AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015843.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015843.01.T01 MTR_3g078550 98.097 473 9 0 1 473 1 473 0.0 952
MsG0380015843.01.T01 MTR_3g078550 98.073 467 9 0 7 473 37 503 0.0 939
MsG0380015843.01.T01 MTR_3g078490 92.505 467 35 0 7 473 67 533 0.0 871
MsG0380015843.01.T01 MTR_4g106510 85.011 467 70 0 7 473 37 503 0.0 795
MsG0380015843.01.T01 MTR_3g078490 92.459 305 23 0 7 311 37 341 0.0 550
MsG0380015843.01.T01 MTR_6g086300 42.217 469 256 6 2 464 42 501 1.11e-115 349
MsG0380015843.01.T01 MTR_6g086300 42.217 469 256 6 2 464 42 501 1.11e-115 349
MsG0380015843.01.T01 MTR_6g086340 41.703 458 256 5 9 464 51 499 8.47e-114 344
MsG0380015843.01.T01 MTR_8g064170 39.956 453 259 6 15 464 98 540 1.92e-111 340
MsG0380015843.01.T01 MTR_8g083530 40.000 470 265 7 2 464 43 502 6.35e-111 337
MsG0380015843.01.T01 MTR_4g107040 41.060 453 254 6 15 464 101 543 4.70e-110 336
MsG0380015843.01.T01 MTR_2g067660 41.706 422 241 2 34 455 98 514 1.03e-109 335
MsG0380015843.01.T01 MTR_3g078170 39.868 454 260 6 14 464 98 541 4.31e-108 331
MsG0380015843.01.T01 MTR_8g064170 37.748 453 237 7 15 464 98 508 5.20e-98 304
MsG0380015843.01.T01 MTR_8g083520 37.821 468 245 6 2 464 34 460 5.98e-98 302
MsG0380015843.01.T01 MTR_8g083520 38.278 418 219 4 48 464 1 380 1.88e-91 283
MsG0380015843.01.T01 MTR_3g078170 39.344 366 209 6 14 376 98 453 1.56e-81 260
MsG0380015843.01.T01 MTR_3g078170 39.769 347 196 6 14 357 98 434 2.42e-75 243
MsG0380015843.01.T01 MTR_3g078170 39.942 343 193 6 14 353 98 430 3.79e-75 243
MsG0380015843.01.T01 MTR_8g083530 39.297 313 175 6 2 307 43 347 1.36e-61 205
MsG0380015843.01.T01 MTR_1690s0010 37.801 291 177 3 36 325 63 350 8.74e-61 202
MsG0380015843.01.T01 MTR_4g131180 33.937 442 263 11 9 440 47 469 3.53e-59 202
MsG0380015843.01.T01 MTR_2g034160 28.964 473 314 8 7 469 78 538 5.07e-58 201
MsG0380015843.01.T01 MTR_1g014320 32.599 454 273 12 9 452 47 477 2.89e-57 197
MsG0380015843.01.T01 MTR_4g131180 33.890 419 253 9 9 420 47 448 1.22e-56 195
MsG0380015843.01.T01 MTR_2g042330 29.535 430 277 10 34 450 71 487 1.13e-49 177
MsG0380015843.01.T01 MTR_2g009750 29.655 435 279 9 36 457 67 487 3.48e-48 173
MsG0380015843.01.T01 MTR_2g009750 29.655 435 279 9 36 457 68 488 4.21e-48 173
MsG0380015843.01.T01 MTR_2g009750 29.587 436 279 9 36 457 68 489 4.89e-48 173
MsG0380015843.01.T01 MTR_4g093170 27.854 438 300 8 36 465 95 524 2.59e-47 171
MsG0380015843.01.T01 MTR_3g088150 31.856 361 231 7 100 455 97 447 1.63e-43 160
MsG0380015843.01.T01 MTR_1399s0020 30.387 362 194 6 108 464 38 346 2.51e-43 156
MsG0380015843.01.T01 MTR_8g076480 30.734 436 278 13 30 455 17 438 4.31e-42 156
MsG0380015843.01.T01 MTR_1g029840 30.471 361 236 7 100 455 95 445 6.58e-42 155
MsG0380015843.01.T01 MTR_1g029840 30.471 361 236 7 100 455 95 445 7.21e-42 155
MsG0380015843.01.T01 MTR_8g094600 29.977 427 277 10 38 455 85 498 2.70e-40 152
MsG0380015843.01.T01 MTR_1222s0010 33.434 332 207 6 69 398 52 371 8.07e-36 141
MsG0380015843.01.T01 MTR_2g097950 27.083 480 300 16 16 470 12 466 8.71e-36 139
MsG0380015843.01.T01 MTR_2g097950 26.105 475 276 15 16 470 12 431 2.79e-31 125
MsG0380015843.01.T01 MTR_1314s0010 30.460 348 224 7 121 457 1 341 1.15e-29 119
MsG0380015843.01.T01 MTR_4g065040 28.000 450 304 10 30 470 13 451 6.13e-29 119
MsG0380015843.01.T01 MTR_4g107940 26.557 305 190 11 114 399 187 476 9.48e-15 77.0
MsG0380015843.01.T01 MTR_4g107940 26.557 305 190 11 114 399 187 476 1.22e-14 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015843.01.T01 AT1G74920 78.065 465 102 0 7 471 37 501 0.0 790
MsG0380015843.01.T01 AT1G74920 77.826 460 102 0 12 471 37 496 0.0 780
MsG0380015843.01.T01 AT3G48170 76.874 467 108 0 7 473 37 503 0.0 774
MsG0380015843.01.T01 AT3G24503 44.323 458 245 5 9 464 51 500 6.45e-131 388
MsG0380015843.01.T01 AT3G48000 42.384 453 248 6 15 464 95 537 5.40e-116 351
MsG0380015843.01.T01 AT1G23800 40.177 453 258 6 15 464 91 533 6.69e-108 330
MsG0380015843.01.T01 AT1G79440 40.714 420 244 2 36 455 106 520 2.38e-100 311
MsG0380015843.01.T01 AT1G23800 41.216 296 163 5 15 307 91 378 1.86e-63 211
MsG0380015843.01.T01 AT3G66658 31.210 471 296 12 7 464 78 533 9.87e-62 211
MsG0380015843.01.T01 AT3G66658 31.210 471 296 12 7 464 78 533 2.20e-61 211
MsG0380015843.01.T01 AT2G24270 32.426 441 271 10 9 440 47 469 6.61e-57 196
MsG0380015843.01.T01 AT2G24270 32.426 441 271 10 9 440 47 469 6.61e-57 196
MsG0380015843.01.T01 AT2G24270 32.426 441 271 10 9 440 47 469 9.52e-57 196
MsG0380015843.01.T01 AT2G24270 32.426 441 271 10 9 440 87 509 2.04e-56 196
MsG0380015843.01.T01 AT1G54100 29.718 461 299 10 12 462 53 498 9.91e-53 186
MsG0380015843.01.T01 AT1G54100 29.718 461 299 10 12 462 53 498 9.91e-53 186
MsG0380015843.01.T01 AT2G14170 29.095 464 303 10 9 464 36 481 1.37e-48 174
MsG0380015843.01.T01 AT2G14170 29.095 464 303 10 9 464 145 590 7.49e-48 174
MsG0380015843.01.T01 AT2G14170 28.959 442 296 8 9 445 145 573 8.74e-46 168
MsG0380015843.01.T01 AT1G44170 30.748 361 235 7 100 455 28 378 1.65e-44 161
MsG0380015843.01.T01 AT1G44170 30.748 361 235 7 100 455 91 441 4.02e-44 162
MsG0380015843.01.T01 AT1G44170 30.748 361 235 7 100 455 91 441 4.02e-44 162
MsG0380015843.01.T01 AT4G36250 26.638 458 302 12 12 455 3 440 2.51e-34 134
MsG0380015843.01.T01 AT4G34240 29.466 431 285 10 31 455 72 489 6.77e-33 131
MsG0380015843.01.T01 AT4G34240 28.935 432 284 10 30 455 90 504 1.00e-32 131
MsG0380015843.01.T01 AT4G34240 31.092 357 229 9 106 455 16 362 5.23e-32 127
MsG0380015843.01.T01 AT4G34240 30.868 311 201 8 31 337 87 387 7.53e-20 91.7

Find 122 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATCTCTACCTTTGTTTC+TGG 0.123105 3:-75796493 None:intergenic
GGCATTAAACGTAGCGGTTT+TGG 0.201802 3:+75799797 MsG0380015843.01.T01:CDS
TTTAATATTGTTACCGGATT+AGG 0.224280 3:+75797589 MsG0380015843.01.T01:CDS
CTTCAGAACATGGCTCTTAA+AGG 0.270910 3:-75797183 None:intergenic
AGAGATTGGTCCACTGCTTC+TGG 0.281087 3:+75796507 MsG0380015843.01.T01:CDS
CTGAAGTCTGGCATCGAATA+AGG 0.289540 3:+75800082 MsG0380015843.01.T01:three_prime_UTR
ATCATATAGGATGATGTTAT+TGG 0.292168 3:+75797083 MsG0380015843.01.T01:intron
TAGGAACTATCCTCTCTTAA+TGG 0.308920 3:+75797356 MsG0380015843.01.T01:intron
GGCTGAAAATATCAAAATTT+CGG 0.313683 3:+75798540 MsG0380015843.01.T01:CDS
TCTACCTTTGTTTCTGGAAA+TGG 0.315025 3:-75796487 None:intergenic
GTATTTCACAGCTATGGCTT+GGG 0.324222 3:+75799559 MsG0380015843.01.T01:intron
GTTGCTGAATGGACCATCTT+TGG 0.343607 3:+75798199 MsG0380015843.01.T01:intron
GCACAACCAGCAGCTAGAGC+TGG 0.348346 3:-75797396 None:intergenic
TAAATTTGATTTCTGAAGTC+TGG 0.364661 3:+75800070 MsG0380015843.01.T01:three_prime_UTR
TTGTGAATAAACTTGTGAAA+TGG 0.372426 3:+75798518 MsG0380015843.01.T01:CDS
ACCTGTGCTTCACTGACAAT+AGG 0.380793 3:-75798592 None:intergenic
AAGATGTGAGCGCGTATCTA+AGG 0.388834 3:+75799609 MsG0380015843.01.T01:CDS
AATATTGAAGCCGTCTGAAT+TGG 0.395523 3:+75797422 MsG0380015843.01.T01:CDS
CCACCAAGCTCTAGTGAAAC+AGG 0.398736 3:-75797958 None:intergenic
TTAAACTTACATGCACAATA+AGG 0.400421 3:-75798264 None:intergenic
GGATATACCAGCTGCTACTA+AGG 0.400740 3:+75796428 MsG0380015843.01.T01:CDS
GGTATTTCACAGCTATGGCT+TGG 0.402032 3:+75799558 MsG0380015843.01.T01:intron
TTTAGGACCTGTTTGGAGTT+GGG 0.403452 3:+75797529 MsG0380015843.01.T01:intron
ATCCATTGGAAGAAGGTTGC+AGG 0.404314 3:+75798563 MsG0380015843.01.T01:CDS
TTTACCGGTAGCTCTGCAAC+TGG 0.405109 3:+75797815 MsG0380015843.01.T01:CDS
TGAGGATGTTGACCTTGATA+AGG 0.409876 3:+75798002 MsG0380015843.01.T01:CDS
ATTAATGCAACAACACCAAT+AGG 0.410007 3:-75797209 None:intergenic
ATTCGATAGATTTCCTTTAC+CGG 0.420727 3:+75797800 MsG0380015843.01.T01:intron
ATCCCATCCCGATGTTGATA+AGG 0.425124 3:+75797636 MsG0380015843.01.T01:CDS
CCAGAAACAAAGGTAGAGAT+TGG 0.430993 3:+75796493 MsG0380015843.01.T01:CDS
CAGCCTGTTTCACTAGAGCT+TGG 0.432951 3:+75797955 MsG0380015843.01.T01:intron
GGATGAAGCACTAGCGGATC+TGG 0.434432 3:+75796977 MsG0380015843.01.T01:CDS
TTCAATGCAGCATTTAAAGA+AGG 0.434642 3:+75799317 MsG0380015843.01.T01:intron
TATCAAAATTTCGGATCCAT+TGG 0.441214 3:+75798549 MsG0380015843.01.T01:CDS
TGTGAATAAACTTGTGAAAT+GGG 0.447654 3:+75798519 MsG0380015843.01.T01:CDS
CTCTTCAAGCTGGAATTGTA+TGG 0.448311 3:+75799732 MsG0380015843.01.T01:CDS
GTTATTAAACAGTTGCTGAA+TGG 0.450207 3:+75798188 MsG0380015843.01.T01:intron
GGCTCCTGTATCCCTTCCTA+TGG 0.450658 3:+75797157 MsG0380015843.01.T01:CDS
TGCTGGGCTTGCTGAAGGGT+TGG 0.452991 3:+75797121 MsG0380015843.01.T01:CDS
TTATTGTTATCTTAAGTTGT+TGG 0.457855 3:+75800126 MsG0380015843.01.T01:three_prime_UTR
GTTAACTATCACAGCTTTGA+AGG 0.463549 3:-75800032 None:intergenic
AAATTTATCATCACTTTACA+TGG 0.464511 3:-75800054 None:intergenic
TTGGAAGAAGGTTGCAGGCT+AGG 0.469097 3:+75798568 MsG0380015843.01.T01:CDS
GAGGATGTTGACCTTGATAA+GGG 0.470972 3:+75798003 MsG0380015843.01.T01:CDS
AAGTTTATTCACAAATTCTA+CGG 0.471124 3:-75798509 None:intergenic
ACCAGCTTCATGGCCTAATC+CGG 0.472397 3:-75797602 None:intergenic
ATTTCGGATCCATTGGAAGA+AGG 0.477666 3:+75798556 MsG0380015843.01.T01:CDS
TACTATGCTGGGCTTGCTGA+AGG 0.480607 3:+75797116 MsG0380015843.01.T01:CDS
CCCTATTGTCAGTGAAGCAC+AGG 0.482906 3:+75798591 MsG0380015843.01.T01:CDS
ATTCTGCAGGCTCTTCAAGC+TGG 0.483750 3:+75799722 MsG0380015843.01.T01:intron
CCTGTGCTTCACTGACAATA+GGG 0.485460 3:-75798591 None:intergenic
GTTCAAACCTTATCAACATC+GGG 0.486154 3:-75797643 None:intergenic
AGTTGCAGAGCTACCGGTAA+AGG 0.487812 3:-75797813 None:intergenic
GTATCCATAGGAAGGGATAC+AGG 0.493292 3:-75797161 None:intergenic
TATTTCGCCCAACTCCAAAC+AGG 0.497837 3:-75797536 None:intergenic
CATGTTCTGAAGGAGCCTAT+TGG 0.502581 3:+75797194 MsG0380015843.01.T01:CDS
CGTAAAGAAGCAGCCAAAGA+TGG 0.503081 3:-75798212 None:intergenic
GTCACATCGGTTACGATGGT+TGG 0.503397 3:-75799354 None:intergenic
CAAGCTTCATTCAAGCTCCA+TGG 0.506934 3:+75799771 MsG0380015843.01.T01:CDS
GCTTCTGGTTCTGTTCGTGC+TGG 0.509086 3:+75796522 MsG0380015843.01.T01:CDS
AAAGAAGTTGGCCTTCCTCC+TGG 0.512329 3:+75797562 MsG0380015843.01.T01:CDS
CCTGTTTCACTAGAGCTTGG+TGG 0.513971 3:+75797958 MsG0380015843.01.T01:CDS
TTTGGCTGCTTCTTTACGAA+TGG 0.514086 3:+75798217 MsG0380015843.01.T01:CDS
AAGCTTCATTCAAGCTCCAT+GGG 0.519280 3:+75799772 MsG0380015843.01.T01:CDS
AACCTTATCAACATCGGGAT+GGG 0.520697 3:-75797638 None:intergenic
ACATCTTCCTTAGTAGCAGC+TGG 0.522852 3:-75796435 None:intergenic
ATACATATCTGATGAGCAGT+GGG 0.523721 3:+75799995 MsG0380015843.01.T01:CDS
ATCGCTCCAGCTCTAGCTGC+TGG 0.524125 3:+75797390 MsG0380015843.01.T01:CDS
AGGGTTGGATGCAAAGCAAA+AGG 0.525153 3:+75797136 MsG0380015843.01.T01:CDS
TTGGTCGCGAATTAGGAGAA+TGG 0.527821 3:+75799816 MsG0380015843.01.T01:CDS
GCTCCCAGTTGCAGAGCTAC+CGG 0.528239 3:-75797819 None:intergenic
TCTTCGAGCAATTGCTGCAA+AGG 0.528718 3:+75796548 MsG0380015843.01.T01:CDS
ATCCTCTCTTAATGGCGACT+TGG 0.533379 3:+75797364 MsG0380015843.01.T01:CDS
CTTTAAGAGCCATGTTCTGA+AGG 0.535553 3:+75797184 MsG0380015843.01.T01:CDS
TATTTCACAGCTATGGCTTG+GGG 0.535756 3:+75799560 MsG0380015843.01.T01:intron
AATAGATTGTGGAAAGCCAC+TGG 0.537548 3:+75796956 MsG0380015843.01.T01:CDS
TATCTGATGAGCAGTGGGGC+TGG 0.538103 3:+75800000 MsG0380015843.01.T01:CDS
AACTTAAGATAACAATAACT+TGG 0.542633 3:-75800121 None:intergenic
TTGTTGCATTAATTACTCCA+TGG 0.543900 3:+75797219 MsG0380015843.01.T01:CDS
GGCGAAATATGCAAAGAAGT+TGG 0.547648 3:+75797550 MsG0380015843.01.T01:CDS
TCAATGCAGCATTTAAAGAA+GGG 0.549849 3:+75799318 MsG0380015843.01.T01:intron
TCTTAAAGGTATCCATAGGA+AGG 0.554905 3:-75797169 None:intergenic
AGGCACACCAACCCTTATCA+AGG 0.555964 3:-75798014 None:intergenic
AGCCTGCAACCTTCTTCCAA+TGG 0.556310 3:-75798565 None:intergenic
TTAACTATCACAGCTTTGAA+GGG 0.557676 3:-75800031 None:intergenic
TAGATCGATTGCTTCTTCCT+CGG 0.561075 3:-75799442 None:intergenic
ATCTCAACGGCTAAGAGTGA+AGG 0.561409 3:+75799183 MsG0380015843.01.T01:CDS
AGCTGCGGCACAGCTAATCA+AGG 0.562042 3:+75797853 MsG0380015843.01.T01:CDS
ACCGGATTAGGCCATGAAGC+TGG 0.566934 3:+75797601 MsG0380015843.01.T01:CDS
CATGGAGCTTGAATGAAGCT+TGG 0.568220 3:-75799770 None:intergenic
TCCGCTAGTGCTTCATCCAG+TGG 0.569359 3:-75796972 None:intergenic
CAATAGGCTCCTTCAGAACA+TGG 0.574620 3:-75797193 None:intergenic
ACTATGCTGGGCTTGCTGAA+GGG 0.576322 3:+75797117 MsG0380015843.01.T01:CDS
AGTTCAAACCTTATCAACAT+CGG 0.576734 3:-75797644 None:intergenic
GACTGGTGGGCGTCGCCCAG+AGG 0.577345 3:+75799218 MsG0380015843.01.T01:CDS
AAGCTTGAATCAATAGATTG+TGG 0.586574 3:+75796945 MsG0380015843.01.T01:CDS
AAACCTTATCAACATCGGGA+TGG 0.586805 3:-75797639 None:intergenic
TTCCAAGTCGCCATTAAGAG+AGG 0.587691 3:-75797366 None:intergenic
TAACTATCACAGCTTTGAAG+GGG 0.590762 3:-75800030 None:intergenic
TGGCTCTTAAAGGTATCCAT+AGG 0.592547 3:-75797173 None:intergenic
TGAATGGTTGACACAAATGC+AGG 0.604285 3:+75796405 None:intergenic
TTCATTCAAGCTCCATGGGG+AGG 0.608597 3:+75799776 MsG0380015843.01.T01:CDS
CTACGTTTAATGCCTCCCCA+TGG 0.609880 3:-75799788 None:intergenic
TACACAGATGCCAATTCAGA+CGG 0.614415 3:-75797432 None:intergenic
AGAGCCATTTCCAGAAACAA+AGG 0.615015 3:+75796483 MsG0380015843.01.T01:CDS
GCCACTGGATGAAGCACTAG+CGG 0.621235 3:+75796971 MsG0380015843.01.T01:CDS
TTCTCTCCACATTTGCATCG+AGG 0.623103 3:-75799379 None:intergenic
GATACATATCTGATGAGCAG+TGG 0.625206 3:+75799994 MsG0380015843.01.T01:CDS
TTACCGGTAGCTCTGCAACT+GGG 0.626292 3:+75797816 MsG0380015843.01.T01:CDS
CTTAAAGGTATCCATAGGAA+GGG 0.626729 3:-75797168 None:intergenic
GGTAGTCACATCGGTTACGA+TGG 0.633466 3:-75799358 None:intergenic
ACGAACAGAACCAGAAGCAG+TGG 0.650272 3:-75796517 None:intergenic
TTGCATCGAGGTAGTCACAT+CGG 0.652701 3:-75799367 None:intergenic
GAATGGTTGACACAAATGCA+GGG 0.666140 3:+75796406 None:intergenic
GAGCAAGATTATGACAGCTG+CGG 0.668052 3:+75797838 MsG0380015843.01.T01:CDS
TGACTACCTCGATGCAAATG+TGG 0.681016 3:+75799373 MsG0380015843.01.T01:CDS
TGGGGAGGCATTAAACGTAG+CGG 0.693952 3:+75799791 MsG0380015843.01.T01:CDS
TAACATCAATGAAAGCAACA+TGG 0.708034 3:-75800207 None:intergenic
AGCTTCATTCAAGCTCCATG+GGG 0.709625 3:+75799773 MsG0380015843.01.T01:CDS
GCATCGAATAAGGTGCGATG+TGG 0.714161 3:+75800092 MsG0380015843.01.T01:three_prime_UTR
AATGGTTGACACAAATGCAG+GGG 0.745276 3:+75796407 None:intergenic
TACATATCTGATGAGCAGTG+GGG 0.771154 3:+75799996 MsG0380015843.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAATTAATAAACTATAAA+CGG - Chr3:75798163-75798182 None:intergenic 10.0%
!!! AACTGATTTTATTATATATT+AGG + Chr3:75797337-75797356 MsG0380015843.01.T01:intron 10.0%
!!! AATTTTCTTATTGTATAAAT+CGG + Chr3:75798356-75798375 MsG0380015843.01.T01:intron 10.0%
!!! ACAATTCAATATCTAAAATT+TGG + Chr3:75799125-75799144 MsG0380015843.01.T01:intron 15.0%
!!! CAATTCAATATCTAAAATTT+GGG + Chr3:75799126-75799145 MsG0380015843.01.T01:intron 15.0%
!!! TTGATTTTTTTTCTAACTAA+TGG + Chr3:75799679-75799698 MsG0380015843.01.T01:intron 15.0%
!! AAAAATCTTATGAGAGTAAA+TGG - Chr3:75798763-75798782 None:intergenic 20.0%
!! AAACAAAAAAGAAAGAAGTA+CGG - Chr3:75797033-75797052 None:intergenic 20.0%
!! AAATTTATCATCACTTTACA+TGG - Chr3:75800057-75800076 None:intergenic 20.0%
!! AACATGTATTATTGATGAAA+TGG - Chr3:75798308-75798327 None:intergenic 20.0%
!! AACTTAAGATAACAATAACT+TGG - Chr3:75800124-75800143 None:intergenic 20.0%
!! AAGTTTATTCACAAATTCTA+CGG - Chr3:75798512-75798531 None:intergenic 20.0%
!! ACATGTATTATTGATGAAAT+GGG - Chr3:75798307-75798326 None:intergenic 20.0%
!! TCACATTTGAAAATATTAGA+GGG - Chr3:75799888-75799907 None:intergenic 20.0%
!! TTCACATTTGAAAATATTAG+AGG - Chr3:75799889-75799908 None:intergenic 20.0%
!!! ACTACTATATGTTTTCATTT+TGG - Chr3:75798961-75798980 None:intergenic 20.0%
!!! AGTATTGAATTTTATCTCAA+CGG + Chr3:75799170-75799189 MsG0380015843.01.T01:CDS 20.0%
!!! ATTTACTCTCATAAGATTTT+TGG + Chr3:75798762-75798781 MsG0380015843.01.T01:intron 20.0%
!!! CAAATGATTTTGTTCATTAA+TGG + Chr3:75797676-75797695 MsG0380015843.01.T01:intron 20.0%
!!! CTTAATGTTTTTAAATTGCA+CGG - Chr3:75799072-75799091 None:intergenic 20.0%
!!! TTATTGTTATCTTAAGTTGT+TGG + Chr3:75800126-75800145 MsG0380015843.01.T01:three_prime_UTR 20.0%
!!! TTCAATTTCATGGATTATTT+TGG - Chr3:75796754-75796773 None:intergenic 20.0%
!!! TTTTAGATATTGAATTGTCT+TGG - Chr3:75799123-75799142 None:intergenic 20.0%
!!! TTTTTGTTTTTTTGCTTACT+TGG + Chr3:75797044-75797063 MsG0380015843.01.T01:intron 20.0%
! AATATTAGAGGGAGAATTAA+AGG - Chr3:75799877-75799896 None:intergenic 25.0%
! ATCATATAGGATGATGTTAT+TGG + Chr3:75797083-75797102 MsG0380015843.01.T01:intron 25.0%
! ATTCAGCAACTGTTTAATAA+CGG - Chr3:75798189-75798208 None:intergenic 25.0%
! ATTTCAGTAACTAAAACTGT+TGG + Chr3:75796805-75796824 MsG0380015843.01.T01:intron 25.0%
! CAAATTAGACATATTTGAGA+AGG - Chr3:75798037-75798056 None:intergenic 25.0%
! CATGTATTATTGATGAAATG+GGG - Chr3:75798306-75798325 None:intergenic 25.0%
! GGCTGAAAATATCAAAATTT+CGG + Chr3:75798540-75798559 MsG0380015843.01.T01:CDS 25.0%
! GTAACAATATTAAAAACACC+AGG - Chr3:75797583-75797602 None:intergenic 25.0%
! TAAAACACTTATACTGTTTC+AGG + Chr3:75798477-75798496 MsG0380015843.01.T01:intron 25.0%
! TAAAGTCATGCATTAGTTAT+TGG + Chr3:75798677-75798696 MsG0380015843.01.T01:intron 25.0%
! TCTCAAATATGTCTAATTTG+TGG + Chr3:75798037-75798056 MsG0380015843.01.T01:intron 25.0%
! TGTGAATAAACTTGTGAAAT+GGG + Chr3:75798519-75798538 MsG0380015843.01.T01:CDS 25.0%
! TTAAACTTACATGCACAATA+AGG - Chr3:75798267-75798286 None:intergenic 25.0%
! TTATCGTATCTATATGCAAA+AGG + Chr3:75798807-75798826 MsG0380015843.01.T01:intron 25.0%
! TTCTTATTGTATAAATCGGA+GGG + Chr3:75798360-75798379 MsG0380015843.01.T01:intron 25.0%
! TTGTGAATAAACTTGTGAAA+TGG + Chr3:75798518-75798537 MsG0380015843.01.T01:CDS 25.0%
! TTTAATATTGTTACCGGATT+AGG + Chr3:75797589-75797608 MsG0380015843.01.T01:CDS 25.0%
! TTTCAGTAACTAAAACTGTT+GGG + Chr3:75796806-75796825 MsG0380015843.01.T01:intron 25.0%
! TTTCTTATTGTATAAATCGG+AGG + Chr3:75798359-75798378 MsG0380015843.01.T01:intron 25.0%
!! AAAAGGAGGTTTTTAATCAA+TGG + Chr3:75798824-75798843 MsG0380015843.01.T01:intron 25.0%
!! ACTTATATTGATTATTCTGC+AGG + Chr3:75799709-75799728 MsG0380015843.01.T01:intron 25.0%
!! ATCTACGATTTTCAATTTCA+TGG - Chr3:75796764-75796783 None:intergenic 25.0%
!! GTCTTATCGTTTACAATTTT+AGG + Chr3:75797512-75797531 MsG0380015843.01.T01:intron 25.0%
!! TCTTTTATGATAGTATATCC+TGG - Chr3:75799645-75799664 None:intergenic 25.0%
!! TTTCTTGCAATGTCAATTTT+TGG + Chr3:75798087-75798106 MsG0380015843.01.T01:intron 25.0%
!!! GAGATTTTAAGAAACAAGAT+TGG - Chr3:75799847-75799866 None:intergenic 25.0%
!!! GGTGTTTTTAATATTGTTAC+CGG + Chr3:75797583-75797602 MsG0380015843.01.T01:CDS 25.0%
!!! TAAATTTGATTTCTGAAGTC+TGG + Chr3:75800070-75800089 MsG0380015843.01.T01:three_prime_UTR 25.0%
!!! TTCTATTTTTGCTCTTGATA+TGG + Chr3:75796583-75796602 MsG0380015843.01.T01:intron 25.0%
!!! TTTAATCAATGGCTTTAGTT+TGG + Chr3:75798835-75798854 MsG0380015843.01.T01:intron 25.0%
AACTATAAGAAGCTAGATCT+TGG + Chr3:75797704-75797723 MsG0380015843.01.T01:intron 30.0%
AAGCTTGAATCAATAGATTG+TGG + Chr3:75796945-75796964 MsG0380015843.01.T01:CDS 30.0%
AATTTGGTATTTCACAGCTA+TGG + Chr3:75799553-75799572 MsG0380015843.01.T01:intron 30.0%
ACAATATTAAAAACACCAGG+AGG - Chr3:75797580-75797599 None:intergenic 30.0%
ACATCCTCAAAAACAACTAT+CGG - Chr3:75797991-75798010 None:intergenic 30.0%
ACTGAGAAAAAGAATGAACT+AGG + Chr3:75796921-75796940 MsG0380015843.01.T01:CDS 30.0%
AGTTCAAACCTTATCAACAT+CGG - Chr3:75797647-75797666 None:intergenic 30.0%
ATCAAAGCCAATAATAGACT+TGG - Chr3:75798436-75798455 None:intergenic 30.0%
ATTAATGCAACAACACCAAT+AGG - Chr3:75797212-75797231 None:intergenic 30.0%
ATTCGATAGATTTCCTTTAC+CGG + Chr3:75797800-75797819 MsG0380015843.01.T01:intron 30.0%
GTTATTAAACAGTTGCTGAA+TGG + Chr3:75798188-75798207 MsG0380015843.01.T01:intron 30.0%
TAACATCAATGAAAGCAACA+TGG - Chr3:75800210-75800229 None:intergenic 30.0%
TATCAAAATTTCGGATCCAT+TGG + Chr3:75798549-75798568 MsG0380015843.01.T01:CDS 30.0%
TATGAGAGTAAATGGAACAA+AGG - Chr3:75798755-75798774 None:intergenic 30.0%
TATTGAATTGTCTTGGTTCA+AGG - Chr3:75799116-75799135 None:intergenic 30.0%
TCAATGCAGCATTTAAAGAA+GGG + Chr3:75799318-75799337 MsG0380015843.01.T01:intron 30.0%
TCTGGTAATTATTATTCGAC+TGG + Chr3:75796995-75797014 MsG0380015843.01.T01:intron 30.0%
TTCAATGCAGCATTTAAAGA+AGG + Chr3:75799317-75799336 MsG0380015843.01.T01:intron 30.0%
TTGTTGCATTAATTACTCCA+TGG + Chr3:75797219-75797238 MsG0380015843.01.T01:CDS 30.0%
! CCAATAATAGACTTGGTAAA+AGG - Chr3:75798429-75798448 None:intergenic 30.0%
! CCTTTTACCAAGTCTATTAT+TGG + Chr3:75798426-75798445 MsG0380015843.01.T01:intron 30.0%
! TGCTCTTGATATGGATTAAA+GGG + Chr3:75796592-75796611 MsG0380015843.01.T01:intron 30.0%
! TTGCTCTTGATATGGATTAA+AGG + Chr3:75796591-75796610 MsG0380015843.01.T01:intron 30.0%
!! AATGTTTTTACAGAGAGTAC+AGG - Chr3:75799417-75799436 None:intergenic 30.0%
!! TTAACTATCACAGCTTTGAA+GGG - Chr3:75800034-75800053 None:intergenic 30.0%
!!! AGGGAGAATTAAAGGTATTT+TGG - Chr3:75799869-75799888 None:intergenic 30.0%
!!! TGTTGTTGTTTTGTCATTCA+GGG + Chr3:75799935-75799954 MsG0380015843.01.T01:intron 30.0%
!!! TTACAATTTTAGGACCTGTT+TGG + Chr3:75797522-75797541 MsG0380015843.01.T01:intron 30.0%
!!! TTGTTGTTGTTTTGTCATTC+AGG + Chr3:75799934-75799953 MsG0380015843.01.T01:intron 30.0%
AATATTGAAGCCGTCTGAAT+TGG + Chr3:75797422-75797441 MsG0380015843.01.T01:CDS 35.0%
AGTCATGCATTAGTTATTGG+TGG + Chr3:75798680-75798699 MsG0380015843.01.T01:intron 35.0%
ATACATATCTGATGAGCAGT+GGG + Chr3:75799995-75800014 MsG0380015843.01.T01:CDS 35.0%
ATCTGCTTTGATGAGCTATT+TGG + Chr3:75797295-75797314 MsG0380015843.01.T01:intron 35.0%
CATCCTCAAAAACAACTATC+GGG - Chr3:75797990-75798009 None:intergenic 35.0%
GAAGAAAAAAGCAGATACCA+TGG - Chr3:75797239-75797258 None:intergenic 35.0%
GCTGTGAAATACCAAATTTG+TGG - Chr3:75799551-75799570 None:intergenic 35.0%
GTGAGAATTGGAAAGGAAAA+AGG - Chr3:75796896-75796915 None:intergenic 35.0%
GTTACTGAAATTGTCTCGAA+TGG - Chr3:75796796-75796815 None:intergenic 35.0%
GTTATCTGTGAGAATTGGAA+AGG - Chr3:75796903-75796922 None:intergenic 35.0%
GTTCAAACCTTATCAACATC+GGG - Chr3:75797646-75797665 None:intergenic 35.0%
TAGGAACTATCCTCTCTTAA+TGG + Chr3:75797356-75797375 MsG0380015843.01.T01:intron 35.0%
TATATGATCAAACCACAGCA+GGG - Chr3:75797071-75797090 None:intergenic 35.0%
TATTAAAAACACCAGGAGGA+AGG - Chr3:75797576-75797595 None:intergenic 35.0%
TCCACAAGTGAAGAAAAAAG+TGG - Chr3:75799516-75799535 None:intergenic 35.0%
TCGTATCTATATGCAAAAGG+AGG + Chr3:75798810-75798829 MsG0380015843.01.T01:intron 35.0%
TCTCAGTTATCTGTGAGAAT+TGG - Chr3:75796908-75796927 None:intergenic 35.0%
TGATGTCAAAGCCACAAATT+TGG + Chr3:75799537-75799556 MsG0380015843.01.T01:intron 35.0%
TGCATGACTTTAACAACAAG+TGG - Chr3:75798669-75798688 None:intergenic 35.0%
TGGTAAGTTAAGCACATATC+TGG - Chr3:75798649-75798668 None:intergenic 35.0%
TGTAAAAACATTTAGCACCG+AGG + Chr3:75799425-75799444 MsG0380015843.01.T01:CDS 35.0%
TTTGCGTAGTTACCATGATT+TGG + Chr3:75799034-75799053 MsG0380015843.01.T01:intron 35.0%
! ATGTGGAGAGAAGAAGTTTT+TGG + Chr3:75799390-75799409 MsG0380015843.01.T01:CDS 35.0%
! CATGCTAGCAGTAGATTTTT+CGG - Chr3:75798886-75798905 None:intergenic 35.0%
! GAAATGAGTGTTGCACAATT+TGG + Chr3:75796710-75796729 MsG0380015843.01.T01:intron 35.0%
! GTTAACTATCACAGCTTTGA+AGG - Chr3:75800035-75800054 None:intergenic 35.0%
! TTGGATAACAGAGAAAGCAT+TGG - Chr3:75798942-75798961 None:intergenic 35.0%
! TTGGTTTAAGACGTTGTTTG+AGG + Chr3:75798781-75798800 MsG0380015843.01.T01:intron 35.0%
!! CTTAAAGGTATCCATAGGAA+GGG - Chr3:75797171-75797190 None:intergenic 35.0%
!! CTTCTATTTCTACCAGTCTA+AGG - Chr3:75798395-75798414 None:intergenic 35.0%
!! TAACTATCACAGCTTTGAAG+GGG - Chr3:75800033-75800052 None:intergenic 35.0%
!! TCTACCTTTGTTTCTGGAAA+TGG - Chr3:75796490-75796509 None:intergenic 35.0%
!! TCTTAAAGGTATCCATAGGA+AGG - Chr3:75797172-75797191 None:intergenic 35.0%
!! TTTTTGGTATCCGTAACCTA+TGG + Chr3:75798103-75798122 MsG0380015843.01.T01:intron 35.0%
!!! ACCACTTTTTTCTTCACTTG+TGG + Chr3:75799512-75799531 MsG0380015843.01.T01:intron 35.0%
!!! GTTGTTGTTTTGTCATTCAG+GGG + Chr3:75799936-75799955 MsG0380015843.01.T01:intron 35.0%
!!! GTTGTTTTGAGTACTATGCT+GGG + Chr3:75797105-75797124 MsG0380015843.01.T01:CDS 35.0%
AAACCTTATCAACATCGGGA+TGG - Chr3:75797642-75797661 None:intergenic 40.0%
AACCTTATCAACATCGGGAT+GGG - Chr3:75797641-75797660 None:intergenic 40.0%
AAGCTTCATTCAAGCTCCAT+GGG + Chr3:75799772-75799791 MsG0380015843.01.T01:CDS 40.0%
AATAGATTGTGGAAAGCCAC+TGG + Chr3:75796956-75796975 MsG0380015843.01.T01:CDS 40.0%
AGAGCCATTTCCAGAAACAA+AGG + Chr3:75796483-75796502 MsG0380015843.01.T01:CDS 40.0%
ATGTTGACCTTGATAAGGGT+TGG + Chr3:75798007-75798026 MsG0380015843.01.T01:intron 40.0%
ATTGGTGGAGAGATTGAAAG+CGG + Chr3:75798695-75798714 MsG0380015843.01.T01:intron 40.0%
ATTTCGGATCCATTGGAAGA+AGG + Chr3:75798556-75798575 MsG0380015843.01.T01:CDS 40.0%
CCAGAAACAAAGGTAGAGAT+TGG + Chr3:75796493-75796512 MsG0380015843.01.T01:CDS 40.0%
CGAAAAATCTACTGCTAGCA+TGG + Chr3:75798884-75798903 MsG0380015843.01.T01:intron 40.0%
CTATATGATCAAACCACAGC+AGG - Chr3:75797072-75797091 None:intergenic 40.0%
CTATCGAATAATGCGCACAA+TGG - Chr3:75797789-75797808 None:intergenic 40.0%
CTCTTCAAGCTGGAATTGTA+TGG + Chr3:75799732-75799751 MsG0380015843.01.T01:CDS 40.0%
CTGCTGTGGTTTGATCATAT+AGG + Chr3:75797070-75797089 MsG0380015843.01.T01:intron 40.0%
CTTCAGAACATGGCTCTTAA+AGG - Chr3:75797186-75797205 None:intergenic 40.0%
GAGGATGTTGACCTTGATAA+GGG + Chr3:75798003-75798022 MsG0380015843.01.T01:CDS 40.0%
GATACATATCTGATGAGCAG+TGG + Chr3:75799994-75800013 MsG0380015843.01.T01:CDS 40.0%
GGCGAAATATGCAAAGAAGT+TGG + Chr3:75797550-75797569 MsG0380015843.01.T01:CDS 40.0%
GTATTTCACAGCTATGGCTT+GGG + Chr3:75799559-75799578 MsG0380015843.01.T01:intron 40.0%
TACACAGATGCCAATTCAGA+CGG - Chr3:75797435-75797454 None:intergenic 40.0%
TACATATCTGATGAGCAGTG+GGG + Chr3:75799996-75800015 MsG0380015843.01.T01:CDS 40.0%
TAGATCGATTGCTTCTTCCT+CGG - Chr3:75799445-75799464 None:intergenic 40.0%
TATTTCACAGCTATGGCTTG+GGG + Chr3:75799560-75799579 MsG0380015843.01.T01:intron 40.0%
TCAGAAAGACAGCCAAATCA+TGG - Chr3:75799049-75799068 None:intergenic 40.0%
TCTACCAGTCTAAGGAAATC+TGG - Chr3:75798387-75798406 None:intergenic 40.0%
TGAGGATGTTGACCTTGATA+AGG + Chr3:75798002-75798021 MsG0380015843.01.T01:CDS 40.0%
TGCTTTGATGAGCTATTTGG+TGG + Chr3:75797298-75797317 MsG0380015843.01.T01:intron 40.0%
TGTATGTCTTGAGACCTGAT+TGG + Chr3:75796867-75796886 MsG0380015843.01.T01:intron 40.0%
TTTGGCTGCTTCTTTACGAA+TGG + Chr3:75798217-75798236 MsG0380015843.01.T01:CDS 40.0%
! ATCTAAGGTGAGAATAGTCC+AGG + Chr3:75799624-75799643 MsG0380015843.01.T01:intron 40.0%
! CCAATCTCTACCTTTGTTTC+TGG - Chr3:75796496-75796515 None:intergenic 40.0%
! CGGCATATGAGCAAATGTTT+TGG - Chr3:75798143-75798162 None:intergenic 40.0%
! CTTTAAGAGCCATGTTCTGA+AGG + Chr3:75797184-75797203 MsG0380015843.01.T01:CDS 40.0%
! GAGGGTATAATCATACCTCT+GGG - Chr3:75799236-75799255 None:intergenic 40.0%
! TTTAGGACCTGTTTGGAGTT+GGG + Chr3:75797529-75797548 MsG0380015843.01.T01:intron 40.0%
! TTTTAGCAGCATCAACAGCA+AGG - Chr3:75796464-75796483 None:intergenic 40.0%
!! GAAGGTGCAACAATTTTGAC+TGG + Chr3:75799201-75799220 MsG0380015843.01.T01:CDS 40.0%
!! TGGCTCTTAAAGGTATCCAT+AGG - Chr3:75797176-75797195 None:intergenic 40.0%
!!! GGTTGTTTTGAGTACTATGC+TGG + Chr3:75797104-75797123 MsG0380015843.01.T01:CDS 40.0%
!!! GTGCAACAATTTTGACTGGT+GGG + Chr3:75799205-75799224 MsG0380015843.01.T01:CDS 40.0%
!!! TTTTAGGACCTGTTTGGAGT+TGG + Chr3:75797528-75797547 MsG0380015843.01.T01:intron 40.0%
AAGATGTGAGCGCGTATCTA+AGG + Chr3:75799609-75799628 MsG0380015843.01.T01:CDS 45.0%
AAGGAAAAAGGCAGCCAATC+AGG - Chr3:75796884-75796903 None:intergenic 45.0%
ACATCTTCCTTAGTAGCAGC+TGG - Chr3:75796438-75796457 None:intergenic 45.0%
ACCTGTGCTTCACTGACAAT+AGG - Chr3:75798595-75798614 None:intergenic 45.0%
ACTACACACTGCATGCAACT+TGG - Chr3:75799004-75799023 None:intergenic 45.0%
AGCTTCATTCAAGCTCCATG+GGG + Chr3:75799773-75799792 MsG0380015843.01.T01:CDS 45.0%
AGGGTTGGATGCAAAGCAAA+AGG + Chr3:75797136-75797155 MsG0380015843.01.T01:CDS 45.0%
ATCCATTGGAAGAAGGTTGC+AGG + Chr3:75798563-75798582 MsG0380015843.01.T01:CDS 45.0%
ATCCCATCCCGATGTTGATA+AGG + Chr3:75797636-75797655 MsG0380015843.01.T01:CDS 45.0%
ATCCGTAACCTATGGCGTAA+TGG + Chr3:75798111-75798130 MsG0380015843.01.T01:intron 45.0%
ATCCTCTCTTAATGGCGACT+TGG + Chr3:75797364-75797383 MsG0380015843.01.T01:CDS 45.0%
ATCTCAACGGCTAAGAGTGA+AGG + Chr3:75799183-75799202 MsG0380015843.01.T01:CDS 45.0%
CAAGCTTCATTCAAGCTCCA+TGG + Chr3:75799771-75799790 MsG0380015843.01.T01:CDS 45.0%
CAATAGGCTCCTTCAGAACA+TGG - Chr3:75797196-75797215 None:intergenic 45.0%
CACCATTACGCCATAGGTTA+CGG - Chr3:75798116-75798135 None:intergenic 45.0%
CATGGAGCTTGAATGAAGCT+TGG - Chr3:75799773-75799792 None:intergenic 45.0%
CCTGTGCTTCACTGACAATA+GGG - Chr3:75798594-75798613 None:intergenic 45.0%
CGTAAAGAAGCAGCCAAAGA+TGG - Chr3:75798215-75798234 None:intergenic 45.0%
GAGCAAGATTATGACAGCTG+CGG + Chr3:75797838-75797857 MsG0380015843.01.T01:CDS 45.0%
GGATATACCAGCTGCTACTA+AGG + Chr3:75796428-75796447 MsG0380015843.01.T01:CDS 45.0%
GGTATTTCACAGCTATGGCT+TGG + Chr3:75799558-75799577 MsG0380015843.01.T01:intron 45.0%
GTATCCATAGGAAGGGATAC+AGG - Chr3:75797164-75797183 None:intergenic 45.0%
GTTGCTGAATGGACCATCTT+TGG + Chr3:75798199-75798218 MsG0380015843.01.T01:intron 45.0%
TATTTCGCCCAACTCCAAAC+AGG - Chr3:75797539-75797558 None:intergenic 45.0%
TCTTCGAGCAATTGCTGCAA+AGG + Chr3:75796548-75796567 MsG0380015843.01.T01:CDS 45.0%
TGACTACCTCGATGCAAATG+TGG + Chr3:75799373-75799392 MsG0380015843.01.T01:CDS 45.0%
TTCCAAGTCGCCATTAAGAG+AGG - Chr3:75797369-75797388 None:intergenic 45.0%
TTCTCTCCACATTTGCATCG+AGG - Chr3:75799382-75799401 None:intergenic 45.0%
TTGCATCGAGGTAGTCACAT+CGG - Chr3:75799370-75799389 None:intergenic 45.0%
TTGGTCGCGAATTAGGAGAA+TGG + Chr3:75799816-75799835 MsG0380015843.01.T01:CDS 45.0%
! CGAGGGTATAATCATACCTC+TGG - Chr3:75799237-75799256 None:intergenic 45.0%
! CTGAAGTCTGGCATCGAATA+AGG + Chr3:75800082-75800101 MsG0380015843.01.T01:three_prime_UTR 45.0%
! GGCATTAAACGTAGCGGTTT+TGG + Chr3:75799797-75799816 MsG0380015843.01.T01:CDS 45.0%
!! CATGTTCTGAAGGAGCCTAT+TGG + Chr3:75797194-75797213 MsG0380015843.01.T01:CDS 45.0%
!! CCAAAAAAGCACCAGCTTCA+TGG - Chr3:75797615-75797634 None:intergenic 45.0%
!!! CCATGAAGCTGGTGCTTTTT+TGG + Chr3:75797612-75797631 MsG0380015843.01.T01:CDS 45.0%
!!! GAGCCCGATAGTTGTTTTTG+AGG + Chr3:75797984-75798003 MsG0380015843.01.T01:CDS 45.0%
!!! GGTGCAACAATTTTGACTGG+TGG + Chr3:75799204-75799223 MsG0380015843.01.T01:CDS 45.0%
AACCGAGCACACGTATTCGA+GGG - Chr3:75799254-75799273 None:intergenic 50.0%
ACCAGCTTCATGGCCTAATC+CGG - Chr3:75797605-75797624 None:intergenic 50.0%
ACGAACAGAACCAGAAGCAG+TGG - Chr3:75796520-75796539 None:intergenic 50.0%
AGCCTGCAACCTTCTTCCAA+TGG - Chr3:75798568-75798587 None:intergenic 50.0%
AGGCACACCAACCCTTATCA+AGG - Chr3:75798017-75798036 None:intergenic 50.0%
AGTTGCAGAGCTACCGGTAA+AGG - Chr3:75797816-75797835 None:intergenic 50.0%
ATTCTGCAGGCTCTTCAAGC+TGG + Chr3:75799722-75799741 MsG0380015843.01.T01:intron 50.0%
CAGCCTGTTTCACTAGAGCT+TGG + Chr3:75797955-75797974 MsG0380015843.01.T01:intron 50.0%
CCCTATTGTCAGTGAAGCAC+AGG + Chr3:75798591-75798610 MsG0380015843.01.T01:CDS 50.0%
CCTGTTTCACTAGAGCTTGG+TGG + Chr3:75797958-75797977 MsG0380015843.01.T01:CDS 50.0%
CTACGTTTAATGCCTCCCCA+TGG - Chr3:75799791-75799810 None:intergenic 50.0%
GCATCGAATAAGGTGCGATG+TGG + Chr3:75800092-75800111 MsG0380015843.01.T01:three_prime_UTR 50.0%
GGATCACACCATTACGCCAT+AGG - Chr3:75798122-75798141 None:intergenic 50.0%
GGGTCCAGATTTCCTTAGAC+TGG + Chr3:75798380-75798399 MsG0380015843.01.T01:intron 50.0%
TACCCTCGAATACGTGTGCT+CGG + Chr3:75799249-75799268 MsG0380015843.01.T01:intron 50.0%
TTCATTCAAGCTCCATGGGG+AGG + Chr3:75799776-75799795 MsG0380015843.01.T01:CDS 50.0%
TTGGAAGAAGGTTGCAGGCT+AGG + Chr3:75798568-75798587 MsG0380015843.01.T01:CDS 50.0%
! AGAGATTGGTCCACTGCTTC+TGG + Chr3:75796507-75796526 MsG0380015843.01.T01:CDS 50.0%
! CCACCAAGCTCTAGTGAAAC+AGG - Chr3:75797961-75797980 None:intergenic 50.0%
! GGTAGTCACATCGGTTACGA+TGG - Chr3:75799361-75799380 None:intergenic 50.0%
! GTCACATCGGTTACGATGGT+TGG - Chr3:75799357-75799376 None:intergenic 50.0%
! TTACCGGTAGCTCTGCAACT+GGG + Chr3:75797816-75797835 MsG0380015843.01.T01:CDS 50.0%
! TTTACCGGTAGCTCTGCAAC+TGG + Chr3:75797815-75797834 MsG0380015843.01.T01:CDS 50.0%
!! AAAGAAGTTGGCCTTCCTCC+TGG + Chr3:75797562-75797581 MsG0380015843.01.T01:CDS 50.0%
!! ACTATGCTGGGCTTGCTGAA+GGG + Chr3:75797117-75797136 MsG0380015843.01.T01:CDS 50.0%
!! AGCGGTTTTGGTCGCGAATT+AGG + Chr3:75799809-75799828 MsG0380015843.01.T01:CDS 50.0%
!! TACTATGCTGGGCTTGCTGA+AGG + Chr3:75797116-75797135 MsG0380015843.01.T01:CDS 50.0%
!! TGGGGAGGCATTAAACGTAG+CGG + Chr3:75799791-75799810 MsG0380015843.01.T01:CDS 50.0%
AGCTGCGGCACAGCTAATCA+AGG + Chr3:75797853-75797872 MsG0380015843.01.T01:CDS 55.0%
GAACCGAGCACACGTATTCG+AGG - Chr3:75799255-75799274 None:intergenic 55.0%
GGCTCCTGTATCCCTTCCTA+TGG + Chr3:75797157-75797176 MsG0380015843.01.T01:CDS 55.0%
TATCTGATGAGCAGTGGGGC+TGG + Chr3:75800000-75800019 MsG0380015843.01.T01:CDS 55.0%
TCCGCTAGTGCTTCATCCAG+TGG - Chr3:75796975-75796994 None:intergenic 55.0%
TGCTTACTTGGACCCTGCTG+TGG + Chr3:75797056-75797075 MsG0380015843.01.T01:intron 55.0%
! ACCGGATTAGGCCATGAAGC+TGG + Chr3:75797601-75797620 MsG0380015843.01.T01:CDS 55.0%
! GCCACTGGATGAAGCACTAG+CGG + Chr3:75796971-75796990 MsG0380015843.01.T01:CDS 55.0%
! GGATGAAGCACTAGCGGATC+TGG + Chr3:75796977-75796996 MsG0380015843.01.T01:CDS 55.0%
!! GCTTCTGGTTCTGTTCGTGC+TGG + Chr3:75796522-75796541 MsG0380015843.01.T01:CDS 55.0%
GCACAACCAGCAGCTAGAGC+TGG - Chr3:75797399-75797418 None:intergenic 60.0%
GCTCCCAGTTGCAGAGCTAC+CGG - Chr3:75797822-75797841 None:intergenic 60.0%
! ATCGCTCCAGCTCTAGCTGC+TGG + Chr3:75797390-75797409 MsG0380015843.01.T01:CDS 60.0%
!! TGCTGGGCTTGCTGAAGGGT+TGG + Chr3:75797121-75797140 MsG0380015843.01.T01:CDS 60.0%
! GACTGGTGGGCGTCGCCCAG+AGG + Chr3:75799218-75799237 MsG0380015843.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 75796408 75800244 75796408 ID=MsG0380015843.01;Name=MsG0380015843.01
Chr3 mRNA 75796408 75800244 75796408 ID=MsG0380015843.01.T01;Parent=MsG0380015843.01;Name=MsG0380015843.01.T01;_AED=0.47;_eAED=0.47;_QI=0|1|0.92|1|1|1|14|198|473
Chr3 exon 75796408 75796569 75796408 ID=MsG0380015843.01.T01:exon:1092;Parent=MsG0380015843.01.T01
Chr3 exon 75796918 75796998 75796918 ID=MsG0380015843.01.T01:exon:1093;Parent=MsG0380015843.01.T01
Chr3 exon 75797092 75797240 75797092 ID=MsG0380015843.01.T01:exon:1094;Parent=MsG0380015843.01.T01
Chr3 exon 75797359 75797451 75797359 ID=MsG0380015843.01.T01:exon:1095;Parent=MsG0380015843.01.T01
Chr3 exon 75797534 75797657 75797534 ID=MsG0380015843.01.T01:exon:1096;Parent=MsG0380015843.01.T01
Chr3 exon 75797809 75797874 75797809 ID=MsG0380015843.01.T01:exon:1097;Parent=MsG0380015843.01.T01
Chr3 exon 75797958 75798024 75797958 ID=MsG0380015843.01.T01:exon:1098;Parent=MsG0380015843.01.T01
Chr3 exon 75798200 75798276 75798200 ID=MsG0380015843.01.T01:exon:1099;Parent=MsG0380015843.01.T01
Chr3 exon 75798499 75798612 75798499 ID=MsG0380015843.01.T01:exon:1100;Parent=MsG0380015843.01.T01
Chr3 exon 75799162 75799239 75799162 ID=MsG0380015843.01.T01:exon:1101;Parent=MsG0380015843.01.T01
Chr3 exon 75799327 75799478 75799327 ID=MsG0380015843.01.T01:exon:1102;Parent=MsG0380015843.01.T01
Chr3 exon 75799570 75799630 75799570 ID=MsG0380015843.01.T01:exon:1103;Parent=MsG0380015843.01.T01
Chr3 exon 75799731 75799837 75799731 ID=MsG0380015843.01.T01:exon:1104;Parent=MsG0380015843.01.T01
Chr3 exon 75799956 75800244 75799956 ID=MsG0380015843.01.T01:exon:1105;Parent=MsG0380015843.01.T01
Chr3 CDS 75796408 75796569 75796408 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 CDS 75796918 75796998 75796918 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 CDS 75797092 75797240 75797092 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 CDS 75797359 75797451 75797359 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 CDS 75797534 75797657 75797534 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 CDS 75797809 75797874 75797809 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 CDS 75797958 75798024 75797958 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 CDS 75798200 75798276 75798200 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 CDS 75798499 75798612 75798499 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 CDS 75799162 75799239 75799162 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 CDS 75799327 75799478 75799327 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 CDS 75799570 75799630 75799570 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 CDS 75799731 75799837 75799731 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 CDS 75799956 75800046 75799956 ID=MsG0380015843.01.T01:cds;Parent=MsG0380015843.01.T01
Chr3 three_prime_UTR 75800047 75800244 75800047 ID=MsG0380015843.01.T01:three_prime_utr;Parent=MsG0380015843.01.T01
Gene Sequence

>MsG0380015843.01.T01

ATGGTTGACACAAATGCAGGGGATATACCAGCTGCTACTAAGGAAGATGTTGACCTTGCTGTTGATGCTGCTAAAAGAGCCATTTCCAGAAACAAAGGTAGAGATTGGTCCACTGCTTCTGGTTCTGTTCGTGCTGGCTATCTTCGAGCAATTGCTGCAAAGATAACTGAGAAAAAGAATGAACTAGGCAAGCTTGAATCAATAGATTGTGGAAAGCCACTGGATGAAGCACTAGCGGATCTGGATGATGTTATTGGTTGTTTTGAGTACTATGCTGGGCTTGCTGAAGGGTTGGATGCAAAGCAAAAGGCTCCTGTATCCCTTCCTATGGATACCTTTAAGAGCCATGTTCTGAAGGAGCCTATTGGTGTTGTTGCATTAATTACTCCATGGAACTATCCTCTCTTAATGGCGACTTGGAAAATCGCTCCAGCTCTAGCTGCTGGTTGTGCTGCAATATTGAAGCCGTCTGAATTGGCATCTGTGACCTGTTTGGAGTTGGGCGAAATATGCAAAGAAGTTGGCCTTCCTCCTGGTGTTTTTAATATTGTTACCGGATTAGGCCATGAAGCTGGTGCTTTTTTGGCATCCCATCCCGATGTTGATAAGATTTCCTTTACCGGTAGCTCTGCAACTGGGAGCAAGATTATGACAGCTGCGGCACAGCTAATCAAGCCTGTTTCACTAGAGCTTGGTGGAAAGAGCCCGATAGTTGTTTTTGAGGATGTTGACCTTGATAAGGTTGCTGAATGGACCATCTTTGGCTGCTTCTTTACGAATGGTCAGATATGCAGTGCAACATCTCGCCTTATTGTGCATGAAAGCATAGCCGTAGAATTTGTGAATAAACTTGTGAAATGGGCTGAAAATATCAAAATTTCGGATCCATTGGAAGAAGGTTGCAGGCTAGGCCCTATTGTCAGTGAAGCACAGTATAAGAAAGTATTGAATTTTATCTCAACGGCTAAGAGTGAAGGTGCAACAATTTTGACTGGTGGGCGTCGCCCAGAGCATTTAAAGAAGGGATACTTTGTCGAACCAACCATCGTAACCGATGTGACTACCTCGATGCAAATGTGGAGAGAAGAAGTTTTTGGTCCTGTACTCTCTGTAAAAACATTTAGCACCGAGGAAGAAGCAATCGATCTAGCGAATGACACTCACTATGGCTTGGGGTCTGCTGTAATGTCAAACGATTTAGAAAGATGTGAGCGCGTATCTAAGGCTCTTCAAGCTGGAATTGTATGGATCAATTGTGCTCAACCAAGCTTCATTCAAGCTCCATGGGGAGGCATTAAACGTAGCGGTTTTGGTCGCGAATTAGGAGAATGGGGACTTGATAACTACTTGAGTGTGAAGCAAGTTACTAGATACATATCTGATGAGCAGTGGGGCTGGTATCAATCCCCTTCAAAGCTGTGA
Protein sequence

>MsG0380015843.01.T01

MVDTNAGDIPAATKEDVDLAVDAAKRAISRNKGRDWSTASGSVRAGYLRAIAAKITEKKNELGKLESIDCGKPLDEALADLDDVIGCFEYYAGLAEGLDAKQKAPVSLPMDTFKSHVLKEPIGVVALITPWNYPLLMATWKIAPALAAGCAAILKPSELASVTCLELGEICKEVGLPPGVFNIVTGLGHEAGAFLASHPDVDKISFTGSSATGSKIMTAAAQLIKPVSLELGGKSPIVVFEDVDLDKVAEWTIFGCFFTNGQICSATSRLIVHESIAVEFVNKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNFISTAKSEGATILTGGRRPEHLKKGYFVEPTIVTDVTTSMQMWREEVFGPVLSVKTFSTEEEAIDLANDTHYGLGSAVMSNDLERCERVSKALQAGIVWINCAQPSFIQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTRYISDEQWGWYQSPSKL*