AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015461.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015461.01.T01 MTR_3g070410 98.158 543 10 0 1 543 1 543 0.0 1120
MsG0380015461.01.T01 MTR_5g077080 29.310 464 297 9 53 512 50 486 3.40e-65 221
MsG0380015461.01.T01 MTR_3g094740 32.281 285 171 6 87 366 204 471 5.03e-39 152
MsG0380015461.01.T01 MTR_3g094740 32.509 283 169 6 87 364 204 469 5.27e-39 152
MsG0380015461.01.T01 MTR_8g091710 31.228 285 174 6 87 366 195 462 2.83e-37 147
MsG0380015461.01.T01 MTR_3g082750 27.073 410 261 8 69 471 185 563 3.50e-37 146
MsG0380015461.01.T01 MTR_1g008980 29.022 317 204 7 81 390 45 347 2.03e-35 142
MsG0380015461.01.T01 MTR_4g104070 30.218 321 193 10 83 390 64 366 2.34e-30 124
MsG0380015461.01.T01 MTR_4g026450 28.472 288 185 6 74 358 139 408 1.88e-28 120
MsG0380015461.01.T01 MTR_5g068050 30.255 314 184 11 81 385 119 406 3.72e-28 118
MsG0380015461.01.T01 MTR_3g105760 28.936 235 159 3 102 329 136 369 2.48e-23 104
MsG0380015461.01.T01 MTR_4g091510 27.619 315 201 11 96 394 222 525 7.22e-22 100
MsG0380015461.01.T01 MTR_4g091510 27.619 315 201 11 96 394 227 530 7.70e-22 99.8
MsG0380015461.01.T01 MTR_1g046620 25.616 406 243 12 76 466 174 535 2.68e-21 98.6
MsG0380015461.01.T01 MTR_0053s0030 27.273 275 179 6 87 358 140 396 3.37e-21 98.2
MsG0380015461.01.T01 MTR_6g038750 28.516 256 166 8 76 329 119 359 3.73e-21 97.8
MsG0380015461.01.T01 MTR_1g009860 31.801 261 154 9 80 329 124 371 1.72e-20 95.9
MsG0380015461.01.T01 MTR_1g009860 31.801 261 154 9 80 329 124 371 2.35e-20 95.1
MsG0380015461.01.T01 MTR_1g085610 27.523 327 215 9 66 390 206 512 4.82e-18 88.2
MsG0380015461.01.T01 MTR_8g464860 27.187 320 198 11 96 394 216 521 1.12e-17 87.0
MsG0380015461.01.T01 MTR_1g095480 25.984 254 166 6 90 328 203 449 1.71e-17 86.7
MsG0380015461.01.T01 MTR_2g011640 27.812 320 191 12 96 394 275 575 2.13e-17 86.3
MsG0380015461.01.T01 MTR_1g095480 25.984 254 166 6 90 328 203 449 2.16e-17 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015461.01.T01 AT2G40090 72.575 536 143 1 3 538 5 536 0.0 822
MsG0380015461.01.T01 AT1G65950 32.751 458 280 8 14 467 26 459 4.73e-75 248
MsG0380015461.01.T01 AT1G65950 33.111 450 273 8 14 459 26 451 5.14e-74 243
MsG0380015461.01.T01 AT5G64940 31.104 299 182 7 71 364 205 484 2.78e-36 144
MsG0380015461.01.T01 AT5G64940 31.104 299 182 7 71 364 205 484 2.78e-36 144
MsG0380015461.01.T01 AT5G24810 28.440 327 212 5 73 390 81 394 3.78e-35 141
MsG0380015461.01.T01 AT4G24810 31.629 313 179 11 83 381 18 309 3.92e-34 132
MsG0380015461.01.T01 AT3G07700 29.936 314 199 5 71 382 175 469 4.20e-34 137
MsG0380015461.01.T01 AT3G07700 29.936 314 199 5 71 382 175 469 4.20e-34 137
MsG0380015461.01.T01 AT3G07700 29.936 314 199 5 71 382 175 469 4.20e-34 137
MsG0380015461.01.T01 AT3G07700 29.936 314 199 5 71 382 175 469 5.33e-34 137
MsG0380015461.01.T01 AT4G24810 31.629 313 179 11 83 381 18 309 2.55e-33 132
MsG0380015461.01.T01 AT4G24810 31.629 313 179 11 83 381 18 309 2.55e-33 132
MsG0380015461.01.T01 AT4G24810 31.126 302 175 10 83 370 18 300 3.85e-33 129
MsG0380015461.01.T01 AT4G24810 31.629 313 179 11 83 381 61 352 4.57e-33 132
MsG0380015461.01.T01 AT5G24810 25.978 358 212 6 73 390 81 425 3.13e-31 129
MsG0380015461.01.T01 AT4G24810 30.938 320 179 12 83 381 18 316 8.53e-31 125
MsG0380015461.01.T01 AT5G50330 28.814 354 213 14 45 381 21 352 1.79e-29 122
MsG0380015461.01.T01 AT1G79600 29.699 266 172 6 70 332 136 389 7.33e-28 118
MsG0380015461.01.T01 AT5G05200 29.618 314 186 10 81 385 120 407 2.09e-26 113
MsG0380015461.01.T01 AT5G24970 29.771 262 166 5 85 329 135 395 2.91e-26 114
MsG0380015461.01.T01 AT5G24970 29.771 262 166 5 85 329 174 434 3.74e-26 113
MsG0380015461.01.T01 AT5G50330 27.195 353 204 14 45 381 21 336 1.06e-24 107
MsG0380015461.01.T01 AT1G71810 32.117 274 164 10 59 329 96 350 1.29e-24 108
MsG0380015461.01.T01 AT3G24190 27.988 343 180 11 71 390 177 475 1.25e-22 102
MsG0380015461.01.T01 AT5G24970 28.626 262 166 6 85 329 135 392 1.73e-22 102
MsG0380015461.01.T01 AT1G11390 27.987 318 195 11 96 394 222 524 3.80e-22 100
MsG0380015461.01.T01 AT4G31390 29.762 252 157 7 87 329 167 407 8.42e-22 100
MsG0380015461.01.T01 AT1G61640 26.525 377 235 14 35 394 170 521 7.64e-21 96.7
MsG0380015461.01.T01 AT1G61640 26.525 377 235 14 35 394 170 521 1.13e-20 96.3
MsG0380015461.01.T01 AT2G39190 27.626 257 161 6 90 328 202 451 8.46e-19 90.9
MsG0380015461.01.T01 AT4G31390 30.476 210 127 6 129 329 9 208 3.89e-18 87.8
MsG0380015461.01.T01 AT4G01660 27.564 312 194 9 86 390 224 510 1.54e-16 83.2
MsG0380015461.01.T01 AT2G39190 29.221 154 107 2 90 242 202 354 3.54e-11 65.5

Find 141 sgRNAs with CRISPR-Local

Find 487 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACTTGGTTTAGCATTAAA+TGG 0.176917 3:+70538427 MsG0380015461.01.T01:CDS
GCTGTAAATCCCAATTAAAA+TGG 0.248108 3:+70538830 MsG0380015461.01.T01:three_prime_UTR
TCCACATGAACTTTCAATAT+TGG 0.250032 3:+70535310 MsG0380015461.01.T01:CDS
GCTCACACAAAGCCACAAAT+TGG 0.250364 3:-70538647 None:intergenic
AGATGAAACATGCACTTTAT+AGG 0.258649 3:+70538769 MsG0380015461.01.T01:three_prime_UTR
TTAGAAGCTCAGAGATTTCA+TGG 0.293893 3:-70538033 None:intergenic
GCAATACCTATAATCGAAAC+TGG 0.297867 3:-70533516 None:intergenic
CAGATATTAAATACTTTATC+TGG 0.301182 3:-70533056 None:intergenic
ACCCAGAATGCTAGCTTTGC+TGG 0.306023 3:-70535876 None:intergenic
TATATGCACCAAAAGTATAC+TGG 0.307178 3:+70535198 MsG0380015461.01.T01:CDS
CATGGATCATTTAGTTATAC+AGG 0.319569 3:+70537607 MsG0380015461.01.T01:CDS
CGCTGCACTGCCGCCGCCGA+TGG 0.330068 3:-70532060 None:intergenic
CTCAGACCCCAGTATACTTT+TGG 0.336579 3:-70535206 None:intergenic
GTTAATTGTTAATTGAAAAT+CGG 0.343357 3:-70531980 None:intergenic
TGGACAGAAGATCCAAGATT+TGG 0.347952 3:+70538731 MsG0380015461.01.T01:three_prime_UTR
TTCCAGCAAAGCTAGCATTC+TGG 0.354732 3:+70535874 MsG0380015461.01.T01:CDS
CTGAAAACATCTTGTATCAT+TGG 0.354892 3:+70538348 MsG0380015461.01.T01:CDS
TTTGGATAGCCTCCAAATCT+TGG 0.360896 3:-70538743 None:intergenic
TGGAGCCTCAAAATTATGTT+TGG 0.373343 3:+70538711 MsG0380015461.01.T01:three_prime_UTR
ACGGATCCCTAGTTTCTTAA+TGG 0.374778 3:-70535288 None:intergenic
ATGAAATCTCTGAGCTTCTA+AGG 0.379524 3:+70538035 MsG0380015461.01.T01:CDS
TGGACAACATCTTGGGCAAT+TGG 0.388804 3:+70532826 MsG0380015461.01.T01:CDS
AGAAATTTCTTCCCAATTTG+TGG 0.389474 3:+70538635 MsG0380015461.01.T01:three_prime_UTR
GATGTATTCATGAAAGAGTT+TGG 0.393922 3:+70533026 MsG0380015461.01.T01:CDS
TCCAGCAAAGCTAGCATTCT+GGG 0.395310 3:+70535875 MsG0380015461.01.T01:CDS
GAAATAATTATGCTGCACTA+TGG 0.395314 3:+70537453 MsG0380015461.01.T01:CDS
ATAAAGCTTGGACAACATCT+TGG 0.413633 3:+70532818 MsG0380015461.01.T01:CDS
AGGCTGTCATTGACGCAAAA+AGG 0.415686 3:+70538385 MsG0380015461.01.T01:CDS
GAGAGCTTGAGTGCGGTTGC+GGG 0.415943 3:-70532107 None:intergenic
TCCCTCTCAATACTCCCTTC+CGG 0.416241 3:-70532719 None:intergenic
AACTTGGTTTAGCATTAAAT+GGG 0.426540 3:+70538428 MsG0380015461.01.T01:CDS
GCAAGGGAAGCACTTGCAAT+TGG 0.429205 3:-70533220 None:intergenic
TTCCATTGTAAGCAACTTTG+AGG 0.431290 3:-70535231 None:intergenic
GAAGCACTTGCAATTGGAAC+TGG 0.431855 3:-70533214 None:intergenic
CAAATAGTTAAACTTGTAAC+CGG 0.433547 3:-70538903 None:intergenic
GTGCATGTTTCATCTCGGTT+TGG 0.433608 3:-70538761 None:intergenic
GAACCTTCACAGCAACTTGT+TGG 0.440252 3:-70533273 None:intergenic
AAAGAACAGTGAGAGGTGTT+TGG 0.446066 3:+70535136 MsG0380015461.01.T01:CDS
CTGTAAATCCCAATTAAAAT+GGG 0.451826 3:+70538831 MsG0380015461.01.T01:three_prime_UTR
CTTGCAACCGCCATCGGCGG+CGG 0.452102 3:+70532050 MsG0380015461.01.T01:CDS
ATTTGTTCATACGATGAAAC+CGG 0.457150 3:-70532999 None:intergenic
GGAGAGCTTGAGTGCGGTTG+CGG 0.457958 3:-70532108 None:intergenic
ATATTCACTACATGGAGTTC+CGG 0.459088 3:+70532700 MsG0380015461.01.T01:CDS
CATCGGCGGCGGCAGTGCAG+CGG 0.464220 3:+70532061 MsG0380015461.01.T01:CDS
GGAGGGATTTATATAAAGCT+TGG 0.464579 3:+70532806 MsG0380015461.01.T01:CDS
AATAGCATATGGCATCGTTA+TGG 0.465312 3:+70532003 MsG0380015461.01.T01:exon
ACTGCCGCCAACATCGTGTT+TGG 0.468636 3:+70532167 MsG0380015461.01.T01:CDS
CACGATGTTGGCGGCAGTGA+CGG 0.472604 3:-70532162 None:intergenic
TGCTGATGCTAATGCAATCA+AGG 0.474775 3:+70537490 MsG0380015461.01.T01:CDS
TGCACTGCCGCCGCCGATGG+CGG 0.477465 3:-70532057 None:intergenic
TAAAGCTTGGACAACATCTT+GGG 0.481035 3:+70532819 MsG0380015461.01.T01:CDS
TAACAATTAACAATAGCATA+TGG 0.481050 3:+70531992 MsG0380015461.01.T01:exon
CTCACACAAAGCCACAAATT+GGG 0.490728 3:-70538646 None:intergenic
AACATCTTGTATCATTGGAA+AGG 0.493183 3:+70538353 MsG0380015461.01.T01:CDS
TCAGACACAGGGATCACTAC+TGG 0.498878 3:+70538317 MsG0380015461.01.T01:intron
CTGAAATGATGTTCAAGCAC+GGG 0.499259 3:+70535801 MsG0380015461.01.T01:CDS
CAAGTTCTTTATAGAGTCCA+TGG 0.502342 3:-70537418 None:intergenic
GTGAAGACCATTAAGAAACT+AGG 0.505903 3:+70535281 MsG0380015461.01.T01:CDS
CTTACAATGGAATACGTAGA+TGG 0.513301 3:+70535242 MsG0380015461.01.T01:CDS
ATGGCATCGTTATGGCGCGC+AGG 0.514942 3:+70532011 MsG0380015461.01.T01:CDS
GTCCATGCTAAATAGATGTC+CGG 0.514943 3:+70532980 MsG0380015461.01.T01:CDS
CTCGAAGTCTTTGCGCGGAA+CGG 0.518471 3:-70532766 None:intergenic
TAGCTTTGCTGGAAGGCAAT+GGG 0.518972 3:-70535865 None:intergenic
AGGTCTCATTGTTAGAGCTC+CGG 0.520308 3:-70537561 None:intergenic
GATTAAAGAGAGTTTGCCCC+AGG 0.520836 3:+70533800 MsG0380015461.01.T01:CDS
CTAGCTTTGCTGGAAGGCAA+TGG 0.521347 3:-70535866 None:intergenic
ACAGAAGATCCAAGATTTGG+AGG 0.521539 3:+70538734 MsG0380015461.01.T01:three_prime_UTR
TTCTCACTTGTAAAAGCCAC+AGG 0.528714 3:-70538494 None:intergenic
GATTATGAATATTCACTACA+TGG 0.535256 3:+70532692 MsG0380015461.01.T01:intron
TAAAGTTGTCGACCCGTCCA+TGG 0.536019 3:+70537589 MsG0380015461.01.T01:CDS
ATATGCACCAAAAGTATACT+GGG 0.539784 3:+70535199 MsG0380015461.01.T01:CDS
CAGTGACGGCGTCGTTGAAG+AGG 0.541599 3:-70532148 None:intergenic
TTCCTCAAAGTTGCTTACAA+TGG 0.542764 3:+70535229 MsG0380015461.01.T01:CDS
CATTGGAAAGGTTTCTTCCG+AGG 0.544918 3:+70538365 MsG0380015461.01.T01:CDS
TCTCTACTTGCAACCGCCAT+CGG 0.547844 3:+70532044 MsG0380015461.01.T01:CDS
TTTCAGTCATGTGAGAATGT+TGG 0.548342 3:-70533433 None:intergenic
CGGCGTCGTTGAAGAGGCGA+CGG 0.548902 3:-70532142 None:intergenic
CTGTATAACTAAATGATCCA+TGG 0.549358 3:-70537606 None:intergenic
GAGTGCGGTTGCGGGATCGT+CGG 0.553080 3:-70532099 None:intergenic
CATGTAGCTCGCACACATGA+TGG 0.555228 3:+70533250 MsG0380015461.01.T01:CDS
GGTTGCGGGATCGTCGGAGG+TGG 0.555252 3:-70532093 None:intergenic
GGCGTCGTTGAAGAGGCGAC+GGG 0.555978 3:-70532141 None:intergenic
TCCACATGCTGCTAATATGT+TGG 0.557533 3:+70535838 MsG0380015461.01.T01:CDS
ATCTTACCTGCATTTCTGAA+CGG 0.557800 3:-70537643 None:intergenic
GAGTGACCGTTCAGAAATGC+AGG 0.561178 3:+70537637 MsG0380015461.01.T01:CDS
TAATTATGCTGCACTATGGA+AGG 0.564903 3:+70537457 MsG0380015461.01.T01:CDS
ATTTAGCATGGACTCCCTCA+TGG 0.565247 3:-70532970 None:intergenic
GGGTCGACAACTTTATTCCA+AGG 0.566256 3:-70537581 None:intergenic
GAGCTCTAACAATGAGACCT+TGG 0.566797 3:+70537564 MsG0380015461.01.T01:CDS
ACCAATATTGAAAGTTCATG+TGG 0.568193 3:-70535311 None:intergenic
TGCGGTTGCGGGATCGTCGG+AGG 0.568474 3:-70532096 None:intergenic
ATAAAGTGCATGTTTCATCT+CGG 0.569720 3:-70538766 None:intergenic
TGAAGACCATTAAGAAACTA+GGG 0.569728 3:+70535282 MsG0380015461.01.T01:CDS
GGTTGCAAGTAGAGATAGCT+TGG 0.572274 3:-70532036 None:intergenic
AATTGGAACTGGATCGAACT+CGG 0.575635 3:-70533203 None:intergenic
TTCTCACATGACTGAAACTG+CGG 0.577566 3:+70533439 MsG0380015461.01.T01:CDS
AGTACCAAACACGATGTTGG+CGG 0.582818 3:-70532171 None:intergenic
TACAGTACCAAACACGATGT+TGG 0.583904 3:-70532174 None:intergenic
CAATACCTATAATCGAAACT+GGG 0.585409 3:-70533515 None:intergenic
TAACTAAATGATCCATGGAC+GGG 0.586515 3:-70537601 None:intergenic
CACTACATGGAGTTCCGGAA+GGG 0.589788 3:+70532705 MsG0380015461.01.T01:CDS
AAGTGAGAAAGGCATTGCCT+TGG 0.593080 3:+70538508 MsG0380015461.01.T01:CDS
TGGCATCGTTATGGCGCGCA+GGG 0.594649 3:+70532012 MsG0380015461.01.T01:CDS
TTCCGGAAGGGAGTATTGAG+AGG 0.596362 3:+70532717 MsG0380015461.01.T01:CDS
GGAAAATGCAGATGTTCCTG+TGG 0.601073 3:+70538478 MsG0380015461.01.T01:CDS
AACCGGACATCTATTTAGCA+TGG 0.601843 3:-70532982 None:intergenic
AGAATGCTAGCTTTGCTGGA+AGG 0.603218 3:-70535872 None:intergenic
TCACTACATGGAGTTCCGGA+AGG 0.604128 3:+70532704 MsG0380015461.01.T01:CDS
TCCCTCCATTCTTAAAACAC+AGG 0.607328 3:-70532790 None:intergenic
CAATATGAGGAGACAAGTTG+CGG 0.607935 3:-70535166 None:intergenic
AGCTACATGAACTTGTGCAA+GGG 0.609979 3:-70533236 None:intergenic
TTTGTGGCTTTGTGTGAGCA+CGG 0.611908 3:+70538651 MsG0380015461.01.T01:three_prime_UTR
TGGCCAACAAGTTGCTGTGA+AGG 0.617597 3:+70533270 MsG0380015461.01.T01:CDS
GAAGTCTTTGCGCGGAACGG+AGG 0.621149 3:-70532763 None:intergenic
ATAACTAAATGATCCATGGA+CGG 0.623080 3:-70537602 None:intergenic
TGGGAAGAAATTTCTGACCA+CGG 0.625225 3:-70538627 None:intergenic
GCTGAAATGATGTTCAAGCA+CGG 0.625325 3:+70535800 MsG0380015461.01.T01:CDS
GAGCTACATGAACTTGTGCA+AGG 0.625610 3:-70533237 None:intergenic
CTACTTGCAACCGCCATCGG+CGG 0.626613 3:+70532047 MsG0380015461.01.T01:CDS
ACCAACATATTAGCAGCATG+TGG 0.630795 3:-70535839 None:intergenic
TCCGGAAGGGAGTATTGAGA+GGG 0.631346 3:+70532718 MsG0380015461.01.T01:CDS
ATATTGAAAGTTCATGTGGA+CGG 0.636737 3:-70535307 None:intergenic
CTAACATAAATATAGTACTC+CGG 0.636838 3:+70538884 MsG0380015461.01.T01:three_prime_UTR
AAGAGTATGTTCAGACCATG+AGG 0.638756 3:+70532955 MsG0380015461.01.T01:CDS
CGTCGTTGAAGAGGCGACGG+GGG 0.639284 3:-70532139 None:intergenic
AAGAGCAGTTAATAATACCC+TGG 0.639362 3:+70538105 MsG0380015461.01.T01:CDS
TTTGGACATCATCAGACACA+GGG 0.645215 3:+70538306 MsG0380015461.01.T01:intron
TATGATGCTCGATGAGACCA+AGG 0.647390 3:-70538525 None:intergenic
ATGGATCATTTAGTTATACA+GGG 0.647807 3:+70537608 MsG0380015461.01.T01:CDS
GCGTCGTTGAAGAGGCGACG+GGG 0.656683 3:-70532140 None:intergenic
CTGAGGCAAAGAACAGTGAG+AGG 0.670937 3:+70535129 MsG0380015461.01.T01:CDS
GGTTGTGGAGAGCTTGAGTG+CGG 0.677314 3:-70532114 None:intergenic
TCTCGTATTCTCTGTCTCCG+TGG 0.685958 3:+70538610 MsG0380015461.01.T01:three_prime_UTR
AGAGTATGTTCAGACCATGA+GGG 0.688263 3:+70532956 MsG0380015461.01.T01:CDS
ATGGTCTGAACATACTCTTG+AGG 0.694437 3:-70532951 None:intergenic
GGCTGCTGATCAAGCCACTG+TGG 0.703948 3:+70533460 MsG0380015461.01.T01:CDS
TGGTCTAAAAGAATCAGCTG+TGG 0.704279 3:-70537398 None:intergenic
CAGGTCTCGAAGTCTTTGCG+CGG 0.712773 3:-70532771 None:intergenic
TATGCACCAAAAGTATACTG+GGG 0.742665 3:+70535200 MsG0380015461.01.T01:CDS
ATCATTAGAAGAATCACACG+AGG 0.751033 3:-70538064 None:intergenic
GTTCACAATCAACTCCACAG+TGG 0.811760 3:-70533474 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAGATATAAAAATGA+AGG + Chr3:70536203-70536222 MsG0380015461.01.T01:intron 10.0%
!! ATAAAAGATATAAAAATGAA+GGG + Chr3:70536204-70536223 MsG0380015461.01.T01:intron 10.0%
!! TAAAATTAGAATTAAGATAA+AGG + Chr3:70534757-70534776 MsG0380015461.01.T01:intron 10.0%
!! TACTTATTATTAAAAACAAT+TGG + Chr3:70533320-70533339 MsG0380015461.01.T01:intron 10.0%
!! TTCATTTGATTATTAAAAAA+CGG + Chr3:70533634-70533653 MsG0380015461.01.T01:intron 10.0%
!!! TCACTAATTTTAAAATAATA+AGG - Chr3:70536906-70536925 None:intergenic 10.0%
!!! TTTTCTGATTATTTAATTTT+TGG + Chr3:70533991-70534010 MsG0380015461.01.T01:intron 10.0%
!! AAATAATTCAACATGTTAAA+AGG - Chr3:70537732-70537751 None:intergenic 15.0%
!! AATTTCCCATATTTATTTAT+GGG + Chr3:70537180-70537199 MsG0380015461.01.T01:intron 15.0%
!! AGTTTATCAAGAAAATAAAT+TGG + Chr3:70535519-70535538 MsG0380015461.01.T01:intron 15.0%
!! CATATATGATATTTACAATT+TGG + Chr3:70534859-70534878 MsG0380015461.01.T01:intron 15.0%
!! GTTAATTGTTAATTGAAAAT+CGG - Chr3:70531983-70532002 None:intergenic 15.0%
!! TAATTTCCCATATTTATTTA+TGG + Chr3:70537179-70537198 MsG0380015461.01.T01:intron 15.0%
!! TATGATATGAAATATATTTG+AGG - Chr3:70534253-70534272 None:intergenic 15.0%
!! TTTAAAAACAAACCTAAAAT+TGG + Chr3:70534118-70534137 MsG0380015461.01.T01:intron 15.0%
!!! AAAGTTTCACATTATTTTTA+CGG + Chr3:70534467-70534486 MsG0380015461.01.T01:intron 15.0%
!!! ATAAAATATTTTTTCTGTTG+TGG + Chr3:70534274-70534293 MsG0380015461.01.T01:intron 15.0%
!!! ATAAACATTGACATATTTTT+AGG - Chr3:70533851-70533870 None:intergenic 15.0%
!!! ATATGTCAATGTTTATTTTT+AGG + Chr3:70533855-70533874 MsG0380015461.01.T01:intron 15.0%
!!! ATTGTTATTTGGAATTTTAA+AGG + Chr3:70536953-70536972 MsG0380015461.01.T01:intron 15.0%
!!! ATTTATACTTTTCCAATTTT+AGG - Chr3:70534133-70534152 None:intergenic 15.0%
!!! ATTTTCTTGATAAACTATAT+AGG - Chr3:70535515-70535534 None:intergenic 15.0%
!!! CATTTAGTAAATTATTTTGT+CGG - Chr3:70535748-70535767 None:intergenic 15.0%
!!! TTGTTATTTCAATTGTTATT+TGG + Chr3:70536942-70536961 MsG0380015461.01.T01:intron 15.0%
!!! TTGTTATTTGGAATTTTAAA+GGG + Chr3:70536954-70536973 MsG0380015461.01.T01:intron 15.0%
!!! TTTAATTTCTCTTACATTTT+TGG + Chr3:70535983-70536002 MsG0380015461.01.T01:intron 15.0%
!!! TTTTCTTGATAAACTATATA+GGG - Chr3:70535514-70535533 None:intergenic 15.0%
!! AATTCATCAGAAAATTTAGA+AGG + Chr3:70533561-70533580 MsG0380015461.01.T01:intron 20.0%
!! CAAAAAAAAATCACTATAGA+CGG - Chr3:70538290-70538309 None:intergenic 20.0%
!! CAATTACATGAAAAAATAGA+TGG - Chr3:70537843-70537862 None:intergenic 20.0%
!! CAATTCCCATAAATAAATAT+GGG - Chr3:70537188-70537207 None:intergenic 20.0%
!! CAGATATTAAATACTTTATC+TGG - Chr3:70533059-70533078 None:intergenic 20.0%
!! CATGAATAACAAAACTAATT+AGG - Chr3:70533113-70533132 None:intergenic 20.0%
!! CTATTATTCAAATATACAAC+AGG - Chr3:70534801-70534820 None:intergenic 20.0%
!! TAAAATTAGTGAAGAGAAAA+GGG + Chr3:70536914-70536933 MsG0380015461.01.T01:intron 20.0%
!! TAACAATTAACAATAGCATA+TGG + Chr3:70531992-70532011 MsG0380015461.01.T01:exon 20.0%
!! TTAAAACTTTCATGATTTAG+CGG - Chr3:70534177-70534196 None:intergenic 20.0%
!! TTAAAATTAGTGAAGAGAAA+AGG + Chr3:70536913-70536932 MsG0380015461.01.T01:intron 20.0%
!! TTGATTATTAAAAAACGGAA+TGG + Chr3:70533639-70533658 MsG0380015461.01.T01:intron 20.0%
!! TTGTTTATTGTTCTTTCATA+TGG + Chr3:70533391-70533410 MsG0380015461.01.T01:intron 20.0%
!!! AAGTTTCACATTATTTTTAC+GGG + Chr3:70534468-70534487 MsG0380015461.01.T01:intron 20.0%
!!! AATTTCCCTAATTTACTTTT+TGG + Chr3:70538555-70538574 MsG0380015461.01.T01:three_prime_UTR 20.0%
!!! AATTTTTGCTTCTAATATGT+AGG + Chr3:70533174-70533193 MsG0380015461.01.T01:intron 20.0%
!!! ATTTCCCTAATTTACTTTTT+GGG + Chr3:70538556-70538575 MsG0380015461.01.T01:three_prime_UTR 20.0%
!!! CTGATGTTTTATACTTTATA+TGG + Chr3:70533898-70533917 MsG0380015461.01.T01:intron 20.0%
!!! GGTTTTAATCAAGAATATAA+CGG - Chr3:70534418-70534437 None:intergenic 20.0%
!!! GTTATTAATTCATCATTTTC+CGG - Chr3:70534736-70534755 None:intergenic 20.0%
!!! TATACATATTTTGCAATATG+AGG - Chr3:70535182-70535201 None:intergenic 20.0%
!!! TATTTTGAACTAGTTATAGT+GGG + Chr3:70536643-70536662 MsG0380015461.01.T01:intron 20.0%
!!! TTCTAAAACGTTAACAATAT+TGG + Chr3:70534543-70534562 MsG0380015461.01.T01:intron 20.0%
!!! TTTTCTCTTTCAATTTCTTT+CGG - Chr3:70536182-70536201 None:intergenic 20.0%
! AAAAAAGCCAAAAACTTCAA+TGG - Chr3:70537090-70537109 None:intergenic 25.0%
! AAAGACAAATTGGAAGTTAA+TGG - Chr3:70534355-70534374 None:intergenic 25.0%
! AACTGAATACACAAAAATCA+TGG - Chr3:70532406-70532425 None:intergenic 25.0%
! AACTTGGTTTAGCATTAAAT+GGG + Chr3:70538428-70538447 MsG0380015461.01.T01:CDS 25.0%
! AAGAGATAAGTTAAACAGTT+GGG - Chr3:70536456-70536475 None:intergenic 25.0%
! AAGGAATACAGTAAAAAGTT+GGG + Chr3:70537509-70537528 MsG0380015461.01.T01:CDS 25.0%
! AATGAGAAACACAAAATTAC+CGG - Chr3:70535001-70535020 None:intergenic 25.0%
! AATGTCCCAAAAAGTAAATT+AGG - Chr3:70538564-70538583 None:intergenic 25.0%
! ACAAGCAACATGTTATAAAA+AGG - Chr3:70535404-70535423 None:intergenic 25.0%
! AGCCAAACAATAAGATTATT+AGG - Chr3:70534569-70534588 None:intergenic 25.0%
! ATGGATCATTTAGTTATACA+GGG + Chr3:70537608-70537627 MsG0380015461.01.T01:CDS 25.0%
! ATGTCCCAAAAAGTAAATTA+GGG - Chr3:70538563-70538582 None:intergenic 25.0%
! CAAACATTCAAATATACAAC+AGG - Chr3:70534834-70534853 None:intergenic 25.0%
! CGTTTAACAATTCGAATTAA+TGG - Chr3:70532252-70532271 None:intergenic 25.0%
! CTAACATAAATATAGTACTC+CGG + Chr3:70538884-70538903 MsG0380015461.01.T01:three_prime_UTR 25.0%
! CTGTAAATCCCAATTAAAAT+GGG + Chr3:70538831-70538850 MsG0380015461.01.T01:three_prime_UTR 25.0%
! GAAAAAACATTTATCAGTTG+TGG - Chr3:70533617-70533636 None:intergenic 25.0%
! GATTATGAATATTCACTACA+TGG + Chr3:70532692-70532711 MsG0380015461.01.T01:intron 25.0%
! GCAATTCCCATAAATAAATA+TGG - Chr3:70537189-70537208 None:intergenic 25.0%
! GTAATTGTTCAATTAGAACA+TGG + Chr3:70537856-70537875 MsG0380015461.01.T01:intron 25.0%
! TAAAACTTTCATGATTTAGC+GGG - Chr3:70534176-70534195 None:intergenic 25.0%
! TAACTTGGTTTAGCATTAAA+TGG + Chr3:70538427-70538446 MsG0380015461.01.T01:CDS 25.0%
! TAAGAGATAAGTTAAACAGT+TGG - Chr3:70536457-70536476 None:intergenic 25.0%
! TATTATGTACTCAACACAAT+AGG + Chr3:70532879-70532898 MsG0380015461.01.T01:intron 25.0%
! TGTAACTTAACATGTAATTG+AGG - Chr3:70534077-70534096 None:intergenic 25.0%
! TTAAACGTAATCACATGTTT+CGG - Chr3:70532525-70532544 None:intergenic 25.0%
! TTTACTTACATGTAACAGAT+CGG - Chr3:70538240-70538259 None:intergenic 25.0%
!! AATTTCGAGACAAACTATTT+TGG - Chr3:70534682-70534701 None:intergenic 25.0%
!! ATTGTATGACCAAATTTTGA+CGG + Chr3:70534040-70534059 MsG0380015461.01.T01:intron 25.0%
!! CTTTAAAAATGTTATTGTCG+TGG + Chr3:70533145-70533164 MsG0380015461.01.T01:intron 25.0%
!! GAATTTTGCTTGATTTATGT+TGG + Chr3:70534973-70534992 MsG0380015461.01.T01:intron 25.0%
!! GATTTATATGCAATTTTTGC+CGG + Chr3:70537542-70537561 MsG0380015461.01.T01:CDS 25.0%
!! GTTTTATACTTTATATGGCT+GGG + Chr3:70533903-70533922 MsG0380015461.01.T01:intron 25.0%
!! TGTTTTATACTTTATATGGC+TGG + Chr3:70533902-70533921 MsG0380015461.01.T01:intron 25.0%
!! TTTTACTGGAAATACAACTT+TGG + Chr3:70538457-70538476 MsG0380015461.01.T01:CDS 25.0%
!!! AAATGTGATCATTATTTTGC+AGG + Chr3:70535763-70535782 MsG0380015461.01.T01:intron 25.0%
!!! AATTGAGAGTCATTTTGTTA+AGG - Chr3:70537345-70537364 None:intergenic 25.0%
!!! AGTTTTAAGAATTACCTATC+TGG + Chr3:70534189-70534208 MsG0380015461.01.T01:intron 25.0%
!!! AGTTTTGTTATTCATGATTG+CGG + Chr3:70533117-70533136 MsG0380015461.01.T01:intron 25.0%
!!! ATATTTTTTCTGTTGTGGTA+AGG + Chr3:70534279-70534298 MsG0380015461.01.T01:intron 25.0%
!!! CGTCTATAGTGATTTTTTTT+TGG + Chr3:70538288-70538307 MsG0380015461.01.T01:intron 25.0%
!!! CTATTTTGAACTAGTTATAG+TGG + Chr3:70536642-70536661 MsG0380015461.01.T01:intron 25.0%
!!! GAAATGCTCTGAAATAATAT+TGG + Chr3:70536226-70536245 MsG0380015461.01.T01:intron 25.0%
!!! GTTAAATTTGCTATGAACTT+TGG - Chr3:70532224-70532243 None:intergenic 25.0%
!!! GTTAACGTTTTAGAACATTA+AGG - Chr3:70534538-70534557 None:intergenic 25.0%
AAAAATGTTATTGTCGTGGT+GGG + Chr3:70533149-70533168 MsG0380015461.01.T01:intron 30.0%
AAAACTTTCATGATTTAGCG+GGG - Chr3:70534175-70534194 None:intergenic 30.0%
AAAATACCATCCTCGATAAA+AGG - Chr3:70536821-70536840 None:intergenic 30.0%
AAATACCATCCTCGATAAAA+GGG - Chr3:70536820-70536839 None:intergenic 30.0%
AACACTAAAACAGTAAAAGG+AGG - Chr3:70536709-70536728 None:intergenic 30.0%
AACATCTTGTATCATTGGAA+AGG + Chr3:70538353-70538372 MsG0380015461.01.T01:CDS 30.0%
AATAGAGTTTGAAGACTCTT+GGG - Chr3:70536615-70536634 None:intergenic 30.0%
AATTATGAAAGCAAGACTGT+AGG - Chr3:70537118-70537137 None:intergenic 30.0%
AATTCACGTCCAATTACATA+GGG - Chr3:70536045-70536064 None:intergenic 30.0%
ACCAATATTGAAAGTTCATG+TGG - Chr3:70535314-70535333 None:intergenic 30.0%
ACTCACATAAAAACAGTTCA+AGG - Chr3:70534439-70534458 None:intergenic 30.0%
AGAAATTTCTTCCCAATTTG+TGG + Chr3:70538635-70538654 MsG0380015461.01.T01:three_prime_UTR 30.0%
AGAACATTAAGGACTAGATT+TGG - Chr3:70534527-70534546 None:intergenic 30.0%
AGATGAAACATGCACTTTAT+AGG + Chr3:70538769-70538788 MsG0380015461.01.T01:three_prime_UTR 30.0%
AGCAACACTAAAACAGTAAA+AGG - Chr3:70536712-70536731 None:intergenic 30.0%
AGCTAGTTAGTTAGTTATAG+TGG + Chr3:70536417-70536436 MsG0380015461.01.T01:intron 30.0%
ATAAAGTGCATGTTTCATCT+CGG - Chr3:70538769-70538788 None:intergenic 30.0%
ATAACTAAATGATCCATGGA+CGG - Chr3:70537605-70537624 None:intergenic 30.0%
ATAGTAAATAGCAACTAACC+TGG - Chr3:70533821-70533840 None:intergenic 30.0%
ATATTGAAAGTTCATGTGGA+CGG - Chr3:70535310-70535329 None:intergenic 30.0%
ATCAAACTCCCGAAAATATA+AGG - Chr3:70535643-70535662 None:intergenic 30.0%
ATCATCAATGCAAAGAAACT+GGG - Chr3:70533734-70533753 None:intergenic 30.0%
ATTTCTCAATACAACCAGAT+AGG - Chr3:70534206-70534225 None:intergenic 30.0%
ATTTGTTCATACGATGAAAC+CGG - Chr3:70533002-70533021 None:intergenic 30.0%
CAAGGAATACAGTAAAAAGT+TGG + Chr3:70537508-70537527 MsG0380015461.01.T01:CDS 30.0%
CAATAAAATTTAGCAACGAC+TGG - Chr3:70533298-70533317 None:intergenic 30.0%
CAATACCTATAATCGAAACT+GGG - Chr3:70533518-70533537 None:intergenic 30.0%
CACTTGATAAGAAGTTAAAG+TGG + Chr3:70537218-70537237 MsG0380015461.01.T01:intron 30.0%
CATATCATGGCAATTGTTAA+TGG - Chr3:70536134-70536153 None:intergenic 30.0%
CATGGATCATTTAGTTATAC+AGG + Chr3:70537607-70537626 MsG0380015461.01.T01:CDS 30.0%
CATTAACAATTGCCATGATA+TGG + Chr3:70536132-70536151 MsG0380015461.01.T01:intron 30.0%
CTGAAAACATCTTGTATCAT+TGG + Chr3:70538348-70538367 MsG0380015461.01.T01:CDS 30.0%
CTGTATAACTAAATGATCCA+TGG - Chr3:70537609-70537628 None:intergenic 30.0%
GAAATAATTATGCTGCACTA+TGG + Chr3:70537453-70537472 MsG0380015461.01.T01:CDS 30.0%
GATATTGATCTTCAGTCATT+AGG + Chr3:70537663-70537682 MsG0380015461.01.T01:intron 30.0%
GATGTATTCATGAAAGAGTT+TGG + Chr3:70533026-70533045 MsG0380015461.01.T01:CDS 30.0%
GCTGTAAATCCCAATTAAAA+TGG + Chr3:70538830-70538849 MsG0380015461.01.T01:three_prime_UTR 30.0%
GGCCTAATAATCTTATTGTT+TGG + Chr3:70534564-70534583 MsG0380015461.01.T01:intron 30.0%
GGGACTTGATTAGAATTATT+TGG + Chr3:70534390-70534409 MsG0380015461.01.T01:intron 30.0%
GGGCAACTTAGTTAAATAAT+TGG - Chr3:70535715-70535734 None:intergenic 30.0%
GGTTATGTGAAAATGAATGT+TGG + Chr3:70532631-70532650 MsG0380015461.01.T01:intron 30.0%
GTGTCAGCTTAAAAACAAAA+AGG + Chr3:70532477-70532496 MsG0380015461.01.T01:intron 30.0%
GTTTCTCATTCATCATTCTT+GGG + Chr3:70535011-70535030 MsG0380015461.01.T01:intron 30.0%
GTTTGTTTATTGTCAATGAC+AGG + Chr3:70532917-70532936 MsG0380015461.01.T01:intron 30.0%
TAAAAATGTTATTGTCGTGG+TGG + Chr3:70533148-70533167 MsG0380015461.01.T01:intron 30.0%
TAATAGAGTTTGAAGACTCT+TGG - Chr3:70536616-70536635 None:intergenic 30.0%
TAGTAAATAGCAACTAACCT+GGG - Chr3:70533820-70533839 None:intergenic 30.0%
TCCACATGAACTTTCAATAT+TGG + Chr3:70535310-70535329 MsG0380015461.01.T01:CDS 30.0%
TCTTGTAACAATACCAAAGA+AGG - Chr3:70534924-70534943 None:intergenic 30.0%
TGAAGACCATTAAGAAACTA+GGG + Chr3:70535282-70535301 MsG0380015461.01.T01:CDS 30.0%
TGTTTCTCATTCATCATTCT+TGG + Chr3:70535010-70535029 MsG0380015461.01.T01:intron 30.0%
TTCGATCACAAGTTTAGTAA+TGG - Chr3:70538161-70538180 None:intergenic 30.0%
TTTACCACAATTTCACCTAA+AGG - Chr3:70536567-70536586 None:intergenic 30.0%
TTTATGGGAATTGCTAACAA+TGG + Chr3:70537195-70537214 MsG0380015461.01.T01:intron 30.0%
! AAAGGGGTATATCATATATG+AGG - Chr3:70536741-70536760 None:intergenic 30.0%
! AACTTCCAATTTGTCTTTTG+AGG + Chr3:70534357-70534376 MsG0380015461.01.T01:intron 30.0%
! AAGGGGTATATCATATATGA+GGG - Chr3:70536740-70536759 None:intergenic 30.0%
! AATTTTACTGCGCATTTATG+CGG + Chr3:70534223-70534242 MsG0380015461.01.T01:intron 30.0%
! ACAGTCTTGCCTTATATTTT+CGG + Chr3:70535631-70535650 MsG0380015461.01.T01:intron 30.0%
! ATAATATTGGAGTATCCTGT+TGG + Chr3:70536239-70536258 MsG0380015461.01.T01:intron 30.0%
! ATATGCACCAAAAGTATACT+GGG + Chr3:70535199-70535218 MsG0380015461.01.T01:CDS 30.0%
! CAGTCGTTGCTAAATTTTAT+TGG + Chr3:70533296-70533315 MsG0380015461.01.T01:intron 30.0%
! GAGTATTTAGAGCTGATTAA+GGG + Chr3:70532292-70532311 MsG0380015461.01.T01:intron 30.0%
! TAAAGTGGCAATTTTACCTT+GGG + Chr3:70537233-70537252 MsG0380015461.01.T01:intron 30.0%
! TAAATGGGACAAGATTTTAC+TGG + Chr3:70538443-70538462 MsG0380015461.01.T01:CDS 30.0%
! TATATGCACCAAAAGTATAC+TGG + Chr3:70535198-70535217 MsG0380015461.01.T01:CDS 30.0%
! TCTGTCCAAACATAATTTTG+AGG - Chr3:70538719-70538738 None:intergenic 30.0%
! TGTCTCGAAATTAACGTTTT+AGG + Chr3:70534690-70534709 MsG0380015461.01.T01:intron 30.0%
! TTAAAGTGGCAATTTTACCT+TGG + Chr3:70537232-70537251 MsG0380015461.01.T01:intron 30.0%
! TTGGATATTTTTCTTCTGCT+TGG + Chr3:70533339-70533358 MsG0380015461.01.T01:intron 30.0%
! TTTTTCCCAGTTTCGATTAT+AGG + Chr3:70533510-70533529 MsG0380015461.01.T01:CDS 30.0%
!! AATTTAATTTGGGGGCTTAA+GGG + Chr3:70536081-70536100 MsG0380015461.01.T01:intron 30.0%
!! ATAAGTTGGTTAGTGATTTC+TGG - Chr3:70536344-70536363 None:intergenic 30.0%
!! ATATATAGAAGCACCTTCTT+TGG + Chr3:70534908-70534927 MsG0380015461.01.T01:intron 30.0%
!! TAAGTTGATGAAACTTGATG+CGG + Chr3:70532317-70532336 MsG0380015461.01.T01:intron 30.0%
!! TGCACTTTTCCCATTTTAAT+TGG - Chr3:70538843-70538862 None:intergenic 30.0%
!! TTGTATGACCAAATTTTGAC+GGG + Chr3:70534041-70534060 MsG0380015461.01.T01:intron 30.0%
!! TTTCAAGCTTCTTTTTCATC+AGG - Chr3:70537972-70537991 None:intergenic 30.0%
!!! AAAGCAAGTCAGTTTTAACT+TGG + Chr3:70538412-70538431 MsG0380015461.01.T01:CDS 30.0%
!!! AATTTTTGGAGCAAAGAAGT+TGG + Chr3:70534005-70534024 MsG0380015461.01.T01:intron 30.0%
!!! ACAAATTGATTTTTAGTGCG+TGG + Chr3:70538678-70538697 MsG0380015461.01.T01:three_prime_UTR 30.0%
!!! CTTAACTTTTTCACATGAAC+AGG + Chr3:70537365-70537384 MsG0380015461.01.T01:intron 30.0%
!!! CTTGATCATTGTTTTGATTG+TGG + Chr3:70532376-70532395 MsG0380015461.01.T01:intron 30.0%
!!! GCACTTTTCCCATTTTAATT+GGG - Chr3:70538842-70538861 None:intergenic 30.0%
!!! TAGTGCGTGGTTTTTATTTT+TGG + Chr3:70538691-70538710 MsG0380015461.01.T01:three_prime_UTR 30.0%
!!! TATTTTGGTCCATCGAAAAT+GGG - Chr3:70534667-70534686 None:intergenic 30.0%
AAAAGATGTCAGTCATTGCA+CGG - Chr3:70536391-70536410 None:intergenic 35.0%
AAACTTGGAATATGACCTCT+TGG + Chr3:70535673-70535692 MsG0380015461.01.T01:intron 35.0%
AACATGATATTGTACGTACC+AGG - Chr3:70538126-70538145 None:intergenic 35.0%
AAGAGCAGTTAATAATACCC+TGG + Chr3:70538105-70538124 MsG0380015461.01.T01:CDS 35.0%
AATACCATCCTCGATAAAAG+GGG - Chr3:70536819-70536838 None:intergenic 35.0%
AATAGCATATGGCATCGTTA+TGG + Chr3:70532003-70532022 MsG0380015461.01.T01:exon 35.0%
AATATGACCTCTTGGTTACA+TGG + Chr3:70535681-70535700 MsG0380015461.01.T01:intron 35.0%
AATTCTGCTCTTAAGTAGGA+GGG + Chr3:70536012-70536031 MsG0380015461.01.T01:intron 35.0%
AATTGGACGTGAATTGCAAA+TGG + Chr3:70536050-70536069 MsG0380015461.01.T01:intron 35.0%
ACAAATCAGAACCAAAAAGC+TGG - Chr3:70534599-70534618 None:intergenic 35.0%
ACAATTTCACCTAAAGGACA+AGG - Chr3:70536561-70536580 None:intergenic 35.0%
ACATAGATCCTCTTTATGAG+TGG + Chr3:70536489-70536508 MsG0380015461.01.T01:intron 35.0%
ACATGATATTGTACGTACCA+GGG - Chr3:70538125-70538144 None:intergenic 35.0%
ACTAAAACAGTAAAAGGAGG+AGG - Chr3:70536706-70536725 None:intergenic 35.0%
AGTAAATAGCAACTAACCTG+GGG - Chr3:70533819-70533838 None:intergenic 35.0%
ATAAAGCTTGGACAACATCT+TGG + Chr3:70532818-70532837 MsG0380015461.01.T01:CDS 35.0%
ATATTATGACTGCCAGGAAT+TGG + Chr3:70535097-70535116 MsG0380015461.01.T01:intron 35.0%
ATATTCACTACATGGAGTTC+CGG + Chr3:70532700-70532719 MsG0380015461.01.T01:CDS 35.0%
ATCACTAATCATCTAGCAGA+AGG - Chr3:70535066-70535085 None:intergenic 35.0%
ATCATTAGAAGAATCACACG+AGG - Chr3:70538067-70538086 None:intergenic 35.0%
ATCTTACCTGCATTTCTGAA+CGG - Chr3:70537646-70537665 None:intergenic 35.0%
ATGAAATCTCTGAGCTTCTA+AGG + Chr3:70538035-70538054 MsG0380015461.01.T01:CDS 35.0%
ATTAGTGAAGAGAAAAGGGT+AGG + Chr3:70536918-70536937 MsG0380015461.01.T01:intron 35.0%
ATTCACGTCCAATTACATAG+GGG - Chr3:70536044-70536063 None:intergenic 35.0%
ATTGGACGTGAATTGCAAAT+GGG + Chr3:70536051-70536070 MsG0380015461.01.T01:intron 35.0%
CAAGTTCTTTATAGAGTCCA+TGG - Chr3:70537421-70537440 None:intergenic 35.0%
CAATTCACGTCCAATTACAT+AGG - Chr3:70536046-70536065 None:intergenic 35.0%
CAGTTAAAAAGTCCAATTCC+TGG - Chr3:70535112-70535131 None:intergenic 35.0%
CATATTCCAAGTTTGAGTCA+TGG - Chr3:70535667-70535686 None:intergenic 35.0%
CATTGCTGAATTTACAAGCA+TGG + Chr3:70537937-70537956 MsG0380015461.01.T01:intron 35.0%
CATTTATCAGTTGTGGTTAC+TGG - Chr3:70533610-70533629 None:intergenic 35.0%
CCAATCCTCAAAAGACAAAT+TGG - Chr3:70534365-70534384 None:intergenic 35.0%
CTGCTAGATGATTAGTGATT+TGG + Chr3:70535067-70535086 MsG0380015461.01.T01:intron 35.0%
CTTACAATGGAATACGTAGA+TGG + Chr3:70535242-70535261 MsG0380015461.01.T01:CDS 35.0%
GAACAGGATCACTGATATTT+AGG - Chr3:70537068-70537087 None:intergenic 35.0%
GAAGATGAGACATTATGAAG+AGG - Chr3:70533089-70533108 None:intergenic 35.0%
GATCATCAATGCAAAGAAAC+TGG - Chr3:70533735-70533754 None:intergenic 35.0%
GCAATACCTATAATCGAAAC+TGG - Chr3:70533519-70533538 None:intergenic 35.0%
GGAGGGATTTATATAAAGCT+TGG + Chr3:70532806-70532825 MsG0380015461.01.T01:CDS 35.0%
GTGAAGACCATTAAGAAACT+AGG + Chr3:70535281-70535300 MsG0380015461.01.T01:CDS 35.0%
TAAAGCTTGGACAACATCTT+GGG + Chr3:70532819-70532838 MsG0380015461.01.T01:CDS 35.0%
TAACTAAATGATCCATGGAC+GGG - Chr3:70537604-70537623 None:intergenic 35.0%
TAATTATGCTGCACTATGGA+AGG + Chr3:70537457-70537476 MsG0380015461.01.T01:CDS 35.0%
TAATTCTGCTCTTAAGTAGG+AGG + Chr3:70536011-70536030 MsG0380015461.01.T01:intron 35.0%
TATAGACGGAAACAACAACT+TGG - Chr3:70538276-70538295 None:intergenic 35.0%
TATGGTATCTGTCAATGTAC+AGG + Chr3:70533409-70533428 MsG0380015461.01.T01:intron 35.0%
TATGTGATCAAACTCATCAG+AGG - Chr3:70535436-70535455 None:intergenic 35.0%
TCAAGTTTCCCGTCAAAATT+TGG - Chr3:70534052-70534071 None:intergenic 35.0%
TCACTGATATTTAGGAGACA+TGG - Chr3:70537060-70537079 None:intergenic 35.0%
TCATCAATGCAAAGAAACTG+GGG - Chr3:70533733-70533752 None:intergenic 35.0%
TGAAATTGTGGTAAACTGTG+TGG + Chr3:70536572-70536591 MsG0380015461.01.T01:intron 35.0%
TGCTAATTCTGCTCTTAAGT+AGG + Chr3:70536008-70536027 MsG0380015461.01.T01:intron 35.0%
TGCTTGATTTATGTTGGATC+CGG + Chr3:70534979-70534998 MsG0380015461.01.T01:intron 35.0%
TGGAGCCTCAAAATTATGTT+TGG + Chr3:70538711-70538730 MsG0380015461.01.T01:three_prime_UTR 35.0%
TGTATTCGTGTTCCATATCA+TGG - Chr3:70536147-70536166 None:intergenic 35.0%
TTAGAAGCTCAGAGATTTCA+TGG - Chr3:70538036-70538055 None:intergenic 35.0%
TTCAATACACATGTTGATGC+TGG + Chr3:70537750-70537769 MsG0380015461.01.T01:intron 35.0%
TTCCATTGTAAGCAACTTTG+AGG - Chr3:70535234-70535253 None:intergenic 35.0%
TTCCTCAAAGTTGCTTACAA+TGG + Chr3:70535229-70535248 MsG0380015461.01.T01:CDS 35.0%
TTCTGTTTACTTCTGTTTGC+AGG + Chr3:70533763-70533782 MsG0380015461.01.T01:intron 35.0%
TTGATTCCATGACTCAAACT+TGG + Chr3:70535658-70535677 MsG0380015461.01.T01:intron 35.0%
TTGTCCTTTAGGTGAAATTG+TGG + Chr3:70536560-70536579 MsG0380015461.01.T01:intron 35.0%
TTGTTCATATTATGACTGCC+AGG + Chr3:70535091-70535110 MsG0380015461.01.T01:intron 35.0%
TTTCAGTCATGTGAGAATGT+TGG - Chr3:70533436-70533455 None:intergenic 35.0%
! AAGTTCAAGTTTGCAAGCAA+AGG - Chr3:70535909-70535928 None:intergenic 35.0%
! ACAGCACTTTGTAGTTTGTA+TGG + Chr3:70537026-70537045 MsG0380015461.01.T01:intron 35.0%
! ACTAGTTATAGTGGGATTGA+TGG + Chr3:70536651-70536670 MsG0380015461.01.T01:intron 35.0%
! AGGTATTGCTATGATGCTAT+TGG + Chr3:70533530-70533549 MsG0380015461.01.T01:intron 35.0%
! CAGCACTTTGTAGTTTGTAT+GGG + Chr3:70537027-70537046 MsG0380015461.01.T01:intron 35.0%
! CAGTCTTGCCTTATATTTTC+GGG + Chr3:70535632-70535651 MsG0380015461.01.T01:intron 35.0%
! CGAGTATTTAGAGCTGATTA+AGG + Chr3:70532291-70532310 MsG0380015461.01.T01:intron 35.0%
! CTTGGGCAATTGGTATATTT+TGG + Chr3:70532836-70532855 MsG0380015461.01.T01:intron 35.0%
! GAGTGACTTGTCAGTTAAAA+GGG - Chr3:70536322-70536341 None:intergenic 35.0%
! GTAAGGTTTTCATGTCAAGA+TGG + Chr3:70534296-70534315 MsG0380015461.01.T01:intron 35.0%
! TATGCACCAAAAGTATACTG+GGG + Chr3:70535200-70535219 MsG0380015461.01.T01:CDS 35.0%
! TCCTGTTCCATTGAAGTTTT+TGG + Chr3:70537080-70537099 MsG0380015461.01.T01:intron 35.0%
!! ATTTGTCTTTTGAGGATTGG+AGG + Chr3:70534365-70534384 MsG0380015461.01.T01:intron 35.0%
!! CCAATTTGTCTTTTGAGGAT+TGG + Chr3:70534362-70534381 MsG0380015461.01.T01:intron 35.0%
!! GAATTTAATTTGGGGGCTTA+AGG + Chr3:70536080-70536099 MsG0380015461.01.T01:intron 35.0%
!! GGAATTGGACTTTTTAACTG+AGG + Chr3:70535112-70535131 MsG0380015461.01.T01:intron 35.0%
!! TTTTGATTCCCTCATGCAAT+TGG + Chr3:70535486-70535505 MsG0380015461.01.T01:intron 35.0%
!!! ACCTGTGTTTTAAGAATGGA+GGG + Chr3:70532789-70532808 MsG0380015461.01.T01:CDS 35.0%
!!! AGCTTTTTGGTTCTGATTTG+TGG + Chr3:70534598-70534617 MsG0380015461.01.T01:intron 35.0%
!!! AGTTTTGTTTCTTTGTGCTG+TGG + Chr3:70532666-70532685 MsG0380015461.01.T01:intron 35.0%
!!! ATTTTTAGGTTCTTGCCTAC+TGG + Chr3:70533869-70533888 MsG0380015461.01.T01:intron 35.0%
!!! CTAGCTAGATTAGTTTTGTC+AGG + Chr3:70534951-70534970 MsG0380015461.01.T01:intron 35.0%
!!! CTATTTTGGTCCATCGAAAA+TGG - Chr3:70534668-70534687 None:intergenic 35.0%
!!! TTCACATTATTTTTACGGGC+AGG + Chr3:70534472-70534491 MsG0380015461.01.T01:intron 35.0%
AAACATCAGTCTAGTCCAGT+AGG - Chr3:70533887-70533906 None:intergenic 40.0%
AACCGGACATCTATTTAGCA+TGG - Chr3:70532985-70533004 None:intergenic 40.0%
AAGAATCAGACCCACTATGT+GGG + Chr3:70535598-70535617 MsG0380015461.01.T01:intron 40.0%
AAGGGAAAATGATGGCAAGT+TGG + Chr3:70536099-70536118 MsG0380015461.01.T01:intron 40.0%
AATTGGAACTGGATCGAACT+CGG - Chr3:70533206-70533225 None:intergenic 40.0%
ACAACAACACCACTGATCAT+TGG - Chr3:70535372-70535391 None:intergenic 40.0%
ACAGAAGATCCAAGATTTGG+AGG + Chr3:70538734-70538753 MsG0380015461.01.T01:three_prime_UTR 40.0%
ACAGTAAAAAGTTGGGTGCT+GGG + Chr3:70537516-70537535 MsG0380015461.01.T01:CDS 40.0%
ACCAACATATTAGCAGCATG+TGG - Chr3:70535842-70535861 None:intergenic 40.0%
ACGGATCCCTAGTTTCTTAA+TGG - Chr3:70535291-70535310 None:intergenic 40.0%
ACGTGAATTGCAAATGGGAA+GGG + Chr3:70536056-70536075 MsG0380015461.01.T01:intron 40.0%
AGAGTATGTTCAGACCATGA+GGG + Chr3:70532956-70532975 MsG0380015461.01.T01:CDS 40.0%
AGCTACATGAACTTGTGCAA+GGG - Chr3:70533239-70533258 None:intergenic 40.0%
ATCAATGCAAAGAAACTGGG+GGG - Chr3:70533731-70533750 None:intergenic 40.0%
ATGGTCTGAACATACTCTTG+AGG - Chr3:70532954-70532973 None:intergenic 40.0%
CAATATGAGGAGACAAGTTG+CGG - Chr3:70535169-70535188 None:intergenic 40.0%
CACAAGTTTAGTAATGGCAG+TGG - Chr3:70538155-70538174 None:intergenic 40.0%
CAGTTAAAAGGGAGAGCTTA+GGG - Chr3:70536311-70536330 None:intergenic 40.0%
CATCAATGCAAAGAAACTGG+GGG - Chr3:70533732-70533751 None:intergenic 40.0%
CATGCATGACGATATTGAAC+CGG + Chr3:70534714-70534733 MsG0380015461.01.T01:intron 40.0%
CTACTATTGACCCACATAGT+GGG - Chr3:70535611-70535630 None:intergenic 40.0%
CTATGCGTGTAATCCATAGA+AGG + Chr3:70535574-70535593 MsG0380015461.01.T01:intron 40.0%
CTCACACAAAGCCACAAATT+GGG - Chr3:70538649-70538668 None:intergenic 40.0%
CTGAAATGATGTTCAAGCAC+GGG + Chr3:70535801-70535820 MsG0380015461.01.T01:CDS 40.0%
GCCAAAAACTTCAATGGAAC+AGG - Chr3:70537084-70537103 None:intergenic 40.0%
GCTGAAATGATGTTCAAGCA+CGG + Chr3:70535800-70535819 MsG0380015461.01.T01:CDS 40.0%
GGGTATATCATATATGAGGG+AGG - Chr3:70536737-70536756 None:intergenic 40.0%
GGTCTGATTCTTACCTTCTA+TGG - Chr3:70535590-70535609 None:intergenic 40.0%
GTAGAAGACCACTCATAAAG+AGG - Chr3:70536500-70536519 None:intergenic 40.0%
GTCCATGCTAAATAGATGTC+CGG + Chr3:70532980-70532999 MsG0380015461.01.T01:CDS 40.0%
TAAGAATCAGACCCACTATG+TGG + Chr3:70535597-70535616 MsG0380015461.01.T01:intron 40.0%
TACAGTAAAAAGTTGGGTGC+TGG + Chr3:70537515-70537534 MsG0380015461.01.T01:CDS 40.0%
TACAGTACCAAACACGATGT+TGG - Chr3:70532177-70532196 None:intergenic 40.0%
TACTCGTTCGAATGCTTCAA+TGG - Chr3:70532277-70532296 None:intergenic 40.0%
TCAGTTAAAAGGGAGAGCTT+AGG - Chr3:70536312-70536331 None:intergenic 40.0%
TCAGTTTCTCCTTGTCCTTT+AGG + Chr3:70536549-70536568 MsG0380015461.01.T01:intron 40.0%
TCCACATGCTGCTAATATGT+TGG + Chr3:70535838-70535857 MsG0380015461.01.T01:CDS 40.0%
TCCCTCCATTCTTAAAACAC+AGG - Chr3:70532793-70532812 None:intergenic 40.0%
TCTACTATTGACCCACATAG+TGG - Chr3:70535612-70535631 None:intergenic 40.0%
TGCTGATGCTAATGCAATCA+AGG + Chr3:70537490-70537509 MsG0380015461.01.T01:CDS 40.0%
TGGACAGAAGATCCAAGATT+TGG + Chr3:70538731-70538750 MsG0380015461.01.T01:three_prime_UTR 40.0%
TGGGAAGAAATTTCTGACCA+CGG - Chr3:70538630-70538649 None:intergenic 40.0%
TGGGAAGGGGGAATTTAATT+TGG + Chr3:70536070-70536089 MsG0380015461.01.T01:intron 40.0%
TGGTCTAAAAGAATCAGCTG+TGG - Chr3:70537401-70537420 None:intergenic 40.0%
TGTCTGTGTTAGTGCTTCAT+AGG + Chr3:70532610-70532629 MsG0380015461.01.T01:intron 40.0%
TGTTGAATACACAACTCCCA+AGG - Chr3:70537252-70537271 None:intergenic 40.0%
TGTTTACTTCTGTTTGCAGG+TGG + Chr3:70533766-70533785 MsG0380015461.01.T01:intron 40.0%
TTCACGTCCAATTACATAGG+GGG - Chr3:70536043-70536062 None:intergenic 40.0%
TTCTCACATGACTGAAACTG+CGG + Chr3:70533439-70533458 MsG0380015461.01.T01:CDS 40.0%
TTCTCACTTGTAAAAGCCAC+AGG - Chr3:70538497-70538516 None:intergenic 40.0%
TTGTGGTGCAATTAATGCAG+TGG + Chr3:70534615-70534634 MsG0380015461.01.T01:intron 40.0%
TTTGGACATCATCAGACACA+GGG + Chr3:70538306-70538325 MsG0380015461.01.T01:intron 40.0%
TTTGGATAGCCTCCAAATCT+TGG - Chr3:70538746-70538765 None:intergenic 40.0%
! AAGAGTATGTTCAGACCATG+AGG + Chr3:70532955-70532974 MsG0380015461.01.T01:CDS 40.0%
! AGAAACTGAAAGCATAGCAG+AGG - Chr3:70536538-70536557 None:intergenic 40.0%
! ATAGGGTACCAATTGCATGA+GGG - Chr3:70535497-70535516 None:intergenic 40.0%
! ATTTTGTCGGTCAGCTGAAA+GGG - Chr3:70535735-70535754 None:intergenic 40.0%
! GGAGTGACTTGTCAGTTAAA+AGG - Chr3:70536323-70536342 None:intergenic 40.0%
! GGGAAGGGGGAATTTAATTT+GGG + Chr3:70536071-70536090 MsG0380015461.01.T01:intron 40.0%
! GTGGCTTTTACAAGTGAGAA+AGG + Chr3:70538497-70538516 MsG0380015461.01.T01:CDS 40.0%
! TATAGGGTACCAATTGCATG+AGG - Chr3:70535498-70535517 None:intergenic 40.0%
! TATTTTGTCGGTCAGCTGAA+AGG - Chr3:70535736-70535755 None:intergenic 40.0%
! TTTGCATCTCCCATTTTCGA+TGG + Chr3:70534655-70534674 MsG0380015461.01.T01:intron 40.0%
! TTTTGGACATCATCAGACAC+AGG + Chr3:70538305-70538324 MsG0380015461.01.T01:intron 40.0%
!! AAAGAACAGTGAGAGGTGTT+TGG + Chr3:70535136-70535155 MsG0380015461.01.T01:CDS 40.0%
!! CAGCTGATTCTTTTAGACCA+TGG + Chr3:70537401-70537420 MsG0380015461.01.T01:CDS 40.0%
!! GAAGGGGGAATTTAATTTGG+GGG + Chr3:70536073-70536092 MsG0380015461.01.T01:intron 40.0%
!! GAGTATTGGAGGTTTATGTG+GGG - Chr3:70536980-70536999 None:intergenic 40.0%
!! GGAAGGGGGAATTTAATTTG+GGG + Chr3:70536072-70536091 MsG0380015461.01.T01:intron 40.0%
!! GGAGTATTGGAGGTTTATGT+GGG - Chr3:70536981-70537000 None:intergenic 40.0%
!!! ACTTTTTCACATGAACAGGC+TGG + Chr3:70537369-70537388 MsG0380015461.01.T01:intron 40.0%
!!! CGAGACCTGTGTTTTAAGAA+TGG + Chr3:70532785-70532804 MsG0380015461.01.T01:CDS 40.0%
!!! GACCTGTGTTTTAAGAATGG+AGG + Chr3:70532788-70532807 MsG0380015461.01.T01:CDS 40.0%
AACACCACTGATCATTGGAC+TGG - Chr3:70535367-70535386 None:intergenic 45.0%
AGCTTGAAGCAAGAGGATGT+AGG - Chr3:70537004-70537023 None:intergenic 45.0%
AGGCTGTCATTGACGCAAAA+AGG + Chr3:70538385-70538404 MsG0380015461.01.T01:CDS 45.0%
AGGTCTCATTGTTAGAGCTC+CGG - Chr3:70537564-70537583 None:intergenic 45.0%
AGTACCAAACACGATGTTGG+CGG - Chr3:70532174-70532193 None:intergenic 45.0%
ATTTAGCATGGACTCCCTCA+TGG - Chr3:70532973-70532992 None:intergenic 45.0%
CAAAGCTAGCATTCTGGGTA+AGG + Chr3:70535880-70535899 MsG0380015461.01.T01:intron 45.0%
CAAGGAGTCACTTACAGTAC+TGG - Chr3:70536783-70536802 None:intergenic 45.0%
CAGCTAAAGTCTGTACCTCA+TGG + Chr3:70536861-70536880 MsG0380015461.01.T01:intron 45.0%
CATGATTTAGCGGGGAGAAA+AGG - Chr3:70534167-70534186 None:intergenic 45.0%
CATTGGAAAGGTTTCTTCCG+AGG + Chr3:70538365-70538384 MsG0380015461.01.T01:CDS 45.0%
CCACAAATCAAGTCTCCATG+AGG - Chr3:70536879-70536898 None:intergenic 45.0%
CGTGAATTGCAAATGGGAAG+GGG + Chr3:70536057-70536076 MsG0380015461.01.T01:intron 45.0%
CTAACACAGACATGCACACT+AGG - Chr3:70532602-70532621 None:intergenic 45.0%
CTTGAAGCAAGAGGATGTAG+GGG - Chr3:70537002-70537021 None:intergenic 45.0%
GAACCTTCACAGCAACTTGT+TGG - Chr3:70533276-70533295 None:intergenic 45.0%
GACGTGAATTGCAAATGGGA+AGG + Chr3:70536055-70536074 MsG0380015461.01.T01:intron 45.0%
GAGCTACATGAACTTGTGCA+AGG - Chr3:70533240-70533259 None:intergenic 45.0%
GATTAAAGAGAGTTTGCCCC+AGG + Chr3:70533800-70533819 MsG0380015461.01.T01:CDS 45.0%
GCTCACACAAAGCCACAAAT+TGG - Chr3:70538650-70538669 None:intergenic 45.0%
GCTTGAAGCAAGAGGATGTA+GGG - Chr3:70537003-70537022 None:intergenic 45.0%
GGAAAATGCAGATGTTCCTG+TGG + Chr3:70538478-70538497 MsG0380015461.01.T01:CDS 45.0%
GGGTCGACAACTTTATTCCA+AGG - Chr3:70537584-70537603 None:intergenic 45.0%
GGTTGCAAGTAGAGATAGCT+TGG - Chr3:70532039-70532058 None:intergenic 45.0%
GTACAGACTTTAGCTGAGCT+GGG - Chr3:70536857-70536876 None:intergenic 45.0%
GTCATTGCACGGTGGTTATA+TGG - Chr3:70536380-70536399 None:intergenic 45.0%
GTGAATTGCAAATGGGAAGG+GGG + Chr3:70536058-70536077 MsG0380015461.01.T01:intron 45.0%
GTGCATGTTTCATCTCGGTT+TGG - Chr3:70538764-70538783 None:intergenic 45.0%
GTTCACAATCAACTCCACAG+TGG - Chr3:70533477-70533496 None:intergenic 45.0%
TACGGGCAGGATTACTTTGT+TGG + Chr3:70534485-70534504 MsG0380015461.01.T01:intron 45.0%
TATGATGCTCGATGAGACCA+AGG - Chr3:70538528-70538547 None:intergenic 45.0%
TCCAGCAAAGCTAGCATTCT+GGG + Chr3:70535875-70535894 MsG0380015461.01.T01:CDS 45.0%
TGGACAACATCTTGGGCAAT+TGG + Chr3:70532826-70532845 MsG0380015461.01.T01:CDS 45.0%
TGGTAAACTGTGTGGCATCT+TGG + Chr3:70536580-70536599 MsG0380015461.01.T01:intron 45.0%
TTCCAGCAAAGCTAGCATTC+TGG + Chr3:70535874-70535893 MsG0380015461.01.T01:CDS 45.0%
TTGCACGGTGGTTATATGGA+CGG - Chr3:70536376-70536395 None:intergenic 45.0%
! AAGAGGATGTAGGGGAGTAT+TGG - Chr3:70536994-70537013 None:intergenic 45.0%
! ACTTACAGTACTGGAGGCTA+CGG - Chr3:70536774-70536793 None:intergenic 45.0%
! ATGGATTACACGCATAGCGA+TGG - Chr3:70535571-70535590 None:intergenic 45.0%
! CAGTAAAAAGTTGGGTGCTG+GGG + Chr3:70537517-70537536 MsG0380015461.01.T01:CDS 45.0%
! CCTCATGGAGACTTGATTTG+TGG + Chr3:70536876-70536895 MsG0380015461.01.T01:intron 45.0%
! CTCAGACCCCAGTATACTTT+TGG - Chr3:70535209-70535228 None:intergenic 45.0%
! CTGAAAGCATAGCAGAGGAT+TGG - Chr3:70536533-70536552 None:intergenic 45.0%
! CTTCTGATTGAAGGCGTGTA+AGG + Chr3:70532453-70532472 MsG0380015461.01.T01:intron 45.0%
! GAAGCACTTGCAATTGGAAC+TGG - Chr3:70533217-70533236 None:intergenic 45.0%
! GAGCTCTAACAATGAGACCT+TGG + Chr3:70537564-70537583 MsG0380015461.01.T01:CDS 45.0%
! GCACTGACACTTCTGATTGA+AGG + Chr3:70532444-70532463 MsG0380015461.01.T01:intron 45.0%
! GGCTTTCTACACCAGCTTTT+TGG + Chr3:70534585-70534604 MsG0380015461.01.T01:intron 45.0%
! TAGCTTTGCTGGAAGGCAAT+GGG - Chr3:70535868-70535887 None:intergenic 45.0%
! TTTTGCGTCAATGACAGCCT+CGG - Chr3:70538385-70538404 None:intergenic 45.0%
!! AAGTGAGAAAGGCATTGCCT+TGG + Chr3:70538508-70538527 MsG0380015461.01.T01:CDS 45.0%
!! AATGCAGTGGATTGTACCTG+TGG + Chr3:70534628-70534647 MsG0380015461.01.T01:intron 45.0%
!! AGAATGCTAGCTTTGCTGGA+AGG - Chr3:70535875-70535894 None:intergenic 45.0%
!! GGGAGTATTGGAGGTTTATG+TGG - Chr3:70536982-70537001 None:intergenic 45.0%
!! GTCTTTTGAGGATTGGAGGT+GGG + Chr3:70534369-70534388 MsG0380015461.01.T01:intron 45.0%
!! TCTTTTGAGGATTGGAGGTG+GGG + Chr3:70534370-70534389 MsG0380015461.01.T01:intron 45.0%
!! TGTCTTTTGAGGATTGGAGG+TGG + Chr3:70534368-70534387 MsG0380015461.01.T01:intron 45.0%
!! TTTGTGGCTTTGTGTGAGCA+CGG + Chr3:70538651-70538670 MsG0380015461.01.T01:three_prime_UTR 45.0%
!! AAATAAAAAATTGTAAAAAT+AGG - Chr3:70537157-70537176 None:intergenic 5.0%
ACACTAGGCACACACTGACA+CGG - Chr3:70532587-70532606 None:intergenic 50.0%
ACCATCCTCGATAAAAGGGG+TGG - Chr3:70536816-70536835 None:intergenic 50.0%
AGATGTCAGTCATTGCACGG+TGG - Chr3:70536388-70536407 None:intergenic 50.0%
ATCCTCGATAAAAGGGGTGG+AGG - Chr3:70536813-70536832 None:intergenic 50.0%
ATTTAGCGGGGAGAAAAGGC+AGG - Chr3:70534163-70534182 None:intergenic 50.0%
CACTACATGGAGTTCCGGAA+GGG + Chr3:70532705-70532724 MsG0380015461.01.T01:CDS 50.0%
CATGTAGCTCGCACACATGA+TGG + Chr3:70533250-70533269 MsG0380015461.01.T01:CDS 50.0%
CTACGGGTCAAAGGTCAAAG+GGG - Chr3:70536757-70536776 None:intergenic 50.0%
CTGAGGCAAAGAACAGTGAG+AGG + Chr3:70535129-70535148 MsG0380015461.01.T01:CDS 50.0%
GACGGGAGGGGATTATAAGT+TGG - Chr3:70536358-70536377 None:intergenic 50.0%
GAGTGACCGTTCAGAAATGC+AGG + Chr3:70537637-70537656 MsG0380015461.01.T01:CDS 50.0%
GATGCCAGTCCAATGATCAG+TGG + Chr3:70535360-70535379 MsG0380015461.01.T01:intron 50.0%
GCTACGGGTCAAAGGTCAAA+GGG - Chr3:70536758-70536777 None:intergenic 50.0%
GCTGTTGAGCTTGAAGCAAG+AGG - Chr3:70537011-70537030 None:intergenic 50.0%
GGGGGCTTAAGGGAAAATGA+TGG + Chr3:70536091-70536110 MsG0380015461.01.T01:intron 50.0%
GGTACAGACTTTAGCTGAGC+TGG - Chr3:70536858-70536877 None:intergenic 50.0%
GGTCTCTCCCCCTATGTAAT+TGG + Chr3:70536033-70536052 MsG0380015461.01.T01:intron 50.0%
GTTGCTGCCATGTAACCAAG+AGG - Chr3:70535691-70535710 None:intergenic 50.0%
TAAAGTTGTCGACCCGTCCA+TGG + Chr3:70537589-70537608 MsG0380015461.01.T01:CDS 50.0%
TACACGCATAGCGATGGATG+CGG - Chr3:70535565-70535584 None:intergenic 50.0%
TCACTACATGGAGTTCCGGA+AGG + Chr3:70532704-70532723 MsG0380015461.01.T01:CDS 50.0%
TCAGACACAGGGATCACTAC+TGG + Chr3:70538317-70538336 MsG0380015461.01.T01:intron 50.0%
TCCCTCTCAATACTCCCTTC+CGG - Chr3:70532722-70532741 None:intergenic 50.0%
TCTCGTATTCTCTGTCTCCG+TGG + Chr3:70538610-70538629 MsG0380015461.01.T01:three_prime_UTR 50.0%
TCTCTACTTGCAACCGCCAT+CGG + Chr3:70532044-70532063 MsG0380015461.01.T01:CDS 50.0%
TGCACGGTGGTTATATGGAC+GGG - Chr3:70536375-70536394 None:intergenic 50.0%
TGGCCAACAAGTTGCTGTGA+AGG + Chr3:70533270-70533289 MsG0380015461.01.T01:CDS 50.0%
! ATCCTCCACCCCTTTTATCG+AGG + Chr3:70536808-70536827 MsG0380015461.01.T01:intron 50.0%
! CTTACAGTACTGGAGGCTAC+GGG - Chr3:70536773-70536792 None:intergenic 50.0%
! CTTTAGCTGAGCTGGGTTGA+TGG - Chr3:70536850-70536869 None:intergenic 50.0%
! GGAGTCACTTACAGTACTGG+AGG - Chr3:70536780-70536799 None:intergenic 50.0%
! TCCACCCCTTTTATCGAGGA+TGG + Chr3:70536812-70536831 MsG0380015461.01.T01:intron 50.0%
! TGGGATTGATGGTTCAGCCT+GGG + Chr3:70536662-70536681 MsG0380015461.01.T01:intron 50.0%
!! ACCCAGAATGCTAGCTTTGC+TGG - Chr3:70535879-70535898 None:intergenic 50.0%
!! AGGATGTAGGGGAGTATTGG+AGG - Chr3:70536991-70537010 None:intergenic 50.0%
!! CTAGCTTTGCTGGAAGGCAA+TGG - Chr3:70535869-70535888 None:intergenic 50.0%
!! GCAAGGGAAGCACTTGCAAT+TGG - Chr3:70533223-70533242 None:intergenic 50.0%
!! TAAAAAGTTGGGTGCTGGGG+AGG + Chr3:70537520-70537539 MsG0380015461.01.T01:CDS 50.0%
!! TCCGGAAGGGAGTATTGAGA+GGG + Chr3:70532718-70532737 MsG0380015461.01.T01:CDS 50.0%
!! TTCCGGAAGGGAGTATTGAG+AGG + Chr3:70532717-70532736 MsG0380015461.01.T01:CDS 50.0%
ACGGTGGTTATATGGACGGG+AGG - Chr3:70536372-70536391 None:intergenic 55.0%
ACTGCCGCCAACATCGTGTT+TGG + Chr3:70532167-70532186 MsG0380015461.01.T01:CDS 55.0%
AGGGGTGGAGGATTCATGCA+AGG - Chr3:70536801-70536820 None:intergenic 55.0%
CAGGTCTCGAAGTCTTTGCG+CGG - Chr3:70532774-70532793 None:intergenic 55.0%
CGGCAGGTATCAAGACCAAC+AGG - Chr3:70536257-70536276 None:intergenic 55.0%
CGGTGGTTATATGGACGGGA+GGG - Chr3:70536371-70536390 None:intergenic 55.0%
CTCGAAGTCTTTGCGCGGAA+CGG - Chr3:70532769-70532788 None:intergenic 55.0%
GGCTACGGGTCAAAGGTCAA+AGG - Chr3:70536759-70536778 None:intergenic 55.0%
GGGAGATGCAAATGTGCCAC+AGG - Chr3:70534647-70534666 None:intergenic 55.0%
GGTGGTTATATGGACGGGAG+GGG - Chr3:70536370-70536389 None:intergenic 55.0%
GGTTGTGGAGAGCTTGAGTG+CGG - Chr3:70532117-70532136 None:intergenic 55.0%
TACTGGAGGCTACGGGTCAA+AGG - Chr3:70536766-70536785 None:intergenic 55.0%
TCCCTAGTCGAGTAGTGCCT+CGG - Chr3:70536277-70536296 None:intergenic 55.0%
TGGTTCAGCCTGGGTGGTAA+TGG + Chr3:70536671-70536690 MsG0380015461.01.T01:intron 55.0%
! GATTGATGGTTCAGCCTGGG+TGG + Chr3:70536665-70536684 MsG0380015461.01.T01:intron 55.0%
! GTGGGATTGATGGTTCAGCC+TGG + Chr3:70536661-70536680 MsG0380015461.01.T01:intron 55.0%
!! GTTGGTCTTGATACCTGCCG+AGG + Chr3:70536257-70536276 MsG0380015461.01.T01:intron 55.0%
!! TTCAGCCTGGGTGGTAATGG+CGG + Chr3:70536674-70536693 MsG0380015461.01.T01:intron 55.0%
AGAACCCGCCATTACCACCC+AGG - Chr3:70536682-70536701 None:intergenic 60.0%
ATGGCATCGTTATGGCGCGC+AGG + Chr3:70532011-70532030 MsG0380015461.01.T01:CDS 60.0%
CACGATGTTGGCGGCAGTGA+CGG - Chr3:70532165-70532184 None:intergenic 60.0%
CAGTGACGGCGTCGTTGAAG+AGG - Chr3:70532151-70532170 None:intergenic 60.0%
CTACTTGCAACCGCCATCGG+CGG + Chr3:70532047-70532066 MsG0380015461.01.T01:CDS 60.0%
GAAGTCTTTGCGCGGAACGG+AGG - Chr3:70532766-70532785 None:intergenic 60.0%
GAGAGCTTGAGTGCGGTTGC+GGG - Chr3:70532110-70532129 None:intergenic 60.0%
GGAGAGCTTGAGTGCGGTTG+CGG - Chr3:70532111-70532130 None:intergenic 60.0%
GGCTGCTGATCAAGCCACTG+TGG + Chr3:70533460-70533479 MsG0380015461.01.T01:CDS 60.0%
TAGTCGAGTAGTGCCTCGGC+AGG - Chr3:70536273-70536292 None:intergenic 60.0%
TGGCATCGTTATGGCGCGCA+GGG + Chr3:70532012-70532031 MsG0380015461.01.T01:CDS 60.0%
! GCCGAGGCACTACTCGACTA+GGG + Chr3:70536273-70536292 MsG0380015461.01.T01:intron 60.0%
! TGCCGAGGCACTACTCGACT+AGG + Chr3:70536272-70536291 MsG0380015461.01.T01:intron 60.0%
!! TCAGCCTGGGTGGTAATGGC+GGG + Chr3:70536675-70536694 MsG0380015461.01.T01:intron 60.0%
CGGCGTCGTTGAAGAGGCGA+CGG - Chr3:70532145-70532164 None:intergenic 65.0%
CGTCGTTGAAGAGGCGACGG+GGG - Chr3:70532142-70532161 None:intergenic 65.0%
GAGTGCGGTTGCGGGATCGT+CGG - Chr3:70532102-70532121 None:intergenic 65.0%
GCGTCGTTGAAGAGGCGACG+GGG - Chr3:70532143-70532162 None:intergenic 65.0%
GGCGTCGTTGAAGAGGCGAC+GGG - Chr3:70532144-70532163 None:intergenic 65.0%
GTTGAAGAGGCGACGGGGGA+TGG - Chr3:70532138-70532157 None:intergenic 65.0%
CTTGCAACCGCCATCGGCGG+CGG + Chr3:70532050-70532069 MsG0380015461.01.T01:CDS 70.0%
GAGGCGACGGGGGATGGTTG+TGG - Chr3:70532132-70532151 None:intergenic 70.0%
GGTTGCGGGATCGTCGGAGG+TGG - Chr3:70532096-70532115 None:intergenic 70.0%
TGCGGTTGCGGGATCGTCGG+AGG - Chr3:70532099-70532118 None:intergenic 70.0%
CATCGGCGGCGGCAGTGCAG+CGG + Chr3:70532061-70532080 MsG0380015461.01.T01:CDS 75.0%
TGCACTGCCGCCGCCGATGG+CGG - Chr3:70532060-70532079 None:intergenic 75.0%
! CGCTGCACTGCCGCCGCCGA+TGG - Chr3:70532063-70532082 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 70531979 70538914 70531979 ID=MsG0380015461.01;Name=MsG0380015461.01
Chr3 mRNA 70531979 70538914 70531979 ID=MsG0380015461.01.T01;Parent=MsG0380015461.01;Name=MsG0380015461.01.T01;_AED=0.36;_eAED=0.36;_QI=32|1|1|1|1|1|11|366|545
Chr3 exon 70531979 70532188 70531979 ID=MsG0380015461.01.T01:exon:411;Parent=MsG0380015461.01.T01
Chr3 exon 70532693 70532847 70532693 ID=MsG0380015461.01.T01:exon:412;Parent=MsG0380015461.01.T01
Chr3 exon 70532939 70533064 70532939 ID=MsG0380015461.01.T01:exon:413;Parent=MsG0380015461.01.T01
Chr3 exon 70533196 70533291 70533196 ID=MsG0380015461.01.T01:exon:414;Parent=MsG0380015461.01.T01
Chr3 exon 70533431 70533531 70533431 ID=MsG0380015461.01.T01:exon:415;Parent=MsG0380015461.01.T01
Chr3 exon 70533785 70533821 70533785 ID=MsG0380015461.01.T01:exon:416;Parent=MsG0380015461.01.T01
Chr3 exon 70535113 70535331 70535113 ID=MsG0380015461.01.T01:exon:417;Parent=MsG0380015461.01.T01
Chr3 exon 70535785 70535896 70535785 ID=MsG0380015461.01.T01:exon:418;Parent=MsG0380015461.01.T01
Chr3 exon 70537387 70537658 70537387 ID=MsG0380015461.01.T01:exon:419;Parent=MsG0380015461.01.T01
Chr3 exon 70538013 70538126 70538013 ID=MsG0380015461.01.T01:exon:420;Parent=MsG0380015461.01.T01
Chr3 exon 70538321 70538914 70538321 ID=MsG0380015461.01.T01:exon:421;Parent=MsG0380015461.01.T01
Chr3 five_prime_UTR 70531979 70532010 70531979 ID=MsG0380015461.01.T01:five_prime_utr;Parent=MsG0380015461.01.T01
Chr3 CDS 70532011 70532188 70532011 ID=MsG0380015461.01.T01:cds;Parent=MsG0380015461.01.T01
Chr3 CDS 70532693 70532847 70532693 ID=MsG0380015461.01.T01:cds;Parent=MsG0380015461.01.T01
Chr3 CDS 70532939 70533064 70532939 ID=MsG0380015461.01.T01:cds;Parent=MsG0380015461.01.T01
Chr3 CDS 70533196 70533291 70533196 ID=MsG0380015461.01.T01:cds;Parent=MsG0380015461.01.T01
Chr3 CDS 70533431 70533531 70533431 ID=MsG0380015461.01.T01:cds;Parent=MsG0380015461.01.T01
Chr3 CDS 70533785 70533821 70533785 ID=MsG0380015461.01.T01:cds;Parent=MsG0380015461.01.T01
Chr3 CDS 70535113 70535331 70535113 ID=MsG0380015461.01.T01:cds;Parent=MsG0380015461.01.T01
Chr3 CDS 70535785 70535896 70535785 ID=MsG0380015461.01.T01:cds;Parent=MsG0380015461.01.T01
Chr3 CDS 70537387 70537658 70537387 ID=MsG0380015461.01.T01:cds;Parent=MsG0380015461.01.T01
Chr3 CDS 70538013 70538126 70538013 ID=MsG0380015461.01.T01:cds;Parent=MsG0380015461.01.T01
Chr3 CDS 70538321 70538548 70538321 ID=MsG0380015461.01.T01:cds;Parent=MsG0380015461.01.T01
Chr3 three_prime_UTR 70538549 70538914 70538549 ID=MsG0380015461.01.T01:three_prime_utr;Parent=MsG0380015461.01.T01
Gene Sequence

>MsG0380015461.01.T01

ATGGCATCGTTATGGCGCGCAGGGACCAAGCTATCTCTACTTGCAACCGCCATCGGCGGCGGCAGTGCAGCGGCGCTCATTGCCACCTCCGACGATCCCGCAACCGCACTCAAGCTCTCCACAACCATCCCCCGTCGCCTCTTCAACGACGCCGTCACTGCCGCCAACATCGTGTTTGATTATGAATATTCACTACATGGAGTTCCGGAAGGGAGTATTGAGAGGGAAAAAGTTAAGCATGAAGTTCACCTCCGTTCCGCGCAAAGACTTCGAGACCTGTGTTTTAAGAATGGAGGGATTTATATAAAGCTTGGACAACATCTTGGGCAATTGGAATACTTAGTTCCTCAAGAGTATGTTCAGACCATGAGGGAGTCCATGCTAAATAGATGTCCGGTTTCATCGTATGAACAAATATGTGATGTATTCATGAAAGAGTTTGGAGCGACACCAGATAAAGTATTTGCCGAGTTCGATCCAGTTCCAATTGCAAGTGCTTCCCTTGCACAAGTTCATGTAGCTCGCACACATGATGGCCAACAAGTTGCTGTGAAGGTCCAACATTCTCACATGACTGAAACTGCGGCTGCTGATCAAGCCACTGTGGAGTTGATTGTGAACACTCTGCATAATTTTTTTCCCAGTTTCGATTATAGGTGGTTGATTGATGAGATTAAAGAGAGTTTGCCCCAGGAATTGGACTTTTTAACTGAGGCAAAGAACAGTGAGAGGTGTTTGGAGAACTTCCGCAACTTGTCTCCTCATATTGCAAAATATGTATATGCACCAAAAGTATACTGGGGTCTGAGTTCCTCAAAGTTGCTTACAATGGAATACGTAGATGGTGCTTATGTAAATGATGTGAAGACCATTAAGAAACTAGGGATCCGTCCACATGAACTTTCAATATTGGTTAGTCAAACTTTTGCTGAAATGATGTTCAAGCACGGGTTTGTACACTGCGATCCACATGCTGCTAATATGTTGGTTCGCCCATTGCCTTCCAGCAAAGCTAGCATTCTGGGCTGGAGAAAACCACAGCTGATTCTTTTAGACCATGGACTCTATAAAGAACTTGACTTCAATACAAGAAATAATTATGCTGCACTATGGAAGGCATTGATATTTGCTGATGCTAATGCAATCAAGGAATACAGTAAAAAGTTGGGTGCTGGGGAGGATTTATATGCAATTTTTGCCGGAGCTCTAACAATGAGACCTTGGAATAAAGTTGTCGACCCGTCCATGGATCATTTAGTTATACAGGGAAGTGAGAGTGACCGTTCAGAAATGCAGATGTACGCTTCTGAATATTTCCATGAAATCTCTGAGCTTCTAAGGAGATTACCTCGTGTGATTCTTCTAATGATGAAGACAAATGACTGTTTAAGAGCAGTTAATAATACCCTGACACAGGGATCACTACTGGAGACATCTCTGAAAACATCTTGTATCATTGGAAAGGTTTCTTCCGAGGCTGTCATTGACGCAAAAAGGTCACAAAGCAAGTCAGTTTTAACTTGGTTTAGCATTAAATGGGACAAGATTTTACTGGAAATACAACTTTGGAAAATGCAGATGTTCCTGTGGCTTTTACAAGTGAGAAAGGCATTGCCTTGGTCTCATCGAGCATCATAA
Protein sequence

>MsG0380015461.01.T01

MASLWRAGTKLSLLATAIGGGSAAALIATSDDPATALKLSTTIPRRLFNDAVTAANIVFDYEYSLHGVPEGSIEREKVKHEVHLRSAQRLRDLCFKNGGIYIKLGQHLGQLEYLVPQEYVQTMRESMLNRCPVSSYEQICDVFMKEFGATPDKVFAEFDPVPIASASLAQVHVARTHDGQQVAVKVQHSHMTETAAADQATVELIVNTLHNFFPSFDYRWLIDEIKESLPQELDFLTEAKNSERCLENFRNLSPHIAKYVYAPKVYWGLSSSKLLTMEYVDGAYVNDVKTIKKLGIRPHELSILVSQTFAEMMFKHGFVHCDPHAANMLVRPLPSSKASILGWRKPQLILLDHGLYKELDFNTRNNYAALWKALIFADANAIKEYSKKLGAGEDLYAIFAGALTMRPWNKVVDPSMDHLVIQGSESDRSEMQMYASEYFHEISELLRRLPRVILLMMKTNDCLRAVNNTLTQGSLLETSLKTSCIIGKVSSEAVIDAKRSQSKSVLTWFSIKWDKILLEIQLWKMQMFLWLLQVRKALPWSHRAS*