AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016282.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016282.01.T01 MTR_3g087010 70.024 417 87 8 1 402 1 394 0.0 522
MsG0380016282.01.T01 MTR_3g087010 61.199 317 85 8 1 302 1 294 1.16e-106 316
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016282.01.T01 AT5G10320 60.279 287 102 4 118 395 12 295 3.33e-120 351
MsG0380016282.01.T01 AT5G10320 49.383 405 189 6 1 395 1 399 1.12e-118 351
MsG0380016282.01.T01 AT5G10320 49.630 405 189 7 1 395 1 400 1.47e-118 350
MsG0380016282.01.T01 AT5G10320 57.868 197 77 2 116 306 115 311 8.85e-70 223
MsG0380016282.01.T01 AT5G10320 57.868 197 77 2 116 306 114 310 9.07e-70 223
MsG0380016282.01.T01 AT5G10320 44.586 314 154 7 1 302 1 306 2.11e-67 216

Find 15 sgRNAs with CRISPR-Local

Find 476 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTTCCATTTCAAGTGTCT+TGG 0.429338 3:+81458537 MsG0380016282.01.T01:exon
TAGAGGGCTGGAGTTGAATT+CGG 0.452429 3:+81458574 MsG0380016282.01.T01:exon
TATGGCCAAGACACTTGAAA+TGG 0.481824 3:-81458542 None:intergenic
TGGCCATATGCTGATGATAG+AGG 0.486721 3:+81458557 MsG0380016282.01.T01:exon
TCCTCATCTTGAATCACAGT+TGG 0.495108 3:-81458438 None:intergenic
AGCCCTCTATCATCAGCATA+TGG 0.508316 3:-81458560 None:intergenic
ACCAAATTCTGCAGGTGGAA+AGG 0.517704 3:+81458383 MsG0380016282.01.T01:intron
AAGGTATCAGAGCACCCTCT+TGG 0.536712 3:+81458402 MsG0380016282.01.T01:exon
ATATGCTGATGATAGAGGGC+TGG 0.557435 3:+81458562 MsG0380016282.01.T01:exon
GGCCATATGCTGATGATAGA+GGG 0.578682 3:+81458558 MsG0380016282.01.T01:exon
TCCAACTGTGATTCAAGATG+AGG 0.586293 3:+81458437 MsG0380016282.01.T01:exon
CAGAGCACCCTCTTGGTACG+TGG 0.604824 3:+81458409 MsG0380016282.01.T01:exon
AAATACTTGATCTGTGTCAG+AGG 0.640305 3:+81458496 MsG0380016282.01.T01:exon
GGAATACACCACGTACCAAG+AGG 0.678597 3:-81458417 None:intergenic
GAATACACCACGTACCAAGA+GGG 0.698160 3:-81458416 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTAATTTAAATTAAT+AGG - Chr3:81457018-81457037 None:intergenic 0.0%
!! ATAATTAATTTAAATTAATA+GGG - Chr3:81457017-81457036 None:intergenic 0.0%
!! AAAAATAATAATTTATTGCA+TGG + Chr3:81453309-81453328 MsG0380016281.01.T01:CDS 10.0%
!! AAATCAAATAAATAAAACTA+AGG + Chr3:81452372-81452391 MsG0380016281.01.T01:intron 10.0%
!! AATATTATTCACAAATATAT+TGG + Chr3:81452445-81452464 MsG0380016281.01.T01:intron 10.0%
!! AATCAAATAAATAAAACTAA+GGG + Chr3:81452373-81452392 MsG0380016281.01.T01:intron 10.0%
!! ATAATGTTTGAAAATTTATT+TGG + Chr3:81452486-81452505 MsG0380016281.01.T01:intron 10.0%
!!! AATATATAAAATTTTACAAC+GGG - Chr3:81457247-81457266 None:intergenic 10.0%
!!! ACTTATCTAATTTTAATAAA+AGG - Chr3:81456747-81456766 None:intergenic 10.0%
!!! CAGTTTTTTTTTTTTTTTTA+TGG - Chr3:81457092-81457111 None:intergenic 10.0%
!!! CTGATTTAAATTTTTTTTTA+GGG + Chr3:81453026-81453045 MsG0380016281.01.T01:intron 10.0%
!!! GAATATATAAAATTTTACAA+CGG - Chr3:81457248-81457267 None:intergenic 10.0%
!!! GTAAAAATATTGTTTTTATT+AGG - Chr3:81457850-81457869 None:intergenic 10.0%
!! AAAATGAAATAGTAGTTATT+TGG - Chr3:81451090-81451109 None:intergenic 15.0%
!! AAAGTAGAATATATTGTATT+AGG - Chr3:81451169-81451188 None:intergenic 15.0%
!! AAATGAAATAGTAGTTATTT+GGG - Chr3:81451089-81451108 None:intergenic 15.0%
!! ATATAGAAAAGTGAAAATAA+GGG + Chr3:81452027-81452046 MsG0380016281.01.T01:intron 15.0%
!! ATTAATCAATATGGTAAATA+AGG - Chr3:81453791-81453810 None:intergenic 15.0%
!! ATTATTAGTGTTTATTGTAT+TGG - Chr3:81451131-81451150 None:intergenic 15.0%
!! CCTAAAAAAAAATTTAAATC+AGG - Chr3:81453028-81453047 None:intergenic 15.0%
!! CTTATTAAAAATAATGTGTT+TGG - Chr3:81457514-81457533 None:intergenic 15.0%
!! TAAATTAATAGGGTTAAAAT+TGG - Chr3:81457007-81457026 None:intergenic 15.0%
!! TTAATAATATTTCAAAGCTT+AGG + Chr3:81455814-81455833 MsG0380016282.01.T01:intron 15.0%
!! TTAATCAATATGGTAAATAA+GGG - Chr3:81453790-81453809 None:intergenic 15.0%
!! TTATTAGTGTTTATTGTATT+GGG - Chr3:81451130-81451149 None:intergenic 15.0%
!!! AAGAAAAGTGTATAAATAAA+TGG - Chr3:81451193-81451212 None:intergenic 15.0%
!!! CCTGATTTAAATTTTTTTTT+AGG + Chr3:81453025-81453044 MsG0380016281.01.T01:intron 15.0%
!!! GTTTAAAATCATCTTATATT+GGG + Chr3:81452089-81452108 MsG0380016281.01.T01:intron 15.0%
!!! TATGTCAAATTTTCAATTTT+AGG + Chr3:81458191-81458210 MsG0380016282.01.T01:intron 15.0%
!!! TATTTGATGAATTTTAATAG+AGG - Chr3:81458125-81458144 None:intergenic 15.0%
!!! TGTTTAAAATCATCTTATAT+TGG + Chr3:81452088-81452107 MsG0380016281.01.T01:intron 15.0%
!!! TTATTTACCATATTGATTAA+TGG + Chr3:81453790-81453809 MsG0380016281.01.T01:intron 15.0%
!!! TTTATGCTTATTTTCTATTT+AGG + Chr3:81451737-81451756 MsG0380016281.01.T01:intron 15.0%
!!! TTTGTTTTAATTGAAATGTA+CGG - Chr3:81456262-81456281 None:intergenic 15.0%
!! AAAGAACTCTTACTATATTA+GGG + Chr3:81456805-81456824 MsG0380016282.01.T01:intron 20.0%
!! AATAAGCATAAATTAATGAG+CGG - Chr3:81451729-81451748 None:intergenic 20.0%
!! ACAACTACATATAAAAAAGT+AGG - Chr3:81456197-81456216 None:intergenic 20.0%
!! AGAAGATACTCTTTATTAAA+AGG - Chr3:81452190-81452209 None:intergenic 20.0%
!! ATACATTTAAACGATTCTAA+GGG - Chr3:81451970-81451989 None:intergenic 20.0%
!! ATCAAAAAAAAAAAAAGACC+TGG - Chr3:81452828-81452847 None:intergenic 20.0%
!! CTATAATCAAAATTCAAAAC+AGG - Chr3:81451588-81451607 None:intergenic 20.0%
!! CTATGAATTTCAAAAATAAG+AGG - Chr3:81457295-81457314 None:intergenic 20.0%
!! GATATAGAAAAGTGAAAATA+AGG + Chr3:81452026-81452045 MsG0380016281.01.T01:intron 20.0%
!! TAATCATTAGATTTCAAACA+AGG - Chr3:81455405-81455424 None:intergenic 20.0%
!! TACACCAAATAATAAATAAC+TGG + Chr3:81457221-81457240 MsG0380016282.01.T01:intron 20.0%
!! TACATTCAGAAGTAAATAAA+TGG + Chr3:81455903-81455922 MsG0380016282.01.T01:intron 20.0%
!! TATATTTATTATCGTCAGTT+TGG - Chr3:81456019-81456038 None:intergenic 20.0%
!! TATTCAAATATCACATTTCA+TGG + Chr3:81453178-81453197 MsG0380016281.01.T01:intron 20.0%
!! TATTCATCCATTAATCAATA+TGG - Chr3:81453800-81453819 None:intergenic 20.0%
!! TTAGCTAAATATATTTCATG+AGG + Chr3:81455590-81455609 MsG0380016281.01.T01:intron 20.0%
!! TTTCATTCAACATAATTGTT+TGG + Chr3:81456381-81456400 MsG0380016282.01.T01:intron 20.0%
!!! ACTATAAACTTTTCTTGTAT+TGG - Chr3:81456078-81456097 None:intergenic 20.0%
!!! AGATCATATTTTATGTTTCA+TGG + Chr3:81453958-81453977 MsG0380016281.01.T01:CDS 20.0%
!!! ATATTTTATGTTTCATGGAT+TGG + Chr3:81453963-81453982 MsG0380016281.01.T01:CDS 20.0%
!!! CTTTTATCGAAATGTTAAAA+GGG - Chr3:81452614-81452633 None:intergenic 20.0%
!!! GAAATTAAAACAAGAGTATT+TGG + Chr3:81453846-81453865 MsG0380016281.01.T01:intron 20.0%
!!! GCAATAAATATTCAAACTTT+TGG - Chr3:81457392-81457411 None:intergenic 20.0%
!!! GGTAAAATTAATTTTTGAAG+TGG - Chr3:81457493-81457512 None:intergenic 20.0%
!!! GTATTCATTGACTTAAAAAA+GGG - Chr3:81455886-81455905 None:intergenic 20.0%
!!! TATTTAGTGCATCTTTAAAA+AGG - Chr3:81454202-81454221 None:intergenic 20.0%
!!! TGATAGAAAGGTTTTTTTAT+AGG - Chr3:81452295-81452314 None:intergenic 20.0%
!!! TGTATTCATTGACTTAAAAA+AGG - Chr3:81455887-81455906 None:intergenic 20.0%
!!! TTGTTTTAATTGAAATGTAC+GGG - Chr3:81456261-81456280 None:intergenic 20.0%
!!! TTTAAGGAACGTTTTATATA+TGG + Chr3:81457125-81457144 MsG0380016282.01.T01:intron 20.0%
!!! TTTATTATTTGGTGTACAAT+AGG - Chr3:81457217-81457236 None:intergenic 20.0%
!!! TTTGAAATGATTAATATTCC+TGG - Chr3:81452355-81452374 None:intergenic 20.0%
! AAAAAAACCTTTCTATCAGA+AGG + Chr3:81452297-81452316 MsG0380016281.01.T01:intron 25.0%
! AAAGATTAAAGAAAGCAATG+TGG + Chr3:81453708-81453727 MsG0380016281.01.T01:intron 25.0%
! AAGATTCAATATGTACATGA+TGG - Chr3:81457958-81457977 None:intergenic 25.0%
! AGAAAAGTAATGATGATAAC+TGG + Chr3:81454318-81454337 MsG0380016281.01.T01:intron 25.0%
! AGAAATTTAATTGCTTTCAG+TGG - Chr3:81454611-81454630 None:intergenic 25.0%
! AGATGAAAGCTGAAAAATAT+CGG - Chr3:81457799-81457818 None:intergenic 25.0%
! AGATTCAATATGTACATGAT+GGG - Chr3:81457957-81457976 None:intergenic 25.0%
! ATACCGATCAAGTTTATTTA+CGG - Chr3:81453746-81453765 None:intergenic 25.0%
! ATATACTTACAAAATCCTCA+AGG - Chr3:81453392-81453411 None:intergenic 25.0%
! ATATTACTTATTTGCCTACA+TGG + Chr3:81458083-81458102 MsG0380016282.01.T01:intron 25.0%
! ATTTATTACCATACCTTTCT+TGG + Chr3:81455167-81455186 MsG0380016281.01.T01:intron 25.0%
! CAAAGAACTCTTACTATATT+AGG + Chr3:81456804-81456823 MsG0380016282.01.T01:intron 25.0%
! CAAATAAATAAAACTAAGGG+AGG + Chr3:81452376-81452395 MsG0380016281.01.T01:intron 25.0%
! CATAATTGCTGATGAATTTA+CGG - Chr3:81455844-81455863 None:intergenic 25.0%
! CATACATTTAAACGATTCTA+AGG - Chr3:81451971-81451990 None:intergenic 25.0%
! CATATCAAAGAAAATACTCT+TGG - Chr3:81453418-81453437 None:intergenic 25.0%
! GAAATTTAATTGCTTTCAGT+GGG - Chr3:81454610-81454629 None:intergenic 25.0%
! GAATTTCAAAAATAAGAGGA+AGG - Chr3:81457291-81457310 None:intergenic 25.0%
! GTTCCTTAAAAAAAAAAGAG+TGG - Chr3:81457115-81457134 None:intergenic 25.0%
! TAATTCTATTCTTCTGAATC+TGG + Chr3:81455614-81455633 MsG0380016281.01.T01:intron 25.0%
! TACTCTTTATTAAAAGGAGA+AGG - Chr3:81452184-81452203 None:intergenic 25.0%
! TATACTTACAAAATCCTCAA+GGG - Chr3:81453391-81453410 None:intergenic 25.0%
! TATTGGATTGTTGAACTAAA+AGG + Chr3:81457824-81457843 MsG0380016282.01.T01:intron 25.0%
! TCAACAAGTAAAAAGAACAA+AGG - Chr3:81455221-81455240 None:intergenic 25.0%
! TGGAAATTGGAAGTTATAAA+TGG + Chr3:81452541-81452560 MsG0380016281.01.T01:intron 25.0%
! TTAACATTTCGATAAAAGGT+GGG + Chr3:81452616-81452635 MsG0380016281.01.T01:intron 25.0%
! TTTAACATTTCGATAAAAGG+TGG + Chr3:81452615-81452634 MsG0380016281.01.T01:intron 25.0%
! TTTATTACCATACCTTTCTT+GGG + Chr3:81455168-81455187 MsG0380016281.01.T01:intron 25.0%
! TTTGTTGACACAAATAATTG+TGG - Chr3:81454542-81454561 None:intergenic 25.0%
!! AAAGTCGAAGGAAATTTTTA+TGG + Chr3:81457357-81457376 MsG0380016282.01.T01:intron 25.0%
!! ACCATGCTAATTTTTATTAG+TGG + Chr3:81456706-81456725 MsG0380016282.01.T01:intron 25.0%
!! AGTTTGCAAGTAAATTTTGT+TGG - Chr3:81453572-81453591 None:intergenic 25.0%
!! CATGCTAATTTTTATTAGTG+GGG + Chr3:81456708-81456727 MsG0380016282.01.T01:intron 25.0%
!! CCATGCTAATTTTTATTAGT+GGG + Chr3:81456707-81456726 MsG0380016282.01.T01:intron 25.0%
!! CCTTTTAACATTTCGATAAA+AGG + Chr3:81452612-81452631 MsG0380016281.01.T01:intron 25.0%
!! CCTTTTATCGAAATGTTAAA+AGG - Chr3:81452615-81452634 None:intergenic 25.0%
!! GTTTGCAAGTAAATTTTGTT+GGG - Chr3:81453571-81453590 None:intergenic 25.0%
!! TACAAATTTTCAGCAGAAAT+AGG - Chr3:81454892-81454911 None:intergenic 25.0%
!! TTATCGGTTAAATTTCTTTG+AGG + Chr3:81457330-81457349 MsG0380016282.01.T01:intron 25.0%
!! TTTGCAAGTAAATTTTGTTG+GGG - Chr3:81453570-81453589 None:intergenic 25.0%
!! TTTTCTTTCTTTCTCAGAAT+AGG - Chr3:81458022-81458041 None:intergenic 25.0%
!!! CCTTTTTTTAGAAAATAGGT+CGG - Chr3:81451065-81451084 None:intergenic 25.0%
!!! GAGTATTGATAATATGTTCA+TGG + Chr3:81453101-81453120 MsG0380016281.01.T01:intron 25.0%
!!! GTACTATTTTTTGTTTCAGA+TGG + Chr3:81455713-81455732 MsG0380016282.01.T01:intron 25.0%
!!! GTATGTTTTGATGTTGAAAT+GGG + Chr3:81451986-81452005 MsG0380016281.01.T01:intron 25.0%
!!! TAATTTGTTAGATTCAGTCA+AGG + Chr3:81458323-81458342 MsG0380016282.01.T01:intron 25.0%
!!! TGTATGTTTTGATGTTGAAA+TGG + Chr3:81451985-81452004 MsG0380016281.01.T01:intron 25.0%
!!! TGTGACTATTTTTGAACAAA+GGG + Chr3:81455117-81455136 MsG0380016281.01.T01:intron 25.0%
!!! TTATATATGGTGGATTCTAA+GGG + Chr3:81457138-81457157 MsG0380016282.01.T01:intron 25.0%
!!! TTGTGACTATTTTTGAACAA+AGG + Chr3:81455116-81455135 MsG0380016281.01.T01:intron 25.0%
!!! TTTATATATGGTGGATTCTA+AGG + Chr3:81457137-81457156 MsG0380016282.01.T01:intron 25.0%
!!! TTTGATTTTTCACTTTCCTT+AGG + Chr3:81453237-81453256 MsG0380016281.01.T01:intron 25.0%
!!! TTTTTTTTATGGGAAAAACG+TGG - Chr3:81457081-81457100 None:intergenic 25.0%
AAAAAAGCTCACATCAACAT+TGG - Chr3:81453931-81453950 None:intergenic 30.0%
AAATAATTGTGGCTAAAGTG+AGG - Chr3:81454531-81454550 None:intergenic 30.0%
AAATATGAAATACCAACACC+TGG + Chr3:81452984-81453003 MsG0380016281.01.T01:intron 30.0%
AACAAATTTGTAACTGTGTG+TGG + Chr3:81452913-81452932 MsG0380016281.01.T01:intron 30.0%
AACCCGTAAATAAACTTGAT+CGG + Chr3:81453740-81453759 MsG0380016281.01.T01:intron 30.0%
AAGAATTTGAAGATCGATTG+TGG - Chr3:81454000-81454019 None:intergenic 30.0%
AAGTTTATAGTTGAGCGATA+AGG + Chr3:81456087-81456106 MsG0380016282.01.T01:intron 30.0%
AATGAAAACATAGCCATGAT+CGG + Chr3:81453336-81453355 MsG0380016281.01.T01:CDS 30.0%
AATTTGTGCATGAGATATCA+TGG - Chr3:81455748-81455767 None:intergenic 30.0%
ACAGAAGAAAGAAATGATGT+CGG - Chr3:81456220-81456239 None:intergenic 30.0%
AGAAAAGTGAAAATAAGGGA+AGG + Chr3:81452031-81452050 MsG0380016281.01.T01:intron 30.0%
AGACAAGTAGATGTAACTAT+TGG + Chr3:81452793-81452812 MsG0380016281.01.T01:intron 30.0%
AGGATTCTAATAAACTTTCC+TGG - Chr3:81456177-81456196 None:intergenic 30.0%
AGTAACACTATTCTTCTTAG+AGG + Chr3:81457980-81457999 MsG0380016282.01.T01:intron 30.0%
ATAACTGAAGAACTTAGACA+CGG + Chr3:81455248-81455267 MsG0380016281.01.T01:CDS 30.0%
ATACATTTAGGTGATAGATG+AGG + Chr3:81454740-81454759 MsG0380016281.01.T01:intron 30.0%
ATAGTTACATCTACTTGTCT+AGG - Chr3:81452793-81452812 None:intergenic 30.0%
ATCTTATATTGGGACAACTT+TGG + Chr3:81452099-81452118 MsG0380016281.01.T01:intron 30.0%
ATTCAATATGTACATGATGG+GGG - Chr3:81457955-81457974 None:intergenic 30.0%
ATTCTAATAAACTTTCCTGG+GGG - Chr3:81456174-81456193 None:intergenic 30.0%
CAGCTTTCATCTATTCTTAT+TGG + Chr3:81457807-81457826 MsG0380016282.01.T01:intron 30.0%
CAGTTATAAACATGAACATG+GGG - Chr3:81457058-81457077 None:intergenic 30.0%
CCCACTAATAAAAATTAGCA+TGG - Chr3:81456710-81456729 None:intergenic 30.0%
CGCATGTTTATCAGAATATA+TGG + Chr3:81456543-81456562 MsG0380016282.01.T01:CDS 30.0%
CTTGACTCAATGATACATTT+AGG + Chr3:81454728-81454747 MsG0380016281.01.T01:intron 30.0%
GAAAAGTGAAAATAAGGGAA+GGG + Chr3:81452032-81452051 MsG0380016281.01.T01:intron 30.0%
GACTTATTTGAACTTATCTC+TGG - Chr3:81451935-81451954 None:intergenic 30.0%
GATTCAATATGTACATGATG+GGG - Chr3:81457956-81457975 None:intergenic 30.0%
GATTCTAATAAACTTTCCTG+GGG - Chr3:81456175-81456194 None:intergenic 30.0%
GCAGTTATAAACATGAACAT+GGG - Chr3:81457059-81457078 None:intergenic 30.0%
GGATTCTAATAAACTTTCCT+GGG - Chr3:81456176-81456195 None:intergenic 30.0%
GTAGAAAGCAACACAAAATT+TGG + Chr3:81455060-81455079 MsG0380016281.01.T01:intron 30.0%
GTGATTGATCACATTTAAAG+TGG + Chr3:81454978-81454997 MsG0380016281.01.T01:intron 30.0%
GTTAAAAAACAGAGAACATG+TGG + Chr3:81452508-81452527 MsG0380016281.01.T01:intron 30.0%
GTTGTGATAGACATACTATT+GGG - Chr3:81453662-81453681 None:intergenic 30.0%
TAAAACAAAGTGATCCATGT+AGG - Chr3:81458100-81458119 None:intergenic 30.0%
TAAATATGACATCGCTTACA+AGG + Chr3:81454216-81454235 MsG0380016281.01.T01:intron 30.0%
TAACAAATTACCTTCTTCAG+TGG - Chr3:81458313-81458332 None:intergenic 30.0%
TAACATTTCGATAAAAGGTG+GGG + Chr3:81452617-81452636 MsG0380016281.01.T01:intron 30.0%
TACATTTAGGTGATAGATGA+GGG + Chr3:81454741-81454760 MsG0380016281.01.T01:intron 30.0%
TACCGATCAAGTTTATTTAC+GGG - Chr3:81453745-81453764 None:intergenic 30.0%
TATGTCTATCACAACAACTA+TGG + Chr3:81453667-81453686 MsG0380016281.01.T01:intron 30.0%
TCTTTCAATTTCAGAGTTCT+TGG + Chr3:81455667-81455686 MsG0380016281.01.T01:CDS 30.0%
TGAAGAGAAATACTGTTCTA+AGG + Chr3:81453076-81453095 MsG0380016281.01.T01:intron 30.0%
TGATAATATGTTCATGGTGA+GGG + Chr3:81453107-81453126 MsG0380016281.01.T01:intron 30.0%
TGATAGCAATACAGTCTTTA+AGG + Chr3:81456772-81456791 MsG0380016282.01.T01:intron 30.0%
TGATTAATATTCCTGGTAAG+TGG - Chr3:81452348-81452367 None:intergenic 30.0%
TGTTCAAAAATAGTCACAAG+TGG - Chr3:81455115-81455134 None:intergenic 30.0%
TGTTGTGATAGACATACTAT+TGG - Chr3:81453663-81453682 None:intergenic 30.0%
TTATCGAAATGTTAAAAGGG+TGG - Chr3:81452611-81452630 None:intergenic 30.0%
TTCTATTTAGGCGAACATTT+AGG + Chr3:81451749-81451768 MsG0380016281.01.T01:intron 30.0%
TTGAATATTGATATGCGCAA+TGG - Chr3:81453165-81453184 None:intergenic 30.0%
TTTCAAAAATAAGAGGAAGG+TGG - Chr3:81457288-81457307 None:intergenic 30.0%
TTTGACATACCAACATAGAA+GGG - Chr3:81456581-81456600 None:intergenic 30.0%
! AAGATTTTGTTCGAAACCTA+AGG - Chr3:81453256-81453275 None:intergenic 30.0%
! AAGGAACGTTTTATATATGG+TGG + Chr3:81457128-81457147 MsG0380016282.01.T01:intron 30.0%
! AAGTACATTTGTTGAACTCT+AGG - Chr3:81454840-81454859 None:intergenic 30.0%
! AATTCACATGGGTAGAATTT+TGG + Chr3:81455764-81455783 MsG0380016282.01.T01:intron 30.0%
! ACTTTTCTTGTATTGGATGT+TGG - Chr3:81456071-81456090 None:intergenic 30.0%
! AGGGTATCTAATTTACATGT+GGG + Chr3:81456610-81456629 MsG0380016282.01.T01:intron 30.0%
! AGTACATTTGTTGAACTCTA+GGG - Chr3:81454839-81454858 None:intergenic 30.0%
! ATGCTTTTAAGCCGAAAAAA+TGG - Chr3:81454776-81454795 None:intergenic 30.0%
! GACTATTTGTTTCTTAAGCT+TGG + Chr3:81454354-81454373 MsG0380016281.01.T01:intron 30.0%
! TCATCACTTGGTGATTAATT+GGG + Chr3:81453461-81453480 MsG0380016281.01.T01:intron 30.0%
! TTGATAATATGTTCATGGTG+AGG + Chr3:81453106-81453125 MsG0380016281.01.T01:intron 30.0%
! TTTGAAATTCATAGAAGCAG+AGG + Chr3:81457301-81457320 MsG0380016282.01.T01:intron 30.0%
! TTTGGTTGTGAAAATTTTGC+AGG + Chr3:81456399-81456418 MsG0380016282.01.T01:intron 30.0%
!! AAACAAGAGTATTTGGTAGA+AGG + Chr3:81453853-81453872 MsG0380016281.01.T01:intron 30.0%
!! AAATGTACCAAGAGTTTTGA+AGG + Chr3:81452133-81452152 MsG0380016281.01.T01:intron 30.0%
!! AAGGGTATCTAATTTACATG+TGG + Chr3:81456609-81456628 MsG0380016282.01.T01:intron 30.0%
!! CAAGCTCTAAAAATATTCCT+AGG - Chr3:81452666-81452685 None:intergenic 30.0%
!! CCGACCTATTTTCTAAAAAA+AGG + Chr3:81451062-81451081 MsG0380016281.01.T01:intron 30.0%
!! TCTTATTGATGATGTGATGA+AGG + Chr3:81455440-81455459 MsG0380016281.01.T01:CDS 30.0%
!! TCTTTTTACTTGTTGAGCTA+AGG + Chr3:81455225-81455244 MsG0380016281.01.T01:intron 30.0%
!!! CTGCCACTCTTTTTTTTTTA+AGG + Chr3:81457109-81457128 MsG0380016282.01.T01:intron 30.0%
!!! GATGACAATTCGTGTTATTT+TGG - Chr3:81454407-81454426 None:intergenic 30.0%
!!! GGGACCTTTTTTTAGAAAAT+AGG - Chr3:81451069-81451088 None:intergenic 30.0%
!!! TGTTTTAGCAATTGAGATGA+TGG + Chr3:81454247-81454266 MsG0380016281.01.T01:intron 30.0%
AAAACCTTTCTATCAGAAGG+AGG + Chr3:81452300-81452319 MsG0380016281.01.T01:intron 35.0%
AAAAGGAGAAGGAGAAAATG+AGG - Chr3:81452173-81452192 None:intergenic 35.0%
AAACTAGAATGGAAGAGCTA+CGG + Chr3:81451345-81451364 MsG0380016281.01.T01:CDS 35.0%
AAAGGAGAAGGAGAAAATGA+GGG - Chr3:81452172-81452191 None:intergenic 35.0%
AAATACTTGATCTGTGTCAG+AGG + Chr3:81458496-81458515 MsG0380016282.01.T01:exon 35.0%
AAATTTGTAACTGTGTGTGG+TGG + Chr3:81452916-81452935 MsG0380016281.01.T01:intron 35.0%
AAGTAAGTACACAAGTCTAC+TGG + Chr3:81458236-81458255 MsG0380016282.01.T01:CDS 35.0%
AATAACCAATTATGCATGCC+AGG - Chr3:81453005-81453024 None:intergenic 35.0%
AATTTGTAACTGTGTGTGGT+GGG + Chr3:81452917-81452936 MsG0380016281.01.T01:intron 35.0%
ACATACAGTAGAACCAGTTT+AGG - Chr3:81454104-81454123 None:intergenic 35.0%
ACATTGTGCAAAAACTGTTC+AGG - Chr3:81454430-81454449 None:intergenic 35.0%
ACTCATCTCAGAAAAGTCAA+AGG + Chr3:81454561-81454580 MsG0380016281.01.T01:intron 35.0%
AGAAAATAGGTCGGTTATTC+CGG - Chr3:81451056-81451075 None:intergenic 35.0%
AGAACCAGTTTAGGAATGAA+AGG - Chr3:81454095-81454114 None:intergenic 35.0%
AGCAAACACATATTGGTGAA+GGG - Chr3:81454468-81454487 None:intergenic 35.0%
AGCTAAGGTACACGAATAAT+AGG + Chr3:81455524-81455543 MsG0380016281.01.T01:intron 35.0%
AGTAAGTTGTGTTAGTAGTC+AGG - Chr3:81452250-81452269 None:intergenic 35.0%
ATACGATCCTTCAAAACTCT+TGG - Chr3:81452143-81452162 None:intergenic 35.0%
ATCCATAGGTTCTTATTCTC+AGG + Chr3:81452407-81452426 MsG0380016281.01.T01:intron 35.0%
ATCTCATGCACAAATTCACA+TGG + Chr3:81455752-81455771 MsG0380016282.01.T01:intron 35.0%
ATGAAAACATAGCCATGATC+GGG + Chr3:81453337-81453356 MsG0380016281.01.T01:CDS 35.0%
ATGACAGAGCTTTCTTTCAA+GGG - Chr3:81455288-81455307 None:intergenic 35.0%
ATGCAAATACAGTGACAGTA+AGG - Chr3:81451565-81451584 None:intergenic 35.0%
CAAAGTAGGTCAATTAAACC+GGG + Chr3:81451229-81451248 MsG0380016281.01.T01:intron 35.0%
CAAGGCAAGTTTAAGAAACT+AGG + Chr3:81454173-81454192 MsG0380016281.01.T01:intron 35.0%
CAAGTAGATGTAACTATTGG+AGG + Chr3:81452796-81452815 MsG0380016281.01.T01:intron 35.0%
CACAGAGAGCTATATTTATC+AGG + Chr3:81454035-81454054 MsG0380016281.01.T01:CDS 35.0%
CATGTTCTCTCTAAATCTGT+TGG + Chr3:81456639-81456658 MsG0380016282.01.T01:intron 35.0%
CATTGTGCAAAAACTGTTCA+GGG - Chr3:81454429-81454448 None:intergenic 35.0%
CCAAAGTAGGTCAATTAAAC+CGG + Chr3:81451228-81451247 MsG0380016281.01.T01:intron 35.0%
CGGGCCAGTTATTTATTATT+TGG - Chr3:81457228-81457247 None:intergenic 35.0%
CTCTCTGTGAATGAAAGAAT+AGG - Chr3:81454024-81454043 None:intergenic 35.0%
CTCTTTGGATAAACAGCTTA+TGG + Chr3:81451774-81451793 MsG0380016281.01.T01:intron 35.0%
GAACCAGTTTAGGAATGAAA+GGG - Chr3:81454094-81454113 None:intergenic 35.0%
GAAGCAGAGGTCAAAATTAT+CGG + Chr3:81457314-81457333 MsG0380016282.01.T01:intron 35.0%
GGCAGTTATAAACATGAACA+TGG - Chr3:81457060-81457079 None:intergenic 35.0%
GGTTTCGAACAAAATCTTGT+TGG + Chr3:81453258-81453277 MsG0380016281.01.T01:intron 35.0%
GTAAATAAGGGAGTTAGACA+GGG - Chr3:81453778-81453797 None:intergenic 35.0%
GTACACGAATAATAGGCTAA+CGG + Chr3:81455531-81455550 MsG0380016281.01.T01:intron 35.0%
GTTTGACATACCAACATAGA+AGG - Chr3:81456582-81456601 None:intergenic 35.0%
TAACTGAAGAACTTAGACAC+GGG + Chr3:81455249-81455268 MsG0380016281.01.T01:CDS 35.0%
TACTATATTAGGGCTGTGTT+TGG + Chr3:81456815-81456834 MsG0380016282.01.T01:intron 35.0%
TAGAAATGTGAGTGTCTTGA+TGG - Chr3:81454646-81454665 None:intergenic 35.0%
TCAAACAAGGAACATTGAGA+AGG - Chr3:81455392-81455411 None:intergenic 35.0%
TCTATGTTGGTATGTCAAAC+TGG + Chr3:81456582-81456601 MsG0380016282.01.T01:intron 35.0%
TCTCACCTCAACAAACTAAA+AGG - Chr3:81454706-81454725 None:intergenic 35.0%
TCTCATGCACAAATTCACAT+GGG + Chr3:81455753-81455772 MsG0380016282.01.T01:intron 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + Chr3:81451215-81451234 MsG0380016281.01.T01:intron 35.0%
TGCAAATACAGTGACAGTAA+GGG - Chr3:81451564-81451583 None:intergenic 35.0%
TGTTTCAGAGTGTGATTACT+TGG + Chr3:81454680-81454699 MsG0380016281.01.T01:intron 35.0%
TTATCAGGTACATGCTAGAT+TGG + Chr3:81454050-81454069 MsG0380016281.01.T01:CDS 35.0%
TTCAATTTCAGAGTTCTTGG+TGG + Chr3:81455670-81455689 MsG0380016281.01.T01:CDS 35.0%
TTCCTGAGAATAAGAACCTA+TGG - Chr3:81452412-81452431 None:intergenic 35.0%
TTCGATGAAAAATCTCACAC+CGG - Chr3:81457675-81457694 None:intergenic 35.0%
TTGACATACCAACATAGAAG+GGG - Chr3:81456580-81456599 None:intergenic 35.0%
TTGCACATATTTGAGAAACG+TGG + Chr3:81451300-81451319 MsG0380016281.01.T01:intron 35.0%
TTTATAGTTGAGCGATAAGG+TGG + Chr3:81456090-81456109 MsG0380016282.01.T01:intron 35.0%
! AAAGCTAGCTTATAGCTTCT+TGG + Chr3:81456847-81456866 MsG0380016282.01.T01:intron 35.0%
! AAAGCTGTGCTTTCTACTTT+TGG + Chr3:81455976-81455995 MsG0380016282.01.T01:intron 35.0%
! ATTTAAACGATTCTAAGGGC+AGG - Chr3:81451966-81451985 None:intergenic 35.0%
! ATTTTGCAGGTATGACTATG+AGG + Chr3:81456412-81456431 MsG0380016282.01.T01:intron 35.0%
! CTCATCACTTGGTGATTAAT+TGG + Chr3:81453460-81453479 MsG0380016281.01.T01:intron 35.0%
! CTTTGAGGATTAAAAGTCGA+AGG + Chr3:81457345-81457364 MsG0380016282.01.T01:intron 35.0%
! GAAAGAGCATGAAATTAGCT+AGG - Chr3:81451455-81451474 None:intergenic 35.0%
! TCTACTTGTCTAGGATATTG+TGG - Chr3:81452784-81452803 None:intergenic 35.0%
! TGTTTCCATTTCAAGTGTCT+TGG + Chr3:81458537-81458556 MsG0380016282.01.T01:exon 35.0%
! TTCAATATGTACATGATGGG+GGG - Chr3:81457954-81457973 None:intergenic 35.0%
! TTCTTCTGAATCTGGTTTGA+AGG + Chr3:81455622-81455641 MsG0380016281.01.T01:intron 35.0%
! TTGTCTAGGATATTGTGGAA+TGG - Chr3:81452779-81452798 None:intergenic 35.0%
!! AACTATTGGAGGTATTATCC+AGG + Chr3:81452807-81452826 MsG0380016281.01.T01:intron 35.0%
!! AAGTCAGGTTGAGCTTAATT+TGG + Chr3:81455194-81455213 MsG0380016281.01.T01:intron 35.0%
!! AGAGAAATACTGTTCTAAGG+AGG + Chr3:81453079-81453098 MsG0380016281.01.T01:intron 35.0%
!! GCTCTAAAAATATTCCTAGG+TGG - Chr3:81452663-81452682 None:intergenic 35.0%
!! GGATTAGCTTATAAGCTTGT+TGG + Chr3:81456868-81456887 MsG0380016282.01.T01:intron 35.0%
!!! ATTCGTGTTATTTTGGCAGT+TGG - Chr3:81454400-81454419 None:intergenic 35.0%
!!! TTTTGGAGTTGCTTCTATCA+TGG + Chr3:81455781-81455800 MsG0380016282.01.T01:intron 35.0%
AAACTCCATATGCAACTCCT+CGG - Chr3:81455648-81455667 None:intergenic 40.0%
AAAGGCAAATTCTACCCTTG+AGG + Chr3:81453374-81453393 MsG0380016281.01.T01:CDS 40.0%
AACACCAACAAGGAAAGATG+AGG + Chr3:81454956-81454975 MsG0380016281.01.T01:intron 40.0%
AACTGAAGAACTTAGACACG+GGG + Chr3:81455250-81455269 MsG0380016281.01.T01:CDS 40.0%
AAGCACCAGCAAACACATAT+TGG - Chr3:81454475-81454494 None:intergenic 40.0%
AAGTCTGTGACAGCCTAAAA+TGG + Chr3:81453517-81453536 MsG0380016281.01.T01:intron 40.0%
AATTGTGGCTAAAGTGAGGT+CGG - Chr3:81454527-81454546 None:intergenic 40.0%
AATTTCCGAGCTTATGCCTA+GGG + Chr3:81451521-81451540 MsG0380016281.01.T01:CDS 40.0%
ACAACGCATGGTTTCATTCA+TGG + Chr3:81451382-81451401 MsG0380016281.01.T01:CDS 40.0%
ACATACTATTGGGTCGAAGA+CGG - Chr3:81453652-81453671 None:intergenic 40.0%
ACCGGTCTCACTAAATGATT+TGG - Chr3:81457657-81457676 None:intergenic 40.0%
ACCTACAGTTATCTTTCTCG+CGG + Chr3:81453604-81453623 MsG0380016281.01.T01:intron 40.0%
ACTTACTCCCAAGAAAGGTA+TGG - Chr3:81455178-81455197 None:intergenic 40.0%
AGAGAACATGTGGTAGAATG+AGG + Chr3:81452518-81452537 MsG0380016281.01.T01:intron 40.0%
AGTTCCTCCTTCTGATAGAA+AGG - Chr3:81452307-81452326 None:intergenic 40.0%
ATAGTCACAAGTGGTCCAAA+TGG - Chr3:81455106-81455125 None:intergenic 40.0%
ATCACCTCATCTTTCCTTGT+TGG - Chr3:81454963-81454982 None:intergenic 40.0%
ATGGTAAAGACAGCAGTGAA+CGG - Chr3:81453146-81453165 None:intergenic 40.0%
ATTACCTTCTTCAGTGGCTT+CGG - Chr3:81458307-81458326 None:intergenic 40.0%
ATTGCTTTCAGTGGGAAATG+TGG - Chr3:81454602-81454621 None:intergenic 40.0%
ATTTAGGTGATAGATGAGGG+TGG + Chr3:81454744-81454763 MsG0380016281.01.T01:intron 40.0%
ATTTGTAACTGTGTGTGGTG+GGG + Chr3:81452918-81452937 MsG0380016281.01.T01:intron 40.0%
CAACATTGGAATCACAAAGC+AGG - Chr3:81453917-81453936 None:intergenic 40.0%
CACAAGTCTACTGGAATTAC+TGG + Chr3:81458245-81458264 MsG0380016282.01.T01:CDS 40.0%
CAGCAAACACATATTGGTGA+AGG - Chr3:81454469-81454488 None:intergenic 40.0%
CATGACAGAGCTTTCTTTCA+AGG - Chr3:81455289-81455308 None:intergenic 40.0%
CCGGTTTAATTGACCTACTT+TGG - Chr3:81451231-81451250 None:intergenic 40.0%
CCTGGAACTGAAAAGATAGT+AGG + Chr3:81452887-81452906 MsG0380016281.01.T01:intron 40.0%
CTACTGTATGTGTGTCTAGA+AGG + Chr3:81454113-81454132 MsG0380016281.01.T01:intron 40.0%
CTATTCTTCTTAGAGGTCTC+TGG + Chr3:81457987-81458006 MsG0380016282.01.T01:intron 40.0%
CTCTTTCTGTTAGAACCTTG+CGG + Chr3:81451468-81451487 MsG0380016281.01.T01:CDS 40.0%
CTGCTACAATACTCATCACT+TGG + Chr3:81453449-81453468 MsG0380016281.01.T01:CDS 40.0%
CTTCACCAATATGTGTTTGC+TGG + Chr3:81454467-81454486 MsG0380016281.01.T01:intron 40.0%
CTTCTTCTCTATCAACTGCA+AGG + Chr3:81455501-81455520 MsG0380016281.01.T01:CDS 40.0%
GAAAATAGGTCGGTTATTCC+GGG - Chr3:81451055-81451074 None:intergenic 40.0%
GATAAAAGGTGGGGAAACAT+GGG + Chr3:81452626-81452645 MsG0380016281.01.T01:intron 40.0%
GATTTGGCCCATTCAATAGT+GGG - Chr3:81457641-81457660 None:intergenic 40.0%
GCATGAAATTAGCTAGGAAG+CGG - Chr3:81451449-81451468 None:intergenic 40.0%
GCCAAATCATTTAGTGAGAC+CGG + Chr3:81457653-81457672 MsG0380016282.01.T01:intron 40.0%
GGATAAACAGCTTATGGCTT+AGG + Chr3:81451780-81451799 MsG0380016281.01.T01:intron 40.0%
GGGTAAAATACAATCCACCT+AGG + Chr3:81452646-81452665 MsG0380016281.01.T01:intron 40.0%
GGTAAATAAGGGAGTTAGAC+AGG - Chr3:81453779-81453798 None:intergenic 40.0%
GGTAGTTCCCACTATTGAAT+GGG + Chr3:81457631-81457650 MsG0380016282.01.T01:intron 40.0%
GTATGTCAAACTGGCTACAA+GGG + Chr3:81456591-81456610 MsG0380016282.01.T01:intron 40.0%
GTCTATCACAACAACTATGG+TGG + Chr3:81453670-81453689 MsG0380016281.01.T01:intron 40.0%
GTGTGAGGGTTAAACTAGAA+TGG + Chr3:81451334-81451353 MsG0380016281.01.T01:CDS 40.0%
GTTGCAGAACAAGAGAGTAA+TGG + Chr3:81451680-81451699 MsG0380016281.01.T01:CDS 40.0%
TAATATGTTCATGGTGAGGG+CGG + Chr3:81453110-81453129 MsG0380016281.01.T01:intron 40.0%
TAATTTCCGAGCTTATGCCT+AGG + Chr3:81451520-81451539 MsG0380016281.01.T01:CDS 40.0%
TAGTCACAAGTGGTCCAAAT+GGG - Chr3:81455105-81455124 None:intergenic 40.0%
TATGGCCAAGACACTTGAAA+TGG - Chr3:81458545-81458564 None:intergenic 40.0%
TCCAACTGTGATTCAAGATG+AGG + Chr3:81458437-81458456 MsG0380016282.01.T01:exon 40.0%
TCCTCATCTTGAATCACAGT+TGG - Chr3:81458441-81458460 None:intergenic 40.0%
TCTGTAGAAAGAAGCAAGCA+AGG - Chr3:81453828-81453847 None:intergenic 40.0%
TGACCCTTTCATTCCTAAAC+TGG + Chr3:81454088-81454107 MsG0380016281.01.T01:CDS 40.0%
TGATACGCATCCTCAACAAA+CGG - Chr3:81451653-81451672 None:intergenic 40.0%
TGATGTAATCACCACTTACC+AGG + Chr3:81452334-81452353 MsG0380016281.01.T01:intron 40.0%
TGGTAGAATGAGGTGGAAAT+TGG + Chr3:81452528-81452547 MsG0380016281.01.T01:intron 40.0%
TGGTAGCTCAGAGATAACTT+TGG - Chr3:81458273-81458292 None:intergenic 40.0%
TGGTAGTTCCCACTATTGAA+TGG + Chr3:81457630-81457649 MsG0380016282.01.T01:intron 40.0%
TGTACCTCAAGCTAGATTGA+AGG + Chr3:81454150-81454169 MsG0380016281.01.T01:intron 40.0%
TGTAGCTGTTATCATGCAGT+TGG + Chr3:81454908-81454927 MsG0380016281.01.T01:intron 40.0%
TTAGGCAAAGTGCATTACTG+AGG + Chr3:81458209-81458228 MsG0380016282.01.T01:intron 40.0%
TTGACTAAAAGCTGTTCTGC+AGG + Chr3:81456488-81456507 MsG0380016282.01.T01:intron 40.0%
TTGCTTTCAGTGGGAAATGT+GGG - Chr3:81454601-81454620 None:intergenic 40.0%
TTGGTCAGCTGGTATATTTC+TGG + Chr3:81456658-81456677 MsG0380016282.01.T01:intron 40.0%
! ATATTGTGGAATGGTGGAGA+GGG - Chr3:81452770-81452789 None:intergenic 40.0%
! ATTCAATAGTGGGAACTACC+AGG - Chr3:81457631-81457650 None:intergenic 40.0%
! ATTTGCTGCAAACACCAACA+AGG + Chr3:81454946-81454965 MsG0380016281.01.T01:intron 40.0%
! CCTACTATCTTTTCAGTTCC+AGG - Chr3:81452890-81452909 None:intergenic 40.0%
! CTTTTCAGTTCCAGGAAGTT+GGG - Chr3:81452882-81452901 None:intergenic 40.0%
! GATTTCTTCTCCGTTTGTTG+AGG + Chr3:81451640-81451659 MsG0380016281.01.T01:intron 40.0%
! GGTAGAATTTGCCTTTTGCA+TGG - Chr3:81453370-81453389 None:intergenic 40.0%
! GTAGCTTTTGAGCTTATAGC+TGG + Chr3:81456962-81456981 MsG0380016282.01.T01:intron 40.0%
! TCTAGGATATTGTGGAATGG+TGG - Chr3:81452776-81452795 None:intergenic 40.0%
! TCTTTTCAGTTCCAGGAAGT+TGG - Chr3:81452883-81452902 None:intergenic 40.0%
! TGATTTGGCCCATTCAATAG+TGG - Chr3:81457642-81457661 None:intergenic 40.0%
! TGCACTGATAAACGAAGAAG+AGG + Chr3:81455307-81455326 MsG0380016281.01.T01:CDS 40.0%
! TTCAATAGTGGGAACTACCA+GGG - Chr3:81457630-81457649 None:intergenic 40.0%
!! AAGCTTGTTGGTTGAAAACG+TGG + Chr3:81456880-81456899 MsG0380016282.01.T01:intron 40.0%
!! CAAAGGGTCTTTTGACTGAA+AGG + Chr3:81455133-81455152 MsG0380016281.01.T01:intron 40.0%
!! TCAGACAACATTTTGACAGC+TGG - Chr3:81456460-81456479 None:intergenic 40.0%
!!! CTTGGCCTTTTAGTTTGTTG+AGG + Chr3:81454698-81454717 MsG0380016281.01.T01:intron 40.0%
!!! GACGGAGGGAGTATTTTTTT+TGG + Chr3:81451251-81451270 MsG0380016281.01.T01:intron 40.0%
AAAAAATACTCCCTCCGTCC+CGG - Chr3:81451250-81451269 None:intergenic 45.0%
AACCACTTGAGCTACACCTT+GGG - Chr3:81452218-81452237 None:intergenic 45.0%
AATATGTTCATGGTGAGGGC+GGG + Chr3:81453111-81453130 MsG0380016281.01.T01:intron 45.0%
AATGGAAGAGCTACGGAAAC+TGG + Chr3:81451352-81451371 MsG0380016281.01.T01:CDS 45.0%
ACAGTTATCTTTCTCGCGGA+GGG + Chr3:81453608-81453627 MsG0380016281.01.T01:intron 45.0%
ACCAAATTCTGCAGGTGGAA+AGG + Chr3:81458383-81458402 MsG0380016282.01.T01:intron 45.0%
ACCTGACTTACTCCCAAGAA+AGG - Chr3:81455183-81455202 None:intergenic 45.0%
ACCTTTCCACCTGCAGAATT+TGG - Chr3:81458387-81458406 None:intergenic 45.0%
ACCTTTCTTGGGAGTAAGTC+AGG + Chr3:81455179-81455198 MsG0380016281.01.T01:intron 45.0%
AGCCCTCTATCATCAGCATA+TGG - Chr3:81458563-81458582 None:intergenic 45.0%
AGTTGAGCGATAAGGTGGTT+TGG + Chr3:81456095-81456114 MsG0380016282.01.T01:intron 45.0%
ATACAGTGACAGTAAGGGAG+TGG - Chr3:81451559-81451578 None:intergenic 45.0%
ATATGCTGATGATAGAGGGC+TGG + Chr3:81458562-81458581 MsG0380016282.01.T01:exon 45.0%
ATCACAAAGCAGGTTTCAGG+TGG - Chr3:81453907-81453926 None:intergenic 45.0%
CAACACCTGGCATGCATAAT+TGG + Chr3:81452997-81453016 MsG0380016281.01.T01:intron 45.0%
CAATTATGCATGCCAGGTGT+TGG - Chr3:81452999-81453018 None:intergenic 45.0%
CGATAAAAGGTGGGGAAACA+TGG + Chr3:81452625-81452644 MsG0380016281.01.T01:intron 45.0%
CTATCAACTGCAAGGAGCTA+AGG + Chr3:81455509-81455528 MsG0380016281.01.T01:CDS 45.0%
CTCAAGCTAGATTGAAGGCA+AGG + Chr3:81454155-81454174 MsG0380016281.01.T01:intron 45.0%
CTCTAAATCTGTTGGTCAGC+TGG + Chr3:81456647-81456666 MsG0380016282.01.T01:intron 45.0%
CTGTGACAGCCTAAAATGGT+TGG + Chr3:81453521-81453540 MsG0380016281.01.T01:intron 45.0%
GAACATGTGGTAGAATGAGG+TGG + Chr3:81452521-81452540 MsG0380016281.01.T01:intron 45.0%
GAAGAGAGGTTGGAGTGATA+TGG + Chr3:81456123-81456142 MsG0380016282.01.T01:intron 45.0%
GAAGCGGTTACAGTGATGAT+CGG - Chr3:81451433-81451452 None:intergenic 45.0%
GAATACACCACGTACCAAGA+GGG - Chr3:81458419-81458438 None:intergenic 45.0%
GCGAACATTTAGGCTCTCTT+TGG + Chr3:81451759-81451778 MsG0380016281.01.T01:intron 45.0%
GGAACTACCAGGGAAAATCA+TGG - Chr3:81457620-81457639 None:intergenic 45.0%
GGAATCACAAAGCAGGTTTC+AGG - Chr3:81453910-81453929 None:intergenic 45.0%
GGAGTTAGACAGGGATTCTT+AGG - Chr3:81453769-81453788 None:intergenic 45.0%
GGCCATATGCTGATGATAGA+GGG + Chr3:81458558-81458577 MsG0380016282.01.T01:exon 45.0%
GGGAGGTTGTTCAAATCCAT+AGG + Chr3:81452393-81452412 MsG0380016281.01.T01:intron 45.0%
GGTATGTCAAACTGGCTACA+AGG + Chr3:81456590-81456609 MsG0380016282.01.T01:intron 45.0%
GGTTGAAAACGTGGTGTGTT+TGG + Chr3:81456889-81456908 MsG0380016282.01.T01:intron 45.0%
GTAGCTCAAGTGGTTGAACT+TGG + Chr3:81452223-81452242 MsG0380016281.01.T01:intron 45.0%
GTAGGTCAATTAAACCGGGA+CGG + Chr3:81451233-81451252 MsG0380016281.01.T01:intron 45.0%
TAAGCAGCATTTGTCGTCGA+TGG - Chr3:81451502-81451521 None:intergenic 45.0%
TACAGTTATCTTTCTCGCGG+AGG + Chr3:81453607-81453626 MsG0380016281.01.T01:intron 45.0%
TAGAGGGCTGGAGTTGAATT+CGG + Chr3:81458574-81458593 MsG0380016282.01.T01:exon 45.0%
TCCGCGAGAAAGATAACTGT+AGG - Chr3:81453608-81453627 None:intergenic 45.0%
TCTTAAGCTTGGCCTGTGTA+AGG + Chr3:81454365-81454384 MsG0380016281.01.T01:intron 45.0%
TGGAGTTATGCTCCTTACAC+AGG - Chr3:81454380-81454399 None:intergenic 45.0%
TGGCCATATGCTGATGATAG+AGG + Chr3:81458557-81458576 MsG0380016282.01.T01:exon 45.0%
TGGTGCTTGATGTTTGTCCT+GGG + Chr3:81454487-81454506 MsG0380016281.01.T01:intron 45.0%
TGTACTCCACCAAATTCTGC+AGG + Chr3:81458375-81458394 MsG0380016282.01.T01:intron 45.0%
TGTTTCTCGACTGACCCATT+TGG + Chr3:81455088-81455107 MsG0380016281.01.T01:intron 45.0%
TTCAACTGCCCCTTCTATGT+TGG + Chr3:81456569-81456588 MsG0380016282.01.T01:CDS 45.0%
TTCTATCTCTCCCAACTTCC+TGG + Chr3:81452869-81452888 MsG0380016281.01.T01:intron 45.0%
TTTCCACCTGCAGAATTTGG+TGG - Chr3:81458384-81458403 None:intergenic 45.0%
TTTGGTTGTGGAAGAGAGGT+TGG + Chr3:81456113-81456132 MsG0380016282.01.T01:intron 45.0%
TTTGTAACTGTGTGTGGTGG+GGG + Chr3:81452919-81452938 MsG0380016281.01.T01:intron 45.0%
! AAATGTGGGCTGAGTTCACT+TGG - Chr3:81454587-81454606 None:intergenic 45.0%
! AACAGAGCCATGATTTTCCC+TGG + Chr3:81457610-81457629 MsG0380016282.01.T01:intron 45.0%
! AATATGTACATGATGGGGGG+TGG - Chr3:81457951-81457970 None:intergenic 45.0%
! CCACTGTGACCAACCATTTT+AGG - Chr3:81453533-81453552 None:intergenic 45.0%
! CCTAAAATGGTTGGTCACAG+TGG + Chr3:81453530-81453549 MsG0380016281.01.T01:intron 45.0%
! CTTGCCTTCAATCTAGCTTG+AGG - Chr3:81454157-81454176 None:intergenic 45.0%
! GATATTGTGGAATGGTGGAG+AGG - Chr3:81452771-81452790 None:intergenic 45.0%
! GGGAAAATCATGGCTCTGTT+TGG - Chr3:81457610-81457629 None:intergenic 45.0%
! TCACAACAACTATGGTGGTG+AGG + Chr3:81453675-81453694 MsG0380016281.01.T01:intron 45.0%
! TTAGACACGGGGAAGAGTAT+TGG + Chr3:81455261-81455280 MsG0380016281.01.T01:CDS 45.0%
!! GACAACATTTTGACAGCTGG+TGG - Chr3:81456457-81456476 None:intergenic 45.0%
!! TAGACACGGGGAAGAGTATT+GGG + Chr3:81455262-81455281 MsG0380016281.01.T01:CDS 45.0%
!! TTGAAATATTATTAAAAAAT+AGG - Chr3:81455809-81455828 None:intergenic 5.0%
!!! AGTTTTTTTTTTTTTTTTAT+GGG - Chr3:81457091-81457110 None:intergenic 5.0%
AAACATAGCCATGATCGGGC+TGG + Chr3:81453341-81453360 MsG0380016281.01.T01:CDS 50.0%
ACCACTTGAGCTACACCTTG+GGG - Chr3:81452217-81452236 None:intergenic 50.0%
ACTCCACCAAATTCTGCAGG+TGG + Chr3:81458378-81458397 MsG0380016282.01.T01:intron 50.0%
ACTGACCCTAGGCATAAGCT+CGG - Chr3:81451529-81451548 None:intergenic 50.0%
AGAGCTACGGAAACTGGAGA+AGG + Chr3:81451358-81451377 MsG0380016281.01.T01:CDS 50.0%
AGTTATCTTTCTCGCGGAGG+GGG + Chr3:81453610-81453629 MsG0380016281.01.T01:intron 50.0%
ATAGGTCGGTTATTCCGGGA+CGG - Chr3:81451051-81451070 None:intergenic 50.0%
CAACCACTTGAGCTACACCT+TGG - Chr3:81452219-81452238 None:intergenic 50.0%
CAGTTATCTTTCTCGCGGAG+GGG + Chr3:81453609-81453628 MsG0380016281.01.T01:intron 50.0%
CTGGTGCTTGATGTTTGTCC+TGG + Chr3:81454486-81454505 MsG0380016281.01.T01:intron 50.0%
GAGAGGTTGGAGTGATATGG+AGG + Chr3:81456126-81456145 MsG0380016282.01.T01:intron 50.0%
GAGTATCTTCTAGTCCCCCA+AGG + Chr3:81452199-81452218 MsG0380016281.01.T01:intron 50.0%
GGAATACACCACGTACCAAG+AGG - Chr3:81458420-81458439 None:intergenic 50.0%
GTCAATTAAACCGGGACGGA+GGG + Chr3:81451237-81451256 MsG0380016281.01.T01:intron 50.0%
GTGGTGAAGTTACTGACCCT+AGG - Chr3:81451540-81451559 None:intergenic 50.0%
TACTATTGGGTCGAAGACGG+TGG - Chr3:81453649-81453668 None:intergenic 50.0%
TGCTTGATGTTTGTCCTGGG+TGG + Chr3:81454490-81454509 MsG0380016281.01.T01:intron 50.0%
TGGAGTGATATGGAGGTCAC+AGG + Chr3:81456133-81456152 MsG0380016282.01.T01:intron 50.0%
TTGATGTTTGTCCTGGGTGG+TGG + Chr3:81454493-81454512 MsG0380016281.01.T01:intron 50.0%
! AAAGCAGGTTTCAGGTGGCT+TGG - Chr3:81453902-81453921 None:intergenic 50.0%
! AACGATTCTAAGGGCAGGCT+TGG - Chr3:81451961-81451980 None:intergenic 50.0%
! AAGGTATCAGAGCACCCTCT+TGG + Chr3:81458402-81458421 MsG0380016282.01.T01:exon 50.0%
! ACTGGAGAAGGTACAACGCA+TGG + Chr3:81451370-81451389 MsG0380016281.01.T01:CDS 50.0%
! ATGGTTGGTCACAGTGGATG+TGG + Chr3:81453536-81453555 MsG0380016281.01.T01:intron 50.0%
! TGAATCTGGTTTGAAGGCCG+AGG + Chr3:81455628-81455647 MsG0380016281.01.T01:intron 50.0%
! TGGCTTCGGCACATCTTTTC+TGG - Chr3:81458293-81458312 None:intergenic 50.0%
! TGGTTGGTCACAGTGGATGT+GGG + Chr3:81453537-81453556 MsG0380016281.01.T01:intron 50.0%
!! GCGATAAGGTGGTTTGGTTG+TGG + Chr3:81456101-81456120 MsG0380016282.01.T01:intron 50.0%
!! GTGGTTTGGTTGTGGAAGAG+AGG + Chr3:81456109-81456128 MsG0380016282.01.T01:intron 50.0%
AGCATTTGTCGTCGATGGCG+AGG - Chr3:81451497-81451516 None:intergenic 55.0%
CATGGAATCCAGCCCGATCA+TGG - Chr3:81453352-81453371 None:intergenic 55.0%
CCACTTGAGCTACACCTTGG+GGG - Chr3:81452216-81452235 None:intergenic 55.0%
GAAGGCCGAGGAGTTGCATA+TGG + Chr3:81455640-81455659 MsG0380016281.01.T01:intron 55.0%
GGTCAATTAAACCGGGACGG+AGG + Chr3:81451236-81451255 MsG0380016281.01.T01:intron 55.0%
GTGATAGATGAGGGTGGCGT+GGG + Chr3:81454750-81454769 MsG0380016281.01.T01:intron 55.0%
GTTATCTTTCTCGCGGAGGG+GGG + Chr3:81453611-81453630 MsG0380016281.01.T01:intron 55.0%
TCCAACTCTTCAACTCCCCC+AGG + Chr3:81456156-81456175 MsG0380016282.01.T01:intron 55.0%
TCCTGGGGGAGTTGAAGAGT+TGG - Chr3:81456160-81456179 None:intergenic 55.0%
TGTGCCGAAGCCACTGAAGA+AGG + Chr3:81458300-81458319 MsG0380016282.01.T01:CDS 55.0%
TTATCTTTCTCGCGGAGGGG+GGG + Chr3:81453612-81453631 MsG0380016281.01.T01:intron 55.0%
TTTGAGAAACGTGGTCGCGC+TGG + Chr3:81451309-81451328 MsG0380016281.01.T01:intron 55.0%
! ATGTTTGTCCTGGGTGGTGG+TGG + Chr3:81454496-81454515 MsG0380016281.01.T01:intron 55.0%
! CGGGCTGGATTCCATGCAAA+AGG + Chr3:81453356-81453375 MsG0380016281.01.T01:CDS 55.0%
!!! GGTGGCGTGGGCCATTTTTT+CGG + Chr3:81454762-81454781 MsG0380016281.01.T01:intron 55.0%
CCCCCAAGGTGTAGCTCAAG+TGG + Chr3:81452213-81452232 MsG0380016281.01.T01:intron 60.0%
GGTGATAGATGAGGGTGGCG+TGG + Chr3:81454749-81454768 MsG0380016281.01.T01:intron 60.0%
TATCTTTCTCGCGGAGGGGG+GGG + Chr3:81453613-81453632 MsG0380016281.01.T01:intron 60.0%
TTGGGTCGAAGACGGTGGTC+AGG - Chr3:81453644-81453663 None:intergenic 60.0%
! ATGATGGGGGGTGGAGTGGA+AGG - Chr3:81457942-81457961 None:intergenic 60.0%
! CAGAGCACCCTCTTGGTACG+TGG + Chr3:81458409-81458428 MsG0380016282.01.T01:exon 60.0%
! GTACATGATGGGGGGTGGAG+TGG - Chr3:81457946-81457965 None:intergenic 60.0%
!! TGGTCGCGCTGGTTGTGTGA+GGG + Chr3:81451320-81451339 MsG0380016281.01.T01:CDS 60.0%
TCGATGGCGAGGTCACCGCA+AGG - Chr3:81451486-81451505 None:intergenic 65.0%
!! GTGGTCGCGCTGGTTGTGTG+AGG + Chr3:81451319-81451338 MsG0380016281.01.T01:CDS 65.0%
CGGTGCTTCCACCACCACCC+AGG - Chr3:81454507-81454526 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 81451046 81458623 81451046 ID=MsG0380016282.01;
Chr3 mRNA 81451046 81458623 81451046 ID=MsG0380016282.01.T01;Parent=MsG0380016282.01
Chr3 exon 81451046 81451441 81451046 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81451353 81451441 81451353 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 CDS 81451531 81451542 81451531 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81451531 81451542 81451531 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81451641 81451721 81451641 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81451641 81451721 81451641 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81452415 81452466 81452415 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81452415 81452466 81452415 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81453128 81453213 81453128 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81453128 81453213 81453128 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81453302 81453401 81453302 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81453302 81453401 81453302 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81453955 81454117 81453955 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81453955 81454117 81453955 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81454651 81454688 81454651 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81454651 81454688 81454651 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81454913 81454925 81454913 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81454913 81454925 81454913 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81455068 81455081 81455068 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81455068 81455081 81455068 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81455138 81455154 81455138 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81455138 81455154 81455138 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81455247 81455328 81455247 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81455247 81455328 81455247 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81455438 81455530 81455438 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81455438 81455530 81455438 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81455644 81455708 81455644 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81455644 81455708 81455644 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81456421 81456433 81456421 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81456421 81456433 81456421 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81456510 81456590 81456510 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81456510 81456590 81456510 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81458213 81458321 81458213 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81458213 81458321 81458213 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Chr3 CDS 81458397 81458497 81458397 ID=MsG0380016282.01.T01.cds;Parent=MsG0380016282.01.T01
Chr3 exon 81458397 81458623 81458397 ID=MsG0380016282.01.T01.exon;Parent=MsG0380016282.01.T01
Gene Sequence

>MsG0380016282.01.T01

ATGGAAGAGCTACGGAAACTGGAGAAGGTACAACGCATGGTTTCATTCATGGATTCTCACGCGTTTCTTTTCAAACTCCGATCATCACTCTTATGCCTAGGATTTCTTCTCCGTTTGTTGAGGATGCGTATCAACAAGTTGTTGCAGAACAAGAGAGTAATGGTAATTTCATTTTTAATTTTGTTCTTATTCTCAGGAACGATGTTCTCGAGAATATTATTCACAAATATATTGGGCGGGAATCACGTGCCGTTCACTGCTGTCTTTACCATTGCGCATATCAATATTCAAATATCACATTTCATGGTTTTCATTCTTATTCAGATGAAAAATAATAATTTATTGCATGGATATAATGAAAACATAGCCATGATCGGGCTGGATTCCATGCAAAAGGCAAATTCTACCCTTGAGGATTTTTGCAGATCATATTTTATGTTTCATGGATTGGATGTAAGCAAGCCACAATCGATCTTCAAATTCTTACCTATTCTTTCATTCACAGAGAGCTATATTTATCAGGTACATGCTAGATTGGTGTCATTCAATTCGTTGACCCTTTCATTCCTAAACTGGTTCTACTACACTCACATTTCTATGCACTTGTTTCAGTGTTTCAGACTGTTATCATGCACAACACAAAATTTGGGTCTTTTGACTGAAAGGATAACTGAAGAACTTAGACACGGGGAAGAGTATTGGGCCCTTGAAAGAAAGCTCTGTCATGCACTGATAAACGAAGAAGAGATTCTTATTGATGATGTGATGAAGGCTATTCATTTAAAGTCTTTTGATTATCGAGTGCTGAATCTTCTTCTCTATCAACTGCAAGGAGCTAAGGCCGAGGAGTTGCATATGGAGTTTCTTTCAATTTCAGAGTTCTTGGTGGAAGTTTCTGATGATCTGTATGACTATGAGGATGATGTTTTAGAAAATAATTTCAACGTTTTGCGCATGTTTATCAGAATATATGGAGCTTCAACTGCCCCTTCTATGTTGGCAAAGTGCATTACTGAGGCTGAAAGTAAGTACACAAGTCTACTGGAATTACTGGAACCAAAGTTATCTCTGAGCTACCAGAAAAGATGTGCCGAAGCCACTGAAGAAGGTGGAAAGGTATCAGAGCACCCTCTTGGTACGTGGTGTATTCCAACTGTGATTCAAGATGAGGAATTGTATAGATCAAACTTGAAATCAGATACTTCGTAA
Protein sequence

>MsG0380016282.01.T01

MEELRKLEKVQRMVSFMDSHAFLFKLRSSLLCLGFLLRLLRMRINKLLQNKRVMVISFLILFLFSGTMFSRILFTNILGGNHVPFTAVFTIAHINIQISHFMVFILIQMKNNNLLHGYNENIAMIGLDSMQKANSTLEDFCRSYFMFHGLDVSKPQSIFKFLPILSFTESYIYQVHARLVSFNSLTLSFLNWFYYTHISMHLFQCFRLLSCTTQNLGLLTERITEELRHGEEYWALERKLCHALINEEEILIDDVMKAIHLKSFDYRVLNLLLYQLQGAKAEELHMEFLSISEFLVEVSDDLYDYEDDVLENNFNVLRMFIRIYGASTAPSMLAKCITEAESKYTSLLELLEPKLSLSYQKRCAEATEEGGKVSEHPLGTWCIPTVIQDEELYRSNLKSDTS*