGATTATTGTGTTT+TGG - Chr3:60294006-60294025 None:intergenic 30.0%
! AAAGCCCTATCAAATACTTT+TGG + Chr3:60291824-60291843 MsG0380014798.01.T01:CDS 30.0%
! AAGCCCTATCAAATACTTTT+GGG + Chr3:60291825-60291844 MsG0380014798.01.T01:CDS 30.0%
! AGTCTTCAACTATGTCATTT+GGG - Chr3:60291618-60291637 None:intergenic 30.0%
! ATAGAAGACACCTTTTATGA+AGG + Chr3:60294805-60294824 MsG0380014798.01.T01:intron 30.0%
! CATTGGATTAGGACTTTAAA+TGG + Chr3:60293858-60293877 MsG0380014798.01.T01:intron 30.0%
! CCAAAATTTTTATAAAGCCC+GGG + Chr3:60295029-60295048 MsG0380014798.01.T01:intron 30.0%
! GCCAAAATTTTTATAAAGCC+CGG + Chr3:60295028-60295047 MsG0380014798.01.T01:intron 30.0%
! GTTATAATTTTCCACATGCA+TGG - Chr3:60292672-60292691 None:intergenic 30.0%
! TCAACCCAATTGATATTTTG+AGG - Chr3:60291895-60291914 None:intergenic 30.0%
! TGAGAATGTGACATTTTGTT+TGG + Chr3:60292735-60292754 MsG0380014798.01.T01:intron 30.0%
! TTTAAGGTCCTCTCATAAAT+TGG + Chr3:60293203-60293222 MsG0380014798.01.T01:intron 30.0%
! TTTTATCAAGTCACACCTTA+AGG - Chr3:60294933-60294952 None:intergenic 30.0%
!! AAAGACACCAACTTACTTTT+AGG + Chr3:60294863-60294882 MsG0380014798.01.T01:intron 30.0%
!! ATATGCTACTTTGTATTTCC+TGG + Chr3:60296114-60296133 MsG0380014798.01.T01:CDS 30.0%
!! CAAAATATCAATTGGGTTGA+AGG + Chr3:60291895-60291914 MsG0380014798.01.T01:CDS 30.0%
!! GTTTTGACCAATTGGATATT+TGG + Chr3:60292784-60292803 MsG0380014798.01.T01:intron 30.0%
!! TACCCCAAAAGTATTTGATA+GGG - Chr3:60291831-60291850 None:intergenic 30.0%
!!! CTATGAAGGGATTATTTTTG+AGG + Chr3:60292154-60292173 MsG0380014798.01.T01:intron 30.0%
!!! TATTGCAAATTTTTTTCGCC+CGG - Chr3:60295050-60295069 None:intergenic 30.0%
!!! TGCTTCTTGTTTTGATTCAA+AGG - Chr3:60291797-60291816 None:intergenic 30.0%
AACTAAGGACCATAAAGTTG+AGG + Chr3:60295518-60295537 MsG0380014798.01.T01:intron 35.0%
AAGCACTTGAGATCTATGAT+TGG - Chr3:60291652-60291671 None:intergenic 35.0%
AAGGTTGACAATCAATGTGT+TGG - Chr3:60294606-60294625 None:intergenic 35.0%
ACACCTTCCTAAAAGTAAGT+TGG - Chr3:60294873-60294892 None:intergenic 35.0%
AGGTAGAGAAAGATATAGAG+AGG + Chr3:60296085-60296104 MsG0380014798.01.T01:CDS 35.0%
AGTTACATGTTTCCTTTGCA+AGG + Chr3:60294303-60294322 MsG0380014798.01.T01:intron 35.0%
AGTTGTTCCAAAAGGGTTAT+TGG - Chr3:60291742-60291761 None:intergenic 35.0%
ATATACACACACATACACAG+GGG - Chr3:60295243-60295262 None:intergenic 35.0%
CATTAGTAAAAGCCTTGCAA+AGG - Chr3:60294318-60294337 None:intergenic 35.0%
CTATTCCGTTTGGTTAATCA+TGG + Chr3:60291712-60291731 MsG0380014798.01.T01:CDS 35.0%
GAAATAAAGTTGGGCTTTCA+AGG + Chr3:60296226-60296245 MsG0380014798.01.T01:CDS 35.0%
GAACACCATGATTAACCAAA+CGG - Chr3:60291720-60291739 None:intergenic 35.0%
GAGTCTTCAACTATGTCATT+TGG - Chr3:60291619-60291638 None:intergenic 35.0%
GATTGTGCAAATCCTTGAAA+TGG + Chr3:60292806-60292825 MsG0380014798.01.T01:intron 35.0%
GCACAATCCAAATATCCAAT+TGG - Chr3:60292794-60292813 None:intergenic 35.0%
GTTATGTGGTTTCTCTACAT+TGG + Chr3:60293841-60293860 MsG0380014798.01.T01:intron 35.0%
TATCCAATTGGTCAAAACAC+CGG - Chr3:60292782-60292801 None:intergenic 35.0%
TCACCTCATACTTGATTCAA+AGG - Chr3:60295587-60295606 None:intergenic 35.0%
TGATAAAAGACACCACCAAA+GGG + Chr3:60294945-60294964 MsG0380014798.01.T01:intron 35.0%
TGGTTTCTCTACATTGGATT+AGG + Chr3:60293847-60293866 MsG0380014798.01.T01:intron 35.0%
TTAATGTCCCTTAAACCACT+TGG - Chr3:60295558-60295577 None:intergenic 35.0%
TTGATAAAAGACACCACCAA+AGG + Chr3:60294944-60294963 MsG0380014798.01.T01:intron 35.0%
! AAAGCCCAACTTTATTTCCA+AGG - Chr3:60296224-60296243 None:intergenic 35.0%
! AACACATTGATTGTCAACCT+TGG + Chr3:60294605-60294624 MsG0380014798.01.T01:CDS 35.0%
! AAGCCCAACTTTATTTCCAA+GGG - Chr3:60296223-60296242 None:intergenic 35.0%
! AGCCCTATCAAATACTTTTG+GGG + Chr3:60291826-60291845 MsG0380014798.01.T01:CDS 35.0%
! ATACACACAAGTTGAGGAAT+TGG - Chr3:60293631-60293650 None:intergenic 35.0%
! ATCTTGTTTAAACTGCACGT+TGG - Chr3:60292856-60292875 None:intergenic 35.0%
! CTATGTCATTTGGGACATAA+AGG - Chr3:60291609-60291628 None:intergenic 35.0%
! CTTTGCAAGGCTTTTACTAA+TGG + Chr3:60294316-60294335 MsG0380014798.01.T01:intron 35.0%
! TTTGTGGTTGGTTATTGTGT+TGG - Chr3:60291585-60291604 None:intergenic 35.0%
!! ACACCAACTTACTTTTAGGA+AGG + Chr3:60294867-60294886 MsG0380014798.01.T01:intron 35.0%
!! AGAAAAAAGTGGTATTGGCA+CGG - Chr3:60295415-60295434 None:intergenic 35.0%
!! CCCGGGCTTTATAAAAATTT+TGG - Chr3:60295032-60295051 None:intergenic 35.0%
!! GTACCCCAAAAGTATTTGAT+AGG - Chr3:60291832-60291851 None:intergenic 35.0%
!! TTTGGGACATAAAGGTTTTG+TGG - Chr3:60291601-60291620 None:intergenic 35.0%
!!! ATTGCAAATTTTTTTCGCCC+GGG - Chr3:60295049-60295068 None:intergenic 35.0%
!!! GTTTTTTTAGAGAGAGAGTC+CGG + Chr3:60293393-60293412 MsG0380014798.01.T01:intron 35.0%
AAATTTGGATGAGGCTTGCA+AGG + Chr3:60291681-60291700 MsG0380014798.01.T01:CDS 40.0%
AAGTGAGAGAGTTGACACAA+TGG - Chr3:60291931-60291950 None:intergenic 40.0%
ACAATCAATGTGTTGGAAGC+TGG - Chr3:60294599-60294618 None:intergenic 40.0%
AGATTTATGGGTCGGTTGTT+GGG + Chr3:60292694-60292713 MsG0380014798.01.T01:intron 40.0%
AGGTGTTAAGTCTCGAACTA+AGG + Chr3:60295503-60295522 MsG0380014798.01.T01:intron 40.0%
ATGGTCATCTGGGTTCAATA+TGG - Chr3:60294528-60294547 None:intergenic 40.0%
CAACAAGACATCAAAACCCT+TGG + Chr3:60296204-60296223 MsG0380014798.01.T01:CDS 40.0%
CCTACAACCAAGTGGTTTAA+GGG + Chr3:60295548-60295567 MsG0380014798.01.T01:intron 40.0%
TAGATTTATGGGTCGGTTGT+TGG + Chr3:60292693-60292712 MsG0380014798.01.T01:intron 40.0%
TCCTACAACCAAGTGGTTTA+AGG + Chr3:60295547-60295566 MsG0380014798.01.T01:intron 40.0%
TCTCGGACAGCAATAACAAA+AGG + Chr3:60291868-60291887 MsG0380014798.01.T01:CDS 40.0%
TGTGTATGTATGTACAGTGG+CGG + Chr3:60295004-60295023 MsG0380014798.01.T01:intron 40.0%
TTATGTTACAAGCCACCCTT+TGG - Chr3:60294963-60294982 None:intergenic 40.0%
TTGTGCCCTGAATTCATTGT+AGG - Chr3:60296181-60296200 None:intergenic 40.0%
! TGGTGTTCCAATAACCCTTT+TGG + Chr3:60291732-60291751 MsG0380014798.01.T01:CDS 40.0%
! TTATTGTGTTGGCGGAGAAT+TGG - Chr3:60291574-60291593 None:intergenic 40.0%
!! GGACATAAAGGTTTTGTGGT+TGG - Chr3:60291597-60291616 None:intergenic 40.0%
!! TTTGTTATTGCTGTCCGAGA+TGG - Chr3:60291868-60291887 None:intergenic 40.0%
AAAAAATTTAGGCCGGAGCC+CGG + Chr3:60295184-60295203 MsG0380014798.01.T01:intron 45.0%
AAAGCCTGTACGACAGCTTT+AGG - Chr3:60295789-60295808 None:intergenic 45.0%
CCATCGCCTTAACTATGAGA+CGG - Chr3:60293910-60293929 None:intergenic 45.0%
CCCAATAACACTGCATGAAC+CGG + Chr3:60292760-60292779 MsG0380014798.01.T01:intron 45.0%
CCCTTAAACCACTTGGTTGT+AGG - Chr3:60295551-60295570 None:intergenic 45.0%
GAACTTGAAGTCCACTCACA+TGG - Chr3:60294547-60294566 None:intergenic 45.0%
GAGTGTGTCACATAGAGTGA+AGG + Chr3:60296065-60296084 MsG0380014798.01.T01:CDS 45.0%
TAAAAGACACCACCAAAGGG+TGG + Chr3:60294948-60294967 MsG0380014798.01.T01:intron 45.0%
TCAAGGTTTCAGCAGAACCA+AGG + Chr3:60296243-60296262 MsG0380014798.01.T01:CDS 45.0%
TCAATCACAACGTCTTCACC+AGG - Chr3:60296135-60296154 None:intergenic 45.0%
! ACCGGTTCATGCAGTGTTAT+TGG - Chr3:60292764-60292783 None:intergenic 45.0%
! CCGGTTCATGCAGTGTTATT+GGG - Chr3:60292763-60292782 None:intergenic 45.0%
! GTGGTTGGTTATTGTGTTGG+CGG - Chr3:60291582-60291601 None:intergenic 45.0%
!! CGAGTGAAGGAAGTTGATGT+TGG - Chr3:60291954-60291973 None:intergenic 45.0%
!!! GAACCGGTGTTTTGACCAAT+TGG + Chr3:60292776-60292795 MsG0380014798.01.T01:intron 45.0%
!! ACATATATATATATATATAT+AGG - Chr3:60294987-60295006 None:intergenic 5.0%
!! ATTATTATATTATATTATGA+AGG + Chr3:60292031-60292050 MsG0380014798.01.T01:intron 5.0%
!! CATATATATATATATATATA+GGG - Chr3:60294778-60294797 None:intergenic 5.0%
!! TATAAATAAATAAAAAAAGT+AGG + Chr3:60293766-60293785 MsG0380014798.01.T01:intron 5.0%
!! TTATTATATTATATTATGAA+GGG + Chr3:60292032-60292051 MsG0380014798.01.T01:intron 5.0%
!!! TTTTTAACAAATTTATTTTT+TGG + Chr3:60294088-60294107 MsG0380014798.01.T01:intron 5.0%
AAAAATTTAGGCCGGAGCCC+GGG + Chr3:60295185-60295204 MsG0380014798.01.T01:intron 50.0%
AACCCAGATGACCATGTGAG+TGG + Chr3:60294533-60294552 MsG0380014798.01.T01:CDS 50.0%
AAGTGCATAGGGGGTCCATA+GGG - Chr3:60295819-60295838 None:intergenic 50.0%
AGACCTGCATCATGTCACCA+AGG - Chr3:60294625-60294644 None:intergenic 50.0%
AGTCCACTCACATGGTCATC+TGG - Chr3:60294539-60294558 None:intergenic 50.0%
ATAGGGGGTCCATAGGGATT+AGG - Chr3:60295813-60295832 None:intergenic 50.0%
ATCCACCCACTGATGTTGGT+TGG + Chr3:60294468-60294487 MsG0380014798.01.T01:CDS 50.0%
ATGCCCCAACCAACATCAGT+GGG - Chr3:60294476-60294495 None:intergenic 50.0%
CAGGCTTTCCCTAATCCCTA+TGG + Chr3:60295801-60295820 MsG0380014798.01.T01:intron 50.0%
CCGTCTCATAGTTAAGGCGA+TGG + Chr3:60293907-60293926 MsG0380014798.01.T01:intron 50.0%
CGTTATCCACCCACTGATGT+TGG + Chr3:60294464-60294483 MsG0380014798.01.T01:CDS 50.0%
GATGAGGCTTGCAAGGAATG+GGG + Chr3:60291688-60291707 MsG0380014798.01.T01:CDS 50.0%
GGAATGGGGTCTATTCCGTT+TGG + Chr3:60291702-60291721 MsG0380014798.01.T01:CDS 50.0%
GGATGAGGCTTGCAAGGAAT+GGG + Chr3:60291687-60291706 MsG0380014798.01.T01:CDS 50.0%
GTCCACTCACATGGTCATCT+GGG - Chr3:60294538-60294557 None:intergenic 50.0%
TAAGTGCATAGGGGGTCCAT+AGG - Chr3:60295820-60295839 None:intergenic 50.0%
TACACACACATACACAGGGG+CGG - Chr3:60295240-60295259 None:intergenic 50.0%
TAGGGGGTCCATAGGGATTA+GGG - Chr3:60295812-60295831 None:intergenic 50.0%
TGCTGTCCGAGATGGAGTTA+GGG - Chr3:60291860-60291879 None:intergenic 50.0%
TGGATGAGGCTTGCAAGGAA+TGG + Chr3:60291686-60291705 MsG0380014798.01.T01:CDS 50.0%
TGGGAGTTTGTCCATGCATG+TGG + Chr3:60292658-60292677 MsG0380014798.01.T01:intron 50.0%
TGTTACAAGCCACCCTTTGG+TGG - Chr3:60294960-60294979 None:intergenic 50.0%
TTCCTTCACTCGAGTCCATC+AGG + Chr3:60291962-60291981 MsG0380014798.01.T01:CDS 50.0%
TTGCTGTCCGAGATGGAGTT+AGG - Chr3:60291861-60291880 None:intergenic 50.0%
! CAACCTTGGTGACATGATGC+AGG + Chr3:60294619-60294638 MsG0380014798.01.T01:CDS 50.0%
! TCCACCCACTGATGTTGGTT+GGG + Chr3:60294469-60294488 MsG0380014798.01.T01:CDS 50.0%
! TGTGTTGGCGGAGAATTGGA+GGG - Chr3:60291570-60291589 None:intergenic 50.0%
! TTGTGTTGGCGGAGAATTGG+AGG - Chr3:60291571-60291590 None:intergenic 50.0%
!! CATTTTCTAGCGGGCCTTTG+TGG + Chr3:60293146-60293165 MsG0380014798.01.T01:intron 50.0%
!! TACCTGATGGACTCGAGTGA+AGG - Chr3:60291967-60291986 None:intergenic 50.0%
CATACACAGGGGCGGTTCTA+AGG - Chr3:60295232-60295251 None:intergenic 55.0%
CATGCCCCAACCAACATCAG+TGG - Chr3:60294477-60294496 None:intergenic 55.0%
GAGGCCTAAAGCTGTCGTAC+AGG + Chr3:60295782-60295801 MsG0380014798.01.T01:intron 55.0%
TCCGAGATGGAGTTAGGGCA+GGG - Chr3:60291855-60291874 None:intergenic 55.0%
TTGGCGGAGAATTGGAGGGT+AGG - Chr3:60291566-60291585 None:intergenic 55.0%
! CACTGATGTTGGTTGGGGCA+TGG + Chr3:60294475-60294494 MsG0380014798.01.T01:CDS 55.0%
! CCACCCACTGATGTTGGTTG+GGG + Chr3:60294470-60294489 MsG0380014798.01.T01:CDS 55.0%
! TGATGTTGGTTGGGGCATGG+AGG + Chr3:60294478-60294497 MsG0380014798.01.T01:CDS 55.0%
CCCCAACCAACATCAGTGGG+TGG - Chr3:60294473-60294492 None:intergenic 60.0%
CCCCTGCCCTAACTCCATCT+CGG + Chr3:60291851-60291870 MsG0380014798.01.T01:CDS 60.0%
CCGAGATGGAGTTAGGGCAG+GGG - Chr3:60291854-60291873 None:intergenic 60.0%
GTCCGAGATGGAGTTAGGGC+AGG - Chr3:60291856-60291875 None:intergenic 60.0%
!! ACAGGGGCGGTTCTAAGGCC+CGG - Chr3:60295227-60295246 None:intergenic 65.0%
!! GTTCTAAGGCCCGGCGAGCC+CGG - Chr3:60295218-60295237 None:intergenic 70.0%
!! TTCTAAGGCCCGGCGAGCCC+GGG - Chr3:60295217-60295236 None:intergenic 70.0%
! CCGGAGCCCGGGCGAGTGCC+CGG + Chr3:60295196-60295215 MsG0380014798.01.T01:intron 85.0%
! CCGGGCACTCGCCCGGGCTC+CGG - Chr3:60295199-60295218 None:intergenic 85.0%
! CGGAGCCCGGGCGAGTGCCC+GGG + Chr3:60295197-60295216 MsG0380014798.01.T01:intron 85.0%
! GCGAGCCCGGGCACTCGCCC+GGG - Chr3:60295205-60295224 None:intergenic 85.0%
! GGCGAGCCCGGGCACTCGCC+CGG - Chr3:60295206-60295225 None:intergenic 85.0%
! GGCGAGTGCCCGGGCTCGCC+GGG + Chr3:60295206-60295225 MsG0380014798.01.T01:intron 85.0%
! GGGCGAGTGCCCGGGCTCGC+CGG + Chr3:60295205-60295224 MsG0380014798.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr3 gene 60291547 60296269 60291547 ID=MsG0380014798.01;Name=MsG0380014798.01
Chr3 mRNA 60291547 60296269 60291547 ID=MsG0380014798.01.T01;Parent=MsG0380014798.01;Name=MsG0380014798.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0|0|1|1|1|3|0|326
Chr3 exon 60291547 60291983 60291547 ID=MsG0380014798.01.T01:exon:1772;Parent=MsG0380014798.01.T01
Chr3 exon 60294325 60294640 60294325 ID=MsG0380014798.01.T01:exon:1773;Parent=MsG0380014798.01.T01
Chr3 exon 60296042 60296269 60296042 ID=MsG0380014798.01.T01:exon:1774;Parent=MsG0380014798.01.T01
Chr3 CDS 60291547 60291983 60291547 ID=MsG0380014798.01.T01:cds;Parent=MsG0380014798.01.T01
Chr3 CDS 60294325 60294640 60294325 ID=MsG0380014798.01.T01:cds;Parent=MsG0380014798.01.T01
Chr3 CDS 60296042 60296269 60296042 ID=MsG0380014798.01.T01:cds;Parent=MsG0380014798.01.T01
Gene Sequence

>MsG0380014798.01.T01

ATGAACAACTTGGATTCCTACCCTCCAATTCTCCGCCAACACAATAACCAACCACAAAACCTTTATGTCCCAAATGACATAGTTGAAGACTCAGATCCTATTCCAATCATAGATCTCAAGTGCTTAGAACACAAAAATTTGGATGAGGCTTGCAAGGAATGGGGTCTATTCCGTTTGGTTAATCATGGTGTTCCAATAACCCTTTTGGAACAACTTCAAGATTTAACCAAACAACTATTTTCTTTGTCCTTTGAATCAAAACAAGAAGCATGCAATGAAAGCCCTATCAAATACTTTTGGGGTACCCCTGCCCTAACTCCATCTCGGACAGCAATAACAAAAGGTCCTCAAAATATCAATTGGGTTGAAGGTTTTGATGTGCCATTGTGTCAACTCTCTCACTTCCAACATCAACTTCCTTCACTCGAGTCCATCAGGCTTTTACTAATGGAATATGCAACCCATCTTTCAAGAATTGCTACAACTTTATTTGAAGCAATGGTTAAGAATCTTGAGCTGAATCACAAAACAACAAAGTCATATTTATCAGAAAACACAGGCATCATACGTGTATATCGTTATCCACCCACTGATGTTGGTTGGGGCATGGAGGTTCATACAGATAGTTCAGTTTTGTCCATATTGAACCCAGATGACCATGTGAGTGGACTTCAAGTTCTCAAAGATGATCAATGGCTCACTGTAAAGCCAGCTTCCAACACATTGATTGTCAACCTTGGTGACATGATGCAGGCGATTAGCAGCGATAGATACAAGAGTGTGTCACATAGAGTGAAGGTAGAGAAAGATATAGAGAGGATCTCAATATGCTACTTTGTATTTCCTGGTGAAGACGTTGTGATTGAGAGCAACAAGTACAAGCCATTTACCTACAATGAATTCAGGGCACAAGTGCAACAAGACATCAAAACCCTTGGAAATAAAGTTGGGCTTTCAAGGTTTCAGCAGAACCAAGGCTAA
Protein sequence

>MsG0380014798.01.T01

MNNLDSYPPILRQHNNQPQNLYVPNDIVEDSDPIPIIDLKCLEHKNLDEACKEWGLFRLVNHGVPITLLEQLQDLTKQLFSLSFESKQEACNESPIKYFWGTPALTPSRTAITKGPQNINWVEGFDVPLCQLSHFQHQLPSLESIRLLLMEYATHLSRIATTLFEAMVKNLELNHKTTKSYLSENTGIIRVYRYPPTDVGWGMEVHTDSSVLSILNPDDHVSGLQVLKDDQWLTVKPASNTLIVNLGDMMQAISSDRYKSVSHRVKVEKDIERISICYFVFPGEDVVIESNKYKPFTYNEFRAQVQQDIKTLGNKVGLSRFQQNQG*