AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016122.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016122.01.T01 MTR_3g083840 95.178 394 19 0 1 394 1 394 0.0 775
MsG0380016122.01.T01 MTR_8g085300 64.846 421 105 3 1 394 1 405 0.0 521
MsG0380016122.01.T01 MTR_4g114580 54.348 322 139 2 77 394 105 422 4.86e-117 349
MsG0380016122.01.T01 MTR_4g068180 27.885 312 155 10 88 385 141 396 2.14e-22 99.0
MsG0380016122.01.T01 MTR_2g099380 26.979 341 169 11 59 385 115 389 6.90e-22 97.4
MsG0380016122.01.T01 MTR_1g069705 27.778 306 157 11 98 381 68 331 2.37e-21 95.5
MsG0380016122.01.T01 MTR_4g115090 24.359 312 170 9 91 400 351 598 2.79e-19 90.5
MsG0380016122.01.T01 MTR_4g081110 25.606 289 182 8 96 371 54 322 4.49e-18 85.9
MsG0380016122.01.T01 MTR_2g099185 27.439 164 96 5 209 370 372 514 4.40e-13 71.2
MsG0380016122.01.T01 MTR_2g099185 27.439 164 96 5 209 370 367 509 4.77e-13 70.9
MsG0380016122.01.T01 MTR_2g099185 27.273 165 97 5 209 371 367 510 5.99e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016122.01.T01 AT4G13730 66.220 373 103 5 33 386 36 404 6.27e-180 507
MsG0380016122.01.T01 AT4G13730 64.304 381 114 4 33 394 36 413 1.34e-178 505
MsG0380016122.01.T01 AT1G04830 58.491 424 142 5 1 401 1 413 1.42e-174 495
MsG0380016122.01.T01 AT1G04830 58.491 424 142 5 1 401 1 413 1.95e-174 495
MsG0380016122.01.T01 AT4G13730 62.730 381 109 5 33 394 36 402 9.79e-171 484
MsG0380016122.01.T01 AT1G04830 50.943 424 131 6 1 401 1 370 1.28e-137 399
MsG0380016122.01.T01 AT4G28550 29.236 301 181 10 93 390 57 328 1.91e-25 106
MsG0380016122.01.T01 AT4G28550 28.826 281 170 9 93 370 57 310 2.35e-23 100
MsG0380016122.01.T01 AT4G28550 29.329 283 168 10 93 371 57 311 4.68e-23 100
MsG0380016122.01.T01 AT2G20440 26.207 290 172 9 93 373 57 313 6.60e-23 99.4
MsG0380016122.01.T01 AT2G20440 26.389 288 170 9 93 371 57 311 1.62e-22 99.0
MsG0380016122.01.T01 AT2G20440 26.389 288 170 9 93 371 57 311 1.62e-22 99.0
MsG0380016122.01.T01 AT2G30710 25.000 388 216 12 17 385 50 381 5.05e-22 97.8
MsG0380016122.01.T01 AT2G20440 31.288 163 94 4 209 371 51 195 7.22e-17 81.3
MsG0380016122.01.T01 AT5G52580 22.930 314 172 12 91 400 365 612 1.08e-15 79.3
MsG0380016122.01.T01 AT5G52580 22.930 314 172 12 91 400 376 623 1.19e-15 79.3
MsG0380016122.01.T01 AT5G52580 22.930 314 172 12 91 400 359 606 1.37e-15 79.3
MsG0380016122.01.T01 AT4G27100 27.063 303 168 13 96 376 54 325 7.37e-15 76.3
MsG0380016122.01.T01 AT4G27100 27.063 303 168 13 96 376 54 325 7.77e-15 76.3
MsG0380016122.01.T01 AT5G54780 25.418 299 163 12 96 371 54 315 4.10e-14 73.9
MsG0380016122.01.T01 AT3G49350 29.630 135 80 4 240 374 332 451 2.35e-13 72.0
MsG0380016122.01.T01 AT3G02460 26.633 199 128 6 183 378 99 282 7.05e-11 63.5
MsG0380016122.01.T01 AT3G02460 26.667 195 125 6 183 374 99 278 9.73e-11 62.8

Find 110 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCACCTAAATGCATAAAAT+TGG 0.183697 3:-79353670 None:intergenic
TTTCTACCTTGTATTGTATT+AGG 0.191879 3:+79353794 MsG0380016122.01.T01:CDS
TTGCTGACAGCCTTCGTATT+TGG 0.221687 3:+79353723 MsG0380016122.01.T01:CDS
CTTGTATTGTATTAGGTTTA+AGG 0.223042 3:+79353801 MsG0380016122.01.T01:CDS
ACACGTTTCTTCGCCATTAT+TGG 0.289125 3:-79350412 None:intergenic
TGCTGACAGCCTTCGTATTT+GGG 0.295459 3:+79353724 MsG0380016122.01.T01:CDS
CCACAGAAGAAGTGCATATC+TGG 0.316824 3:-79352293 None:intergenic
CCACCTAAATGCATAAAATT+GGG 0.333447 3:-79353669 None:intergenic
TTATTGGTTTACGATTATCT+AGG 0.340958 3:-79350396 None:intergenic
AGATAATCGTAAACCAATAA+TGG 0.349340 3:+79350399 MsG0380016122.01.T01:exon
CAACTTGACAATAGTATTGT+TGG 0.351390 3:+79352935 MsG0380016122.01.T01:CDS
TCAATTAGCAAAATCTAATC+AGG 0.352915 3:+79352322 MsG0380016122.01.T01:CDS
CTGGTTTACGTTCTACTATC+TGG 0.362401 3:+79350845 MsG0380016122.01.T01:CDS
TTACTAATTGATAGTTATCT+AGG 0.362499 3:+79350764 MsG0380016122.01.T01:intron
CGGAGGAGGAGGAAGAAGAG+GGG 0.369459 3:-79350585 None:intergenic
GAGGAGGAGGAAGAAGAGGG+GGG 0.391138 3:-79350583 None:intergenic
GTCAATCTGCTCTATGATAT+CGG 0.394833 3:-79352249 None:intergenic
GCGGAGGAGGAGGAAGAAGA+GGG 0.399279 3:-79350586 None:intergenic
GGAGGAGGAGGAAGAAGAGG+GGG 0.401739 3:-79350584 None:intergenic
AAGGTACCTCAGCTAACAAT+TGG 0.404490 3:-79350663 None:intergenic
GAACGTAAACCAGGAGAATC+AGG 0.410846 3:-79350835 None:intergenic
CTAACAATTGGGACTGGGAC+TGG 0.421705 3:-79350651 None:intergenic
GGAGGAAGTAGAAGCGGAGG+AGG 0.434146 3:-79350599 None:intergenic
CATAGGACTGTTGAGCCAAT+CGG 0.442077 3:-79350437 None:intergenic
GGACTGGGCCAGACGGGAGA+TGG 0.445907 3:-79350635 None:intergenic
CCTTGAACGTATCTAATACC+TGG 0.446527 3:-79352478 None:intergenic
AGCGGAGGAGGAGGAAGAAG+AGG 0.453317 3:-79350587 None:intergenic
GGAAGTAGAAGCGGAGGAGG+AGG 0.453695 3:-79350596 None:intergenic
GGGGAACATCCTTTGAGTCT+TGG 0.460850 3:+79351489 MsG0380016122.01.T01:CDS
GAAGGAGGTTCGGATGGGTA+AGG 0.460909 3:-79350499 None:intergenic
GTAATGGCATTGTGATTTGA+GGG 0.463198 3:-79350553 None:intergenic
AAGAACATGATGAAGAACTA+TGG 0.467820 3:+79352996 MsG0380016122.01.T01:CDS
ATTTGTACCTGTGGACCATC+GGG 0.472986 3:-79353764 None:intergenic
GAATGTGTCGGCTTCAGAAA+AGG 0.473240 3:-79352864 None:intergenic
TGATATGTCCATCTCCCGTC+TGG 0.474091 3:+79350627 MsG0380016122.01.T01:CDS
AGTAATGGCATTGTGATTTG+AGG 0.483614 3:-79350554 None:intergenic
TATTGGTTTACGATTATCTA+GGG 0.491189 3:-79350395 None:intergenic
GACCATCGGGATCACTTACA+AGG 0.494906 3:-79353751 None:intergenic
GGACTGGGACTGGGCCAGAC+GGG 0.499409 3:-79350641 None:intergenic
GGGACTGGGACTGGGCCAGA+CGG 0.500466 3:-79350642 None:intergenic
TTCCACCCGATCGTGCCCTC+TGG 0.504111 3:+79351206 MsG0380016122.01.T01:CDS
AGAGGACCAGAGGGCACGAT+CGG 0.511903 3:-79351212 None:intergenic
CCAGGTATTAGATACGTTCA+AGG 0.513591 3:+79352478 MsG0380016122.01.T01:CDS
CTTAAACCTAATACAATACA+AGG 0.513765 3:-79353800 None:intergenic
CACCTAAATGCATAAAATTG+GGG 0.516855 3:-79353668 None:intergenic
GAGGACCAGAGGGCACGATC+GGG 0.517675 3:-79351211 None:intergenic
GACCAGAGGGCACGATCGGG+TGG 0.520756 3:-79351208 None:intergenic
CCTCAGCTAACAATTGGGAC+TGG 0.521487 3:-79350657 None:intergenic
AGGCGGTGGAGAAGGAGGTT+CGG 0.521837 3:-79350509 None:intergenic
GGATCTTCTACGACGGTGAC+AGG 0.525903 3:-79350529 None:intergenic
TCTAGATCACAAATCACTCA+TGG 0.526666 3:+79351468 MsG0380016122.01.T01:CDS
TAATACAATACAAGGTAGAA+AGG 0.527179 3:-79353792 None:intergenic
GGTGGAGAAGGAGGTTCGGA+TGG 0.529470 3:-79350505 None:intergenic
ATAGGACTGTTGAGCCAATC+GGG 0.531109 3:-79350436 None:intergenic
CTAGATCACAAATCACTCAT+GGG 0.531837 3:+79351469 MsG0380016122.01.T01:CDS
AATTTGTACCTGTGGACCAT+CGG 0.532970 3:-79353765 None:intergenic
CAAGGAATACCTGATTCTCC+TGG 0.532971 3:+79350826 MsG0380016122.01.T01:CDS
TCAAGGGATGAATGAAGTAT+TGG 0.533142 3:+79352495 MsG0380016122.01.T01:CDS
TAACAATTGGGACTGGGACT+GGG 0.535698 3:-79350650 None:intergenic
GTCTTGGCAAGACCAGCATA+TGG 0.536179 3:+79351505 MsG0380016122.01.T01:CDS
CTCAGCTAACAATTGGGACT+GGG 0.536883 3:-79350656 None:intergenic
ACGGTGACAGGCGGTGGAGA+AGG 0.539117 3:-79350517 None:intergenic
CTGGTCTTGCCAAGACTCAA+AGG 0.541012 3:-79351498 None:intergenic
CGAAGAAACGTGTTCCCGAT+TGG 0.545087 3:+79350422 MsG0380016122.01.T01:CDS
CCTCTTCTTTGCTAATTCAG+AGG 0.547489 3:-79351230 None:intergenic
TCTACGACGGTGACAGGCGG+TGG 0.556153 3:-79350523 None:intergenic
CAGATAGTAGAACGTAAACC+AGG 0.558115 3:-79350844 None:intergenic
AGGTACCTCAGCTAACAATT+GGG 0.559528 3:-79350662 None:intergenic
TGCTAATTCAGAGGACCAGA+GGG 0.560549 3:-79351221 None:intergenic
TAATTGATAGTTATCTAGGA+AGG 0.561350 3:+79350768 MsG0380016122.01.T01:intron
AAGTGATCCCGATGGTCCAC+AGG 0.563955 3:+79353757 MsG0380016122.01.T01:CDS
AAGGAATAAATTTGTACCTG+TGG 0.566654 3:-79353773 None:intergenic
TTGAGAAGAATCGCATCTCA+AGG 0.571903 3:+79350808 MsG0380016122.01.T01:CDS
CTTGAACGTATCTAATACCT+GGG 0.574822 3:-79352477 None:intergenic
AGAACTATGGCGTCATCTTG+AGG 0.584261 3:+79353009 MsG0380016122.01.T01:CDS
TTCGGATGGGTAAGGAGTGG+CGG 0.587087 3:-79350491 None:intergenic
GGCGGAGGAAGTAGAAGCGG+AGG 0.587826 3:-79350602 None:intergenic
GATTACTCTCCTCTTGACTC+AGG 0.594268 3:+79353691 MsG0380016122.01.T01:CDS
GTGGAGAAGGAGGTTCGGAT+GGG 0.594869 3:-79350504 None:intergenic
CCAGATATGCACTTCTTCTG+TGG 0.602682 3:+79352293 MsG0380016122.01.T01:CDS
GATGGACATATCATCGGCGG+AGG 0.603540 3:-79350617 None:intergenic
AACAAAACAAAAGAATGTGT+CGG 0.603828 3:-79352876 None:intergenic
GGTAAGGAGTGGCGGAGAAG+CGG 0.606722 3:-79350483 None:intergenic
ACGATGTCAAATGTGAGACA+AGG 0.611376 3:+79351436 MsG0380016122.01.T01:CDS
GATGTGTACGCTTTACATCA+CGG 0.611890 3:-79352271 None:intergenic
TTGCTAATTCAGAGGACCAG+AGG 0.613667 3:-79351222 None:intergenic
CGATGTCAAATGTGAGACAA+GGG 0.615721 3:+79351437 MsG0380016122.01.T01:CDS
AATCGAATTCCTGAGTCAAG+AGG 0.617372 3:-79353700 None:intergenic
GTGACAGGCGGTGGAGAAGG+AGG 0.622673 3:-79350514 None:intergenic
TTTACGTTCTACTATCTGGA+AGG 0.623739 3:+79350849 MsG0380016122.01.T01:CDS
ATCGGCGGAGGAAGTAGAAG+CGG 0.628290 3:-79350605 None:intergenic
ACCTAAATGCATAAAATTGG+GGG 0.633746 3:-79353667 None:intergenic
CCAGTCCCAATTGTTAGCTG+AGG 0.637096 3:+79350657 MsG0380016122.01.T01:CDS
ACGGGAGATGGACATATCAT+CGG 0.640857 3:-79350623 None:intergenic
CCTCTGAATTAGCAAAGAAG+AGG 0.642412 3:+79351230 MsG0380016122.01.T01:CDS
ATTGGCTCAACAGTCCTATG+TGG 0.650294 3:+79350440 MsG0380016122.01.T01:CDS
CAGGTATTAGATACGTTCAA+GGG 0.657243 3:+79352479 MsG0380016122.01.T01:CDS
TGAGGGAGGATCTTCTACGA+CGG 0.657366 3:-79350536 None:intergenic
ATGGCATTGTGATTTGAGGG+AGG 0.670489 3:-79350550 None:intergenic
TAGATCACAAATCACTCATG+GGG 0.677361 3:+79351470 MsG0380016122.01.T01:CDS
CTAGTTAGTCAGAAATCACG+AGG 0.679263 3:+79351382 MsG0380016122.01.T01:intron
AGGTTCGGATGGGTAAGGAG+TGG 0.682807 3:-79350494 None:intergenic
GATGTCAAATGTGAGACAAG+GGG 0.689389 3:+79351438 MsG0380016122.01.T01:CDS
CAAGGGTGTCCCAAATACGA+AGG 0.690582 3:-79353733 None:intergenic
ACCCTTGTAAGTGATCCCGA+TGG 0.711690 3:+79353749 MsG0380016122.01.T01:CDS
TCTTCTACGACGGTGACAGG+CGG 0.714180 3:-79350526 None:intergenic
TCGGTGGGAGAGGACCACAT+AGG 0.720286 3:-79350454 None:intergenic
GGAGATGGACATATCATCGG+CGG 0.720907 3:-79350620 None:intergenic
ACCATCGGGATCACTTACAA+GGG 0.727931 3:-79353750 None:intergenic
GTTAGTCAGAAATCACGAGG+AGG 0.733374 3:+79351385 MsG0380016122.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAATAATAAATAACTATA+AGG - Chr3:79350711-79350730 None:intergenic 10.0%
!! ACATTTATATTTATTAAGAT+CGG - Chr3:79353226-79353245 None:intergenic 10.0%
!!! ACAGTTTTTTTTTTTTTTTT+TGG + Chr3:79351025-79351044 MsG0380016122.01.T01:intron 10.0%
!! AAAAAAAAAAAAAAAGGAAC+GGG - Chr3:79351937-79351956 None:intergenic 15.0%
!! ATTTGAAAGAAAAAATGAAA+AGG - Chr3:79350882-79350901 None:intergenic 15.0%
!! CACTTGAAAAAAAAAAAAAA+AGG - Chr3:79351943-79351962 None:intergenic 15.0%
!! GAAAAAAAAAAAAAAAGGAA+CGG - Chr3:79351938-79351957 None:intergenic 15.0%
!!! ATATAAATTAGTCTGAATAA+CGG - Chr3:79351319-79351338 None:intergenic 15.0%
!!! CTCTTTTCAAATTATTAAAA+TGG - Chr3:79353074-79353093 None:intergenic 15.0%
!!! TGATTTGATTTTCTTTTTTT+GGG + Chr3:79352402-79352421 MsG0380016122.01.T01:intron 15.0%
!!! TTAATTTTAATCGTTAACAA+AGG + Chr3:79352110-79352129 MsG0380016122.01.T01:intron 15.0%
!!! TTGATTTGATTTTCTTTTTT+TGG + Chr3:79352401-79352420 MsG0380016122.01.T01:intron 15.0%
!! AAAGAAAAAATGAAAAGGTA+GGG - Chr3:79350877-79350896 None:intergenic 20.0%
!! ACACAAATTTAACAAAACAT+AGG - Chr3:79353191-79353210 None:intergenic 20.0%
!! CACAAATTTAACAAAACATA+GGG - Chr3:79353190-79353209 None:intergenic 20.0%
!! GAAAATCAAATCAAAAGATA+AGG - Chr3:79352395-79352414 None:intergenic 20.0%
!! TAGATATTTCTTGAACAAAT+GGG + Chr3:79353429-79353448 MsG0380016122.01.T01:intron 20.0%
!! TCAAACTTAAAGAGAAAAAA+GGG - Chr3:79352599-79352618 None:intergenic 20.0%
!! TTAGATATTTCTTGAACAAA+TGG + Chr3:79353428-79353447 MsG0380016122.01.T01:intron 20.0%
!! TTCAAACTTAAAGAGAAAAA+AGG - Chr3:79352600-79352619 None:intergenic 20.0%
!! TTGTTAATAATAACTATCTG+TGG - Chr3:79353307-79353326 None:intergenic 20.0%
!!! AGATTCAATTTTGTTGAAAA+AGG - Chr3:79350347-79350366 None:intergenic 20.0%
!!! ATTTGATTTTCTTTTTTTGG+GGG + Chr3:79352404-79352423 MsG0380016122.01.T01:intron 20.0%
!!! GATTTGATTTTCTTTTTTTG+GGG + Chr3:79352403-79352422 MsG0380016122.01.T01:intron 20.0%
!!! TCTTCTTGTTCTTTTTTTTT+GGG + Chr3:79353405-79353424 MsG0380016122.01.T01:intron 20.0%
!!! TTACTAATTGATAGTTATCT+AGG + Chr3:79350764-79350783 MsG0380016122.01.T01:intron 20.0%
!!! TTCTTCTTGTTCTTTTTTTT+TGG + Chr3:79353404-79353423 MsG0380016122.01.T01:intron 20.0%
!!! TTTAAAATTGTGTCTTACTT+TGG - Chr3:79353041-79353060 None:intergenic 20.0%
! AACAAAACAAAAGAATGTGT+CGG - Chr3:79352879-79352898 None:intergenic 25.0%
! AATTACCTGAAAACAACTTA+TGG + Chr3:79350946-79350965 MsG0380016122.01.T01:intron 25.0%
! AGAAGATATACAAACAGAAA+CGG - Chr3:79353486-79353505 None:intergenic 25.0%
! AGATAATCGTAAACCAATAA+TGG + Chr3:79350399-79350418 MsG0380016122.01.T01:exon 25.0%
! ATTAAACACATTCAAGCAAA+AGG - Chr3:79351601-79351620 None:intergenic 25.0%
! ATTTATTGTCCTAATTCTCT+TGG - Chr3:79352639-79352658 None:intergenic 25.0%
! CAGTAATTATGATAAAGCAA+TGG - Chr3:79351641-79351660 None:intergenic 25.0%
! CTTAAACCTAATACAATACA+AGG - Chr3:79353803-79353822 None:intergenic 25.0%
! CTTGTATTGTATTAGGTTTA+AGG + Chr3:79353801-79353820 MsG0380016122.01.T01:CDS 25.0%
! GAAAGAAAAAATGAAAAGGT+AGG - Chr3:79350878-79350897 None:intergenic 25.0%
! GTTGTTGACAAAAATTATCT+CGG - Chr3:79352919-79352938 None:intergenic 25.0%
! TAATACAATACAAGGTAGAA+AGG - Chr3:79353795-79353814 None:intergenic 25.0%
! TCAATTAGCAAAATCTAATC+AGG + Chr3:79352322-79352341 MsG0380016122.01.T01:CDS 25.0%
! TCACAGTTATTTATCCAAAT+AGG + Chr3:79351110-79351129 MsG0380016122.01.T01:intron 25.0%
! TTAAACACATTCAAGCAAAA+GGG - Chr3:79351600-79351619 None:intergenic 25.0%
! TTTCTACCTTGTATTGTATT+AGG + Chr3:79353794-79353813 MsG0380016122.01.T01:CDS 25.0%
!! GGAAAGCTGAATTTTAAATT+TGG - Chr3:79352666-79352685 None:intergenic 25.0%
!! TAATTGATAGTTATCTAGGA+AGG + Chr3:79350768-79350787 MsG0380016122.01.T01:intron 25.0%
!! TTTTTGAACACGTAGAATAA+AGG - Chr3:79352523-79352542 None:intergenic 25.0%
!!! CATACATTGTTTTTGAGTTA+AGG - Chr3:79351136-79351155 None:intergenic 25.0%
!!! GGACTTTTTGTTTACAAAAA+AGG + Chr3:79352747-79352766 MsG0380016122.01.T01:intron 25.0%
!!! TATTGGTTTACGATTATCTA+GGG - Chr3:79350398-79350417 None:intergenic 25.0%
!!! TGAAAAGAGAAGCATTTAAA+GGG + Chr3:79353085-79353104 MsG0380016122.01.T01:intron 25.0%
!!! TTATTGGTTTACGATTATCT+AGG - Chr3:79350399-79350418 None:intergenic 25.0%
!!! TTGAAAAGAGAAGCATTTAA+AGG + Chr3:79353084-79353103 MsG0380016122.01.T01:intron 25.0%
AAAAAAACTGTGAGACTGTT+TGG - Chr3:79351016-79351035 None:intergenic 30.0%
AAAAAACTGTGAGACTGTTT+GGG - Chr3:79351015-79351034 None:intergenic 30.0%
AAATCATGACCTAGTAGTTA+CGG - Chr3:79351997-79352016 None:intergenic 30.0%
AAGAACATGATGAAGAACTA+TGG + Chr3:79352996-79353015 MsG0380016122.01.T01:CDS 30.0%
AAGGAATAAATTTGTACCTG+TGG - Chr3:79353776-79353795 None:intergenic 30.0%
ACCTAAATGCATAAAATTGG+GGG - Chr3:79353670-79353689 None:intergenic 30.0%
ACTTCGGTAACAATATTACT+CGG - Chr3:79353551-79353570 None:intergenic 30.0%
ATATTTCTTGAACAAATGGG+AGG + Chr3:79353432-79353451 MsG0380016122.01.T01:intron 30.0%
ATTAACAATAACTGTCCAGT+AGG + Chr3:79353319-79353338 MsG0380016122.01.T01:intron 30.0%
CAAATCAAAAGATAAGGCTT+TGG - Chr3:79352389-79352408 None:intergenic 30.0%
CAACTTGACAATAGTATTGT+TGG + Chr3:79352935-79352954 MsG0380016122.01.T01:CDS 30.0%
CACCTAAATGCATAAAATTG+GGG - Chr3:79353671-79353690 None:intergenic 30.0%
CATTTAGATTTGAGAGTGAA+AGG - Chr3:79350685-79350704 None:intergenic 30.0%
CCACCTAAATGCATAAAATT+GGG - Chr3:79353672-79353691 None:intergenic 30.0%
CTAGACAATTAATTGTGAGA+CGG + Chr3:79353347-79353366 MsG0380016122.01.T01:intron 30.0%
GAAATGATTAATATGTCCAC+CGG + Chr3:79352715-79352734 MsG0380016122.01.T01:intron 30.0%
TAAGTTTGCATGAGTTTCAA+AGG - Chr3:79352362-79352381 None:intergenic 30.0%
TAGACAATTAATTGTGAGAC+GGG + Chr3:79353348-79353367 MsG0380016122.01.T01:intron 30.0%
TATTGCTTTCCAAGAGAATT+AGG + Chr3:79352627-79352646 MsG0380016122.01.T01:intron 30.0%
TATTTCTTGAACAAATGGGA+GGG + Chr3:79353433-79353452 MsG0380016122.01.T01:intron 30.0%
TCCACCTAAATGCATAAAAT+TGG - Chr3:79353673-79353692 None:intergenic 30.0%
TTAAAGAGAAAAAAGGGTGA+GGG - Chr3:79352593-79352612 None:intergenic 30.0%
TTTGTTTGCACATTAACAGT+AGG + Chr3:79352019-79352038 MsG0380016122.01.T01:intron 30.0%
! AACTTTTGCAGCTTTTGTTA+GGG + Chr3:79351179-79351198 MsG0380016122.01.T01:intron 30.0%
! ATTGTTTTCATTAGCTATCC+TGG + Chr3:79350911-79350930 MsG0380016122.01.T01:intron 30.0%
! TAACTTTTGCAGCTTTTGTT+AGG + Chr3:79351178-79351197 MsG0380016122.01.T01:intron 30.0%
! TCATTTTCTTGTGTGTACAT+GGG - Chr3:79352687-79352706 None:intergenic 30.0%
! TTCATTTTCTTGTGTGTACA+TGG - Chr3:79352688-79352707 None:intergenic 30.0%
!! ACTAGAAAGTTTGTTTCTGT+TGG + Chr3:79353253-79353272 MsG0380016122.01.T01:intron 30.0%
!! CACATCTGTTTCTAAATTTC+AGG + Chr3:79353640-79353659 MsG0380016122.01.T01:intron 30.0%
!! TGTTTTGTTGAACTATTGAG+TGG + Chr3:79352890-79352909 MsG0380016122.01.T01:CDS 30.0%
!!! GTCTCTGATTAGTTTTACTT+CGG - Chr3:79353567-79353586 None:intergenic 30.0%
!!! TTTTTGAGTTAAGGCCTATT+TGG - Chr3:79351127-79351146 None:intergenic 30.0%
AAACTCTGGTGTCTATTACT+AGG - Chr3:79353517-79353536 None:intergenic 35.0%
AAAGGCCTGCGTATAATAAT+TGG - Chr3:79352849-79352868 None:intergenic 35.0%
AACCAAACCAACTAACTTAC+AGG - Chr3:79351295-79351314 None:intergenic 35.0%
AATAACAGCTAGATCATCAG+CGG - Chr3:79352084-79352103 None:intergenic 35.0%
AATCATGACCTAGTAGTTAC+GGG - Chr3:79351996-79352015 None:intergenic 35.0%
AGACAATTAATTGTGAGACG+GGG + Chr3:79353349-79353368 MsG0380016122.01.T01:intron 35.0%
AGCCACAAAAACATTCAGAT+GGG - Chr3:79351364-79351383 None:intergenic 35.0%
AGTAATGGCATTGTGATTTG+AGG - Chr3:79350557-79350576 None:intergenic 35.0%
AGTTGACGATGAACTCAATT+TGG + Chr3:79353125-79353144 MsG0380016122.01.T01:intron 35.0%
ATATAATGTGCTGTACTCTG+GGG + Chr3:79352175-79352194 MsG0380016122.01.T01:intron 35.0%
ATCCTGTAAGTTAGTTGGTT+TGG + Chr3:79351290-79351309 MsG0380016122.01.T01:intron 35.0%
ATGAGTTTCAAAGGAACCAA+GGG - Chr3:79352353-79352372 None:intergenic 35.0%
CAGGTATTAGATACGTTCAA+GGG + Chr3:79352479-79352498 MsG0380016122.01.T01:CDS 35.0%
CATATAATGTGCTGTACTCT+GGG + Chr3:79352174-79352193 MsG0380016122.01.T01:intron 35.0%
CATCAATCCTGTAAGTTAGT+TGG + Chr3:79351285-79351304 MsG0380016122.01.T01:intron 35.0%
CTAGATCACAAATCACTCAT+GGG + Chr3:79351469-79351488 MsG0380016122.01.T01:CDS 35.0%
CTTAAAGAGAAAAAAGGGTG+AGG - Chr3:79352594-79352613 None:intergenic 35.0%
CTTGAACGTATCTAATACCT+GGG - Chr3:79352480-79352499 None:intergenic 35.0%
GTAATGGCATTGTGATTTGA+GGG - Chr3:79350556-79350575 None:intergenic 35.0%
GTCAATCTGCTCTATGATAT+CGG - Chr3:79352252-79352271 None:intergenic 35.0%
TAGATCACAAATCACTCATG+GGG + Chr3:79351470-79351489 MsG0380016122.01.T01:CDS 35.0%
TAGCCACAAAAACATTCAGA+TGG - Chr3:79351365-79351384 None:intergenic 35.0%
TCAAGGGATGAATGAAGTAT+TGG + Chr3:79352495-79352514 MsG0380016122.01.T01:CDS 35.0%
TCATATAATGTGCTGTACTC+TGG + Chr3:79352173-79352192 MsG0380016122.01.T01:intron 35.0%
TCTAGATCACAAATCACTCA+TGG + Chr3:79351468-79351487 MsG0380016122.01.T01:CDS 35.0%
TGTTGCCAATTATTATACGC+AGG + Chr3:79352841-79352860 MsG0380016122.01.T01:intron 35.0%
TTACTGTGTTATCTGTTGTG+AGG + Chr3:79351655-79351674 MsG0380016122.01.T01:intron 35.0%
TTATGTTGCTGTGTAGTAGA+AGG + Chr3:79353596-79353615 MsG0380016122.01.T01:intron 35.0%
TTTACGTTCTACTATCTGGA+AGG + Chr3:79350849-79350868 MsG0380016122.01.T01:CDS 35.0%
! ACCCCCAATTTTATGCATTT+AGG + Chr3:79353666-79353685 MsG0380016122.01.T01:CDS 35.0%
! ATTTGGAACTCCGGATTATT+AGG - Chr3:79351080-79351099 None:intergenic 35.0%
! ATTTTTGCAAAGTTGAACCC+AGG + Chr3:79352460-79352479 MsG0380016122.01.T01:CDS 35.0%
! CATATGGAATCAGTTTTTCC+AGG + Chr3:79351521-79351540 MsG0380016122.01.T01:CDS 35.0%
! CCCAATTTTATGCATTTAGG+TGG + Chr3:79353669-79353688 MsG0380016122.01.T01:CDS 35.0%
! GAAAAACTGATTCCATATGC+TGG - Chr3:79351520-79351539 None:intergenic 35.0%
! TGTTACACTGTGTGTGTTTT+AGG + Chr3:79352223-79352242 MsG0380016122.01.T01:intron 35.0%
! TTTGGAACTCCGGATTATTA+GGG - Chr3:79351079-79351098 None:intergenic 35.0%
!! AGAAAAATGAAGTACCGAAC+AGG - Chr3:79351748-79351767 None:intergenic 35.0%
!! CATGTCCATAAGTTGTTTTC+AGG - Chr3:79350954-79350973 None:intergenic 35.0%
!! CGGTTTTTCAATTCAAACTC+TGG - Chr3:79353531-79353550 None:intergenic 35.0%
AATAGGGAGGAGAAGTTTGT+TGG + Chr3:79353380-79353399 MsG0380016122.01.T01:intron 40.0%
AATCGAATTCCTGAGTCAAG+AGG - Chr3:79353703-79353722 None:intergenic 40.0%
AATTTGTACCTGTGGACCAT+CGG - Chr3:79353768-79353787 None:intergenic 40.0%
ACACGTTTCTTCGCCATTAT+TGG - Chr3:79350415-79350434 None:intergenic 40.0%
ACGATGTCAAATGTGAGACA+AGG + Chr3:79351436-79351455 MsG0380016122.01.T01:CDS 40.0%
ACTGTGAGACTGCACTTATT+TGG - Chr3:79351097-79351116 None:intergenic 40.0%
AGACGGGGTAGAAATGAATA+GGG + Chr3:79353364-79353383 MsG0380016122.01.T01:intron 40.0%
AGGTACCTCAGCTAACAATT+GGG - Chr3:79350665-79350684 None:intergenic 40.0%
AGTCTGCATAGACTATTACC+TGG - Chr3:79351542-79351561 None:intergenic 40.0%
AGTTCATCGTCAACTTTCTC+AGG - Chr3:79353120-79353139 None:intergenic 40.0%
CAAAAAGTCCGTCAACATTC+CGG - Chr3:79352737-79352756 None:intergenic 40.0%
CACATTAACAGTAGGTCTTG+AGG + Chr3:79352027-79352046 MsG0380016122.01.T01:intron 40.0%
CAGATAGTAGAACGTAAACC+AGG - Chr3:79350847-79350866 None:intergenic 40.0%
CATGAGTTTCAAAGGAACCA+AGG - Chr3:79352354-79352373 None:intergenic 40.0%
CCAGGTATTAGATACGTTCA+AGG + Chr3:79352478-79352497 MsG0380016122.01.T01:CDS 40.0%
CCTCTGAATTAGCAAAGAAG+AGG + Chr3:79351230-79351249 MsG0380016122.01.T01:CDS 40.0%
CCTCTTCTTTGCTAATTCAG+AGG - Chr3:79351233-79351252 None:intergenic 40.0%
CCTTGAACGTATCTAATACC+TGG - Chr3:79352481-79352500 None:intergenic 40.0%
CGATGTCAAATGTGAGACAA+GGG + Chr3:79351437-79351456 MsG0380016122.01.T01:CDS 40.0%
CTAGTTAGTCAGAAATCACG+AGG + Chr3:79351382-79351401 MsG0380016122.01.T01:intron 40.0%
CTGGTTTACGTTCTACTATC+TGG + Chr3:79350845-79350864 MsG0380016122.01.T01:CDS 40.0%
GACGATGAACTCAATTTGGT+TGG + Chr3:79353129-79353148 MsG0380016122.01.T01:intron 40.0%
GAGATGAAGATTGCAGAGAA+CGG - Chr3:79353464-79353483 None:intergenic 40.0%
GATGTCAAATGTGAGACAAG+GGG + Chr3:79351438-79351457 MsG0380016122.01.T01:CDS 40.0%
GATGTGTACGCTTTACATCA+CGG - Chr3:79352274-79352293 None:intergenic 40.0%
GCTGATGATCTAGCTGTTAT+TGG + Chr3:79352083-79352102 MsG0380016122.01.T01:intron 40.0%
GTAATTTCCATAAGCTCTCC+AGG - Chr3:79350932-79350951 None:intergenic 40.0%
TTGAGAAGAATCGCATCTCA+AGG + Chr3:79350808-79350827 MsG0380016122.01.T01:CDS 40.0%
! AAGGTACCTCAGCTAACAAT+TGG - Chr3:79350666-79350685 None:intergenic 40.0%
! ACTGCACTTATTTGGAACTC+CGG - Chr3:79351089-79351108 None:intergenic 40.0%
! ATCTAATCAGGTTGTTCCCT+TGG + Chr3:79352334-79352353 MsG0380016122.01.T01:intron 40.0%
!! AATGAAGTACCGAACAGGTA+TGG - Chr3:79351743-79351762 None:intergenic 40.0%
!! CTCCCATCTGAATGTTTTTG+TGG + Chr3:79351359-79351378 MsG0380016122.01.T01:intron 40.0%
!!! CTTTTTTTGGGGGCATTTTC+AGG + Chr3:79352414-79352433 MsG0380016122.01.T01:intron 40.0%
AAAACATAGGGCAGCTTCAC+AGG - Chr3:79353178-79353197 None:intergenic 45.0%
AATTGTCTAGTGCAGCCTAC+TGG - Chr3:79353337-79353356 None:intergenic 45.0%
ACCATCGGGATCACTTACAA+GGG - Chr3:79353753-79353772 None:intergenic 45.0%
ACGGGAGATGGACATATCAT+CGG - Chr3:79350626-79350645 None:intergenic 45.0%
AGAACTATGGCGTCATCTTG+AGG + Chr3:79353009-79353028 MsG0380016122.01.T01:CDS 45.0%
AGCCTATGGAAACGAGCTTA+TGG - Chr3:79350990-79351009 None:intergenic 45.0%
ATAGGACTGTTGAGCCAATC+GGG - Chr3:79350439-79350458 None:intergenic 45.0%
ATGGCATTGTGATTTGAGGG+AGG - Chr3:79350553-79350572 None:intergenic 45.0%
ATTATTAGGGACCCATTCCC+CGG - Chr3:79351066-79351085 None:intergenic 45.0%
ATTTGTACCTGTGGACCATC+GGG - Chr3:79353767-79353786 None:intergenic 45.0%
CAAGGAATACCTGATTCTCC+TGG + Chr3:79350826-79350845 MsG0380016122.01.T01:CDS 45.0%
CATAGGACTGTTGAGCCAAT+CGG - Chr3:79350440-79350459 None:intergenic 45.0%
CCAGATATGCACTTCTTCTG+TGG + Chr3:79352293-79352312 MsG0380016122.01.T01:CDS 45.0%
CTCAGCTAACAATTGGGACT+GGG - Chr3:79350659-79350678 None:intergenic 45.0%
GAACGTAAACCAGGAGAATC+AGG - Chr3:79350838-79350857 None:intergenic 45.0%
GAGACGGGGTAGAAATGAAT+AGG + Chr3:79353363-79353382 MsG0380016122.01.T01:intron 45.0%
GATTACTCTCCTCTTGACTC+AGG + Chr3:79353691-79353710 MsG0380016122.01.T01:CDS 45.0%
GCCTATGGAAACGAGCTTAT+GGG - Chr3:79350989-79351008 None:intergenic 45.0%
GGAATGGGTCCCTAATAATC+CGG + Chr3:79351067-79351086 MsG0380016122.01.T01:intron 45.0%
GTTAGTCAGAAATCACGAGG+AGG + Chr3:79351385-79351404 MsG0380016122.01.T01:intron 45.0%
GTTCAAAAATGATCCCGACG+AGG + Chr3:79352534-79352553 MsG0380016122.01.T01:CDS 45.0%
TAACAATTGGGACTGGGACT+GGG - Chr3:79350653-79350672 None:intergenic 45.0%
TAGCTATCCTGGAGAGCTTA+TGG + Chr3:79350922-79350941 MsG0380016122.01.T01:intron 45.0%
TATGTCCACCGGAATGTTGA+CGG + Chr3:79352726-79352745 MsG0380016122.01.T01:intron 45.0%
TCCCATAAGCTCGTTTCCAT+AGG + Chr3:79350985-79351004 MsG0380016122.01.T01:intron 45.0%
TGACCTAGTAGTTACGGGTA+CGG - Chr3:79351991-79352010 None:intergenic 45.0%
TGCTAATTCAGAGGACCAGA+GGG - Chr3:79351224-79351243 None:intergenic 45.0%
TGCTGACAGCCTTCGTATTT+GGG + Chr3:79353724-79353743 MsG0380016122.01.T01:CDS 45.0%
TGTGCTCTTCATGTCATGAC+TGG + Chr3:79351709-79351728 MsG0380016122.01.T01:intron 45.0%
TTGCTAATTCAGAGGACCAG+AGG - Chr3:79351225-79351244 None:intergenic 45.0%
TTGCTGACAGCCTTCGTATT+TGG + Chr3:79353723-79353742 MsG0380016122.01.T01:CDS 45.0%
! ACTCACTGCATTTTCCTCGT+CGG - Chr3:79352551-79352570 None:intergenic 45.0%
! ATTGGCTCAACAGTCCTATG+TGG + Chr3:79350440-79350459 MsG0380016122.01.T01:CDS 45.0%
! CCACAGAAGAAGTGCATATC+TGG - Chr3:79352296-79352315 None:intergenic 45.0%
!! GAATGTGTCGGCTTCAGAAA+AGG - Chr3:79352867-79352886 None:intergenic 45.0%
!!! TTTTTGGGGGCATTTTCAGG+AGG + Chr3:79352417-79352436 MsG0380016122.01.T01:intron 45.0%
AAAGTCCGTCAACATTCCGG+TGG - Chr3:79352734-79352753 None:intergenic 50.0%
ACCCTTGTAAGTGATCCCGA+TGG + Chr3:79353749-79353768 MsG0380016122.01.T01:CDS 50.0%
AGACTGTTTGGGAGAGCCTA+TGG - Chr3:79351004-79351023 None:intergenic 50.0%
AGAGGGGGGTGAAGTAGTAA+TGG - Chr3:79350572-79350591 None:intergenic 50.0%
CCAGTCCCAATTGTTAGCTG+AGG + Chr3:79350657-79350676 MsG0380016122.01.T01:CDS 50.0%
CCTCAGCTAACAATTGGGAC+TGG - Chr3:79350660-79350679 None:intergenic 50.0%
CGAAGAAACGTGTTCCCGAT+TGG + Chr3:79350422-79350441 MsG0380016122.01.T01:CDS 50.0%
CGGGGTAGAAATGAATAGGG+AGG + Chr3:79353367-79353386 MsG0380016122.01.T01:intron 50.0%
CTAACAATTGGGACTGGGAC+TGG - Chr3:79350654-79350673 None:intergenic 50.0%
GACCATCGGGATCACTTACA+AGG - Chr3:79353754-79353773 None:intergenic 50.0%
GGAGATGGACATATCATCGG+CGG - Chr3:79350623-79350642 None:intergenic 50.0%
GGAGTGAAGAGCTATCGTGA+TGG + Chr3:79352196-79352215 MsG0380016122.01.T01:intron 50.0%
GGGGAACATCCTTTGAGTCT+TGG + Chr3:79351489-79351508 MsG0380016122.01.T01:CDS 50.0%
GTACCGTACCCGTAACTACT+AGG + Chr3:79351985-79352004 MsG0380016122.01.T01:intron 50.0%
GTCTTGGCAAGACCAGCATA+TGG + Chr3:79351505-79351524 MsG0380016122.01.T01:CDS 50.0%
TGAGGGAGGATCTTCTACGA+CGG - Chr3:79350539-79350558 None:intergenic 50.0%
TGATATGTCCATCTCCCGTC+TGG + Chr3:79350627-79350646 MsG0380016122.01.T01:CDS 50.0%
! CTCACTGCATTTTCCTCGTC+GGG - Chr3:79352550-79352569 None:intergenic 50.0%
!! CAAGGGTGTCCCAAATACGA+AGG - Chr3:79353736-79353755 None:intergenic 50.0%
!! CTGGTCTTGCCAAGACTCAA+AGG - Chr3:79351501-79351520 None:intergenic 50.0%
!! TTGGTGTTACCCCCGTTTAC+CGG + Chr3:79351044-79351063 MsG0380016122.01.T01:intron 50.0%
!!! GAGAAGCGGTTTTGTTCGGT+GGG - Chr3:79350472-79350491 None:intergenic 50.0%
AAGTGATCCCGATGGTCCAC+AGG + Chr3:79353757-79353776 MsG0380016122.01.T01:CDS 55.0%
AGGTTCGGATGGGTAAGGAG+TGG - Chr3:79350497-79350516 None:intergenic 55.0%
ATCGGCGGAGGAAGTAGAAG+CGG - Chr3:79350608-79350627 None:intergenic 55.0%
GAAGGAGGTTCGGATGGGTA+AGG - Chr3:79350502-79350521 None:intergenic 55.0%
GATGGACATATCATCGGCGG+AGG - Chr3:79350620-79350639 None:intergenic 55.0%
GGATCTTCTACGACGGTGAC+AGG - Chr3:79350532-79350551 None:intergenic 55.0%
GTACGCGTGCCATACCTGTT+CGG + Chr3:79351731-79351750 MsG0380016122.01.T01:intron 55.0%
GTGGAGAAGGAGGTTCGGAT+GGG - Chr3:79350507-79350526 None:intergenic 55.0%
TCTTCTACGACGGTGACAGG+CGG - Chr3:79350529-79350548 None:intergenic 55.0%
TTCGGATGGGTAAGGAGTGG+CGG - Chr3:79350494-79350513 None:intergenic 55.0%
! CAAGTGCCGCATTTCGTACC+CGG + Chr3:79351957-79351976 MsG0380016122.01.T01:intron 55.0%
!! TGGTGTTACCCCCGTTTACC+GGG + Chr3:79351045-79351064 MsG0380016122.01.T01:intron 55.0%
!!! GGAGAAGCGGTTTTGTTCGG+TGG - Chr3:79350473-79350492 None:intergenic 55.0%
!!! GGCGGAGAAGCGGTTTTGTT+CGG - Chr3:79350476-79350495 None:intergenic 55.0%
ACCCATTCCCCGGTAAACGG+GGG - Chr3:79351056-79351075 None:intergenic 60.0%
ACCCCCGTTTACCGGGGAAT+GGG + Chr3:79351052-79351071 MsG0380016122.01.T01:intron 60.0%
AGCGGAGGAGGAGGAAGAAG+AGG - Chr3:79350590-79350609 None:intergenic 60.0%
AGGCGGTGGAGAAGGAGGTT+CGG - Chr3:79350512-79350531 None:intergenic 60.0%
AGGGTGAGGGAGAGCTTGCA+AGG - Chr3:79352580-79352599 None:intergenic 60.0%
CCGCATTTCGTACCCGGTAG+CGG + Chr3:79351963-79351982 MsG0380016122.01.T01:intron 60.0%
CCGCTACCGGGTACGAAATG+CGG - Chr3:79351966-79351985 None:intergenic 60.0%
CGGAGGAGGAGGAAGAAGAG+GGG - Chr3:79350588-79350607 None:intergenic 60.0%
GACCCATTCCCCGGTAAACG+GGG - Chr3:79351057-79351076 None:intergenic 60.0%
GAGGAGGAGGAAGAAGAGGG+GGG - Chr3:79350586-79350605 None:intergenic 60.0%
GCGGAGGAGGAGGAAGAAGA+GGG - Chr3:79350589-79350608 None:intergenic 60.0%
GGAAGTAGAAGCGGAGGAGG+AGG - Chr3:79350599-79350618 None:intergenic 60.0%
GGACCCATTCCCCGGTAAAC+GGG - Chr3:79351058-79351077 None:intergenic 60.0%
GGAGGAAGTAGAAGCGGAGG+AGG - Chr3:79350602-79350621 None:intergenic 60.0%
GGAGGAGGAGGAAGAAGAGG+GGG - Chr3:79350587-79350606 None:intergenic 60.0%
GGGACCCATTCCCCGGTAAA+CGG - Chr3:79351059-79351078 None:intergenic 60.0%
GGTGGAGAAGGAGGTTCGGA+TGG - Chr3:79350508-79350527 None:intergenic 60.0%
TACCCCCGTTTACCGGGGAA+TGG + Chr3:79351051-79351070 MsG0380016122.01.T01:intron 60.0%
TACGGGTACGGTACCGCTAC+CGG - Chr3:79351979-79351998 None:intergenic 60.0%
TCGGTGGGAGAGGACCACAT+AGG - Chr3:79350457-79350476 None:intergenic 60.0%
! AGAGGACCAGAGGGCACGAT+CGG - Chr3:79351215-79351234 None:intergenic 60.0%
! GGTAAGGAGTGGCGGAGAAG+CGG - Chr3:79350486-79350505 None:intergenic 60.0%
! GGTGTTACCCCCGTTTACCG+GGG + Chr3:79351046-79351065 MsG0380016122.01.T01:intron 60.0%
!!! GCGGTTTTGTTCGGTGGGAG+AGG - Chr3:79350467-79350486 None:intergenic 60.0%
ACGGGTACGGTACCGCTACC+GGG - Chr3:79351978-79351997 None:intergenic 65.0%
ACGGTGACAGGCGGTGGAGA+AGG - Chr3:79350520-79350539 None:intergenic 65.0%
GGCGGAGGAAGTAGAAGCGG+AGG - Chr3:79350605-79350624 None:intergenic 65.0%
GTGACAGGCGGTGGAGAAGG+AGG - Chr3:79350517-79350536 None:intergenic 65.0%
TCTACGACGGTGACAGGCGG+TGG - Chr3:79350526-79350545 None:intergenic 65.0%
TTCCACCCGATCGTGCCCTC+TGG + Chr3:79351206-79351225 MsG0380016122.01.T01:CDS 65.0%
! GAGGACCAGAGGGCACGATC+GGG - Chr3:79351214-79351233 None:intergenic 65.0%
GGACTGGGACTGGGCCAGAC+GGG - Chr3:79350644-79350663 None:intergenic 70.0%
GGACTGGGCCAGACGGGAGA+TGG - Chr3:79350638-79350657 None:intergenic 70.0%
GGGACTGGGACTGGGCCAGA+CGG - Chr3:79350645-79350664 None:intergenic 70.0%
! GACCAGAGGGCACGATCGGG+TGG - Chr3:79351211-79351230 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 79350336 79353853 79350336 ID=MsG0380016122.01;Name=MsG0380016122.01
Chr3 mRNA 79350336 79353853 79350336 ID=MsG0380016122.01.T01;Parent=MsG0380016122.01;Name=MsG0380016122.01.T01;_AED=0.38;_eAED=0.40;_QI=82|0.85|0.75|1|1|1|8|0|403
Chr3 exon 79350336 79350678 79350336 ID=MsG0380016122.01.T01:exon:17950;Parent=MsG0380016122.01.T01
Chr3 exon 79350778 79350870 79350778 ID=MsG0380016122.01.T01:exon:17951;Parent=MsG0380016122.01.T01
Chr3 exon 79351190 79351294 79351190 ID=MsG0380016122.01.T01:exon:17952;Parent=MsG0380016122.01.T01
Chr3 exon 79351390 79351542 79351390 ID=MsG0380016122.01.T01:exon:17953;Parent=MsG0380016122.01.T01
Chr3 exon 79352245 79352343 79352245 ID=MsG0380016122.01.T01:exon:17954;Parent=MsG0380016122.01.T01
Chr3 exon 79352436 79352564 79352436 ID=MsG0380016122.01.T01:exon:17955;Parent=MsG0380016122.01.T01
Chr3 exon 79352863 79353042 79352863 ID=MsG0380016122.01.T01:exon:17956;Parent=MsG0380016122.01.T01
Chr3 exon 79353662 79353853 79353662 ID=MsG0380016122.01.T01:exon:17957;Parent=MsG0380016122.01.T01
Chr3 five_prime_UTR 79350336 79350417 79350336 ID=MsG0380016122.01.T01:five_prime_utr;Parent=MsG0380016122.01.T01
Chr3 CDS 79350418 79350678 79350418 ID=MsG0380016122.01.T01:cds;Parent=MsG0380016122.01.T01
Chr3 CDS 79350778 79350870 79350778 ID=MsG0380016122.01.T01:cds;Parent=MsG0380016122.01.T01
Chr3 CDS 79351190 79351294 79351190 ID=MsG0380016122.01.T01:cds;Parent=MsG0380016122.01.T01
Chr3 CDS 79351390 79351542 79351390 ID=MsG0380016122.01.T01:cds;Parent=MsG0380016122.01.T01
Chr3 CDS 79352245 79352343 79352245 ID=MsG0380016122.01.T01:cds;Parent=MsG0380016122.01.T01
Chr3 CDS 79352436 79352564 79352436 ID=MsG0380016122.01.T01:cds;Parent=MsG0380016122.01.T01
Chr3 CDS 79352863 79353042 79352863 ID=MsG0380016122.01.T01:cds;Parent=MsG0380016122.01.T01
Chr3 CDS 79353662 79353853 79353662 ID=MsG0380016122.01.T01:cds;Parent=MsG0380016122.01.T01
Gene Sequence

>MsG0380016122.01.T01

ATGGCGAAGAAACGTGTTCCCGATTGGCTCAACAGTCCTATGTGGTCCTCTCCCACCGAACAAAACCGCTTCTCCGCCACTCCTTACCCATCCGAACCTCCTTCTCCACCGCCTGTCACCGTCGTAGAAGATCCTCCCTCAAATCACAATGCCATTACTACTTCACCCCCCTCTTCTTCCTCCTCCTCCGCTTCTACTTCCTCCGCCGATGATATGTCCATCTCCCGTCTGGCCCAGTCCCAGTCCCAATTGTTAGCTGAGTTATCTAGGAAGGTTATAGATATGCGTGAATTGAGAAGAATCGCATCTCAAGGAATACCTGATTCTCCTGGTTTACGTTCTACTATCTGGAAGCTTTTGTTAGGGTATCTTCCACCCGATCGTGCCCTCTGGTCCTCTGAATTAGCAAAGAAGAGGTCTCAATACAAACGTTTTAAACAAGATATTCTCATCAATCCTTCAGAAATCACGAGGAGGATGTTCAACTCTGCTAGTTATGATGCTGACGATGTCAAATGTGAGACAAGGGGCATGCTTTCTAGATCACAAATCACTCATGGGGAACATCCTTTGAGTCTTGGCAAGACCAGCATATGGAATCAGTTTTTCCAGGATACCGATATCATAGAGCAGATTGACCGTGATGTAAAGCGTACACATCCAGATATGCACTTCTTCTGTGGCGATTCTCAATTAGCAAAATCTAATCAGGAGGCTTTAAAGAACATATTAATTATTTTTGCAAAGTTGAACCCAGGTATTAGATACGTTCAAGGGATGAATGAAGTATTGGCTCCTTTATTCTACGTGTTCAAAAATGATCCCGACGAGGAAAATGCAGCCTTTTCTGAAGCCGACACATTCTTTTGTTTTGTTGAACTATTGAGTGGATTCCGAGATAATTTTTGTCAACAACTTGACAATAGTATTGTTGGAATTCGTTCAACTATAACAAGATTGTCTCAGCTTTTGAAAGAACATGATGAAGAACTATGGCGTCATCTTGAGGTCACAACCAAAGTCAACCCCCAATTTTATGCATTTAGGTGGATTACTCTCCTCTTGACTCAGGAATTCGATTTTGCTGACAGCCTTCGTATTTGGGACACCCTTGTAAGTGATCCCGATGGTCCACAGGTACAAATTTATTCCTTTCTACCTTGTATTGTATTAGGTTTAAGGTTATCTGAAAAATATCTTATAATATCTTGA
Protein sequence

>MsG0380016122.01.T01

MAKKRVPDWLNSPMWSSPTEQNRFSATPYPSEPPSPPPVTVVEDPPSNHNAITTSPPSSSSSSASTSSADDMSISRLAQSQSQLLAELSRKVIDMRELRRIASQGIPDSPGLRSTIWKLLLGYLPPDRALWSSELAKKRSQYKRFKQDILINPSEITRRMFNSASYDADDVKCETRGMLSRSQITHGEHPLSLGKTSIWNQFFQDTDIIEQIDRDVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQGMNEVLAPLFYVFKNDPDEENAAFSEADTFFCFVELLSGFRDNFCQQLDNSIVGIRSTITRLSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFDFADSLRIWDTLVSDPDGPQVQIYSFLPCIVLGLRLSEKYLIIS*