AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015618.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015618.01.T01 MTR_3g073420 97.311 595 14 1 14 608 1 593 0.0 1197
MsG0380015618.01.T01 MTR_5g061220 44.846 553 250 14 32 573 19 527 6.93e-146 432
MsG0380015618.01.T01 MTR_2g094570 43.182 572 289 14 17 569 52 606 2.00e-129 398
MsG0380015618.01.T01 MTR_2g094570 43.494 561 281 14 28 569 7 550 2.25e-129 395
MsG0380015618.01.T01 MTR_2g094570 43.494 561 281 14 28 569 7 550 3.36e-129 395
MsG0380015618.01.T01 MTR_5g040880 40.598 569 261 14 29 577 8 519 9.37e-128 386
MsG0380015618.01.T01 MTR_2g024430 40.642 561 267 12 22 572 10 514 1.77e-127 385
MsG0380015618.01.T01 MTR_4g058930 47.991 448 215 10 29 463 9 451 1.58e-124 382
MsG0380015618.01.T01 MTR_4g058930 47.991 448 215 10 29 463 9 451 3.87e-124 382
MsG0380015618.01.T01 MTR_7g101280 42.857 525 249 16 28 516 27 536 4.51e-124 380
MsG0380015618.01.T01 MTR_0041s0110 42.857 525 249 16 28 516 27 536 4.51e-124 380
MsG0380015618.01.T01 MTR_1g064430 41.426 589 288 18 29 588 24 584 1.21e-121 375
MsG0380015618.01.T01 MTR_1g064430 41.426 589 288 18 29 588 37 597 1.33e-121 376
MsG0380015618.01.T01 MTR_1g094960 43.340 473 200 13 29 463 16 458 7.14e-119 366
MsG0380015618.01.T01 MTR_1g058210 37.085 542 221 12 20 554 3 431 5.13e-107 330
MsG0380015618.01.T01 MTR_5g082140 39.696 461 220 9 23 475 3 413 1.38e-99 311
MsG0380015618.01.T01 MTR_2g006270 35.856 555 240 15 24 571 5 450 2.04e-98 308
MsG0380015618.01.T01 MTR_2g006380 34.838 554 230 19 29 571 17 450 3.07e-90 286
MsG0380015618.01.T01 MTR_5g040740 44.011 359 150 8 22 375 2 314 1.39e-89 283
MsG0380015618.01.T01 MTR_7g101275 43.314 344 151 7 42 380 2 306 1.55e-85 273
MsG0380015618.01.T01 MTR_0041s0120 42.045 352 156 7 42 380 2 318 1.66e-82 265
MsG0380015618.01.T01 MTR_5g060630 33.099 568 249 19 29 523 9 518 8.82e-75 248
MsG0380015618.01.T01 MTR_5g460740 33.099 568 249 19 29 523 9 518 8.82e-75 248
MsG0380015618.01.T01 MTR_5g060780 35.897 390 182 11 29 406 9 342 1.60e-69 231
MsG0380015618.01.T01 MTR_5g061890 36.579 380 177 10 29 396 9 336 1.12e-68 228
MsG0380015618.01.T01 MTR_5g460920 35.897 390 182 11 29 406 9 342 1.38e-68 228
MsG0380015618.01.T01 MTR_8g079492 37.778 405 199 8 20 412 11 374 1.39e-68 239
MsG0380015618.01.T01 MTR_8g079492 37.778 405 199 8 20 412 11 374 1.40e-68 239
MsG0380015618.01.T01 MTR_2g005240 37.755 392 201 8 29 414 20 374 1.93e-68 235
MsG0380015618.01.T01 MTR_2g014770 34.804 408 216 5 18 414 39 407 4.63e-68 233
MsG0380015618.01.T01 MTR_2g014770 34.804 408 216 5 18 414 39 407 9.60e-68 233
MsG0380015618.01.T01 MTR_2g018690 37.656 401 206 7 20 412 11 375 2.01e-67 236
MsG0380015618.01.T01 MTR_4g021580 36.387 393 201 8 30 414 17 368 1.13e-65 226
MsG0380015618.01.T01 MTR_4g021580 36.387 393 201 8 30 414 17 368 1.24e-65 227
MsG0380015618.01.T01 MTR_3g064050 36.990 392 203 7 29 412 23 378 8.65e-65 228
MsG0380015618.01.T01 MTR_8g100050 34.491 432 219 9 32 440 59 449 1.57e-64 225
MsG0380015618.01.T01 MTR_1g024025 38.832 394 185 11 28 410 39 387 3.62e-64 229
MsG0380015618.01.T01 MTR_5g076270 36.735 392 204 7 29 412 21 376 5.08e-64 226
MsG0380015618.01.T01 MTR_8g100050 34.491 432 219 9 32 440 59 449 6.30e-64 225
MsG0380015618.01.T01 MTR_2g093740 36.641 393 193 9 32 410 56 406 1.33e-63 222
MsG0380015618.01.T01 MTR_2g093740 36.641 393 193 9 32 410 56 406 7.77e-63 221
MsG0380015618.01.T01 MTR_2g093740 36.641 393 193 9 32 410 56 406 9.16e-63 222
MsG0380015618.01.T01 MTR_4g088210 35.750 400 199 9 32 414 38 396 1.65e-62 219
MsG0380015618.01.T01 MTR_4g088210 35.750 400 199 9 32 414 38 396 2.52e-62 219
MsG0380015618.01.T01 MTR_7g062540 34.910 444 237 15 29 460 11 414 6.94e-62 217
MsG0380015618.01.T01 MTR_4g124900 35.627 407 209 9 28 423 19 383 1.18e-60 219
MsG0380015618.01.T01 MTR_4g124900 35.627 407 209 9 28 423 19 383 1.32e-60 218
MsG0380015618.01.T01 MTR_2g093740 35.468 406 193 10 32 410 56 419 6.89e-60 212
MsG0380015618.01.T01 MTR_2g093740 35.468 406 193 10 32 410 56 419 2.47e-59 212
MsG0380015618.01.T01 MTR_2g093740 35.468 406 193 10 32 410 56 419 3.07e-59 212
MsG0380015618.01.T01 MTR_4g060460 33.920 398 213 7 32 414 54 416 1.41e-57 207
MsG0380015618.01.T01 MTR_4g060460 33.920 398 213 7 32 414 54 416 1.53e-57 207
MsG0380015618.01.T01 MTR_8g027440 35.459 392 207 9 29 414 26 377 2.65e-57 204
MsG0380015618.01.T01 MTR_8g079492 38.957 326 160 6 90 412 3 292 1.04e-55 202
MsG0380015618.01.T01 MTR_5g062970 48.515 202 96 4 24 220 30 228 4.62e-54 184
MsG0380015618.01.T01 MTR_2g043250 45.161 217 106 3 29 236 20 232 9.20e-54 198
MsG0380015618.01.T01 MTR_8g101360 45.370 216 112 4 24 233 23 238 1.69e-50 189
MsG0380015618.01.T01 MTR_8g101360 40.625 96 55 2 301 395 271 365 6.46e-11 66.2
MsG0380015618.01.T01 MTR_2g093740 38.078 281 132 5 130 410 38 276 7.49e-48 177
MsG0380015618.01.T01 MTR_2g093740 38.078 281 132 5 130 410 38 276 1.37e-47 177
MsG0380015618.01.T01 MTR_2g093740 35.764 288 137 4 130 404 38 290 2.67e-44 167
MsG0380015618.01.T01 MTR_2g093740 36.395 294 132 6 130 410 38 289 3.14e-44 168
MsG0380015618.01.T01 MTR_8g446900 29.231 325 182 8 79 399 12 292 2.19e-37 143
MsG0380015618.01.T01 MTR_5g062960 39.512 205 85 6 290 484 2 177 9.27e-35 130
MsG0380015618.01.T01 MTR_5g060770 34.361 227 96 10 261 466 120 314 5.75e-20 92.4
MsG0380015618.01.T01 MTR_5g060770 39.726 146 76 4 81 224 9 144 4.07e-19 89.7
MsG0380015618.01.T01 MTR_5g046120 41.379 116 57 5 69 177 11 122 5.67e-14 69.7
MsG0380015618.01.T01 MTR_1g058350 36.752 117 68 4 118 230 65 179 4.63e-12 67.8
MsG0380015618.01.T01 MTR_5g460910 31.034 203 82 9 283 466 146 309 5.34e-12 67.8
MsG0380015618.01.T01 MTR_4g128490 70.213 47 13 1 200 245 5 51 6.36e-12 62.0
MsG0380015618.01.T01 MTR_8g023990 36.364 110 65 2 125 230 167 275 2.75e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015618.01.T01 AT1G77850 47.950 561 269 11 25 575 12 559 4.08e-164 482
MsG0380015618.01.T01 AT1G77850 47.950 561 269 11 25 575 12 559 4.18e-164 481
MsG0380015618.01.T01 AT4G30080 42.376 564 284 14 29 574 16 556 1.17e-121 375
MsG0380015618.01.T01 AT2G28350 46.389 457 209 10 28 460 6 450 1.03e-119 370
MsG0380015618.01.T01 AT2G28350 46.389 457 209 10 28 460 6 450 1.99e-119 370
MsG0380015618.01.T01 AT5G37020 37.101 407 211 8 29 426 19 389 1.04e-69 240
MsG0380015618.01.T01 AT5G37020 37.101 407 211 8 29 426 19 389 2.86e-69 240
MsG0380015618.01.T01 AT1G30330 38.366 404 201 8 21 412 10 377 1.10e-68 240
MsG0380015618.01.T01 AT1G30330 38.366 404 201 8 21 412 10 377 1.10e-68 240
MsG0380015618.01.T01 AT1G30330 38.250 400 203 7 21 412 12 375 1.47e-68 240
MsG0380015618.01.T01 AT2G33860 33.983 462 244 8 32 473 54 474 1.70e-68 234
MsG0380015618.01.T01 AT1G59750 37.692 390 198 10 32 414 22 373 6.34e-66 228
MsG0380015618.01.T01 AT1G59750 37.692 390 198 10 32 414 22 373 7.75e-66 228
MsG0380015618.01.T01 AT1G59750 37.692 390 198 10 32 414 22 373 7.77e-66 228
MsG0380015618.01.T01 AT1G59750 37.692 390 198 10 32 414 22 373 7.77e-66 228
MsG0380015618.01.T01 AT2G46530 35.714 406 208 9 25 419 14 377 2.94e-63 219
MsG0380015618.01.T01 AT4G23980 36.702 376 187 10 29 395 9 342 5.28e-63 219
MsG0380015618.01.T01 AT4G23980 36.702 376 187 10 29 395 9 342 7.35e-63 219
MsG0380015618.01.T01 AT2G46530 35.309 405 211 8 25 419 35 398 9.24e-63 218
MsG0380015618.01.T01 AT5G60450 34.670 424 222 9 25 432 34 418 3.23e-62 220
MsG0380015618.01.T01 AT5G60450 35.012 417 216 9 32 432 65 442 2.55e-61 218
MsG0380015618.01.T01 AT1G19850 37.468 395 188 12 29 410 40 388 3.09e-61 219
MsG0380015618.01.T01 AT1G19850 37.468 395 188 12 29 410 51 399 3.61e-61 219
MsG0380015618.01.T01 AT3G61830 34.726 383 206 6 29 406 22 365 1.62e-60 212
MsG0380015618.01.T01 AT5G62000 33.487 433 222 10 32 440 61 451 8.23e-60 214
MsG0380015618.01.T01 AT5G62000 33.487 433 222 10 32 440 61 451 8.29e-60 214
MsG0380015618.01.T01 AT5G62000 33.487 433 222 10 32 440 61 451 8.29e-60 214
MsG0380015618.01.T01 AT5G62000 33.487 433 222 10 32 440 61 451 8.29e-60 214
MsG0380015618.01.T01 AT5G62000 33.487 433 222 10 32 440 61 451 8.29e-60 214
MsG0380015618.01.T01 AT1G35520 31.481 486 257 15 24 478 19 459 1.10e-56 201
MsG0380015618.01.T01 AT1G34410 32.083 480 246 18 32 478 27 459 1.27e-55 199
MsG0380015618.01.T01 AT1G34310 34.761 397 204 11 32 419 27 377 3.56e-55 197
MsG0380015618.01.T01 AT1G35240 34.596 396 202 12 32 417 27 375 9.02e-55 196
MsG0380015618.01.T01 AT1G19220 45.161 217 106 3 29 236 20 232 4.89e-54 199
MsG0380015618.01.T01 AT5G20730 45.161 217 106 3 29 236 21 233 3.70e-53 197
MsG0380015618.01.T01 AT5G20730 45.161 217 106 3 29 236 21 233 4.06e-53 196
MsG0380015618.01.T01 AT5G20730 45.161 217 106 3 29 236 21 233 4.55e-53 196
MsG0380015618.01.T01 AT1G34390 33.753 397 206 12 32 419 27 375 2.35e-52 189
MsG0380015618.01.T01 AT2G33860 35.028 354 182 6 130 473 2 317 9.59e-52 184
MsG0380015618.01.T01 AT1G35540 33.165 395 213 11 32 419 27 377 2.90e-51 187
MsG0380015618.01.T01 AT5G37020 38.000 300 147 6 130 426 31 294 6.27e-51 187
MsG0380015618.01.T01 AT3G61830 34.545 330 177 5 77 406 24 314 1.13e-48 178
MsG0380015618.01.T01 AT1G34170 30.548 383 206 11 27 397 20 354 6.06e-45 167
MsG0380015618.01.T01 AT2G46530 35.786 299 144 8 127 419 34 290 1.60e-42 160
MsG0380015618.01.T01 AT1G34170 28.982 383 186 11 27 397 20 328 8.68e-39 149
MsG0380015618.01.T01 AT1G34170 28.982 383 186 11 27 397 20 328 3.50e-38 149
MsG0380015618.01.T01 AT1G43950 38.725 204 111 7 32 229 27 222 1.13e-34 131
MsG0380015618.01.T01 AT3G61970 34.454 119 73 3 117 230 9 127 1.55e-12 69.3
MsG0380015618.01.T01 AT2G36080 37.273 110 65 2 125 230 33 142 2.71e-12 67.4
MsG0380015618.01.T01 AT2G36080 37.273 110 65 2 125 230 33 142 3.46e-12 65.5
MsG0380015618.01.T01 AT2G36080 37.273 110 65 2 125 230 33 142 3.46e-12 65.5
MsG0380015618.01.T01 AT2G36080 37.273 110 65 2 125 230 33 142 3.52e-12 67.4
MsG0380015618.01.T01 AT2G46870 33.071 127 79 2 124 245 29 154 2.04e-11 65.9
MsG0380015618.01.T01 AT4G01500 38.542 96 50 2 126 218 32 121 2.59e-11 65.9
MsG0380015618.01.T01 AT1G01030 33.613 119 73 2 116 229 42 159 2.68e-11 65.9
MsG0380015618.01.T01 AT1G01030 33.613 119 73 2 116 229 42 159 2.98e-11 65.9
MsG0380015618.01.T01 AT3G25730 34.314 102 63 2 130 227 183 284 8.77e-11 64.3

Find 222 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTGTTCAGAACTTTAT+TGG 0.164550 3:+72600904 MsG0380015618.01.T01:three_prime_UTR
CCTGTAACGTTTCAGCTATT+TGG 0.208521 3:+72600121 MsG0380015618.01.T01:CDS
TTGACATAAAGTAGAGAAAA+AGG 0.211523 3:+72600708 MsG0380015618.01.T01:three_prime_UTR
CCTCAACTGTAGAGGCTATT+TGG 0.235780 3:-72600303 None:intergenic
CTAACCAACCATTGTACTTT+AGG 0.240097 3:-72601282 None:intergenic
GAAACTAAGTATGTAATATT+TGG 0.249464 3:+72601218 MsG0380015618.01.T01:three_prime_UTR
TGATATATGATGCCTGTTTC+TGG 0.256836 3:+72600643 MsG0380015618.01.T01:three_prime_UTR
GTCTAATACAAGAAAATAAA+TGG 0.280528 3:+72600872 MsG0380015618.01.T01:three_prime_UTR
TCATTGTTCAGAACTTTATT+GGG 0.286084 3:+72600905 MsG0380015618.01.T01:three_prime_UTR
CTGTTCCTGATCGTGGGGCT+TGG 0.289614 3:+72598624 MsG0380015618.01.T01:CDS
GCGATAGCTCGCCAGAGTTT+GGG 0.291734 3:-72597642 None:intergenic
AAAAGGACTAGAGGGGTATC+TGG 0.298766 3:+72599743 MsG0380015618.01.T01:CDS
GGCGATAGCTCGCCAGAGTT+TGG 0.304479 3:-72597643 None:intergenic
AAATCCCCTCCGTCAATTCT+AGG 0.308448 3:+72597679 MsG0380015618.01.T01:CDS
TCCTCCGTTGGATTATAGTA+TGG 0.314074 3:+72598019 MsG0380015618.01.T01:CDS
AGTGAATCAAAGTTCTCAAT+AGG 0.324067 3:+72600394 MsG0380015618.01.T01:three_prime_UTR
TCCGGTGGCGGTTGCGGAGG+CGG 0.344489 3:+72598403 MsG0380015618.01.T01:CDS
CAGAGTAGTTTGCCTTCCTT+TGG 0.347823 3:+72600052 MsG0380015618.01.T01:CDS
TTTGTTTGTCTTATTGAAAC+CGG 0.362279 3:+72601188 MsG0380015618.01.T01:three_prime_UTR
TGATAACTTCCGTCTTTGTA+TGG 0.363524 3:+72599931 MsG0380015618.01.T01:CDS
TTGGAAGTTTGCAACACTTC+AGG 0.367022 3:-72599650 None:intergenic
TCCAGGACTACTTGGTTTCA+AGG 0.368052 3:+72598584 MsG0380015618.01.T01:CDS
GGCGGCGGAAATGGCAGCAC+AGG 0.371956 3:+72598421 MsG0380015618.01.T01:CDS
GGTTGCGGAGGCGGCGGAAA+TGG 0.372996 3:+72598412 MsG0380015618.01.T01:CDS
TGGAGACTGATGATTCTTCC+AGG 0.375310 3:+72598567 MsG0380015618.01.T01:CDS
CCAAATAGCTGAAACGTTAC+AGG 0.375667 3:-72600121 None:intergenic
CTGCTGGCATGCAGGGAGCC+AGG 0.375982 3:+72599867 MsG0380015618.01.T01:CDS
ATACTTAGTTTCATTGTTCC+CGG 0.381218 3:-72601207 None:intergenic
TTGGAGACGGTGGTAGTACT+TGG 0.385584 3:-72597599 None:intergenic
TTTGGCAGCAACACAGTGCC+GGG 0.386977 3:+72599962 MsG0380015618.01.T01:CDS
CTTTGTATGGGTAACTCCTT+TGG 0.387691 3:+72599944 MsG0380015618.01.T01:CDS
TTGTTGATTACTGATGTTCA+TGG 0.389456 3:+72598059 MsG0380015618.01.T01:CDS
GTTTCAAGGTGTAGTATCTC+AGG 0.397036 3:+72598598 MsG0380015618.01.T01:CDS
ATGAGTATTCTCATGTGAAT+AGG 0.405531 3:+72600830 MsG0380015618.01.T01:three_prime_UTR
CTGGCTCCCTGCATGCCAGC+AGG 0.411242 3:-72599866 None:intergenic
AGGTTTCTGTTCCTGATCGT+GGG 0.413423 3:+72598618 MsG0380015618.01.T01:CDS
GTGAACCCTGTGATAGAAAA+GGG 0.417152 3:-72599791 None:intergenic
CGCCGGCATTTGTTGACCAC+CGG 0.418386 3:+72598122 MsG0380015618.01.T01:CDS
AAATTGCTCGACAGGCTTGA+TGG 0.418640 3:+72600274 MsG0380015618.01.T01:CDS
TAGCTGTCTTATTGGAATGT+TGG 0.422487 3:+72600504 MsG0380015618.01.T01:three_prime_UTR
AGCTGAAACGTTACAGGCCC+GGG 0.423670 3:-72600115 None:intergenic
ATGATTCTTCCAGGACTACT+TGG 0.424084 3:+72598576 MsG0380015618.01.T01:CDS
AGAAGAGGTGAGAGATTGTT+CGG 0.425048 3:-72597747 None:intergenic
GTTGTCTCCGGTGGCGGTTG+CGG 0.431234 3:+72598397 MsG0380015618.01.T01:CDS
CTGCCAAGGGCTGACCCACT+TGG 0.431622 3:-72599669 None:intergenic
AGTAGTTTGTGTTAGCTCAA+TGG 0.433219 3:+72600475 MsG0380015618.01.T01:three_prime_UTR
CAAGTGGGTCAGCCCTTGGC+AGG 0.434174 3:+72599670 MsG0380015618.01.T01:CDS
CAGGTTTCTGTTCCTGATCG+TGG 0.441155 3:+72598617 MsG0380015618.01.T01:CDS
GGCAAACTACTCTGGCTCTC+TGG 0.444672 3:-72600043 None:intergenic
AGTACTTGGCGGTTCATGAT+TGG 0.452130 3:-72597585 None:intergenic
AAATGGCAGCACAGGGGATG+GGG 0.452139 3:+72598429 MsG0380015618.01.T01:CDS
AACGCTAAGAAGCTTGTTGC+TGG 0.453003 3:+72598161 MsG0380015618.01.T01:CDS
AGTGAACCCTGTGATAGAAA+AGG 0.454541 3:-72599792 None:intergenic
ATTAATTGATAACATAGGTC+TGG 0.454554 3:+72600594 MsG0380015618.01.T01:three_prime_UTR
GCCGCCTCCGCAACCGCCAC+CGG 0.456465 3:-72598404 None:intergenic
GGGGAAGTTGTCTCCGGTGG+CGG 0.456900 3:+72598391 MsG0380015618.01.T01:CDS
GTGAATCAAAGTTCTCAATA+GGG 0.457230 3:+72600395 MsG0380015618.01.T01:three_prime_UTR
GGTGGCGGTTGCGGAGGCGG+CGG 0.459780 3:+72598406 MsG0380015618.01.T01:CDS
GAAATGGCAGCACAGGGGAT+GGG 0.460169 3:+72598428 MsG0380015618.01.T01:CDS
GGAAATGGCAGCACAGGGGA+TGG 0.461216 3:+72598427 MsG0380015618.01.T01:CDS
CAAAGGAAGGCAAACTACTC+TGG 0.464413 3:-72600051 None:intergenic
TCCTGGAATGAGAATCAAAA+TGG 0.464829 3:+72598541 MsG0380015618.01.T01:CDS
GGGGATTTGCACGGCAGCGC+CGG 0.466220 3:-72597664 None:intergenic
GGTGGATGAAGAAGAGAAGC+TGG 0.468766 3:+72598337 MsG0380015618.01.T01:CDS
AAAGGACTAGAGGGGTATCT+GGG 0.471476 3:+72599744 MsG0380015618.01.T01:CDS
CGATCTGTGGAGTGAGAAGT+AGG 0.471915 3:+72598315 MsG0380015618.01.T01:CDS
CCTCTCCAAGCCCCACGATC+AGG 0.472164 3:-72598629 None:intergenic
CACAGGAGATGACAGCAGTA+AGG 0.472700 3:+72600198 MsG0380015618.01.T01:CDS
ACCATTTGAACCACTTTCAA+CGG 0.473718 3:-72600167 None:intergenic
ATCGGAGCAAACACCGCCAC+CGG 0.479208 3:-72598273 None:intergenic
CCATTTGAACCACTTTCAAC+GGG 0.480213 3:-72600166 None:intergenic
CTGATGTTCATGGTTTGACT+TGG 0.481505 3:+72598069 MsG0380015618.01.T01:CDS
CTTTGGCAGCAACACAGTGC+CGG 0.482301 3:+72599961 MsG0380015618.01.T01:CDS
CCACCGGCGCTACTCCGATT+CGG 0.482322 3:-72598257 None:intergenic
CCCGTTGAAAGTGGTTCAAA+TGG 0.482554 3:+72600166 MsG0380015618.01.T01:CDS
CTTACTCAAAATTGCTCGAC+AGG 0.482573 3:+72600266 MsG0380015618.01.T01:CDS
ATTGTTTCTGATAGATTACA+TGG 0.486179 3:+72599621 MsG0380015618.01.T01:intron
AATCCCCTCCGTCAATTCTA+GGG 0.486899 3:+72597680 MsG0380015618.01.T01:CDS
CGGGAAGGGGAAGTTGTCTC+CGG 0.490275 3:+72598385 MsG0380015618.01.T01:CDS
ACCTTGAAACCAAGTAGTCC+TGG 0.491621 3:-72598585 None:intergenic
GAGGAAATGAACGGCGGAGA+CGG 0.491674 3:-72597796 None:intergenic
GAAGTTATCACCTGGAAAGT+TGG 0.498091 3:-72599918 None:intergenic
TCTCATGGCATGAAGTTCAA+TGG 0.498753 3:+72600947 MsG0380015618.01.T01:three_prime_UTR
AGAGAAGCTGGTGGATGAGA+AGG 0.506899 3:+72598349 MsG0380015618.01.T01:CDS
CTTCCAAGTGGGTCAGCCCT+TGG 0.507741 3:+72599666 MsG0380015618.01.T01:CDS
GGGTTCACTAATTCAACAAT+GGG 0.507819 3:+72599806 MsG0380015618.01.T01:CDS
ATGCACATAAGTAGCTGTAC+AGG 0.510612 3:+72600357 MsG0380015618.01.T01:three_prime_UTR
CTTGGTCCATGTGACCTTGA+GGG 0.511485 3:-72597713 None:intergenic
AATCGGAGTAGCGCCGGTGG+CGG 0.511889 3:+72598260 MsG0380015618.01.T01:CDS
ATTTCCTAAAGTACAATGGT+TGG 0.511906 3:+72601278 MsG0380015618.01.T01:three_prime_UTR
ACAGGAGATGACAGCAGTAA+GGG 0.514015 3:+72600199 MsG0380015618.01.T01:CDS
ATGAGTGTTACTTGGTGTCC+TGG 0.519012 3:+72598524 MsG0380015618.01.T01:CDS
GAGACGGTGGTAGTACTTGG+CGG 0.520685 3:-72597596 None:intergenic
CTGTTCGATTAGTTCCGAAT+CGG 0.520734 3:+72598243 MsG0380015618.01.T01:CDS
TAGCTGAAACGTTACAGGCC+CGG 0.521167 3:-72600116 None:intergenic
TAGGGACGAGAGAGAAGAAG+AGG 0.523309 3:-72597762 None:intergenic
TGTGCATATATTCTCACAAG+TGG 0.524922 3:+72600571 MsG0380015618.01.T01:three_prime_UTR
GAAAGAAGTTCCACCTGCCA+AGG 0.525099 3:-72599683 None:intergenic
GTGGGTCAGCCCTTGGCAGG+TGG 0.528173 3:+72599673 MsG0380015618.01.T01:CDS
GCGGCGGAAATGGCAGCACA+GGG 0.528509 3:+72598422 MsG0380015618.01.T01:CDS
GTGGTGTATTATCCGAGAGC+GGG 0.529625 3:+72598458 MsG0380015618.01.T01:CDS
TCTGATGCGAACAACGGTGG+TGG 0.529876 3:+72597960 MsG0380015618.01.T01:CDS
GTCTCCGGTGGCGGTTGCGG+AGG 0.531959 3:+72598400 MsG0380015618.01.T01:CDS
CTACTTCCCTCAAGGTCACA+TGG 0.532844 3:+72597707 MsG0380015618.01.T01:CDS
GGTTTGTTCTAATCAAGTGA+TGG 0.533356 3:+72600537 MsG0380015618.01.T01:three_prime_UTR
AACCGGTGGTCAACAAATGC+CGG 0.533689 3:-72598124 None:intergenic
AACTGCAACTCAATGAAACC+CGG 0.535247 3:+72600097 MsG0380015618.01.T01:CDS
ACAGAACAGCCCGTTGAAAG+TGG 0.538177 3:+72600157 MsG0380015618.01.T01:CDS
AACGGAAAATAGATCATGCC+TGG 0.538278 3:-72599885 None:intergenic
GAGACGGAGCAGAGAATGTA+GGG 0.539234 3:-72597780 None:intergenic
GATAACTTCCGTCTTTGTAT+GGG 0.539535 3:+72599932 MsG0380015618.01.T01:CDS
GTAGTAAACCCTAGAATTGA+CGG 0.541390 3:-72597688 None:intergenic
GAAAGCGGAGGTTGTGGATG+CGG 0.543290 3:+72598499 MsG0380015618.01.T01:CDS
CCCCATTGAAAAGGACTAGA+GGG 0.543634 3:+72599735 MsG0380015618.01.T01:CDS
TGTTGACCACCGGTTGGAGT+AGG 0.544509 3:+72598132 MsG0380015618.01.T01:CDS
ATAAGGACACTCACTACAGA+TGG 0.545289 3:-72600998 None:intergenic
TGATGTTCATGGTTTGACTT+GGG 0.545373 3:+72598070 MsG0380015618.01.T01:CDS
AAACTCTGGCGAGCTATCGC+CGG 0.546085 3:+72597645 MsG0380015618.01.T01:CDS
AAATCCGACCACCCCGCTCT+CGG 0.548356 3:-72598470 None:intergenic
TTATCCGAGAGCGGGGTGGT+CGG 0.550098 3:+72598466 MsG0380015618.01.T01:CDS
ATGCGGCGATGAGTGTTACT+TGG 0.550397 3:+72598516 MsG0380015618.01.T01:CDS
CCACACTCAACCCCAAACTC+TGG 0.551845 3:+72597631 MsG0380015618.01.T01:CDS
TGTTCGGAAGTGAAGTAGCT+TGG 0.552094 3:-72597731 None:intergenic
CTGTAGAGGCTATTTGGCAC+TGG 0.552669 3:-72600297 None:intergenic
GGAGACGGAGCAGAGAATGT+AGG 0.553295 3:-72597781 None:intergenic
GTTCACAAACCTACTCCAAC+CGG 0.553748 3:-72598141 None:intergenic
AGGGTTTACTACTTCCCTCA+AGG 0.555346 3:+72597699 MsG0380015618.01.T01:CDS
CGGCACTGTGTTGCTGCCAA+AGG 0.556216 3:-72599960 None:intergenic
GGCATTTGTTGACCACCGGT+TGG 0.557182 3:+72598126 MsG0380015618.01.T01:CDS
GTTTGTTCTAATCAAGTGAT+GGG 0.559977 3:+72600538 MsG0380015618.01.T01:three_prime_UTR
TTGTTTGTCTTATTGAAACC+GGG 0.560405 3:+72601189 MsG0380015618.01.T01:three_prime_UTR
CCGTCGTCAGCTTCAATCAC+CGG 0.562074 3:-72597900 None:intergenic
TGTGTTGAAAGCGGAGGTTG+TGG 0.562873 3:+72598493 MsG0380015618.01.T01:CDS
AAAAGATGGTCCTGTCTGCA+TGG 0.562967 3:-72601142 None:intergenic
ATCAACAAATTCTGCAACGG+AGG 0.565435 3:-72598044 None:intergenic
CAAAGACGGAAGTTATCACC+TGG 0.565893 3:-72599926 None:intergenic
CCTGATCGTGGGGCTTGGAG+AGG 0.567198 3:+72598629 MsG0380015618.01.T01:CDS
AATGCCGGCGCGGCGTTCCA+CGG 0.569609 3:-72598109 None:intergenic
AGGCATTAACAACCCTCTTG+AGG 0.570796 3:+72600237 MsG0380015618.01.T01:CDS
TTTACCGTGGAACGCCGCGC+CGG 0.571717 3:+72598105 MsG0380015618.01.T01:CDS
AGATTGTGTCTTCCGATCTG+TGG 0.572758 3:+72598302 MsG0380015618.01.T01:CDS
ACTAGAGGTGCAATGTTCAT+CGG 0.573435 3:+72598209 MsG0380015618.01.T01:CDS
GGGCTTGGAGAGGTTCACCT+TGG 0.573691 3:+72598639 MsG0380015618.01.T01:CDS
ACAAAATCTGTGCCAAAGGA+AGG 0.573965 3:-72600064 None:intergenic
GGAAAGGGCGTATGAAGGGA+AGG 0.577013 3:-72599713 None:intergenic
ACAGGGGATGGGGTTTGAAG+TGG 0.577463 3:+72598439 MsG0380015618.01.T01:CDS
TCATGACCATATAAAACTCA+AGG 0.578101 3:-72600623 None:intergenic
TAATATTTCCTAAAGTACAA+TGG 0.578597 3:+72601274 MsG0380015618.01.T01:three_prime_UTR
CCACCGTTGTTCGCATCAGA+AGG 0.582707 3:-72597957 None:intergenic
ATAAGAAGTAACGGAATCGA+AGG 0.582751 3:-72597531 None:intergenic
GTTCCGAATCGGAGTAGCGC+CGG 0.582911 3:+72598254 MsG0380015618.01.T01:CDS
CCAGAGTTTGGGGTTGAGTG+TGG 0.583941 3:-72597631 None:intergenic
TCAAATGGTACTGTTAGCAC+AGG 0.585129 3:+72600181 MsG0380015618.01.T01:CDS
AACGTTGGCAGTTCTCACTC+TGG 0.586514 3:+72600010 MsG0380015618.01.T01:CDS
GCTTGGTCCATGTGACCTTG+AGG 0.587306 3:-72597714 None:intergenic
TTGAAGCTGACGACGGTGAG+AGG 0.587325 3:+72597907 MsG0380015618.01.T01:CDS
CGATAGCTCGCCAGAGTTTG+GGG 0.589326 3:-72597641 None:intergenic
GTATCTGGGGTGTTAACTGA+TGG 0.592887 3:+72599758 MsG0380015618.01.T01:CDS
AGGTACTTCTCCATGCAGAC+AGG 0.594085 3:+72601132 MsG0380015618.01.T01:intron
GCTTCAATCACCGGAATCCG+TGG 0.594157 3:-72597891 None:intergenic
AGTGGATTAATTGATAACAT+AGG 0.597341 3:+72600589 MsG0380015618.01.T01:three_prime_UTR
CCGAACAAAATCTGTGCCAA+AGG 0.598966 3:-72600068 None:intergenic
AAGCTTAGCGAAAACCTCAT+CGG 0.601270 3:-72597832 None:intergenic
CCGAATCGGAGTAGCGCCGG+TGG 0.601878 3:+72598257 MsG0380015618.01.T01:CDS
AAAGTAAATGAAAATGCAGA+GGG 0.606963 3:+72600754 MsG0380015618.01.T01:three_prime_UTR
AATGAGAATCAAAATGGCTG+TGG 0.607672 3:+72598547 MsG0380015618.01.T01:CDS
GGTTTCTGTTCCTGATCGTG+GGG 0.610340 3:+72598619 MsG0380015618.01.T01:CDS
GGTTGAATGAAAATGAGTGA+GGG 0.612055 3:-72597564 None:intergenic
AGGGTTCACTAATTCAACAA+TGG 0.612370 3:+72599805 MsG0380015618.01.T01:CDS
ATCGAATCAGCACAAAACCT+CGG 0.612548 3:-72597993 None:intergenic
GTAATCAACAAATTCTGCAA+CGG 0.612614 3:-72598047 None:intergenic
CCAAATAGCCTCTACAGTTG+AGG 0.612889 3:+72600303 MsG0380015618.01.T01:CDS
GAGTAAGTCGAATCCTCAAG+AGG 0.613064 3:-72600250 None:intergenic
CATACTGCAAGGTCAAAAGA+TGG 0.615276 3:-72601156 None:intergenic
AAAAGTAAATGAAAATGCAG+AGG 0.617273 3:+72600753 MsG0380015618.01.T01:three_prime_UTR
AAGGACTAGAGGGGTATCTG+GGG 0.618552 3:+72599745 MsG0380015618.01.T01:CDS
CTACTTCTCACTCCACAGAT+CGG 0.620895 3:-72598314 None:intergenic
CATTGTTCAGAACTTTATTG+GGG 0.623018 3:+72600906 MsG0380015618.01.T01:three_prime_UTR
ACTGCAACTCAATGAAACCC+GGG 0.624047 3:+72600098 MsG0380015618.01.T01:CDS
CGGATCGGCGAGGAAATGAA+CGG 0.627023 3:-72597805 None:intergenic
TTGGCAGCAACACAGTGCCG+GGG 0.627502 3:+72599963 MsG0380015618.01.T01:CDS
ATAGCATGCCTCAACTGTAG+AGG 0.636006 3:-72600311 None:intergenic
TTAACAGTGAAATCATTCAA+CGG 0.636083 3:-72597864 None:intergenic
ATTGACGGAGGGGATTTGCA+CGG 0.638032 3:-72597673 None:intergenic
AAGGGCTGCAACGAAACTGA+AGG 0.639246 3:+72600217 MsG0380015618.01.T01:CDS
GGATGAAGAAGAGAAGCTGG+TGG 0.642912 3:+72598340 MsG0380015618.01.T01:CDS
AGTAAGTCGAATCCTCAAGA+GGG 0.645578 3:-72600249 None:intergenic
TAAGGACACTCACTACAGAT+GGG 0.646474 3:-72600997 None:intergenic
AGGAGTTACCCATACAAAGA+CGG 0.649086 3:-72599940 None:intergenic
TGGTTGAATGAAAATGAGTG+AGG 0.649701 3:-72597565 None:intergenic
AAAGTACTGTAACTCAACAA+TGG 0.650302 3:-72599842 None:intergenic
GATCTGTGGAGTGAGAAGTA+GGG 0.650471 3:+72598316 MsG0380015618.01.T01:CDS
CCTTCTGATGCGAACAACGG+TGG 0.652015 3:+72597957 MsG0380015618.01.T01:CDS
TTGTTTCTGATAGATTACAT+GGG 0.652931 3:+72599622 MsG0380015618.01.T01:intron
AAAGAAGTTCCACCTGCCAA+GGG 0.653496 3:-72599682 None:intergenic
GAGTTTCGTCACATTTACCG+TGG 0.654474 3:+72598092 MsG0380015618.01.T01:CDS
GAAGGGGAAGTTGTCTCCGG+TGG 0.654859 3:+72598388 MsG0380015618.01.T01:CDS
AAAGAAAACAGCATACTGCA+AGG 0.660360 3:-72601167 None:intergenic
TAAACCCTAGAATTGACGGA+GGG 0.662879 3:-72597684 None:intergenic
TGGTGTATTATCCGAGAGCG+GGG 0.665380 3:+72598459 MsG0380015618.01.T01:CDS
GGGGTGTTAACTGATGGAGA+TGG 0.666346 3:+72599764 MsG0380015618.01.T01:CDS
CGCCGATCCGAAAACCGATG+AGG 0.668414 3:+72597818 MsG0380015618.01.T01:CDS
GTGGTCAACAAATGCCGGCG+CGG 0.669526 3:-72598119 None:intergenic
ACTCCTTCTGATGCGAACAA+CGG 0.674390 3:+72597954 MsG0380015618.01.T01:CDS
AAGACACAATCTCGACACAT+CGG 0.674917 3:-72598291 None:intergenic
CACAAACCTACTCCAACCGG+TGG 0.675418 3:-72598138 None:intergenic
CGGCGGAAATGGCAGCACAG+GGG 0.678622 3:+72598423 MsG0380015618.01.T01:CDS
TGAACCCTGTGATAGAAAAG+GGG 0.678709 3:-72599790 None:intergenic
AGTGTTGCAAACTTCCAAGT+GGG 0.678749 3:+72599655 MsG0380015618.01.T01:CDS
CTGTGGAGTGAGAAGTAGGG+TGG 0.681702 3:+72598319 MsG0380015618.01.T01:CDS
CCCATTGAAAAGGACTAGAG+GGG 0.682404 3:+72599736 MsG0380015618.01.T01:CDS
TGTATTATCCGAGAGCGGGG+TGG 0.682628 3:+72598462 MsG0380015618.01.T01:CDS
AGTGGTGTATTATCCGAGAG+CGG 0.685012 3:+72598457 MsG0380015618.01.T01:CDS
AAGTGTTGCAAACTTCCAAG+TGG 0.685015 3:+72599654 MsG0380015618.01.T01:CDS
AAACCCTAGAATTGACGGAG+GGG 0.688106 3:-72597683 None:intergenic
GGATCCATACTATAATCCAA+CGG 0.690465 3:-72598023 None:intergenic
GAACTAATCGAACAGCACGA+CGG 0.693501 3:-72598235 None:intergenic
CATACATGAAGCATACGCCA+AGG 0.694470 3:-72598656 None:intergenic
ATCGGCGAGGAAATGAACGG+CGG 0.707383 3:-72597802 None:intergenic
CCGGTGATTGAAGCTGACGA+CGG 0.709175 3:+72597900 MsG0380015618.01.T01:CDS
TCCATACTATAATCCAACGG+AGG 0.710511 3:-72598020 None:intergenic
GTAAACCCTAGAATTGACGG+AGG 0.732924 3:-72597685 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTGAATATATATTTGAT+TGG - Chr3:72598876-72598895 None:intergenic 10.0%
!!! ATAATTTGATCATATTGATT+AGG + Chr3:72598751-72598770 MsG0380015618.01.T01:intron 15.0%
!!! CTATCTAAAATAACTAAAAT+TGG + Chr3:72599592-72599611 MsG0380015618.01.T01:intron 15.0%
!! AAGTTCAATGGATAAAAAAA+AGG + Chr3:72600959-72600978 MsG0380015618.01.T01:three_prime_UTR 20.0%
!! AATAAAGATTCAAAAGAAAG+AGG - Chr3:72598685-72598704 None:intergenic 20.0%
!! AATCTATCAGAAACAATAAA+TGG - Chr3:72599618-72599637 None:intergenic 20.0%
!! AGTATTCTTCATAAAAACAA+CGG - Chr3:72598192-72598211 None:intergenic 20.0%
!! AGTTCAATGGATAAAAAAAA+GGG + Chr3:72600960-72600979 MsG0380015618.01.T01:three_prime_UTR 20.0%
!! ATAAGATGTTCAACAATATA+AGG - Chr3:72601018-72601037 None:intergenic 20.0%
!! GAAACTAAGTATGTAATATT+TGG + Chr3:72601218-72601237 MsG0380015618.01.T01:three_prime_UTR 20.0%
!! GTCTAATACAAGAAAATAAA+TGG + Chr3:72600872-72600891 MsG0380015618.01.T01:three_prime_UTR 20.0%
!! TAATATTTCCTAAAGTACAA+TGG + Chr3:72601274-72601293 MsG0380015618.01.T01:three_prime_UTR 20.0%
!! TGTGCGTTATATAATAATTA+TGG + Chr3:72598719-72598738 MsG0380015618.01.T01:intron 20.0%
!!! ATTAATTTTGTTGCTTACTT+TGG + Chr3:72601096-72601115 MsG0380015618.01.T01:intron 20.0%
!!! TTAATTTTGTTGCTTACTTT+GGG + Chr3:72601097-72601116 MsG0380015618.01.T01:intron 20.0%
!!! TTTTTTCCTTGAGTTTTATA+TGG + Chr3:72600617-72600636 MsG0380015618.01.T01:three_prime_UTR 20.0%
! AAAAAGGAAACGAAAAAACA+AGG - Chr3:72599318-72599337 None:intergenic 25.0%
! AAAAGTAAATGAAAATGCAG+AGG + Chr3:72600753-72600772 MsG0380015618.01.T01:three_prime_UTR 25.0%
! AAAGTAAATGAAAATGCAGA+GGG + Chr3:72600754-72600773 MsG0380015618.01.T01:three_prime_UTR 25.0%
! AAAGTTGGAAAAACTTGAAA+CGG - Chr3:72599906-72599925 None:intergenic 25.0%
! AATACTATATTTGCATGAAG+AGG + Chr3:72598985-72599004 MsG0380015618.01.T01:intron 25.0%
! AGTGTTTATCATCTGTTTAA+AGG + Chr3:72599037-72599056 MsG0380015618.01.T01:intron 25.0%
! CAACAAATCAAATGTTAACA+TGG - Chr3:72599078-72599097 None:intergenic 25.0%
! GCAACAAAATTAATTGAACA+TGG - Chr3:72601090-72601109 None:intergenic 25.0%
! GTTCAATGGATAAAAAAAAG+GGG + Chr3:72600961-72600980 MsG0380015618.01.T01:three_prime_UTR 25.0%
! TCATTGTTCAGAACTTTATT+GGG + Chr3:72600905-72600924 MsG0380015618.01.T01:three_prime_UTR 25.0%
! TGACATAAAGTAGAGAAAAA+GGG + Chr3:72600709-72600728 MsG0380015618.01.T01:three_prime_UTR 25.0%
! TTAACAGTGAAATCATTCAA+CGG - Chr3:72597867-72597886 None:intergenic 25.0%
! TTCATTGTTCAGAACTTTAT+TGG + Chr3:72600904-72600923 MsG0380015618.01.T01:three_prime_UTR 25.0%
! TTGACATAAAGTAGAGAAAA+AGG + Chr3:72600708-72600727 MsG0380015618.01.T01:three_prime_UTR 25.0%
! TTGCTAAAATAGATTAAACG+TGG + Chr3:72598898-72598917 MsG0380015618.01.T01:intron 25.0%
! TTTGTTGAATTCAGGAAATT+TGG + Chr3:72599159-72599178 MsG0380015618.01.T01:intron 25.0%
!! AAACATGCATTTTATCTAGT+TGG + Chr3:72598774-72598793 MsG0380015618.01.T01:intron 25.0%
!! ATTAATTGATAACATAGGTC+TGG + Chr3:72600594-72600613 MsG0380015618.01.T01:three_prime_UTR 25.0%
!! ATTTCACTGTTAATTTTCCA+CGG + Chr3:72597874-72597893 MsG0380015618.01.T01:CDS 25.0%
!! CTTTATGTCAATATTTTCCT+AGG - Chr3:72600699-72600718 None:intergenic 25.0%
!! GTAAAATTTTGTGAAACCAA+TGG + Chr3:72599222-72599241 MsG0380015618.01.T01:intron 25.0%
!! GTTTTTATGAAGAATACTAG+AGG + Chr3:72598194-72598213 MsG0380015618.01.T01:CDS 25.0%
!! TAAGGAAAAATCATTTTGCA+AGG + Chr3:72598931-72598950 MsG0380015618.01.T01:intron 25.0%
!! TAGAACATAGAAGTGATTTT+AGG + Chr3:72599195-72599214 MsG0380015618.01.T01:intron 25.0%
!! TGATTTTTCTATATCTGACT+TGG + Chr3:72599447-72599466 MsG0380015618.01.T01:intron 25.0%
!! TTTGTTTGTCTTATTGAAAC+CGG + Chr3:72601188-72601207 MsG0380015618.01.T01:three_prime_UTR 25.0%
!! TTTTCGAACATAAGAAGTAA+CGG - Chr3:72597543-72597562 None:intergenic 25.0%
!!! ACTTAATGTTGCTTTCAAAA+TGG + Chr3:72598843-72598862 MsG0380015618.01.T01:intron 25.0%
!!! AGTATTGATTTTCTGTTATG+GGG - Chr3:72600796-72600815 None:intergenic 25.0%
!!! AGTGGATTAATTGATAACAT+AGG + Chr3:72600589-72600608 MsG0380015618.01.T01:three_prime_UTR 25.0%
!!! ATTGTTTCTGATAGATTACA+TGG + Chr3:72599621-72599640 MsG0380015618.01.T01:intron 25.0%
!!! GAGTATTGATTTTCTGTTAT+GGG - Chr3:72600797-72600816 None:intergenic 25.0%
!!! TTGTTTCTGATAGATTACAT+GGG + Chr3:72599622-72599641 MsG0380015618.01.T01:intron 25.0%
AAACCAATGGATACCATTAT+TGG + Chr3:72599235-72599254 MsG0380015618.01.T01:intron 30.0%
AACCAATGGATACCATTATT+GGG + Chr3:72599236-72599255 MsG0380015618.01.T01:intron 30.0%
AATCTCATAAGTCCCAATAA+TGG - Chr3:72599251-72599270 None:intergenic 30.0%
AGACATAAGAAATCAAAAGC+AGG - Chr3:72599484-72599503 None:intergenic 30.0%
AGTGAATCAAAGTTCTCAAT+AGG + Chr3:72600394-72600413 MsG0380015618.01.T01:three_prime_UTR 30.0%
ATACTTAGTTTCATTGTTCC+CGG - Chr3:72601210-72601229 None:intergenic 30.0%
ATGAGTATTCTCATGTGAAT+AGG + Chr3:72600830-72600849 MsG0380015618.01.T01:three_prime_UTR 30.0%
ATTTCCTAAAGTACAATGGT+TGG + Chr3:72601278-72601297 MsG0380015618.01.T01:three_prime_UTR 30.0%
CATTGTTCAGAACTTTATTG+GGG + Chr3:72600906-72600925 MsG0380015618.01.T01:three_prime_UTR 30.0%
GCAATCCAGATTTCAAAAAA+AGG - Chr3:72599334-72599353 None:intergenic 30.0%
GTAATCAACAAATTCTGCAA+CGG - Chr3:72598050-72598069 None:intergenic 30.0%
GTGAATCAAAGTTCTCAATA+GGG + Chr3:72600395-72600414 MsG0380015618.01.T01:three_prime_UTR 30.0%
GTTGAACATCTTATACTTGT+TGG + Chr3:72601024-72601043 MsG0380015618.01.T01:intron 30.0%
GTTTGTTCTAATCAAGTGAT+GGG + Chr3:72600538-72600557 MsG0380015618.01.T01:three_prime_UTR 30.0%
TCATGACCATATAAAACTCA+AGG - Chr3:72600626-72600645 None:intergenic 30.0%
TGAATTCAGGAAATTTGGTT+GGG + Chr3:72599164-72599183 MsG0380015618.01.T01:intron 30.0%
TTGAATTCAGGAAATTTGGT+TGG + Chr3:72599163-72599182 MsG0380015618.01.T01:intron 30.0%
! TTGTTGATTACTGATGTTCA+TGG + Chr3:72598059-72598078 MsG0380015618.01.T01:CDS 30.0%
! TTGTTTGTCTTATTGAAACC+GGG + Chr3:72601189-72601208 MsG0380015618.01.T01:three_prime_UTR 30.0%
!! AAAGTACTGTAACTCAACAA+TGG - Chr3:72599845-72599864 None:intergenic 30.0%
!! GATTCTTCGTATCATTTTTG+TGG + Chr3:72599504-72599523 MsG0380015618.01.T01:intron 30.0%
!! GTTGAAAAAGATTTTAACCC+CGG - Chr3:72599983-72600002 None:intergenic 30.0%
!!! CGAGTATTGATTTTCTGTTA+TGG - Chr3:72600798-72600817 None:intergenic 30.0%
!!! CGTTTCCTTTTTTTGAAATC+TGG + Chr3:72599326-72599345 MsG0380015618.01.T01:intron 30.0%
!!! GGGGTTAAAATCTTTTTCAA+CGG + Chr3:72599982-72600001 MsG0380015618.01.T01:CDS 30.0%
!!! GGTATTTTTAGCTGTCTTAT+TGG + Chr3:72600496-72600515 MsG0380015618.01.T01:three_prime_UTR 30.0%
AAAAAAGATGCAGCTTCTCA+TGG + Chr3:72600932-72600951 MsG0380015618.01.T01:three_prime_UTR 35.0%
AAAGAAAACAGCATACTGCA+AGG - Chr3:72601170-72601189 None:intergenic 35.0%
AATGAGAATCAAAATGGCTG+TGG + Chr3:72598547-72598566 MsG0380015618.01.T01:CDS 35.0%
ACCATTTGAACCACTTTCAA+CGG - Chr3:72600170-72600189 None:intergenic 35.0%
AGGAAACGAAAAAACAAGGA+AGG - Chr3:72599314-72599333 None:intergenic 35.0%
AGGGTTCACTAATTCAACAA+TGG + Chr3:72599805-72599824 MsG0380015618.01.T01:CDS 35.0%
GATAACTTCCGTCTTTGTAT+GGG + Chr3:72599932-72599951 MsG0380015618.01.T01:CDS 35.0%
GGATCCATACTATAATCCAA+CGG - Chr3:72598026-72598045 None:intergenic 35.0%
GGGTTCACTAATTCAACAAT+GGG + Chr3:72599806-72599825 MsG0380015618.01.T01:CDS 35.0%
GGTTGAATGAAAATGAGTGA+GGG - Chr3:72597567-72597586 None:intergenic 35.0%
GTAGTAAACCCTAGAATTGA+CGG - Chr3:72597691-72597710 None:intergenic 35.0%
TCCTGGAATGAGAATCAAAA+TGG + Chr3:72598541-72598560 MsG0380015618.01.T01:CDS 35.0%
TGATAACTTCCGTCTTTGTA+TGG + Chr3:72599931-72599950 MsG0380015618.01.T01:CDS 35.0%
TGATATATGATGCCTGTTTC+TGG + Chr3:72600643-72600662 MsG0380015618.01.T01:three_prime_UTR 35.0%
TGGTTGAATGAAAATGAGTG+AGG - Chr3:72597568-72597587 None:intergenic 35.0%
TGTGCATATATTCTCACAAG+TGG + Chr3:72600571-72600590 MsG0380015618.01.T01:three_prime_UTR 35.0%
TTCCTGAATTCAACAAAGCA+GGG - Chr3:72599156-72599175 None:intergenic 35.0%
TTGCATGAAGAGGTTGAAAT+GGG + Chr3:72598995-72599014 MsG0380015618.01.T01:intron 35.0%
TTGTTCAGTTGCTTCTGTTA+CGG + Chr3:72599095-72599114 MsG0380015618.01.T01:intron 35.0%
TTTCCTGAATTCAACAAAGC+AGG - Chr3:72599157-72599176 None:intergenic 35.0%
TTTGCATGAAGAGGTTGAAA+TGG + Chr3:72598994-72599013 MsG0380015618.01.T01:intron 35.0%
! AGTAGTTTGTGTTAGCTCAA+TGG + Chr3:72600475-72600494 MsG0380015618.01.T01:three_prime_UTR 35.0%
! ATAAGAAGTAACGGAATCGA+AGG - Chr3:72597534-72597553 None:intergenic 35.0%
! GGTTTGTTCTAATCAAGTGA+TGG + Chr3:72600537-72600556 MsG0380015618.01.T01:three_prime_UTR 35.0%
! GTTGCTTTCAAAATGGAATG+TGG + Chr3:72598850-72598869 MsG0380015618.01.T01:intron 35.0%
! TAGCTGTCTTATTGGAATGT+TGG + Chr3:72600504-72600523 MsG0380015618.01.T01:three_prime_UTR 35.0%
! TCAAGTTTTTCCAACTTTCC+AGG + Chr3:72599908-72599927 MsG0380015618.01.T01:CDS 35.0%
! TGATGTTCATGGTTTGACTT+GGG + Chr3:72598070-72598089 MsG0380015618.01.T01:CDS 35.0%
! TGGAATGTTGGCATGTTTTA+GGG + Chr3:72600516-72600535 MsG0380015618.01.T01:three_prime_UTR 35.0%
! TGTTAATTTTCCACGGATTC+CGG + Chr3:72597881-72597900 MsG0380015618.01.T01:CDS 35.0%
! TTGGAATGTTGGCATGTTTT+AGG + Chr3:72600515-72600534 MsG0380015618.01.T01:three_prime_UTR 35.0%
! TTTGACTGAGAATGCTTTTG+TGG + Chr3:72598804-72598823 MsG0380015618.01.T01:intron 35.0%
! TTTTCAACGGATCTAAACGT+TGG + Chr3:72599995-72600014 MsG0380015618.01.T01:CDS 35.0%
!! AAACGTGGCATGTGTTTTTA+AGG + Chr3:72598913-72598932 MsG0380015618.01.T01:intron 35.0%
!! ATTGATTTTCTGTTATGGGG+TGG - Chr3:72600793-72600812 None:intergenic 35.0%
AACGGAAAATAGATCATGCC+TGG - Chr3:72599888-72599907 None:intergenic 40.0%
AACTGCAACTCAATGAAACC+CGG + Chr3:72600097-72600116 MsG0380015618.01.T01:CDS 40.0%
AAGACACAATCTCGACACAT+CGG - Chr3:72598294-72598313 None:intergenic 40.0%
AAGCTTAGCGAAAACCTCAT+CGG - Chr3:72597835-72597854 None:intergenic 40.0%
ACAAAATCTGTGCCAAAGGA+AGG - Chr3:72600067-72600086 None:intergenic 40.0%
AGAAGAGGTGAGAGATTGTT+CGG - Chr3:72597750-72597769 None:intergenic 40.0%
AGGAGTTACCCATACAAAGA+CGG - Chr3:72599943-72599962 None:intergenic 40.0%
AGTAAGTCGAATCCTCAAGA+GGG - Chr3:72600252-72600271 None:intergenic 40.0%
AGTGAACCCTGTGATAGAAA+AGG - Chr3:72599795-72599814 None:intergenic 40.0%
AGTGTTGCAAACTTCCAAGT+GGG + Chr3:72599655-72599674 MsG0380015618.01.T01:CDS 40.0%
ATAAGGACACTCACTACAGA+TGG - Chr3:72601001-72601020 None:intergenic 40.0%
ATCAACAAATTCTGCAACGG+AGG - Chr3:72598047-72598066 None:intergenic 40.0%
ATCGAATCAGCACAAAACCT+CGG - Chr3:72597996-72598015 None:intergenic 40.0%
ATGATTCTTCCAGGACTACT+TGG + Chr3:72598576-72598595 MsG0380015618.01.T01:CDS 40.0%
ATGCACATAAGTAGCTGTAC+AGG + Chr3:72600357-72600376 MsG0380015618.01.T01:three_prime_UTR 40.0%
CATACTGCAAGGTCAAAAGA+TGG - Chr3:72601159-72601178 None:intergenic 40.0%
CCAAATAGCTGAAACGTTAC+AGG - Chr3:72600124-72600143 None:intergenic 40.0%
CCATTTGAACCACTTTCAAC+GGG - Chr3:72600169-72600188 None:intergenic 40.0%
CCTGTAACGTTTCAGCTATT+TGG + Chr3:72600121-72600140 MsG0380015618.01.T01:CDS 40.0%
CTGATGTTCATGGTTTGACT+TGG + Chr3:72598069-72598088 MsG0380015618.01.T01:CDS 40.0%
CTTACTCAAAATTGCTCGAC+AGG + Chr3:72600266-72600285 MsG0380015618.01.T01:CDS 40.0%
CTTTGTATGGGTAACTCCTT+TGG + Chr3:72599944-72599963 MsG0380015618.01.T01:CDS 40.0%
GAAGTTATCACCTGGAAAGT+TGG - Chr3:72599921-72599940 None:intergenic 40.0%
GTCCCAATAATGGTATCCAT+TGG - Chr3:72599241-72599260 None:intergenic 40.0%
GTGAACCCTGTGATAGAAAA+GGG - Chr3:72599794-72599813 None:intergenic 40.0%
GTTTCAAGGTGTAGTATCTC+AGG + Chr3:72598598-72598617 MsG0380015618.01.T01:CDS 40.0%
TAAACCCTAGAATTGACGGA+GGG - Chr3:72597687-72597706 None:intergenic 40.0%
TAAGGACACTCACTACAGAT+GGG - Chr3:72601000-72601019 None:intergenic 40.0%
TCAAATGGTACTGTTAGCAC+AGG + Chr3:72600181-72600200 MsG0380015618.01.T01:CDS 40.0%
TCCATACTATAATCCAACGG+AGG - Chr3:72598023-72598042 None:intergenic 40.0%
TCCTCCGTTGGATTATAGTA+TGG + Chr3:72598019-72598038 MsG0380015618.01.T01:CDS 40.0%
TCTCATGGCATGAAGTTCAA+TGG + Chr3:72600947-72600966 MsG0380015618.01.T01:three_prime_UTR 40.0%
TGAACCCTGTGATAGAAAAG+GGG - Chr3:72599793-72599812 None:intergenic 40.0%
TGAAGAGGTTGAAATGGGTA+AGG + Chr3:72599000-72599019 MsG0380015618.01.T01:intron 40.0%
TTCAGGAAATTTGGTTGGGT+TGG + Chr3:72599168-72599187 MsG0380015618.01.T01:intron 40.0%
TTGGAAGTTTGCAACACTTC+AGG - Chr3:72599653-72599672 None:intergenic 40.0%
! AAGTGTTGCAAACTTCCAAG+TGG + Chr3:72599654-72599673 MsG0380015618.01.T01:CDS 40.0%
! ACTAGAGGTGCAATGTTCAT+CGG + Chr3:72598209-72598228 MsG0380015618.01.T01:CDS 40.0%
! AGTTACAGTACTTTTCCTGC+TGG + Chr3:72599851-72599870 MsG0380015618.01.T01:CDS 40.0%
! CCTTTGGCACAGATTTTGTT+CGG + Chr3:72600068-72600087 MsG0380015618.01.T01:CDS 40.0%
! CTGTTCGATTAGTTCCGAAT+CGG + Chr3:72598243-72598262 MsG0380015618.01.T01:CDS 40.0%
! GTCGGATTTTGTGTTGAAAG+CGG + Chr3:72598484-72598503 MsG0380015618.01.T01:CDS 40.0%
! TACCCTGCTTTGTTGAATTC+AGG + Chr3:72599151-72599170 MsG0380015618.01.T01:intron 40.0%
! TGATTCGATTTTTCCTCCGT+TGG + Chr3:72598007-72598026 MsG0380015618.01.T01:CDS 40.0%
!! GTGTTTTTGCTCTGTGGTTT+TGG - Chr3:72600675-72600694 None:intergenic 40.0%
!!! GCCATTTTGATTCTCATTCC+AGG - Chr3:72598545-72598564 None:intergenic 40.0%
!!! TTGAGTGTGGTTGCGTTTTT+TGG - Chr3:72597621-72597640 None:intergenic 40.0%
!!! TTTTGGTTTGCACCAGAAAC+AGG - Chr3:72600658-72600677 None:intergenic 40.0%
AAAAGATGGTCCTGTCTGCA+TGG - Chr3:72601145-72601164 None:intergenic 45.0%
AAACCCTAGAATTGACGGAG+GGG - Chr3:72597686-72597705 None:intergenic 45.0%
AAAGAAGTTCCACCTGCCAA+GGG - Chr3:72599685-72599704 None:intergenic 45.0%
AAATCCCCTCCGTCAATTCT+AGG + Chr3:72597679-72597698 MsG0380015618.01.T01:CDS 45.0%
AAATTGCTCGACAGGCTTGA+TGG + Chr3:72600274-72600293 MsG0380015618.01.T01:CDS 45.0%
AATCCCCTCCGTCAATTCTA+GGG + Chr3:72597680-72597699 MsG0380015618.01.T01:CDS 45.0%
ACAGGAGATGACAGCAGTAA+GGG + Chr3:72600199-72600218 MsG0380015618.01.T01:CDS 45.0%
ACCTTGAAACCAAGTAGTCC+TGG - Chr3:72598588-72598607 None:intergenic 45.0%
ACTCCTTCTGATGCGAACAA+CGG + Chr3:72597954-72597973 MsG0380015618.01.T01:CDS 45.0%
ACTGCAACTCAATGAAACCC+GGG + Chr3:72600098-72600117 MsG0380015618.01.T01:CDS 45.0%
AGATTGTGTCTTCCGATCTG+TGG + Chr3:72598302-72598321 MsG0380015618.01.T01:CDS 45.0%
AGGCATTAACAACCCTCTTG+AGG + Chr3:72600237-72600256 MsG0380015618.01.T01:CDS 45.0%
AGGGTTTACTACTTCCCTCA+AGG + Chr3:72597699-72597718 MsG0380015618.01.T01:CDS 45.0%
AGGTTTCTGTTCCTGATCGT+GGG + Chr3:72598618-72598637 MsG0380015618.01.T01:CDS 45.0%
AGTACTTGGCGGTTCATGAT+TGG - Chr3:72597588-72597607 None:intergenic 45.0%
AGTGGTGTATTATCCGAGAG+CGG + Chr3:72598457-72598476 MsG0380015618.01.T01:CDS 45.0%
ATAGCATGCCTCAACTGTAG+AGG - Chr3:72600314-72600333 None:intergenic 45.0%
CAAAGACGGAAGTTATCACC+TGG - Chr3:72599929-72599948 None:intergenic 45.0%
CAAAGGAAGGCAAACTACTC+TGG - Chr3:72600054-72600073 None:intergenic 45.0%
CACAGAGCAAAAACACTCCT+AGG + Chr3:72600679-72600698 MsG0380015618.01.T01:three_prime_UTR 45.0%
CATACATGAAGCATACGCCA+AGG - Chr3:72598659-72598678 None:intergenic 45.0%
CCAAATAGCCTCTACAGTTG+AGG + Chr3:72600303-72600322 MsG0380015618.01.T01:CDS 45.0%
CCCATTGAAAAGGACTAGAG+GGG + Chr3:72599736-72599755 MsG0380015618.01.T01:CDS 45.0%
CCCCATTGAAAAGGACTAGA+GGG + Chr3:72599735-72599754 MsG0380015618.01.T01:CDS 45.0%
CCCGTTGAAAGTGGTTCAAA+TGG + Chr3:72600166-72600185 MsG0380015618.01.T01:CDS 45.0%
CCGAACAAAATCTGTGCCAA+AGG - Chr3:72600071-72600090 None:intergenic 45.0%
CCTCAACTGTAGAGGCTATT+TGG - Chr3:72600306-72600325 None:intergenic 45.0%
CTACTTCTCACTCCACAGAT+CGG - Chr3:72598317-72598336 None:intergenic 45.0%
CTTGGCGTATGCTTCATGTA+TGG + Chr3:72598657-72598676 MsG0380015618.01.T01:intron 45.0%
GAACTAATCGAACAGCACGA+CGG - Chr3:72598238-72598257 None:intergenic 45.0%
GAGTAAGTCGAATCCTCAAG+AGG - Chr3:72600253-72600272 None:intergenic 45.0%
GAGTTTCGTCACATTTACCG+TGG + Chr3:72598092-72598111 MsG0380015618.01.T01:CDS 45.0%
GATCTGTGGAGTGAGAAGTA+GGG + Chr3:72598316-72598335 MsG0380015618.01.T01:CDS 45.0%
GTAAACCCTAGAATTGACGG+AGG - Chr3:72597688-72597707 None:intergenic 45.0%
GTTCACAAACCTACTCCAAC+CGG - Chr3:72598144-72598163 None:intergenic 45.0%
TCCAGGACTACTTGGTTTCA+AGG + Chr3:72598584-72598603 MsG0380015618.01.T01:CDS 45.0%
TGGAGACTGATGATTCTTCC+AGG + Chr3:72598567-72598586 MsG0380015618.01.T01:CDS 45.0%
TGTTCGGAAGTGAAGTAGCT+TGG - Chr3:72597734-72597753 None:intergenic 45.0%
! ACCCCTCTAGTCCTTTTCAA+TGG - Chr3:72599740-72599759 None:intergenic 45.0%
! AGTCCTTTTCAATGGGGGAA+AGG - Chr3:72599732-72599751 None:intergenic 45.0%
! ATTTTCTGTTATGGGGTGGC+AGG - Chr3:72600789-72600808 None:intergenic 45.0%
! CAGAGTAGTTTGCCTTCCTT+TGG + Chr3:72600052-72600071 MsG0380015618.01.T01:CDS 45.0%
! CCCCTCTAGTCCTTTTCAAT+GGG - Chr3:72599739-72599758 None:intergenic 45.0%
! CCCTCTAGTCCTTTTCAATG+GGG - Chr3:72599738-72599757 None:intergenic 45.0%
! CCTCTAGTCCTTTTCAATGG+GGG - Chr3:72599737-72599756 None:intergenic 45.0%
! GAGACCCCTTTTCTATCACA+GGG + Chr3:72599786-72599805 MsG0380015618.01.T01:CDS 45.0%
! GGATTTTGTGTTGAAAGCGG+AGG + Chr3:72598487-72598506 MsG0380015618.01.T01:CDS 45.0%
! GTATCTGGGGTGTTAACTGA+TGG + Chr3:72599758-72599777 MsG0380015618.01.T01:CDS 45.0%
! GTCCTTTTCAATGGGGGAAA+GGG - Chr3:72599731-72599750 None:intergenic 45.0%
! TTTTCTGTTATGGGGTGGCA+GGG - Chr3:72600788-72600807 None:intergenic 45.0%
!! AAAAGGACTAGAGGGGTATC+TGG + Chr3:72599743-72599762 MsG0380015618.01.T01:CDS 45.0%
!! AAAGGACTAGAGGGGTATCT+GGG + Chr3:72599744-72599763 MsG0380015618.01.T01:CDS 45.0%
!! AACGCTAAGAAGCTTGTTGC+TGG + Chr3:72598161-72598180 MsG0380015618.01.T01:CDS 45.0%
!! ATGAGTGTTACTTGGTGTCC+TGG + Chr3:72598524-72598543 MsG0380015618.01.T01:CDS 45.0%
!!! AACCTCATCGGTTTTCGGAT+CGG - Chr3:72597823-72597842 None:intergenic 45.0%
!!! CTAGGAGTGTTTTTGCTCTG+TGG - Chr3:72600681-72600700 None:intergenic 45.0%
!!! GCGAAAACCTCATCGGTTTT+CGG - Chr3:72597828-72597847 None:intergenic 45.0%
!!! GTGGTTGCGTTTTTTGGAGA+CGG - Chr3:72597615-72597634 None:intergenic 45.0%
AACCGGTGGTCAACAAATGC+CGG - Chr3:72598127-72598146 None:intergenic 50.0%
AACGTTGGCAGTTCTCACTC+TGG + Chr3:72600010-72600029 MsG0380015618.01.T01:CDS 50.0%
AAGGGCTGCAACGAAACTGA+AGG + Chr3:72600217-72600236 MsG0380015618.01.T01:CDS 50.0%
ACAGAACAGCCCGTTGAAAG+TGG + Chr3:72600157-72600176 MsG0380015618.01.T01:CDS 50.0%
ACTTTGGGTGCTTTCCATGC+AGG + Chr3:72601112-72601131 MsG0380015618.01.T01:intron 50.0%
AGGTACTTCTCCATGCAGAC+AGG + Chr3:72601132-72601151 MsG0380015618.01.T01:intron 50.0%
ATTGACGGAGGGGATTTGCA+CGG - Chr3:72597676-72597695 None:intergenic 50.0%
CACAGGAGATGACAGCAGTA+AGG + Chr3:72600198-72600217 MsG0380015618.01.T01:CDS 50.0%
CAGGTTTCTGTTCCTGATCG+TGG + Chr3:72598617-72598636 MsG0380015618.01.T01:CDS 50.0%
CCCCCATTGAAAAGGACTAG+AGG + Chr3:72599734-72599753 MsG0380015618.01.T01:CDS 50.0%
CGATCTGTGGAGTGAGAAGT+AGG + Chr3:72598315-72598334 MsG0380015618.01.T01:CDS 50.0%
CTACTTCCCTCAAGGTCACA+TGG + Chr3:72597707-72597726 MsG0380015618.01.T01:CDS 50.0%
CTGTAGAGGCTATTTGGCAC+TGG - Chr3:72600300-72600319 None:intergenic 50.0%
CTTGGTCCATGTGACCTTGA+GGG - Chr3:72597716-72597735 None:intergenic 50.0%
GAAAGAAGTTCCACCTGCCA+AGG - Chr3:72599686-72599705 None:intergenic 50.0%
GAGACGGAGCAGAGAATGTA+GGG - Chr3:72597783-72597802 None:intergenic 50.0%
GGATGAAGAAGAGAAGCTGG+TGG + Chr3:72598340-72598359 MsG0380015618.01.T01:CDS 50.0%
GGTGGATGAAGAAGAGAAGC+TGG + Chr3:72598337-72598356 MsG0380015618.01.T01:CDS 50.0%
GGTTTCTGTTCCTGATCGTG+GGG + Chr3:72598619-72598638 MsG0380015618.01.T01:CDS 50.0%
GTGGTGTATTATCCGAGAGC+GGG + Chr3:72598458-72598477 MsG0380015618.01.T01:CDS 50.0%
TAGCTGAAACGTTACAGGCC+CGG - Chr3:72600119-72600138 None:intergenic 50.0%
TAGGGACGAGAGAGAAGAAG+AGG - Chr3:72597765-72597784 None:intergenic 50.0%
TGGTGTATTATCCGAGAGCG+GGG + Chr3:72598459-72598478 MsG0380015618.01.T01:CDS 50.0%
TGTGTTGAAAGCGGAGGTTG+TGG + Chr3:72598493-72598512 MsG0380015618.01.T01:CDS 50.0%
TTGGAGACGGTGGTAGTACT+TGG - Chr3:72597602-72597621 None:intergenic 50.0%
! ACTTTTCCTGCTGGCATGCA+GGG + Chr3:72599860-72599879 MsG0380015618.01.T01:CDS 50.0%
! AGAGAAGCTGGTGGATGAGA+AGG + Chr3:72598349-72598368 MsG0380015618.01.T01:CDS 50.0%
! ATGCGGCGATGAGTGTTACT+TGG + Chr3:72598516-72598535 MsG0380015618.01.T01:CDS 50.0%
! GGAGACCCCTTTTCTATCAC+AGG + Chr3:72599785-72599804 MsG0380015618.01.T01:CDS 50.0%
! GGGGTGTTAACTGATGGAGA+TGG + Chr3:72599764-72599783 MsG0380015618.01.T01:CDS 50.0%
! TACTTTTCCTGCTGGCATGC+AGG + Chr3:72599859-72599878 MsG0380015618.01.T01:CDS 50.0%
!! AAGGACTAGAGGGGTATCTG+GGG + Chr3:72599745-72599764 MsG0380015618.01.T01:CDS 50.0%
!! TGCATGGAGAAGTACCTGCA+TGG - Chr3:72601129-72601148 None:intergenic 50.0%
!!! GTGGTGGATTTTCTGTTCCG+AGG + Chr3:72597976-72597995 MsG0380015618.01.T01:CDS 50.0%
!!! GTTGCGTTTTTTGGAGACGG+TGG - Chr3:72597612-72597631 None:intergenic 50.0%
!!! TGGATGAGAAGGCGTTTTCG+AGG + Chr3:72598360-72598379 MsG0380015618.01.T01:CDS 50.0%
AAACTCTGGCGAGCTATCGC+CGG + Chr3:72597645-72597664 MsG0380015618.01.T01:CDS 55.0%
AAATGGCAGCACAGGGGATG+GGG + Chr3:72598429-72598448 MsG0380015618.01.T01:CDS 55.0%
ACAGGGGATGGGGTTTGAAG+TGG + Chr3:72598439-72598458 MsG0380015618.01.T01:CDS 55.0%
AGCTGAAACGTTACAGGCCC+GGG - Chr3:72600118-72600137 None:intergenic 55.0%
ATCGGCGAGGAAATGAACGG+CGG - Chr3:72597805-72597824 None:intergenic 55.0%
CACAAACCTACTCCAACCGG+TGG - Chr3:72598141-72598160 None:intergenic 55.0%
CCACACTCAACCCCAAACTC+TGG + Chr3:72597631-72597650 MsG0380015618.01.T01:CDS 55.0%
CCACCGTTGTTCGCATCAGA+AGG - Chr3:72597960-72597979 None:intergenic 55.0%
CCGGTGATTGAAGCTGACGA+CGG + Chr3:72597900-72597919 MsG0380015618.01.T01:CDS 55.0%
CCGTCGTCAGCTTCAATCAC+CGG - Chr3:72597903-72597922 None:intergenic 55.0%
CCTTCTGATGCGAACAACGG+TGG + Chr3:72597957-72597976 MsG0380015618.01.T01:CDS 55.0%
CGATAGCTCGCCAGAGTTTG+GGG - Chr3:72597644-72597663 None:intergenic 55.0%
CGCCCTTTCCCCCATTGAAA+AGG + Chr3:72599726-72599745 MsG0380015618.01.T01:CDS 55.0%
CGGATCGGCGAGGAAATGAA+CGG - Chr3:72597808-72597827 None:intergenic 55.0%
CTGTGGAGTGAGAAGTAGGG+TGG + Chr3:72598319-72598338 MsG0380015618.01.T01:CDS 55.0%
CTTTGGCAGCAACACAGTGC+CGG + Chr3:72599961-72599980 MsG0380015618.01.T01:CDS 55.0%
GAAAGCGGAGGTTGTGGATG+CGG + Chr3:72598499-72598518 MsG0380015618.01.T01:CDS 55.0%
GAAATGGCAGCACAGGGGAT+GGG + Chr3:72598428-72598447 MsG0380015618.01.T01:CDS 55.0%
GAGACGGTGGTAGTACTTGG+CGG - Chr3:72597599-72597618 None:intergenic 55.0%
GAGGAAATGAACGGCGGAGA+CGG - Chr3:72597799-72597818 None:intergenic 55.0%
GCGATAGCTCGCCAGAGTTT+GGG - Chr3:72597645-72597664 None:intergenic 55.0%
GCTTCAATCACCGGAATCCG+TGG - Chr3:72597894-72597913 None:intergenic 55.0%
GCTTGGTCCATGTGACCTTG+AGG - Chr3:72597717-72597736 None:intergenic 55.0%
GGAGACGGAGCAGAGAATGT+AGG - Chr3:72597784-72597803 None:intergenic 55.0%
TCTGATGCGAACAACGGTGG+TGG + Chr3:72597960-72597979 MsG0380015618.01.T01:CDS 55.0%
TGTATTATCCGAGAGCGGGG+TGG + Chr3:72598462-72598481 MsG0380015618.01.T01:CDS 55.0%
TTGAAGCTGACGACGGTGAG+AGG + Chr3:72597907-72597926 MsG0380015618.01.T01:CDS 55.0%
TTTGGCAGCAACACAGTGCC+GGG + Chr3:72599962-72599981 MsG0380015618.01.T01:CDS 55.0%
! ATGGGGGAAAGGGCGTATGA+AGG - Chr3:72599721-72599740 None:intergenic 55.0%
! CCAGAGTTTGGGGTTGAGTG+TGG - Chr3:72597634-72597653 None:intergenic 55.0%
! GGAAAGGGCGTATGAAGGGA+AGG - Chr3:72599716-72599735 None:intergenic 55.0%
! GGCATTTGTTGACCACCGGT+TGG + Chr3:72598126-72598145 MsG0380015618.01.T01:CDS 55.0%
! TGGGGGAAAGGGCGTATGAA+GGG - Chr3:72599720-72599739 None:intergenic 55.0%
! TGTTGACCACCGGTTGGAGT+AGG + Chr3:72598132-72598151 MsG0380015618.01.T01:CDS 55.0%
!! GGCAAACTACTCTGGCTCTC+TGG - Chr3:72600046-72600065 None:intergenic 55.0%
!!! AGAAGGCGTTTTCGAGGCAC+GGG + Chr3:72598366-72598385 MsG0380015618.01.T01:CDS 55.0%
!!! GAGAAGGCGTTTTCGAGGCA+CGG + Chr3:72598365-72598384 MsG0380015618.01.T01:CDS 55.0%
AAATCCGACCACCCCGCTCT+CGG - Chr3:72598473-72598492 None:intergenic 60.0%
ATCGGAGCAAACACCGCCAC+CGG - Chr3:72598276-72598295 None:intergenic 60.0%
CGCCGATCCGAAAACCGATG+AGG + Chr3:72597818-72597837 MsG0380015618.01.T01:CDS 60.0%
CGGGAAGGGGAAGTTGTCTC+CGG + Chr3:72598385-72598404 MsG0380015618.01.T01:CDS 60.0%
CTGTTCCTGATCGTGGGGCT+TGG + Chr3:72598624-72598643 MsG0380015618.01.T01:CDS 60.0%
CTTCCAAGTGGGTCAGCCCT+TGG + Chr3:72599666-72599685 MsG0380015618.01.T01:CDS 60.0%
GAAGGGGAAGTTGTCTCCGG+TGG + Chr3:72598388-72598407 MsG0380015618.01.T01:CDS 60.0%
GGAAATGGCAGCACAGGGGA+TGG + Chr3:72598427-72598446 MsG0380015618.01.T01:CDS 60.0%
GGCGATAGCTCGCCAGAGTT+TGG - Chr3:72597646-72597665 None:intergenic 60.0%
GGGCTTGGAGAGGTTCACCT+TGG + Chr3:72598639-72598658 MsG0380015618.01.T01:CDS 60.0%
GTGGTCAACAAATGCCGGCG+CGG - Chr3:72598122-72598141 None:intergenic 60.0%
GTTCCGAATCGGAGTAGCGC+CGG + Chr3:72598254-72598273 MsG0380015618.01.T01:CDS 60.0%
TTATCCGAGAGCGGGGTGGT+CGG + Chr3:72598466-72598485 MsG0380015618.01.T01:CDS 60.0%
TTGGCAGCAACACAGTGCCG+GGG + Chr3:72599963-72599982 MsG0380015618.01.T01:CDS 60.0%
! CGCCGGCATTTGTTGACCAC+CGG + Chr3:72598122-72598141 MsG0380015618.01.T01:CDS 60.0%
! CGGCACTGTGTTGCTGCCAA+AGG - Chr3:72599963-72599982 None:intergenic 60.0%
!! CGTTTTCGAGGCACGGGAAG+GGG + Chr3:72598372-72598391 MsG0380015618.01.T01:CDS 60.0%
!! GCGTTTTCGAGGCACGGGAA+GGG + Chr3:72598371-72598390 MsG0380015618.01.T01:CDS 60.0%
!!! CATCGGTTTTCGGATCGGCG+AGG - Chr3:72597818-72597837 None:intergenic 60.0%
CAAGTGGGTCAGCCCTTGGC+AGG + Chr3:72599670-72599689 MsG0380015618.01.T01:CDS 65.0%
CCACCGGCGCTACTCCGATT+CGG - Chr3:72598260-72598279 None:intergenic 65.0%
CCTCTCCAAGCCCCACGATC+AGG - Chr3:72598632-72598651 None:intergenic 65.0%
CCTGATCGTGGGGCTTGGAG+AGG + Chr3:72598629-72598648 MsG0380015618.01.T01:CDS 65.0%
CGGCGGAAATGGCAGCACAG+GGG + Chr3:72598423-72598442 MsG0380015618.01.T01:CDS 65.0%
CTGCCAAGGGCTGACCCACT+TGG - Chr3:72599672-72599691 None:intergenic 65.0%
GCGGCGGAAATGGCAGCACA+GGG + Chr3:72598422-72598441 MsG0380015618.01.T01:CDS 65.0%
GGGGAAGTTGTCTCCGGTGG+CGG + Chr3:72598391-72598410 MsG0380015618.01.T01:CDS 65.0%
TTTACCGTGGAACGCCGCGC+CGG + Chr3:72598105-72598124 MsG0380015618.01.T01:CDS 65.0%
! GTTGTCTCCGGTGGCGGTTG+CGG + Chr3:72598397-72598416 MsG0380015618.01.T01:CDS 65.0%
!! AATCGGAGTAGCGCCGGTGG+CGG + Chr3:72598260-72598279 MsG0380015618.01.T01:CDS 65.0%
!! GGCGTTTTCGAGGCACGGGA+AGG + Chr3:72598370-72598389 MsG0380015618.01.T01:CDS 65.0%
AATGCCGGCGCGGCGTTCCA+CGG - Chr3:72598112-72598131 None:intergenic 70.0%
CTGCTGGCATGCAGGGAGCC+AGG + Chr3:72599867-72599886 MsG0380015618.01.T01:CDS 70.0%
CTGGCTCCCTGCATGCCAGC+AGG - Chr3:72599869-72599888 None:intergenic 70.0%
GGCGGCGGAAATGGCAGCAC+AGG + Chr3:72598421-72598440 MsG0380015618.01.T01:CDS 70.0%
GGGGATTTGCACGGCAGCGC+CGG - Chr3:72597667-72597686 None:intergenic 70.0%
GGTTGCGGAGGCGGCGGAAA+TGG + Chr3:72598412-72598431 MsG0380015618.01.T01:CDS 70.0%
GTGGGTCAGCCCTTGGCAGG+TGG + Chr3:72599673-72599692 MsG0380015618.01.T01:CDS 70.0%
! CCGAATCGGAGTAGCGCCGG+TGG + Chr3:72598257-72598276 MsG0380015618.01.T01:CDS 70.0%
! GTCTCCGGTGGCGGTTGCGG+AGG + Chr3:72598400-72598419 MsG0380015618.01.T01:CDS 75.0%
! TCCGGTGGCGGTTGCGGAGG+CGG + Chr3:72598403-72598422 MsG0380015618.01.T01:CDS 75.0%
! GCCGCCTCCGCAACCGCCAC+CGG - Chr3:72598407-72598426 None:intergenic 80.0%
!! GGTGGCGGTTGCGGAGGCGG+CGG + Chr3:72598406-72598425 MsG0380015618.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 72597469 72601302 72597469 ID=MsG0380015618.01;Name=MsG0380015618.01
Chr3 mRNA 72597469 72601302 72597469 ID=MsG0380015618.01.T01;Parent=MsG0380015618.01;Name=MsG0380015618.01.T01;_AED=0.00;_eAED=0.00;_QI=83|1|1|1|0.5|0.33|3|836|608
Chr3 exon 72597469 72598673 72597469 ID=MsG0380015618.01.T01:exon:14035;Parent=MsG0380015618.01.T01
Chr3 exon 72599635 72601006 72599635 ID=MsG0380015618.01.T01:exon:14036;Parent=MsG0380015618.01.T01
Chr3 exon 72601134 72601302 72601134 ID=MsG0380015618.01.T01:exon:14037;Parent=MsG0380015618.01.T01
Chr3 five_prime_UTR 72597469 72597551 72597469 ID=MsG0380015618.01.T01:five_prime_utr;Parent=MsG0380015618.01.T01
Chr3 CDS 72597552 72598673 72597552 ID=MsG0380015618.01.T01:cds;Parent=MsG0380015618.01.T01
Chr3 CDS 72599635 72600339 72599635 ID=MsG0380015618.01.T01:cds;Parent=MsG0380015618.01.T01
Chr3 three_prime_UTR 72600340 72601006 72600340 ID=MsG0380015618.01.T01:three_prime_utr;Parent=MsG0380015618.01.T01
Chr3 three_prime_UTR 72601134 72601302 72601134 ID=MsG0380015618.01.T01:three_prime_utr;Parent=MsG0380015618.01.T01
Gene Sequence

>MsG0380015618.01.T01

ATGTTCGAAAAACCCTCACTCATTTTCATTCAACCAATCATGAACCGCCAAGTACTACCACCGTCTCCAAAAAACGCAACCACACTCAACCCCAAACTCTGGCGAGCTATCGCCGGCGCTGCCGTGCAAATCCCCTCCGTCAATTCTAGGGTTTACTACTTCCCTCAAGGTCACATGGACCAAGCTACTTCACTTCCGAACAATCTCTCACCTCTTCTTCTCTCTCGTCCCTACATTCTCTGCTCCGTCTCCGCCGTTCATTTCCTCGCCGATCCGAAAACCGATGAGGTTTTCGCTAAGCTTTTTCTTCAACCGTTGAATGATTTCACTGTTAATTTTCCACGGATTCCGGTGATTGAAGCTGACGACGGTGAGAGGATTTCTTCGTTTGCGAAGATTCTTACTCCTTCTGATGCGAACAACGGTGGTGGATTTTCTGTTCCGAGGTTTTGTGCTGATTCGATTTTTCCTCCGTTGGATTATAGTATGGATCCTCCGTTGCAGAATTTGTTGATTACTGATGTTCATGGTTTGACTTGGGAGTTTCGTCACATTTACCGTGGAACGCCGCGCCGGCATTTGTTGACCACCGGTTGGAGTAGGTTTGTGAACGCTAAGAAGCTTGTTGCTGGTGATTCCGTTGTTTTTATGAAGAATACTAGAGGTGCAATGTTCATCGGAATCCGTCGTGCTGTTCGATTAGTTCCGAATCGGAGTAGCGCCGGTGGCGGTGTTTGCTCCGATGTGTCGAGATTGTGTCTTCCGATCTGTGGAGTGAGAAGTAGGGTGGATGAAGAAGAGAAGCTGGTGGATGAGAAGGCGTTTTCGAGGCACGGGAAGGGGAAGTTGTCTCCGGTGGCGGTTGCGGAGGCGGCGGAAATGGCAGCACAGGGGATGGGGTTTGAAGTGGTGTATTATCCGAGAGCGGGGTGGTCGGATTTTGTGTTGAAAGCGGAGGTTGTGGATGCGGCGATGAGTGTTACTTGGTGTCCTGGAATGAGAATCAAAATGGCTGTGGAGACTGATGATTCTTCCAGGACTACTTGGTTTCAAGGTGTAGTATCTCAGGTTTCTGTTCCTGATCGTGGGGCTTGGAGAGGTTCACCTTGGCGTATGCTTCATATTACATGGGACGAACCTGAAGTGTTGCAAACTTCCAAGTGGGTCAGCCCTTGGCAGGTGGAACTTCTTTCTACTACACCTTCCCTTCATACGCCCTTTCCCCCATTGAAAAGGACTAGAGGGGTATCTGGGGTGTTAACTGATGGAGATGGAGACCCCTTTTCTATCACAGGGTTCACTAATTCAACAATGGGACAATTGAATCAACCATTGTTGAGTTACAGTACTTTTCCTGCTGGCATGCAGGGAGCCAGGCATGATCTATTTTCCGTTTCAAGTTTTTCCAACTTTCCAGGTGATAACTTCCGTCTTTGTATGGGTAACTCCTTTGGCAGCAACACAGTGCCGGGGTTAAAATCTTTTTCAACGGATCTAAACGTTGGCAGTTCTCACTCTGGTGATTTTTCACCAGAGAGCCAGAGTAGTTTGCCTTCCTTTGGCACAGATTTTGTTCGGAACTACAACTGCAACTCAATGAAACCCGGGCCTGTAACGTTTCAGCTATTTGGTGCAGTCATTCAGACAGAACAGCCCGTTGAAAGTGGTTCAAATGGTACTGTTAGCACAGGAGATGACAGCAGTAAGGGCTGCAACGAAACTGAAGGCATTAACAACCCTCTTGAGGATTCGACTTACTCAAAATTGCTCGACAGGCTTGATGGCCAGTGCCAAATAGCCTCTACAGTTGAGGCATGCTATCTGTGA
Protein sequence

>MsG0380015618.01.T01

MFEKPSLIFIQPIMNRQVLPPSPKNATTLNPKLWRAIAGAAVQIPSVNSRVYYFPQGHMDQATSLPNNLSPLLLSRPYILCSVSAVHFLADPKTDEVFAKLFLQPLNDFTVNFPRIPVIEADDGERISSFAKILTPSDANNGGGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTTGWSRFVNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRLVPNRSSAGGGVCSDVSRLCLPICGVRSRVDEEEKLVDEKAFSRHGKGKLSPVAVAEAAEMAAQGMGFEVVYYPRAGWSDFVLKAEVVDAAMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDRGAWRGSPWRMLHITWDEPEVLQTSKWVSPWQVELLSTTPSLHTPFPPLKRTRGVSGVLTDGDGDPFSITGFTNSTMGQLNQPLLSYSTFPAGMQGARHDLFSVSSFSNFPGDNFRLCMGNSFGSNTVPGLKSFSTDLNVGSSHSGDFSPESQSSLPSFGTDFVRNYNCNSMKPGPVTFQLFGAVIQTEQPVESGSNGTVSTGDDSSKGCNETEGINNPLEDSTYSKLLDRLDGQCQIASTVEACYL*