AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015302.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015302.01.T01 MTR_3g067685 98.734 395 5 0 1 395 1 395 0.0 786
MsG0380015302.01.T01 MTR_5g079550 74.176 364 93 1 33 395 12 375 9.46e-180 504
MsG0380015302.01.T01 MTR_5g069340 45.151 299 161 2 48 344 41 338 2.41e-71 228
MsG0380015302.01.T01 MTR_6g004790 35.294 323 192 8 48 360 9 324 9.91e-45 157
MsG0380015302.01.T01 MTR_3g103050 33.133 332 203 8 5 325 10 333 6.87e-35 132
MsG0380015302.01.T01 MTR_1g018180 31.692 325 212 6 3 325 23 339 4.31e-32 124
MsG0380015302.01.T01 MTR_7g097020 32.759 290 187 5 31 318 472 755 3.24e-31 126
MsG0380015302.01.T01 MTR_3g466220 32.857 280 180 5 41 318 553 826 4.15e-31 125
MsG0380015302.01.T01 MTR_3g466220 32.857 280 180 5 41 318 532 805 4.47e-31 125
MsG0380015302.01.T01 MTR_3g106140 30.286 350 208 9 56 375 126 469 1.88e-29 119
MsG0380015302.01.T01 MTR_4g063800 33.333 273 175 5 45 315 357 624 4.91e-29 119
MsG0380015302.01.T01 MTR_7g059405 32.061 262 169 5 58 317 378 632 3.40e-27 114
MsG0380015302.01.T01 MTR_8g080280 33.462 260 158 6 81 331 474 727 1.56e-26 112
MsG0380015302.01.T01 MTR_2g018010 32.500 280 178 7 45 318 400 674 9.15e-26 109
MsG0380015302.01.T01 MTR_1g014420 32.364 275 169 7 56 318 144 413 1.07e-25 108
MsG0380015302.01.T01 MTR_2g026130 32.000 275 146 5 85 320 179 451 4.28e-23 100
MsG0380015302.01.T01 MTR_1g069845 29.433 282 153 5 78 318 320 596 6.47e-23 101
MsG0380015302.01.T01 MTR_1g069845 30.035 283 150 6 78 318 441 717 7.74e-23 101
MsG0380015302.01.T01 MTR_1g069845 30.035 283 150 6 78 318 437 713 9.44e-23 100
MsG0380015302.01.T01 MTR_3g085610 34.211 228 137 6 97 319 489 708 5.89e-20 92.4
MsG0380015302.01.T01 MTR_5g083030 30.072 276 183 8 48 317 412 683 2.32e-19 90.5
MsG0380015302.01.T01 MTR_5g083030 28.409 176 122 3 124 298 406 578 4.34e-11 65.1
MsG0380015302.01.T01 MTR_4g485520 27.046 281 160 4 80 319 372 648 1.90e-18 87.8
MsG0380015302.01.T01 MTR_4g485520 27.046 281 160 4 80 319 204 480 1.99e-18 87.4
MsG0380015302.01.T01 MTR_7g078330 29.455 275 175 6 54 320 380 643 7.50e-18 85.9
MsG0380015302.01.T01 MTR_1g094215 25.979 281 161 5 80 318 161 436 2.86e-16 80.5
MsG0380015302.01.T01 MTR_1g094215 25.979 281 161 5 80 318 344 619 4.81e-16 80.5
MsG0380015302.01.T01 MTR_3g078160 27.622 286 193 10 48 325 385 664 1.98e-14 75.5
MsG0380015302.01.T01 MTR_3g078160 27.622 286 193 10 48 325 385 664 2.12e-14 75.5
MsG0380015302.01.T01 MTR_4g107010 27.875 287 181 10 48 319 390 665 4.67e-14 74.3
MsG0380015302.01.T01 MTR_8g077205 26.816 179 126 2 141 319 536 709 2.40e-13 72.0
MsG0380015302.01.T01 MTR_8g077205 26.816 179 126 2 141 319 424 597 2.40e-13 72.0
MsG0380015302.01.T01 MTR_7g053260 27.778 270 179 9 58 318 188 450 5.58e-13 70.5
MsG0380015302.01.T01 MTR_5g020570 25.616 203 143 3 128 326 535 733 2.25e-12 69.3
MsG0380015302.01.T01 MTR_5g020570 25.616 203 143 3 128 326 520 718 2.29e-12 69.3
MsG0380015302.01.T01 MTR_7g116600 25.735 272 187 5 59 321 189 454 2.50e-12 68.6
MsG0380015302.01.T01 MTR_2g011140 25.461 271 181 8 56 318 122 379 4.57e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015302.01.T01 AT3G03440 70.920 337 96 2 41 375 66 402 8.42e-148 425
MsG0380015302.01.T01 AT4G12710 47.164 335 169 5 51 378 57 390 9.43e-80 251
MsG0380015302.01.T01 AT5G14510 36.137 321 190 8 48 360 9 322 9.90e-42 150
MsG0380015302.01.T01 AT2G23140 32.857 280 180 5 41 318 354 627 2.82e-35 137
MsG0380015302.01.T01 AT2G23140 32.857 280 180 5 41 318 354 627 2.82e-35 137
MsG0380015302.01.T01 AT2G23140 32.857 280 180 5 41 318 543 816 5.18e-35 137
MsG0380015302.01.T01 AT2G23140 32.857 280 180 5 41 318 543 816 5.18e-35 137
MsG0380015302.01.T01 AT2G23140 32.857 280 180 5 41 318 546 819 5.66e-35 137
MsG0380015302.01.T01 AT3G01400 34.815 270 166 6 58 325 82 343 2.03e-33 128
MsG0380015302.01.T01 AT5G67340 33.808 281 177 6 41 318 423 697 5.55e-31 125
MsG0380015302.01.T01 AT5G67340 33.808 281 177 6 41 318 423 697 5.55e-31 125
MsG0380015302.01.T01 AT5G58680 34.586 266 164 7 58 319 80 339 2.67e-30 119
MsG0380015302.01.T01 AT3G54790 33.929 280 176 6 48 324 445 718 2.81e-30 123
MsG0380015302.01.T01 AT3G54790 33.929 280 176 6 48 324 481 754 3.99e-30 122
MsG0380015302.01.T01 AT3G54790 33.929 280 176 6 48 324 481 754 3.99e-30 122
MsG0380015302.01.T01 AT2G25130 34.657 277 156 8 54 318 132 395 1.48e-27 114
MsG0380015302.01.T01 AT1G71020 33.451 284 182 6 40 320 194 473 1.81e-26 110
MsG0380015302.01.T01 AT1G71020 33.451 284 182 6 40 320 342 621 3.02e-26 111
MsG0380015302.01.T01 AT1G29340 31.288 326 202 11 12 327 384 697 1.72e-25 109
MsG0380015302.01.T01 AT4G31890 34.182 275 163 8 56 318 160 428 2.82e-25 107
MsG0380015302.01.T01 AT4G31890 34.182 275 163 8 56 318 160 428 2.82e-25 107
MsG0380015302.01.T01 AT4G31890 34.182 275 163 8 56 318 160 428 2.82e-25 107
MsG0380015302.01.T01 AT1G67530 30.986 284 177 7 54 326 439 714 2.25e-24 105
MsG0380015302.01.T01 AT1G67530 30.986 284 177 7 54 326 439 714 2.25e-24 105
MsG0380015302.01.T01 AT1G67530 30.986 284 177 7 54 326 439 714 2.25e-24 105
MsG0380015302.01.T01 AT3G46510 31.852 270 177 5 48 315 361 625 2.56e-24 105
MsG0380015302.01.T01 AT4G16490 30.175 285 149 6 85 326 189 466 1.95e-23 102
MsG0380015302.01.T01 AT1G24330 32.031 256 155 7 84 329 475 721 1.18e-22 100
MsG0380015302.01.T01 AT1G24330 32.031 256 155 7 84 329 475 721 1.18e-22 100
MsG0380015302.01.T01 AT3G54850 31.541 279 182 6 45 320 351 623 3.56e-21 95.9
MsG0380015302.01.T01 AT1G23030 27.046 281 161 5 81 320 333 610 7.71e-20 92.0
MsG0380015302.01.T01 AT1G27910 29.900 301 192 10 31 319 411 704 9.48e-19 89.0
MsG0380015302.01.T01 AT2G28830 27.306 271 188 7 48 314 292 557 1.30e-18 88.2
MsG0380015302.01.T01 AT5G42340 28.114 281 161 6 79 320 379 657 9.80e-17 82.4
MsG0380015302.01.T01 AT3G07360 27.407 270 183 6 59 320 54 318 6.03e-15 75.5
MsG0380015302.01.T01 AT3G07360 27.407 270 183 6 59 320 54 318 6.03e-15 75.5
MsG0380015302.01.T01 AT3G07360 27.407 270 183 6 59 320 54 318 6.03e-15 75.5
MsG0380015302.01.T01 AT3G07360 27.407 270 183 6 59 320 54 318 6.03e-15 75.5
MsG0380015302.01.T01 AT3G07360 27.407 270 183 6 59 320 54 318 6.03e-15 75.5
MsG0380015302.01.T01 AT3G07360 27.407 270 183 6 59 320 54 318 6.03e-15 75.5
MsG0380015302.01.T01 AT3G07360 27.407 270 183 6 59 320 54 318 6.03e-15 75.5
MsG0380015302.01.T01 AT3G07360 27.407 270 183 6 59 320 54 318 6.03e-15 75.5
MsG0380015302.01.T01 AT3G07360 27.407 270 183 6 59 320 54 318 6.03e-15 75.5
MsG0380015302.01.T01 AT3G07360 27.407 270 183 6 59 320 189 453 8.43e-15 76.3
MsG0380015302.01.T01 AT5G62560 27.239 268 171 9 63 318 258 513 1.22e-14 75.9
MsG0380015302.01.T01 AT5G65200 26.740 273 174 8 63 319 248 510 1.06e-12 70.1
MsG0380015302.01.T01 AT1G60190 29.043 303 198 12 30 319 366 664 1.34e-12 69.7
MsG0380015302.01.T01 AT4G21350 25.833 240 167 5 56 292 111 342 7.80e-11 63.5

Find 119 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAATAATGCTAAGATTATT+AGG 0.163725 3:-68152757 None:intergenic
GCACCACAACCACTAATAAT+TGG 0.238920 3:-68152646 None:intergenic
CCCTCCTTCCCATGAATAAT+TGG 0.239502 3:-68149526 None:intergenic
TCAGAAGCACAGCCAGCTAT+AGG 0.347463 3:-68153330 None:intergenic
TTCAAGCCGCACGTGATATC+AGG 0.350450 3:+68149652 MsG0380015302.01.T01:CDS
CTTAGAGAAGGTGTCATTCC+AGG 0.355536 3:+68153039 MsG0380015302.01.T01:CDS
ATCAACAAACCAATTATTAG+TGG 0.366264 3:+68152637 MsG0380015302.01.T01:CDS
CAACAGCATGTTCCCTACTT+TGG 0.373828 3:-68152963 None:intergenic
CCTCCTCCTCCAATTATTCA+TGG 0.379335 3:+68149517 MsG0380015302.01.T01:CDS
ATGACACCTTCTCTAAGAAT+TGG 0.389433 3:-68153033 None:intergenic
GAGCACGACGGACGGCTAAC+GGG 0.401496 3:-68149593 None:intergenic
CAGAAGCACAGCCAGCTATA+GGG 0.409997 3:-68153329 None:intergenic
ATTCTCTTAGTAGTTGCAAA+AGG 0.416206 3:-68153116 None:intergenic
TGGATTTCAGATCTTGGATA+AGG 0.427057 3:-68153141 None:intergenic
TCGGGTTGGATTTCAGATCT+TGG 0.431604 3:-68153147 None:intergenic
GAGGAGGAGGAACAGGAGGA+AGG 0.436210 3:-68149501 None:intergenic
AAAGTGATCGATGTAAATAC+AGG 0.437224 3:+68153007 MsG0380015302.01.T01:CDS
GAACAGGAGGAAGGTGAATG+AGG 0.441315 3:-68149492 None:intergenic
TTTATCTCACAAACCCCAAA+TGG 0.442137 3:-68153417 None:intergenic
TTCTATGCTCCGAGTCGACT+CGG 0.444577 3:+68149737 MsG0380015302.01.T01:CDS
GAATAATGCTAAGATTATTA+GGG 0.451130 3:-68152756 None:intergenic
AAACCAATTATTAGTGGTTG+TGG 0.453019 3:+68152643 MsG0380015302.01.T01:CDS
TGCTTTGATAGAACCCTTGG+TGG 0.454606 3:+68152858 MsG0380015302.01.T01:CDS
CCAGCTATAGGGAGATCACT+TGG 0.456109 3:-68153318 None:intergenic
ATATCAACTATGTGAGGGAT+TGG 0.465329 3:-68152790 None:intergenic
GCTCTTCAGCTTCTTAAATC+CGG 0.467072 3:+68149612 MsG0380015302.01.T01:CDS
CTGCATCAGCTTTCGCCTGT+GGG 0.467126 3:-68152705 None:intergenic
GTCAGATAATCTAAATCTGC+AGG 0.467151 3:+68152573 MsG0380015302.01.T01:CDS
AAAATCAATATTGTGGAGGC+TGG 0.467906 3:+68152520 MsG0380015302.01.T01:CDS
CTCTAAGAATCTCGACAAGA+AGG 0.481238 3:-68152675 None:intergenic
AAAACGGCACTCTCCAAAGT+AGG 0.483193 3:+68152950 MsG0380015302.01.T01:CDS
TGAATAATTGGAGGAGGAGG+AGG 0.484728 3:-68149514 None:intergenic
CTACTTGAGCTCACTGTACA+AGG 0.484972 3:+68153063 MsG0380015302.01.T01:CDS
CTCGGTTGAGTCTCATGAAC+CGG 0.490645 3:+68149755 MsG0380015302.01.T01:CDS
ACTATATTCTCAAGAGTGTC+GGG 0.493669 3:-68153165 None:intergenic
ACCTCCACAATGGCCTGGAC+TGG 0.494679 3:-68153491 None:intergenic
AAAGAAAATGCTAGCTGAGA+TGG 0.495708 3:+68153236 MsG0380015302.01.T01:CDS
TACTATATTCTCAAGAGTGT+CGG 0.498640 3:-68153166 None:intergenic
GTCGTGGAGGTTCTTGAAAA+CGG 0.500560 3:+68152934 MsG0380015302.01.T01:CDS
TGTATTTACATCGATCACTT+TGG 0.506488 3:-68153005 None:intergenic
ACATCATATCTCAAATTGAC+GGG 0.506554 3:+68153193 MsG0380015302.01.T01:CDS
AGGGTAGAGGTTATTTAGAG+AGG 0.510276 3:-68149423 None:intergenic
CCAAGTGATCTCCCTATAGC+TGG 0.512340 3:+68153318 MsG0380015302.01.T01:CDS
AAAATTGCTTACAATAGTAA+AGG 0.514770 3:+68153602 MsG0380015302.01.T01:three_prime_UTR
ACTGCATCAGCTTTCGCCTG+TGG 0.515865 3:-68152706 None:intergenic
TCTGAGGCATTTACAGCAAA+GGG 0.516038 3:+68153281 MsG0380015302.01.T01:CDS
ACGATTTGAAGGTAGGGTAG+AGG 0.516435 3:-68149436 None:intergenic
TAGATACCTCCACAATGGCC+TGG 0.524367 3:-68153496 None:intergenic
GCTTCTTAAATCCGGCGTGC+CGG 0.525457 3:+68149620 MsG0380015302.01.T01:CDS
TGCAAGAATACCACCTTCCT+CGG 0.525981 3:-68152911 None:intergenic
TTAAGCAAAGCAAGAAGAGC+CGG 0.529207 3:-68149774 None:intergenic
TTCTCTTAGTAGTTGCAAAA+GGG 0.529464 3:-68153115 None:intergenic
ATTGACGGGGATGATCAATC+TGG 0.531432 3:+68153207 MsG0380015302.01.T01:CDS
GTCTGAGGCATTTACAGCAA+AGG 0.533397 3:+68153280 MsG0380015302.01.T01:CDS
ACAGTGAGCTCAAGTAGTCC+TGG 0.534417 3:-68153057 None:intergenic
AGAGCACGACGGACGGCTAA+CGG 0.537195 3:-68149594 None:intergenic
CAGCTATAGGGAGATCACTT+GGG 0.537530 3:-68153317 None:intergenic
GATTTAGATTATCTGACTTG+AGG 0.540482 3:-68152567 None:intergenic
TCTAAGAATCTCGACAAGAA+GGG 0.542061 3:-68152674 None:intergenic
CCATGAATAATTGGAGGAGG+AGG 0.543600 3:-68149517 None:intergenic
AATCCGGCGTGCCGGAGTTG+CGG 0.545098 3:+68149628 MsG0380015302.01.T01:CDS
CTCCTCCTCCAATTATTCAT+GGG 0.546122 3:+68149518 MsG0380015302.01.T01:CDS
GGCGAAAGCTGATGCAGTGA+TGG 0.548563 3:+68152711 MsG0380015302.01.T01:CDS
TCCTTCCCATGAATAATTGG+AGG 0.550242 3:-68149523 None:intergenic
GACTTGAGGAAACTAAGTAT+TGG 0.552250 3:-68152553 None:intergenic
TCCAATTATTCATGGGAAGG+AGG 0.552701 3:+68149525 MsG0380015302.01.T01:CDS
ACCACCTTCCTCGGATGTCA+AGG 0.553959 3:-68152902 None:intergenic
TTGTGCTTTGATAGAACCCT+TGG 0.555673 3:+68152855 MsG0380015302.01.T01:CDS
CAAAGTAGGGAACATGCTGT+TGG 0.556934 3:+68152964 MsG0380015302.01.T01:CDS
GCGGCTTGAAGCCGCAACTC+CGG 0.558749 3:-68149639 None:intergenic
TATTCTCAAGAGTGTCGGGT+TGG 0.560573 3:-68153161 None:intergenic
TCCTCCAATTATTCATGGGA+AGG 0.564127 3:+68149522 MsG0380015302.01.T01:CDS
AATTGGTTTGTTGATTGAAG+AGG 0.565249 3:-68152629 None:intergenic
TCTATAATAATTGTGTCGGT+AGG 0.566656 3:-68149552 None:intergenic
CCAATTATTCATGGGAAGGA+GGG 0.567446 3:+68149526 MsG0380015302.01.T01:CDS
ATTATGAATTATGCCAGTCC+AGG 0.570094 3:+68153478 MsG0380015302.01.T01:three_prime_UTR
TTGTGGAGGTATCTAGTGAC+TGG 0.570735 3:+68153504 MsG0380015302.01.T01:three_prime_UTR
CAGGAATAAAATCAATATTG+TGG 0.571152 3:+68152513 MsG0380015302.01.T01:intron
AGCTTCTATAATAATTGTGT+CGG 0.572699 3:-68149556 None:intergenic
AGGTGGTATTCTTGCAGTCG+TGG 0.573719 3:+68152918 MsG0380015302.01.T01:CDS
TTGTAAGACATTAAGAAACA+TGG 0.576017 3:+68153546 MsG0380015302.01.T01:three_prime_UTR
CTAAGAATCTCGACAAGAAG+GGG 0.576621 3:-68152673 None:intergenic
TCTTAGAGACGGAAGCCCAC+AGG 0.580593 3:+68152690 MsG0380015302.01.T01:CDS
TGAGGATATCAACTATGTGA+GGG 0.581995 3:-68152795 None:intergenic
TTCCCATGAATAATTGGAGG+AGG 0.585638 3:-68149520 None:intergenic
AGCACGACGGACGGCTAACG+GGG 0.589929 3:-68149592 None:intergenic
TTGAGGATATCAACTATGTG+AGG 0.590212 3:-68152796 None:intergenic
GAGACTCAACCGAGTCGACT+CGG 0.590880 3:-68149746 None:intergenic
TATGCCAGTCCAGGCCATTG+TGG 0.592164 3:+68153487 MsG0380015302.01.T01:three_prime_UTR
AATCTCGACAAGAAGGGGAA+TGG 0.600844 3:-68152668 None:intergenic
AAGCTGAAGAGCACGACGGA+CGG 0.604497 3:-68149601 None:intergenic
CGTCAGTTGTCTGAAGCTGT+CGG 0.607472 3:+68149705 MsG0380015302.01.T01:CDS
CGAAAACATCACAGAGGTGT+CGG 0.611962 3:+68149682 MsG0380015302.01.T01:CDS
AACATCATATCTCAAATTGA+CGG 0.612026 3:+68153192 MsG0380015302.01.T01:CDS
GCCAGTCCAGGCCATTGTGG+AGG 0.613077 3:+68153490 MsG0380015302.01.T01:three_prime_UTR
AAGCCGCAACTCCGGCACGC+CGG 0.613231 3:-68149631 None:intergenic
AGGGAACCAATTCTTAGAGA+AGG 0.613278 3:+68153027 MsG0380015302.01.T01:CDS
CTTGTCGAGATTCTTAGAGA+CGG 0.615547 3:+68152679 MsG0380015302.01.T01:CDS
TTTCTCTCACCTCTTCACAA+TGG 0.622249 3:+68149464 MsG0380015302.01.T01:exon
AAACGGCACTCTCCAAAGTA+GGG 0.624721 3:+68152951 MsG0380015302.01.T01:CDS
ACCGCCTTGACATCCGAGGA+AGG 0.627307 3:+68152898 MsG0380015302.01.T01:CDS
AGCTATAGGGAGATCACTTG+GGG 0.628255 3:-68153316 None:intergenic
AAGTTTCCTGATATCACGTG+CGG 0.638608 3:-68149658 None:intergenic
TGGTATTCTTGCAGTCGTGG+AGG 0.644268 3:+68152921 MsG0380015302.01.T01:CDS
GAATAAAATCAATATTGTGG+AGG 0.645985 3:+68152516 MsG0380015302.01.T01:CDS
CATTCATCATAATCCACCAA+GGG 0.647888 3:-68152871 None:intergenic
CAGAACCGCCTTGACATCCG+AGG 0.651171 3:+68152894 MsG0380015302.01.T01:CDS
AAGTGATCGATGTAAATACA+GGG 0.660329 3:+68153008 MsG0380015302.01.T01:CDS
CATCATATCTCAAATTGACG+GGG 0.663210 3:+68153194 MsG0380015302.01.T01:CDS
TGAGATGGTTCAAGTCAGCA+TGG 0.664334 3:+68153251 MsG0380015302.01.T01:CDS
GCATTCATCATAATCCACCA+AGG 0.668148 3:-68152872 None:intergenic
TCAGCATGGAACAAAGTCTG+AGG 0.668450 3:+68153265 MsG0380015302.01.T01:CDS
ACCTTCCTCGGATGTCAAGG+CGG 0.668607 3:-68152899 None:intergenic
CGGACGGCTAACGGGGTCTG+CGG 0.676544 3:-68149585 None:intergenic
GAGGAGTGTCCATTGTGAAG+AGG 0.676784 3:-68149473 None:intergenic
GTCACTAGATACCTCCACAA+TGG 0.692250 3:-68153501 None:intergenic
GCCTTGACATCCGAGGAAGG+TGG 0.736934 3:+68152901 MsG0380015302.01.T01:CDS
TAAGAAGCTGAAGAGCACGA+CGG 0.746959 3:-68149605 None:intergenic
AACTTACGAAAACATCACAG+AGG 0.790561 3:+68149676 MsG0380015302.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTTCTATAGAAAAAAA+AGG + Chr3:68153437-68153456 MsG0380015302.01.T01:three_prime_UTR 10.0%
!! AAATTTCTATAGAAAAAAAA+GGG + Chr3:68153438-68153457 MsG0380015302.01.T01:three_prime_UTR 10.0%
!! AAAAAAAAAGTTTATCCAAT+TGG + Chr3:68150888-68150907 MsG0380015302.01.T01:intron 15.0%
!! AATTCAATCATATTCATAAT+TGG + Chr3:68152480-68152499 MsG0380015302.01.T01:intron 15.0%
!! AATTGAATATATCTAAAAAG+TGG + Chr3:68151154-68151173 MsG0380015302.01.T01:intron 15.0%
!! CAAACAAAAAAAAAATCAAT+TGG + Chr3:68149860-68149879 MsG0380015302.01.T01:intron 15.0%
!!! AACAAACAAGATAATATTTT+TGG - Chr3:68152393-68152412 None:intergenic 15.0%
!!! ATTTGTATAAGAATTTTTCT+TGG + Chr3:68150346-68150365 MsG0380015302.01.T01:intron 15.0%
!!! GATAAACTTTTTTTTTTTAG+AGG - Chr3:68150884-68150903 None:intergenic 15.0%
!!! TATTTTCCTTTTATTTTTCA+TGG + Chr3:68150718-68150737 MsG0380015302.01.T01:intron 15.0%
!!! TTTTTTTGTGTATAGATTAT+TGG + Chr3:68149891-68149910 MsG0380015302.01.T01:intron 15.0%
!! AAAATTGCTTACAATAGTAA+AGG + Chr3:68153602-68153621 MsG0380015302.01.T01:three_prime_UTR 20.0%
!! AATTGAATGTATCTAAAAAG+TGG - Chr3:68151093-68151112 None:intergenic 20.0%
!! AGAATAATGCTAAGATTATT+AGG - Chr3:68152760-68152779 None:intergenic 20.0%
!! ATAGAAAAAAAAGGGAAAAA+AGG + Chr3:68153446-68153465 MsG0380015302.01.T01:three_prime_UTR 20.0%
!! GAAAATATAGAAAATTTGAG+TGG + Chr3:68150438-68150457 MsG0380015302.01.T01:intron 20.0%
!! GAATAATGCTAAGATTATTA+GGG - Chr3:68152759-68152778 None:intergenic 20.0%
!! GCAGAGATATTTAATAAATT+GGG + Chr3:68151272-68151291 MsG0380015302.01.T01:intron 20.0%
!! GGAAAAAAAAGAAAATGAAA+GGG - Chr3:68150391-68150410 None:intergenic 20.0%
!! GTAGGAAAAAAAAAATACAA+AGG - Chr3:68151227-68151246 None:intergenic 20.0%
!! TAGAAAAAAAAGGGAAAAAA+GGG + Chr3:68153447-68153466 MsG0380015302.01.T01:three_prime_UTR 20.0%
!! TGCAGAGATATTTAATAAAT+TGG + Chr3:68151271-68151290 MsG0380015302.01.T01:intron 20.0%
!! TGGAAAAAAAAGAAAATGAA+AGG - Chr3:68150392-68150411 None:intergenic 20.0%
!! TTAAAAGGAAAAGAAACAAA+AGG - Chr3:68150957-68150976 None:intergenic 20.0%
!!! AGATAGTTTGTTAAGAATAA+TGG + Chr3:68150525-68150544 MsG0380015302.01.T01:intron 20.0%
!!! ATTTTCTTAGAAATTTCTTG+TGG - Chr3:68149838-68149857 None:intergenic 20.0%
!!! CTTTTTTTTTTTAGAGGAAT+TGG - Chr3:68150878-68150897 None:intergenic 20.0%
!!! GAATTTTGATTTCTTTTGTT+TGG + Chr3:68152330-68152349 MsG0380015302.01.T01:intron 20.0%
!!! GATAGTTTGTTAAGAATAAT+GGG + Chr3:68150526-68150545 MsG0380015302.01.T01:intron 20.0%
!!! GTATCTTTTTTCCTTATTTT+TGG + Chr3:68153390-68153409 MsG0380015302.01.T01:three_prime_UTR 20.0%
!!! TTATTTTTGGTTTTCCATTT+GGG + Chr3:68153403-68153422 MsG0380015302.01.T01:three_prime_UTR 20.0%
!!! TTTTTTGCATAAGAATGATA+AGG + Chr3:68150167-68150186 MsG0380015302.01.T01:intron 20.0%
! AAAAAAAAATACAAAGGTGG+TGG - Chr3:68151221-68151240 None:intergenic 25.0%
! AAAGTAAAATTTAATTCCCC+TGG - Chr3:68151982-68152001 None:intergenic 25.0%
! AACATCATATCTCAAATTGA+CGG + Chr3:68153192-68153211 MsG0380015302.01.T01:CDS 25.0%
! AAGCCAAAACAAGAAATTTA+AGG - Chr3:68151642-68151661 None:intergenic 25.0%
! AATATGACATCAGAAAGAAT+TGG + Chr3:68150830-68150849 MsG0380015302.01.T01:intron 25.0%
! AGAAAGAAGATAAGCTTAAA+AGG - Chr3:68150972-68150991 None:intergenic 25.0%
! AGCTTCTATAATAATTGTGT+CGG - Chr3:68149559-68149578 None:intergenic 25.0%
! ATCAACAAACCAATTATTAG+TGG + Chr3:68152637-68152656 MsG0380015302.01.T01:CDS 25.0%
! CAAAAAGTTAATCAATACTG+TGG - Chr3:68152443-68152462 None:intergenic 25.0%
! CAAATGGAAAACCAAAAATA+AGG - Chr3:68153404-68153423 None:intergenic 25.0%
! CAGGAATAAAATCAATATTG+TGG + Chr3:68152513-68152532 MsG0380015302.01.T01:intron 25.0%
! GAATAAAATCAATATTGTGG+AGG + Chr3:68152516-68152535 MsG0380015302.01.T01:CDS 25.0%
! GGAAAAAAAAAATACAAAGG+TGG - Chr3:68151224-68151243 None:intergenic 25.0%
! TATGCGTGTTCAAAAATAAA+GGG + Chr3:68151375-68151394 MsG0380015302.01.T01:intron 25.0%
! TATTTAATAAATTGGGACAC+AGG + Chr3:68151279-68151298 MsG0380015302.01.T01:intron 25.0%
! TCTTATTCTTATGTCAAAGA+TGG - Chr3:68150584-68150603 None:intergenic 25.0%
! TGTTAAGTAGATAATCGTTT+GGG + Chr3:68152059-68152078 MsG0380015302.01.T01:intron 25.0%
! TTAATTCAATAACCACTTTG+CGG - Chr3:68151800-68151819 None:intergenic 25.0%
! TTATGCGTGTTCAAAAATAA+AGG + Chr3:68151374-68151393 MsG0380015302.01.T01:intron 25.0%
! TTGTAAGACATTAAGAAACA+TGG + Chr3:68153546-68153565 MsG0380015302.01.T01:three_prime_UTR 25.0%
! TTGTTAAGTAGATAATCGTT+TGG + Chr3:68152058-68152077 MsG0380015302.01.T01:intron 25.0%
!! AGGGGAATTAAATTTTACTT+TGG + Chr3:68151981-68152000 MsG0380015302.01.T01:intron 25.0%
!! ATCTGAAATAAAGAGCAAAA+AGG - Chr3:68152419-68152438 None:intergenic 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + Chr3:68151178-68151197 MsG0380015302.01.T01:intron 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG - Chr3:68151197-68151178 None:intergenic 25.0%
!!! CTTATTTTTGGTTTTCCATT+TGG + Chr3:68153402-68153421 MsG0380015302.01.T01:three_prime_UTR 25.0%
!!! TATTTTTGGTTTTCCATTTG+GGG + Chr3:68153404-68153423 MsG0380015302.01.T01:three_prime_UTR 25.0%
!!! TTTGTTAAGAATAATGGGTT+GGG + Chr3:68150531-68150550 MsG0380015302.01.T01:intron 25.0%
!!! TTTTAAGTAATAGTTGCACT+TGG + Chr3:68153359-68153378 MsG0380015302.01.T01:exon 25.0%
AAACCAATTATTAGTGGTTG+TGG + Chr3:68152643-68152662 MsG0380015302.01.T01:CDS 30.0%
AAAGTGATCGATGTAAATAC+AGG + Chr3:68153007-68153026 MsG0380015302.01.T01:CDS 30.0%
AAGAAAATCCACTATCCAAT+TGG - Chr3:68150906-68150925 None:intergenic 30.0%
AAGATGCAAGAAACTAATCA+TGG - Chr3:68152221-68152240 None:intergenic 30.0%
AAGTGATCGATGTAAATACA+GGG + Chr3:68153008-68153027 MsG0380015302.01.T01:CDS 30.0%
AAGTTTATCCAATTGGATAG+TGG + Chr3:68150895-68150914 MsG0380015302.01.T01:intron 30.0%
ACAGAAAAACACCAATTTCA+TGG - Chr3:68150696-68150715 None:intergenic 30.0%
ACATCATATCTCAAATTGAC+GGG + Chr3:68153193-68153212 MsG0380015302.01.T01:CDS 30.0%
ATGAGAACAATTAGAACCTT+AGG - Chr3:68151009-68151028 None:intergenic 30.0%
ATTCTCTTAGTAGTTGCAAA+AGG - Chr3:68153119-68153138 None:intergenic 30.0%
CATAACAAAAATGTAGGGTA+GGG - Chr3:68151543-68151562 None:intergenic 30.0%
CTTAACAAACTATCTAGTCT+AGG - Chr3:68150520-68150539 None:intergenic 30.0%
CTTGGCATAACAAAAATGTA+GGG - Chr3:68151548-68151567 None:intergenic 30.0%
GAAAATCACTTTCATGCTAT+GGG + Chr3:68151467-68151486 MsG0380015302.01.T01:intron 30.0%
TAAGCAAAGTCATGAAAAAG+TGG - Chr3:68150610-68150629 None:intergenic 30.0%
TCCTCACCATGAAAAATAAA+AGG - Chr3:68150727-68150746 None:intergenic 30.0%
TCTACAACTCAGATGATAAA+AGG + Chr3:68151247-68151266 MsG0380015302.01.T01:intron 30.0%
TGTATTTACATCGATCACTT+TGG - Chr3:68153008-68153027 None:intergenic 30.0%
TGTGTATAGATTATTGGTAG+TGG + Chr3:68149897-68149916 MsG0380015302.01.T01:intron 30.0%
TTCTCTTAGTAGTTGCAAAA+GGG - Chr3:68153118-68153137 None:intergenic 30.0%
TTGCATAATCAATTCCTTTC+TGG + Chr3:68150271-68150290 MsG0380015302.01.T01:intron 30.0%
TTGCATACAAGTAGCATATA+CGG + Chr3:68150298-68150317 MsG0380015302.01.T01:intron 30.0%
! AAGTTTTACGATTTGAAGGT+AGG - Chr3:68149446-68149465 None:intergenic 30.0%
! AATGAATAATAAGAGTGCAG+AGG - Chr3:68152011-68152030 None:intergenic 30.0%
! ACCTTTTGCCTCTAATAAAA+GGG - Chr3:68151896-68151915 None:intergenic 30.0%
! AGTTTTACGATTTGAAGGTA+GGG - Chr3:68149445-68149464 None:intergenic 30.0%
! CATTTACACCTCACAAATTT+TGG - Chr3:68151498-68151517 None:intergenic 30.0%
! GAGAAAGTTTTACGATTTGA+AGG - Chr3:68149450-68149469 None:intergenic 30.0%
! GATTTAGATTATCTGACTTG+AGG - Chr3:68152570-68152589 None:intergenic 30.0%
! GGAGTATTTATTTCTTTGCT+AGG - Chr3:68151852-68151871 None:intergenic 30.0%
! TAACCTCTTTTCTTTTTCCA+AGG - Chr3:68151357-68151376 None:intergenic 30.0%
! TACTATATTCTCAAGAGTGT+CGG - Chr3:68153169-68153188 None:intergenic 30.0%
! TCTATAATAATTGTGTCGGT+AGG - Chr3:68149555-68149574 None:intergenic 30.0%
!! AATTGGTTTGTTGATTGAAG+AGG - Chr3:68152632-68152651 None:intergenic 30.0%
!! AGCTTACTTTTCATCTTTGA+CGG - Chr3:68149805-68149824 None:intergenic 30.0%
!! CTTTTTCATGACTTTGCTTA+TGG + Chr3:68150610-68150629 MsG0380015302.01.T01:intron 30.0%
!! GTTTGTTAAGAATAATGGGT+TGG + Chr3:68150530-68150549 MsG0380015302.01.T01:intron 30.0%
!! TAGATGCTTTTTGAGAAGAA+AGG + Chr3:68151690-68151709 MsG0380015302.01.T01:intron 30.0%
!! TGATTAGTTTCTTGCATCTT+AGG + Chr3:68152221-68152240 MsG0380015302.01.T01:intron 30.0%
!! TGGCCTTAAATTTCTTGTTT+TGG + Chr3:68151636-68151655 MsG0380015302.01.T01:intron 30.0%
!! TGGTATATCATGTTGCTTTA+TGG + Chr3:68152350-68152369 MsG0380015302.01.T01:intron 30.0%
!! TTGTTAAGAATAATGGGTTG+GGG + Chr3:68150532-68150551 MsG0380015302.01.T01:intron 30.0%
!!! AAGAAACATGGTTTTGTAGT+TGG + Chr3:68153558-68153577 MsG0380015302.01.T01:three_prime_UTR 30.0%
!!! ATTGGATAGTGGATTTTCTT+TGG + Chr3:68150906-68150925 MsG0380015302.01.T01:intron 30.0%
!!! TCCTTTTATTTTTCATGGTG+AGG + Chr3:68150723-68150742 MsG0380015302.01.T01:intron 30.0%
!!! TGAACGTGCTTTTGATTTAT+GGG + Chr3:68149963-68149982 MsG0380015302.01.T01:intron 30.0%
!!! TTGAACGTGCTTTTGATTTA+TGG + Chr3:68149962-68149981 MsG0380015302.01.T01:intron 30.0%
AAAATCAATATTGTGGAGGC+TGG + Chr3:68152520-68152539 MsG0380015302.01.T01:CDS 35.0%
AAAGAAAATGCTAGCTGAGA+TGG + Chr3:68153236-68153255 MsG0380015302.01.T01:CDS 35.0%
AACTTACGAAAACATCACAG+AGG + Chr3:68149676-68149695 MsG0380015302.01.T01:CDS 35.0%
AATTTCAATCACACCCTAGA+AGG - Chr3:68152259-68152278 None:intergenic 35.0%
ACAAGTAGCATATACGGTTT+AGG + Chr3:68150304-68150323 MsG0380015302.01.T01:intron 35.0%
ACCAATGAGATGCAAAGATA+TGG - Chr3:68150412-68150431 None:intergenic 35.0%
ACCAGATTTCAAATATGGAC+CGG + Chr3:68152085-68152104 MsG0380015302.01.T01:intron 35.0%
ACCTATATGCAAAACAAGCA+TGG + Chr3:68151616-68151635 MsG0380015302.01.T01:intron 35.0%
AGAATGATAAGGAGAAGACA+TGG + Chr3:68150178-68150197 MsG0380015302.01.T01:intron 35.0%
ATAAAGGGAAAGTGAGAGTA+CGG + Chr3:68151390-68151409 MsG0380015302.01.T01:intron 35.0%
ATATCAACTATGTGAGGGAT+TGG - Chr3:68152793-68152812 None:intergenic 35.0%
ATCACAAGATTGTTAAGCCA+GGG + Chr3:68151962-68151981 MsG0380015302.01.T01:intron 35.0%
ATGACTTTGCTTATGGTACT+TGG + Chr3:68150617-68150636 MsG0380015302.01.T01:intron 35.0%
ATGCAAAAAACGCTATGCTT+AGG - Chr3:68150157-68150176 None:intergenic 35.0%
ATTATGAATTATGCCAGTCC+AGG + Chr3:68153478-68153497 MsG0380015302.01.T01:three_prime_UTR 35.0%
CAGAAGATAAGCCATGAAAT+TGG + Chr3:68150682-68150701 MsG0380015302.01.T01:intron 35.0%
CATATAGGTAGTAGATGAGA+GGG - Chr3:68151605-68151624 None:intergenic 35.0%
CATCATATCTCAAATTGACG+GGG + Chr3:68153194-68153213 MsG0380015302.01.T01:CDS 35.0%
CATCTTAGTTGACATTCTAG+TGG - Chr3:68150766-68150785 None:intergenic 35.0%
CATTCATCATAATCCACCAA+GGG - Chr3:68152874-68152893 None:intergenic 35.0%
CTTGGATTCTGTTCTTTGTT+GGG + Chr3:68150364-68150383 MsG0380015302.01.T01:intron 35.0%
GAACAATTAGAACCTTAGGA+AGG - Chr3:68151005-68151024 None:intergenic 35.0%
GACTTGAGGAAACTAAGTAT+TGG - Chr3:68152556-68152575 None:intergenic 35.0%
GCATAACAAAAATGTAGGGT+AGG - Chr3:68151544-68151563 None:intergenic 35.0%
GCTTGGCATAACAAAAATGT+AGG - Chr3:68151549-68151568 None:intergenic 35.0%
GGAAAATCACTTTCATGCTA+TGG + Chr3:68151466-68151485 MsG0380015302.01.T01:intron 35.0%
GGAGAACCAGATTTCAAATA+TGG + Chr3:68152080-68152099 MsG0380015302.01.T01:intron 35.0%
GTCAGATAATCTAAATCTGC+AGG + Chr3:68152573-68152592 MsG0380015302.01.T01:CDS 35.0%
GTTCCTTGGAAAAAGAAAAG+AGG + Chr3:68151351-68151370 MsG0380015302.01.T01:intron 35.0%
TAAAATCGGAGTTCATTCTC+TGG - Chr3:68152294-68152313 None:intergenic 35.0%
TATCATCTGAGTTGTAGAGT+AGG - Chr3:68151245-68151264 None:intergenic 35.0%
TATCTTTGCATCTCATTGGT+TGG + Chr3:68150412-68150431 MsG0380015302.01.T01:intron 35.0%
TATTATGTGGCTAAGTTCCT+TGG + Chr3:68151337-68151356 MsG0380015302.01.T01:intron 35.0%
TCCATATCTTTGCATCTCAT+TGG + Chr3:68150408-68150427 MsG0380015302.01.T01:intron 35.0%
TCTAAGAATCTCGACAAGAA+GGG - Chr3:68152677-68152696 None:intergenic 35.0%
TCTTGGATTCTGTTCTTTGT+TGG + Chr3:68150363-68150382 MsG0380015302.01.T01:intron 35.0%
TGAGGATATCAACTATGTGA+GGG - Chr3:68152798-68152817 None:intergenic 35.0%
TGGATTTCAGATCTTGGATA+AGG - Chr3:68153144-68153163 None:intergenic 35.0%
TTGAGGATATCAACTATGTG+AGG - Chr3:68152799-68152818 None:intergenic 35.0%
TTGTATGCAAAGATCCAGAA+AGG - Chr3:68150288-68150307 None:intergenic 35.0%
TTTATCTCACAAACCCCAAA+TGG - Chr3:68153420-68153439 None:intergenic 35.0%
! ACCCTTTTATTAGAGGCAAA+AGG + Chr3:68151892-68151911 MsG0380015302.01.T01:intron 35.0%
! AGGACTTTTTGCATGTTTTG+AGG - Chr3:68152816-68152835 None:intergenic 35.0%
! ATGACACCTTCTCTAAGAAT+TGG - Chr3:68153036-68153055 None:intergenic 35.0%
! ATTTTCCATTTCTCAGCACT+TGG + Chr3:68151314-68151333 MsG0380015302.01.T01:intron 35.0%
! CACCTTTTGCCTCTAATAAA+AGG - Chr3:68151897-68151916 None:intergenic 35.0%
! GTCTAGGTTGAAAGAAAGAA+TGG - Chr3:68150504-68150523 None:intergenic 35.0%
! TGTAAGCACCCTTTTATTAG+AGG + Chr3:68151885-68151904 MsG0380015302.01.T01:intron 35.0%
!! ACATTTTTCAGCTGTTTTCG+AGG - Chr3:68152836-68152855 None:intergenic 35.0%
!! ACTATATTCTCAAGAGTGTC+GGG - Chr3:68153168-68153187 None:intergenic 35.0%
!! ATAAAAGGGTGCTTACATGT+AGG - Chr3:68151882-68151901 None:intergenic 35.0%
!! ATTTTCTTTGGTTCACTTGG+TGG + Chr3:68150918-68150937 MsG0380015302.01.T01:intron 35.0%
!! CATAATTGGTCTTATCTTGC+AGG + Chr3:68152494-68152513 MsG0380015302.01.T01:intron 35.0%
!! GCAAAAGGTGCTTACATATA+GGG + Chr3:68151907-68151926 MsG0380015302.01.T01:intron 35.0%
!! TAAAAGGGTGCTTACATGTA+GGG - Chr3:68151881-68151900 None:intergenic 35.0%
!! TAATACCAAGTGCTGAGAAA+TGG - Chr3:68151322-68151341 None:intergenic 35.0%
!! TGGATTTTCTTTGGTTCACT+TGG + Chr3:68150915-68150934 MsG0380015302.01.T01:intron 35.0%
!!! AAGGTATTGATTTTCACCCA+TGG + Chr3:68151427-68151446 MsG0380015302.01.T01:intron 35.0%
!!! AATTTTTTGTCTCCACCCTT+CGG - Chr3:68152175-68152194 None:intergenic 35.0%
AAAATCCCTTCGCAATTGCT+TGG - Chr3:68151566-68151585 None:intergenic 40.0%
AAAGGTGGAAATGAGAGAGA+TGG - Chr3:68151733-68151752 None:intergenic 40.0%
AACAAAAATGTAGGGTAGGG+AGG - Chr3:68151540-68151559 None:intergenic 40.0%
AAGTTTCCTGATATCACGTG+CGG - Chr3:68149661-68149680 None:intergenic 40.0%
AGATGAGAGGGTAGGTAATT+TGG - Chr3:68151593-68151612 None:intergenic 40.0%
AGGGAACCAATTCTTAGAGA+AGG + Chr3:68153027-68153046 MsG0380015302.01.T01:CDS 40.0%
AGGGTAGAGGTTATTTAGAG+AGG - Chr3:68149426-68149445 None:intergenic 40.0%
ATATTTGTCCAACCGCAAAG+TGG + Chr3:68151785-68151804 MsG0380015302.01.T01:intron 40.0%
CAATTAGAACCTTAGGAAGG+AGG - Chr3:68151002-68151021 None:intergenic 40.0%
CACTTTCAAAATACACCCTC+CGG + Chr3:68151047-68151066 MsG0380015302.01.T01:intron 40.0%
CATCACAAGATTGTTAAGCC+AGG + Chr3:68151961-68151980 MsG0380015302.01.T01:intron 40.0%
CCAATTATTCATGGGAAGGA+GGG + Chr3:68149526-68149545 MsG0380015302.01.T01:CDS 40.0%
CTAAGAATCTCGACAAGAAG+GGG - Chr3:68152676-68152695 None:intergenic 40.0%
CTAGTGGTCATAAGATGACA+TGG - Chr3:68150750-68150769 None:intergenic 40.0%
CTCCTCCTCCAATTATTCAT+GGG + Chr3:68149518-68149537 MsG0380015302.01.T01:CDS 40.0%
CTCTCATTTCCACCTTTCTT+CGG + Chr3:68151736-68151755 MsG0380015302.01.T01:intron 40.0%
CTGGCTTAACAATCTTGTGA+TGG - Chr3:68151963-68151982 None:intergenic 40.0%
CTTGTCGAGATTCTTAGAGA+CGG + Chr3:68152679-68152698 MsG0380015302.01.T01:CDS 40.0%
GCACCACAACCACTAATAAT+TGG - Chr3:68152649-68152668 None:intergenic 40.0%
GCATATAGGTAGTAGATGAG+AGG - Chr3:68151606-68151625 None:intergenic 40.0%
GCATTCATCATAATCCACCA+AGG - Chr3:68152875-68152894 None:intergenic 40.0%
GCTCTTCAGCTTCTTAAATC+CGG + Chr3:68149612-68149631 MsG0380015302.01.T01:CDS 40.0%
TCACAAGATTGTTAAGCCAG+GGG + Chr3:68151963-68151982 MsG0380015302.01.T01:intron 40.0%
TCCAATTATTCATGGGAAGG+AGG + Chr3:68149525-68149544 MsG0380015302.01.T01:CDS 40.0%
TCCTCCAATTATTCATGGGA+AGG + Chr3:68149522-68149541 MsG0380015302.01.T01:CDS 40.0%
TCCTTCCCATGAATAATTGG+AGG - Chr3:68149526-68149545 None:intergenic 40.0%
TCTCAGCACTTGGTATTATG+TGG + Chr3:68151324-68151343 MsG0380015302.01.T01:intron 40.0%
TGCTTATATTAGTGACCGGA+CGG + Chr3:68151182-68151201 MsG0380015302.01.T01:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG - Chr3:68151201-68151182 None:intergenic 40.0%
TTAAGCAAAGCAAGAAGAGC+CGG - Chr3:68149777-68149796 None:intergenic 40.0%
TTATGCCAAGCAATTGCGAA+GGG + Chr3:68151558-68151577 MsG0380015302.01.T01:intron 40.0%
TTCAATAACCACTTTGCGGT+TGG - Chr3:68151796-68151815 None:intergenic 40.0%
TTCCCATGAATAATTGGAGG+AGG - Chr3:68149523-68149542 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG - Chr3:68151200-68151181 None:intergenic 40.0%
TTGTGCTTTGATAGAACCCT+TGG + Chr3:68152855-68152874 MsG0380015302.01.T01:CDS 40.0%
TTTCTCTCACCTCTTCACAA+TGG + Chr3:68149464-68149483 MsG0380015302.01.T01:exon 40.0%
! AAGGTGCTTACATATAGGGA+CGG + Chr3:68151911-68151930 MsG0380015302.01.T01:intron 40.0%
! CTCTAAGAATCTCGACAAGA+AGG - Chr3:68152678-68152697 None:intergenic 40.0%
! GGTATGTAAAGTCTGGTTTC+CGG - Chr3:68152107-68152126 None:intergenic 40.0%
! TCCGGTCCATATTTGAAATC+TGG - Chr3:68152089-68152108 None:intergenic 40.0%
! TCTGAGGCATTTACAGCAAA+GGG + Chr3:68153281-68153300 MsG0380015302.01.T01:CDS 40.0%
! TCTTGCATCTTAGGCCTTAT+TGG + Chr3:68152230-68152249 MsG0380015302.01.T01:intron 40.0%
! TTGCTAGGCACAAGTTTTCA+TGG - Chr3:68151837-68151856 None:intergenic 40.0%
! TTTGCATCTCATTGGTTGGT+GGG + Chr3:68150416-68150435 MsG0380015302.01.T01:intron 40.0%
!! CTTGCATCTTAGGCCTTATT+GGG + Chr3:68152231-68152250 MsG0380015302.01.T01:intron 40.0%
!! GGCAAAAGGTGCTTACATAT+AGG + Chr3:68151906-68151925 MsG0380015302.01.T01:intron 40.0%
!!! GCCATGCTTGTTTTGCATAT+AGG - Chr3:68151620-68151639 None:intergenic 40.0%
AAAACGGCACTCTCCAAAGT+AGG + Chr3:68152950-68152969 MsG0380015302.01.T01:CDS 45.0%
AAACGGCACTCTCCAAAGTA+GGG + Chr3:68152951-68152970 MsG0380015302.01.T01:CDS 45.0%
AATCTCGACAAGAAGGGGAA+TGG - Chr3:68152671-68152690 None:intergenic 45.0%
ACCCTCTAGCTAGAAACCAT+GGG - Chr3:68151446-68151465 None:intergenic 45.0%
ACGATTTGAAGGTAGGGTAG+AGG - Chr3:68149439-68149458 None:intergenic 45.0%
AGATCGAATCTCCAACACCA+TGG - Chr3:68150030-68150049 None:intergenic 45.0%
AGCTATAGGGAGATCACTTG+GGG - Chr3:68153319-68153338 None:intergenic 45.0%
ATACCCTCCTGTTCAAACTC+TGG + Chr3:68152122-68152141 MsG0380015302.01.T01:intron 45.0%
ATTGACGGGGATGATCAATC+TGG + Chr3:68153207-68153226 MsG0380015302.01.T01:CDS 45.0%
CAAAGTAGGGAACATGCTGT+TGG + Chr3:68152964-68152983 MsG0380015302.01.T01:CDS 45.0%
CAACAGCATGTTCCCTACTT+TGG - Chr3:68152966-68152985 None:intergenic 45.0%
CAGCTATAGGGAGATCACTT+GGG - Chr3:68153320-68153339 None:intergenic 45.0%
CCATGAATAATTGGAGGAGG+AGG - Chr3:68149520-68149539 None:intergenic 45.0%
CCCTCCTTCCCATGAATAAT+TGG - Chr3:68149529-68149548 None:intergenic 45.0%
CCTCCTCCTCCAATTATTCA+TGG + Chr3:68149517-68149536 MsG0380015302.01.T01:CDS 45.0%
CTACTTGAGCTCACTGTACA+AGG + Chr3:68153063-68153082 MsG0380015302.01.T01:CDS 45.0%
CTGAAGTAACCTCCTTCCTA+AGG + Chr3:68150990-68151009 MsG0380015302.01.T01:intron 45.0%
GATCCAGAGTTTGAACAGGA+GGG - Chr3:68152128-68152147 None:intergenic 45.0%
GGGAGTGACCAAAATTTGTG+AGG + Chr3:68151487-68151506 MsG0380015302.01.T01:intron 45.0%
GGTTAAATCACTACACCGTC+CGG - Chr3:68151200-68151219 None:intergenic 45.0%
GTCACTAGATACCTCCACAA+TGG - Chr3:68153504-68153523 None:intergenic 45.0%
GTCGTGGAGGTTCTTGAAAA+CGG + Chr3:68152934-68152953 MsG0380015302.01.T01:CDS 45.0%
GTGAGGTGTAAATGAGTTGC+AGG + Chr3:68151504-68151523 MsG0380015302.01.T01:intron 45.0%
GTTATGCCAAGCAATTGCGA+AGG + Chr3:68151557-68151576 MsG0380015302.01.T01:intron 45.0%
GTTCAAACTCTGGATCACCA+AGG + Chr3:68152132-68152151 MsG0380015302.01.T01:intron 45.0%
GTTCTTTCAACAACTCCCCT+AGG - Chr3:68151763-68151782 None:intergenic 45.0%
TACGGAGTGTGGTAGATGTA+AGG + Chr3:68151408-68151427 MsG0380015302.01.T01:intron 45.0%
TAGGTAGTAGATGAGAGGGT+AGG - Chr3:68151601-68151620 None:intergenic 45.0%
TCAGCATGGAACAAAGTCTG+AGG + Chr3:68153265-68153284 MsG0380015302.01.T01:CDS 45.0%
TGAATAATTGGAGGAGGAGG+AGG - Chr3:68149517-68149536 None:intergenic 45.0%
TGAGATGGTTCAAGTCAGCA+TGG + Chr3:68153251-68153270 MsG0380015302.01.T01:CDS 45.0%
TGATCCAGAGTTTGAACAGG+AGG - Chr3:68152129-68152148 None:intergenic 45.0%
TGCAAGAATACCACCTTCCT+CGG - Chr3:68152914-68152933 None:intergenic 45.0%
TGCTTACATATAGGGACGGA+GGG + Chr3:68151915-68151934 MsG0380015302.01.T01:intron 45.0%
TGCTTTGATAGAACCCTTGG+TGG + Chr3:68152858-68152877 MsG0380015302.01.T01:CDS 45.0%
TGGTGATCCAGAGTTTGAAC+AGG - Chr3:68152132-68152151 None:intergenic 45.0%
! ACAGGAGGGTATGTAAAGTC+TGG - Chr3:68152114-68152133 None:intergenic 45.0%
! CGAAAACATCACAGAGGTGT+CGG + Chr3:68149682-68149701 MsG0380015302.01.T01:CDS 45.0%
! CTTTGCATCTCATTGGTTGG+TGG + Chr3:68150415-68150434 MsG0380015302.01.T01:intron 45.0%
! GCCTTATTGGGTACCTTCTA+GGG + Chr3:68152243-68152262 MsG0380015302.01.T01:intron 45.0%
! GGCACAAGTTTTCATGGTAC+TGG - Chr3:68151831-68151850 None:intergenic 45.0%
! GTCTGAGGCATTTACAGCAA+AGG + Chr3:68153280-68153299 MsG0380015302.01.T01:CDS 45.0%
! TAAGAAGCTGAAGAGCACGA+CGG - Chr3:68149608-68149627 None:intergenic 45.0%
!! ACCCATGGTTTCTAGCTAGA+GGG + Chr3:68151442-68151461 MsG0380015302.01.T01:intron 45.0%
!! ACCCTAGAAGGTACCCAATA+AGG - Chr3:68152247-68152266 None:intergenic 45.0%
!! CTTAGAGAAGGTGTCATTCC+AGG + Chr3:68153039-68153058 MsG0380015302.01.T01:CDS 45.0%
!! TATTCTCAAGAGTGTCGGGT+TGG - Chr3:68153164-68153183 None:intergenic 45.0%
!! TCGGGTTGGATTTCAGATCT+TGG - Chr3:68153150-68153169 None:intergenic 45.0%
!! TTGTGGAGGTATCTAGTGAC+TGG + Chr3:68153504-68153523 MsG0380015302.01.T01:three_prime_UTR 45.0%
!!! CTTTATTTTTTATTTAAAAT+CGG - Chr3:68152308-68152327 None:intergenic 5.0%
!!! TTTATTTTGTTTTTTATTAT+TGG + Chr3:68150464-68150483 MsG0380015302.01.T01:intron 5.0%
ACAGTGAGCTCAAGTAGTCC+TGG - Chr3:68153060-68153079 None:intergenic 50.0%
AGGTGGTATTCTTGCAGTCG+TGG + Chr3:68152918-68152937 MsG0380015302.01.T01:CDS 50.0%
ATGCCTTGAAGCCATGGTGT+TGG + Chr3:68150016-68150035 MsG0380015302.01.T01:intron 50.0%
CACCCTCTAGCTAGAAACCA+TGG - Chr3:68151447-68151466 None:intergenic 50.0%
CATGTGATGCCTTGAAGCCA+TGG + Chr3:68150010-68150029 MsG0380015302.01.T01:intron 50.0%
CCAAGTGATCTCCCTATAGC+TGG + Chr3:68153318-68153337 MsG0380015302.01.T01:CDS 50.0%
CCAGCTATAGGGAGATCACT+TGG - Chr3:68153321-68153340 None:intergenic 50.0%
CTCGGTTGAGTCTCATGAAC+CGG + Chr3:68149755-68149774 MsG0380015302.01.T01:CDS 50.0%
GAACAGGAGGAAGGTGAATG+AGG - Chr3:68149495-68149514 None:intergenic 50.0%
GTGCTTACATATAGGGACGG+AGG + Chr3:68151914-68151933 MsG0380015302.01.T01:intron 50.0%
TAGATACCTCCACAATGGCC+TGG - Chr3:68153499-68153518 None:intergenic 50.0%
TCCACCTTTCTTCGGTCCTA+GGG + Chr3:68151744-68151763 MsG0380015302.01.T01:intron 50.0%
TCCTTCCCCTGATAACCGAA+GGG + Chr3:68152157-68152176 MsG0380015302.01.T01:intron 50.0%
TCTCCAACACCATGGCTTCA+AGG - Chr3:68150022-68150041 None:intergenic 50.0%
TCTCCACCCTTCGGTTATCA+GGG - Chr3:68152166-68152185 None:intergenic 50.0%
TGCTTACATGTAGGGACGGA+GGG - Chr3:68151873-68151892 None:intergenic 50.0%
TGGTATTCTTGCAGTCGTGG+AGG + Chr3:68152921-68152940 MsG0380015302.01.T01:CDS 50.0%
TTATCAGGGGAAGGAAGCCT+TGG - Chr3:68152152-68152171 None:intergenic 50.0%
TTCAAGCCGCACGTGATATC+AGG + Chr3:68149652-68149671 MsG0380015302.01.T01:CDS 50.0%
TTCCACCTTTCTTCGGTCCT+AGG + Chr3:68151743-68151762 MsG0380015302.01.T01:intron 50.0%
TTCCTTCCCCTGATAACCGA+AGG + Chr3:68152156-68152175 MsG0380015302.01.T01:intron 50.0%
TTCTATGCTCCGAGTCGACT+CGG + Chr3:68149737-68149756 MsG0380015302.01.T01:CDS 50.0%
! AGGGTGCTTACATGTAGGGA+CGG - Chr3:68151877-68151896 None:intergenic 50.0%
! ATAGGGACGGAGGGAGTATA+TGG + Chr3:68151924-68151943 MsG0380015302.01.T01:intron 50.0%
! CAGAAGCACAGCCAGCTATA+GGG - Chr3:68153332-68153351 None:intergenic 50.0%
! CGTCAGTTGTCTGAAGCTGT+CGG + Chr3:68149705-68149724 MsG0380015302.01.T01:CDS 50.0%
! GAAAGTGAGAGTACGGAGTG+TGG + Chr3:68151397-68151416 MsG0380015302.01.T01:intron 50.0%
! TCAGAAGCACAGCCAGCTAT+AGG - Chr3:68153333-68153352 None:intergenic 50.0%
!! CACCCATGGTTTCTAGCTAG+AGG + Chr3:68151441-68151460 MsG0380015302.01.T01:intron 50.0%
!! CATGGTTTCTAGCTAGAGGG+TGG + Chr3:68151445-68151464 MsG0380015302.01.T01:intron 50.0%
!! CGCGCTTTTGTCTGAGACTT+CGG - Chr3:68153093-68153112 None:intergenic 50.0%
!! GAGGAGTGTCCATTGTGAAG+AGG - Chr3:68149476-68149495 None:intergenic 50.0%
!! GGCCTTATTGGGTACCTTCT+AGG + Chr3:68152242-68152261 MsG0380015302.01.T01:intron 50.0%
ACCACCTTCCTCGGATGTCA+AGG - Chr3:68152905-68152924 None:intergenic 55.0%
ACCCTTCGGTTATCAGGGGA+AGG - Chr3:68152161-68152180 None:intergenic 55.0%
ACCTTCCTCGGATGTCAAGG+CGG - Chr3:68152902-68152921 None:intergenic 55.0%
ACTCCCCTAGGACCGAAGAA+AGG - Chr3:68151751-68151770 None:intergenic 55.0%
ACTGCATCAGCTTTCGCCTG+TGG - Chr3:68152709-68152728 None:intergenic 55.0%
ATTGGAGGAGGAGGAGGAAC+AGG - Chr3:68149511-68149530 None:intergenic 55.0%
CCACCTTTCTTCGGTCCTAG+GGG + Chr3:68151745-68151764 MsG0380015302.01.T01:intron 55.0%
CTCCACCCTTCGGTTATCAG+GGG - Chr3:68152165-68152184 None:intergenic 55.0%
CTGCATCAGCTTTCGCCTGT+GGG - Chr3:68152708-68152727 None:intergenic 55.0%
GAGACTCAACCGAGTCGACT+CGG - Chr3:68149749-68149768 None:intergenic 55.0%
GCTTCTTAAATCCGGCGTGC+CGG + Chr3:68149620-68149639 MsG0380015302.01.T01:CDS 55.0%
GGCGAAAGCTGATGCAGTGA+TGG + Chr3:68152711-68152730 MsG0380015302.01.T01:CDS 55.0%
GTCTCCACCCTTCGGTTATC+AGG - Chr3:68152167-68152186 None:intergenic 55.0%
GTGCTTACATGTAGGGACGG+AGG - Chr3:68151874-68151893 None:intergenic 55.0%
TATGCCAGTCCAGGCCATTG+TGG + Chr3:68153487-68153506 MsG0380015302.01.T01:three_prime_UTR 55.0%
TCTTAGAGACGGAAGCCCAC+AGG + Chr3:68152690-68152709 MsG0380015302.01.T01:CDS 55.0%
TTCCCCTGATAACCGAAGGG+TGG + Chr3:68152160-68152179 MsG0380015302.01.T01:intron 55.0%
! AAGCTGAAGAGCACGACGGA+CGG - Chr3:68149604-68149623 None:intergenic 55.0%
! TGGGTTGGGGTGTAGAGAGT+TGG + Chr3:68150545-68150564 MsG0380015302.01.T01:intron 55.0%
ACCGCCTTGACATCCGAGGA+AGG + Chr3:68152898-68152917 MsG0380015302.01.T01:CDS 60.0%
ACCTCCACAATGGCCTGGAC+TGG - Chr3:68153494-68153513 None:intergenic 60.0%
AGAGCACGACGGACGGCTAA+CGG - Chr3:68149597-68149616 None:intergenic 60.0%
CAGAACCGCCTTGACATCCG+AGG + Chr3:68152894-68152913 MsG0380015302.01.T01:CDS 60.0%
CCCCTAGGACCGAAGAAAGG+TGG - Chr3:68151748-68151767 None:intergenic 60.0%
GAGGAGGAGGAACAGGAGGA+AGG - Chr3:68149504-68149523 None:intergenic 60.0%
GCCTTGACATCCGAGGAAGG+TGG + Chr3:68152901-68152920 MsG0380015302.01.T01:CDS 60.0%
AATCCGGCGTGCCGGAGTTG+CGG + Chr3:68149628-68149647 MsG0380015302.01.T01:CDS 65.0%
AGCACGACGGACGGCTAACG+GGG - Chr3:68149595-68149614 None:intergenic 65.0%
GAGCACGACGGACGGCTAAC+GGG - Chr3:68149596-68149615 None:intergenic 65.0%
GCCAGTCCAGGCCATTGTGG+AGG + Chr3:68153490-68153509 MsG0380015302.01.T01:three_prime_UTR 65.0%
GCGGCTTGAAGCCGCAACTC+CGG - Chr3:68149642-68149661 None:intergenic 65.0%
GGAGGAGGAGGAGGAACAGG+AGG - Chr3:68149508-68149527 None:intergenic 65.0%
AAGCCGCAACTCCGGCACGC+CGG - Chr3:68149634-68149653 None:intergenic 70.0%
CGGACGGCTAACGGGGTCTG+CGG - Chr3:68149588-68149607 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 68149412 68153635 68149412 ID=MsG0380015302.01;Name=MsG0380015302.01
Chr3 mRNA 68149412 68153635 68149412 ID=MsG0380015302.01.T01;Parent=MsG0380015302.01;Name=MsG0380015302.01.T01;_AED=0.48;_eAED=0.48;_QI=71|1|1|1|1|1|2|267|395
Chr3 exon 68149412 68149817 68149412 ID=MsG0380015302.01.T01:exon:23274;Parent=MsG0380015302.01.T01
Chr3 exon 68152516 68153635 68152516 ID=MsG0380015302.01.T01:exon:23275;Parent=MsG0380015302.01.T01
Chr3 five_prime_UTR 68149412 68149482 68149412 ID=MsG0380015302.01.T01:five_prime_utr;Parent=MsG0380015302.01.T01
Chr3 CDS 68149483 68149817 68149483 ID=MsG0380015302.01.T01:cds;Parent=MsG0380015302.01.T01
Chr3 CDS 68152516 68153368 68152516 ID=MsG0380015302.01.T01:cds;Parent=MsG0380015302.01.T01
Chr3 three_prime_UTR 68153369 68153635 68153369 ID=MsG0380015302.01.T01:three_prime_utr;Parent=MsG0380015302.01.T01
Gene Sequence

>MsG0380015302.01.T01

ATGGACACTCCTCATTCACCTTCCTCCTGTTCCTCCTCCTCCTCCAATTATTCATGGGAAGGAGGGCATCCTACCGACACAATTATTATAGAAGCTGAAGAGCCGCAGACCCCGTTAGCCGTCCGTCGTGCTCTTCAGCTTCTTAAATCCGGCGTGCCGGAGTTGCGGCTTCAAGCCGCACGTGATATCAGGAAACTTACGAAAACATCACAGAGGTGTCGGCGTCAGTTGTCTGAAGCTGTCGGTACGCTTGTTTCTATGCTCCGAGTCGACTCGGTTGAGTCTCATGAACCGGCTCTTCTTGCTTTGCTTAATCTCGCCGTCAAAGATGAAAAGAATAAAATCAATATTGTGGAGGCTGGAGCATTAGAACCAATACTTAGTTTCCTCAAGTCAGATAATCTAAATCTGCAGGCATCTGCAGCTGCAGCTTTGCTCACACTATCTGCCTCTTCAATCAACAAACCAATTATTAGTGGTTGTGGTGCCATTCCCCTTCTTGTCGAGATTCTTAGAGACGGAAGCCCACAGGCGAAAGCTGATGCAGTGATGGCTCTCTCTAATTTATCAACATACCCTAATAATCTTAGCATTATTCTCGAAACAAATCCAATCCCTCACATAGTTGATATCCTCAAAACATGCAAAAAGTCCTCGAAAACAGCTGAAAAATGTTGTGCTTTGATAGAACCCTTGGTGGATTATGATGAATGCAGAACCGCCTTGACATCCGAGGAAGGTGGTATTCTTGCAGTCGTGGAGGTTCTTGAAAACGGCACTCTCCAAAGTAGGGAACATGCTGTTGGAACACTATTGACAATGTGCCAAAGTGATCGATGTAAATACAGGGAACCAATTCTTAGAGAAGGTGTCATTCCAGGACTACTTGAGCTCACTGTACAAGGAACACCGAAGTCTCAGACAAAAGCGCGCACCCTTTTGCAACTACTAAGAGAATCTCCTTATCCAAGATCTGAAATCCAACCCGACACTCTTGAGAATATAGTATGCAACATCATATCTCAAATTGACGGGGATGATCAATCTGGTAAAGCAAAGAAAATGCTAGCTGAGATGGTTCAAGTCAGCATGGAACAAAGTCTGAGGCATTTACAGCAAAGGGCACTTGTATGCACCCCAAGTGATCTCCCTATAGCTGGCTGTGCTTCTGAAGTTTCTTTTAAGTAA
Protein sequence

>MsG0380015302.01.T01

MDTPHSPSSCSSSSSNYSWEGGHPTDTIIIEAEEPQTPLAVRRALQLLKSGVPELRLQAARDIRKLTKTSQRCRRQLSEAVGTLVSMLRVDSVESHEPALLALLNLAVKDEKNKINIVEAGALEPILSFLKSDNLNLQASAAAALLTLSASSINKPIISGCGAIPLLVEILRDGSPQAKADAVMALSNLSTYPNNLSIILETNPIPHIVDILKTCKKSSKTAEKCCALIEPLVDYDECRTALTSEEGGILAVVEVLENGTLQSREHAVGTLLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQTKARTLLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDLPIAGCASEVSFK*