AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016736.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016736.01.T01 MTR_3g094270 83.750 320 27 2 1 301 1 314 3.41e-177 496
MsG0380016736.01.T01 MTR_3g094260 74.769 325 67 3 1 311 1 324 1.08e-159 451
MsG0380016736.01.T01 MTR_4g058860 60.127 316 111 3 1 302 1 315 5.61e-125 363
MsG0380016736.01.T01 MTR_2g094640 59.740 308 107 3 1 293 1 306 7.93e-123 358
MsG0380016736.01.T01 MTR_1g026590 34.783 299 172 4 13 292 14 308 3.25e-45 158
MsG0380016736.01.T01 MTR_1291s0010 70.874 103 30 0 1 103 1 103 2.66e-42 143
MsG0380016736.01.T01 MTR_3g095130 34.114 299 173 8 2 282 7 299 1.94e-41 148
MsG0380016736.01.T01 MTR_8g092190 36.000 300 166 9 2 282 7 299 1.84e-40 145
MsG0380016736.01.T01 MTR_5g004620 30.841 321 192 7 4 300 7 321 2.98e-39 143
MsG0380016736.01.T01 MTR_1g098240 33.106 293 180 4 5 282 8 299 1.51e-33 127
MsG0380016736.01.T01 MTR_3g095130 31.687 243 149 5 56 282 9 250 1.49e-30 118
MsG0380016736.01.T01 MTR_5g096310 27.451 306 187 7 10 291 55 349 1.25e-26 109
MsG0380016736.01.T01 MTR_2g038410 25.902 305 193 7 10 291 54 348 7.05e-18 84.3
MsG0380016736.01.T01 MTR_3g072380 24.026 308 190 10 22 298 26 320 4.69e-13 69.7
MsG0380016736.01.T01 MTR_1g030320 23.179 302 192 7 22 294 25 315 2.34e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016736.01.T01 AT1G06890 72.468 316 72 2 1 302 1 315 1.18e-148 424
MsG0380016736.01.T01 AT1G06890 72.468 316 72 2 1 302 1 315 1.18e-148 424
MsG0380016736.01.T01 AT1G06890 72.468 316 72 2 1 302 1 315 1.23e-148 424
MsG0380016736.01.T01 AT1G06890 72.468 316 72 2 1 302 1 315 1.30e-148 424
MsG0380016736.01.T01 AT2G30460 70.886 316 77 2 1 302 1 315 2.84e-146 417
MsG0380016736.01.T01 AT2G30460 70.886 316 77 2 1 302 1 315 2.84e-146 417
MsG0380016736.01.T01 AT2G30460 65.657 297 85 3 20 302 1 294 6.02e-132 380
MsG0380016736.01.T01 AT2G30460 65.657 297 85 3 20 302 1 294 6.02e-132 380
MsG0380016736.01.T01 AT2G30460 65.657 297 85 3 20 302 1 294 6.02e-132 380
MsG0380016736.01.T01 AT2G28315 57.927 328 110 4 1 313 1 315 1.52e-125 363
MsG0380016736.01.T01 AT2G28315 60.784 306 103 3 1 291 1 304 9.32e-125 362
MsG0380016736.01.T01 AT2G30460 68.610 223 55 2 1 209 1 222 9.44e-88 268
MsG0380016736.01.T01 AT1G76670 34.304 309 184 6 4 295 7 313 3.99e-46 161
MsG0380016736.01.T01 AT1G76670 34.304 309 184 6 4 295 7 313 3.99e-46 161
MsG0380016736.01.T01 AT5G42420 32.738 336 198 8 9 325 13 339 8.23e-46 160
MsG0380016736.01.T01 AT1G21070 33.225 307 186 6 3 292 7 311 1.66e-45 159
MsG0380016736.01.T01 AT4G09810 38.112 286 159 6 13 282 16 299 8.65e-45 157
MsG0380016736.01.T01 AT4G39390 32.867 286 176 4 12 282 16 300 1.81e-40 145
MsG0380016736.01.T01 AT4G39390 32.867 286 176 4 12 282 20 304 2.20e-40 145
MsG0380016736.01.T01 AT4G39390 32.867 286 176 4 12 282 20 304 2.20e-40 145
MsG0380016736.01.T01 AT1G34020 35.943 281 162 6 18 282 21 299 3.36e-40 145
MsG0380016736.01.T01 AT1G34020 35.943 281 162 6 18 282 21 299 3.36e-40 145
MsG0380016736.01.T01 AT1G34020 35.943 281 162 6 18 282 21 299 3.36e-40 145
MsG0380016736.01.T01 AT4G09810 37.229 231 129 5 66 282 14 242 6.32e-35 129
MsG0380016736.01.T01 AT5G42420 29.063 320 158 8 12 325 16 272 5.76e-30 116
MsG0380016736.01.T01 AT4G09810 36.667 210 116 5 13 207 16 223 4.38e-25 102
MsG0380016736.01.T01 AT5G55950 28.425 292 182 6 10 281 56 340 3.68e-24 102
MsG0380016736.01.T01 AT5G55950 28.866 291 172 7 15 281 1 280 3.92e-23 99.0
MsG0380016736.01.T01 AT5G57100 25.773 291 193 5 10 282 63 348 1.60e-21 95.1
MsG0380016736.01.T01 AT5G55950 28.000 250 159 5 46 281 20 262 8.59e-20 89.4
MsG0380016736.01.T01 AT5G55950 26.749 243 151 6 10 232 56 291 2.76e-14 73.2
MsG0380016736.01.T01 AT5G11230 25.714 315 185 12 9 282 1 307 2.11e-13 70.9
MsG0380016736.01.T01 AT5G25400 25.817 306 193 11 22 301 29 326 6.08e-13 69.7
MsG0380016736.01.T01 AT5G57100 24.066 241 160 5 10 232 63 298 7.24e-13 68.9
MsG0380016736.01.T01 AT5G57100 24.623 199 131 4 98 282 40 233 1.11e-11 65.1
MsG0380016736.01.T01 AT5G57100 32.203 118 76 1 10 123 63 180 2.39e-11 63.9

Find 64 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCGTCTATATACATTTA+TGG 0.124963 3:-87223736 MsG0380016736.01.T01:intron
TTTAGTACATTTCTTGTAAT+TGG 0.131705 3:-87221932 MsG0380016736.01.T01:CDS
TGTTATTTATAGCCTGTTTA+TGG 0.166655 3:-87219851 MsG0380016736.01.T01:CDS
GTTGATAACCGGACCATATT+TGG 0.214078 3:-87222136 MsG0380016736.01.T01:CDS
GAGAAACATACTAGGAATTT+TGG 0.218917 3:-87221813 MsG0380016736.01.T01:CDS
TTATAGCCTGTTTATGGGTT+TGG 0.236720 3:-87219845 MsG0380016736.01.T01:CDS
TATAGCCTGTTTATGGGTTT+GGG 0.259033 3:-87219844 MsG0380016736.01.T01:CDS
ACATGTCTTGTACTGGCTTT+TGG 0.278525 3:-87221866 MsG0380016736.01.T01:CDS
CAGAAAGCGGTGATGGGATT+TGG 0.280505 3:-87224015 MsG0380016736.01.T01:CDS
AACAAGGTTGCTGCCTGATA+TGG 0.285190 3:+87222156 None:intergenic
GTAAGGAATACTAGGATTCT+AGG 0.298436 3:-87219916 MsG0380016736.01.T01:CDS
AACTGCAGCACAAGCATTAC+AGG 0.298578 3:-87221723 MsG0380016736.01.T01:CDS
TGGGTTGTTAAATTTGAGTC+TGG 0.300848 3:-87223971 MsG0380016736.01.T01:CDS
CTGTTTATGGGTTTGGGCTT+TGG 0.319356 3:-87219838 MsG0380016736.01.T01:CDS
AGTATGTTTCTCCAACTAAA+AGG 0.331771 3:+87221824 None:intergenic
GGGTTTGGGCTTTGGTTGCT+TGG 0.337082 3:-87219830 MsG0380016736.01.T01:CDS
TTGCTTGGTTTCCAAGCAAC+CGG 0.346810 3:-87219815 None:intergenic
GTTATTTATAGCCTGTTTAT+GGG 0.350941 3:-87219850 MsG0380016736.01.T01:CDS
CCAAGGACTTGGTAGGTAAC+TGG 0.383495 3:+87221899 None:intergenic
TTCATGTCTTATTTCTATCT+CGG 0.391540 3:-87221960 MsG0380016736.01.T01:CDS
ATATCAATCATGTCCATATC+AGG 0.392944 3:-87222169 MsG0380016736.01.T01:CDS
AATACTAGGATTCTAGGGTT+TGG 0.407935 3:-87219910 MsG0380016736.01.T01:CDS
GGGTTGTTAAATTTGAGTCT+GGG 0.441493 3:-87223970 MsG0380016736.01.T01:CDS
AGTCTGGGTTTCAATTCTGT+TGG 0.443753 3:-87223955 MsG0380016736.01.T01:CDS
CAATTCTGTTGGATTCTACC+AGG 0.443860 3:-87223944 MsG0380016736.01.T01:intron
GTGCACCGATAGTTCCCAAT+TGG 0.446550 3:+87225175 None:intergenic
ATCACCGCTTTCTGCTCAAA+AGG 0.450801 3:+87224024 None:intergenic
AAATGTATATAGACGATAAG+AGG 0.459759 3:+87223740 None:intergenic
CAAAGCCCAAACCCATAAAC+AGG 0.463471 3:+87219839 None:intergenic
ACGCTAATACCCCGGTTGCT+TGG 0.464155 3:+87219804 None:intergenic
TCTTAAGATGTCCAAGGACT+TGG 0.466403 3:+87221888 None:intergenic
TTCTGAATGGAATCTCGATT+GGG 0.468543 3:-87223990 MsG0380016736.01.T01:CDS
ATTCTGAATGGAATCTCGAT+TGG 0.469832 3:-87223991 MsG0380016736.01.T01:CDS
GCAGCAACCTTGTTGATAAC+CGG 0.471022 3:-87222147 MsG0380016736.01.T01:CDS
CAGAACAACAAAGAATAAGA+TGG 0.478271 3:-87225214 MsG0380016736.01.T01:exon
CCAGTTACCTACCAAGTCCT+TGG 0.485286 3:-87221899 MsG0380016736.01.T01:CDS
CAGCTACAACATTGACAAGT+TGG 0.486149 3:-87224110 MsG0380016736.01.T01:CDS
AATTCCGTGTACTATTCTAC+TGG 0.494484 3:-87223802 MsG0380016736.01.T01:CDS
TGCTTGGTTTCCAAGCAACC+GGG 0.495406 3:-87219814 None:intergenic
TTTAGTTGGAGAAACATACT+AGG 0.501343 3:-87221821 MsG0380016736.01.T01:CDS
ATGGGATTTGGAATTCTGAA+TGG 0.502641 3:-87224003 MsG0380016736.01.T01:CDS
TCTTAAGACATGTCTTGTAC+TGG 0.504547 3:-87221873 MsG0380016736.01.T01:CDS
GATTCTCAAGAATGCAAAAG+TGG 0.512823 3:+87221762 None:intergenic
AAAGTACGGTAAGGAATACT+AGG 0.529865 3:-87219924 MsG0380016736.01.T01:CDS
AAATTCCAATTGGGAACTAT+CGG 0.532072 3:-87225180 MsG0380016736.01.T01:CDS
ATGCATTCAGATGACAAAGT+TGG 0.545812 3:-87223829 MsG0380016736.01.T01:intron
TTTGAGCAGAAAGCGGTGAT+GGG 0.547487 3:-87224021 MsG0380016736.01.T01:CDS
TAAGGAATACTAGGATTCTA+GGG 0.548427 3:-87219915 MsG0380016736.01.T01:CDS
AGAACAACAAAGAATAAGAT+GGG 0.562556 3:-87225213 MsG0380016736.01.T01:exon
CACTCTTGAGAGCAGTCTCA+AGG 0.581510 3:+87219872 None:intergenic
ACTGTACTTGCAGAAAAGTA+CGG 0.582016 3:-87219938 MsG0380016736.01.T01:intron
ACTTGCAGAAAAGTACGGTA+AGG 0.584725 3:-87219933 MsG0380016736.01.T01:intron
TGGTGTTTGTCATCTGAAGT+CGG 0.595577 3:+87222229 None:intergenic
ATTCTCAAGAATGCAAAAGT+GGG 0.604113 3:+87221763 None:intergenic
ATATGGTCCGGTTATCAACA+AGG 0.616786 3:+87222140 None:intergenic
CAAGTACACAACACAAGTGA+CGG 0.633666 3:-87222079 MsG0380016736.01.T01:intron
GTCGATTGTGATTTGTAACA+AGG 0.635859 3:-87225127 MsG0380016736.01.T01:CDS
CGGTGCACTAAGTCTATCTG+TGG 0.644881 3:-87225160 MsG0380016736.01.T01:CDS
ATACATAAGCATCCCAACCA+TGG 0.648173 3:+87221787 None:intergenic
AATAAGACATGAAAGAACGA+TGG 0.661070 3:+87221970 None:intergenic
AAGATGTCCAAGGACTTGGT+AGG 0.668600 3:+87221892 None:intergenic
ATCTCCAGTAGAATAGTACA+CGG 0.681945 3:+87223798 None:intergenic
GCTTGGTTTCCAAGCAACCG+GGG 0.702326 3:-87219813 None:intergenic
GACATGTCTTAAGATGTCCA+AGG 0.714030 3:+87221882 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTCATATGTATATAAA+TGG - Chr3:87223778-87223797 MsG0380016736.01.T01:CDS 10.0%
!! ATGAAAAAAAATATGATATT+AGG + Chr3:87220577-87220596 None:intergenic 10.0%
!! TAAAAGTAATATTGATAAAA+TGG + Chr3:87221905-87221924 None:intergenic 10.0%
!! TAAATTATTAAGGTTATTAT+TGG - Chr3:87221963-87221982 MsG0380016736.01.T01:CDS 10.0%
!! TTAAAGATAAAAAAAAAATG+AGG - Chr3:87224310-87224329 MsG0380016736.01.T01:intron 10.0%
!!! AAAAATGATAATGATAATTT+TGG + Chr3:87221761-87221780 None:intergenic 10.0%
!!! ATTATCATTATCATTTTTTA+TGG - Chr3:87221763-87221782 MsG0380016736.01.T01:CDS 10.0%
!!! TTTTCATTTATACTTTATTT+TGG - Chr3:87224411-87224430 MsG0380016736.01.T01:intron 10.0%
!! AAAATGGAAAAAGAAATAAA+AGG - Chr3:87224468-87224487 MsG0380016736.01.T01:intron 15.0%
!! AAATGGAAAAAGAAATAAAA+GGG - Chr3:87224469-87224488 MsG0380016736.01.T01:intron 15.0%
!! AACTAACATTATATTATTAC+GGG - Chr3:87223676-87223695 MsG0380016736.01.T01:intron 15.0%
!! ATCGTTAAAATAATTTCATA+AGG + Chr3:87222377-87222396 None:intergenic 15.0%
!! CAACTAACATTATATTATTA+CGG - Chr3:87223675-87223694 MsG0380016736.01.T01:intron 15.0%
!! TAAACACAAAAAATAGATAA+TGG + Chr3:87221550-87221569 None:intergenic 15.0%
!! TACTCAAAATTTAAATATCA+TGG - Chr3:87223602-87223621 MsG0380016736.01.T01:intron 15.0%
!!! TAGATAATTTAATTTAAACG+AGG - Chr3:87220091-87220110 MsG0380016736.01.T01:intron 15.0%
!!! TATCATAAGAACAATTTTAT+AGG + Chr3:87222453-87222472 None:intergenic 15.0%
!!! TTTTTATTTGCAATTTGATA+TGG - Chr3:87219977-87219996 MsG0380016736.01.T01:intron 15.0%
!! AAAATATTAAAAAGGAACGA+AGG - Chr3:87222062-87222081 MsG0380016736.01.T01:intron 20.0%
!! AACTATAAAATGTTTGAGTA+TGG + Chr3:87221621-87221640 None:intergenic 20.0%
!! AATGGAAAAAGAAATAAAAG+GGG - Chr3:87224470-87224489 MsG0380016736.01.T01:intron 20.0%
!! ACAAAAGTAACAAAGTTAAT+TGG - Chr3:87222005-87222024 MsG0380016736.01.T01:intron 20.0%
!! ATTTACTTTAATCGACAATA+AGG + Chr3:87220336-87220355 None:intergenic 20.0%
!! CAAAATAAAATCTATGAATG+CGG + Chr3:87220755-87220774 None:intergenic 20.0%
!! CAATATGATAGTTTCAAAAA+AGG + Chr3:87224138-87224157 None:intergenic 20.0%
!! CAGTAAATACTTTAATAGTT+AGG + Chr3:87220672-87220691 None:intergenic 20.0%
!! CCAATTAGTTAAAATTCAAA+TGG + Chr3:87223954-87223973 None:intergenic 20.0%
!! GAAATTGAGATAATTGTAAA+TGG + Chr3:87221365-87221384 None:intergenic 20.0%
!! TAAAGTATAAATGAAAACCA+AGG + Chr3:87224408-87224427 None:intergenic 20.0%
!! TATTTGTCAACATTTCATAA+GGG - Chr3:87224281-87224300 MsG0380016736.01.T01:intron 20.0%
!! TTATCGTCTATATACATTTA+TGG - Chr3:87221291-87221310 MsG0380016736.01.T01:intron 20.0%
!! TTATTTGTCAACATTTCATA+AGG - Chr3:87224280-87224299 MsG0380016736.01.T01:intron 20.0%
!! TTTAGTACATTTCTTGTAAT+TGG - Chr3:87223095-87223114 MsG0380016736.01.T01:intron 20.0%
!!! ACTTATATTTTCTCTTGTTA+TGG - Chr3:87222559-87222578 MsG0380016736.01.T01:intron 20.0%
!!! ATATAAGATCTTTTTTGTTC+CGG + Chr3:87220400-87220419 None:intergenic 20.0%
!!! ATTAAAGTATTTACTGGATT+TGG - Chr3:87220676-87220695 MsG0380016736.01.T01:intron 20.0%
!!! ATTTTAAAGAAAAAGACACA+CGG + Chr3:87224563-87224582 None:intergenic 20.0%
!!! CCATTTGAATTTTAACTAAT+TGG - Chr3:87223951-87223970 MsG0380016736.01.T01:CDS 20.0%
!!! CTAACTATTAAAGTATTTAC+TGG - Chr3:87220670-87220689 MsG0380016736.01.T01:intron 20.0%
!!! GCATTCATAGATTTTATTTT+GGG - Chr3:87220754-87220773 MsG0380016736.01.T01:intron 20.0%
!!! TTAAAGTATTTACTGGATTT+GGG - Chr3:87220677-87220696 MsG0380016736.01.T01:intron 20.0%
!!! TTGAATTTTAACTAATTGGA+GGG - Chr3:87223955-87223974 MsG0380016736.01.T01:CDS 20.0%
!!! TTTGAATTTTAACTAATTGG+AGG - Chr3:87223954-87223973 MsG0380016736.01.T01:CDS 20.0%
! AAAAAGAAATAAAAGGGGTA+TGG - Chr3:87224475-87224494 MsG0380016736.01.T01:intron 25.0%
! AAAATAAAAACTCACATGCT+AGG + Chr3:87224515-87224534 None:intergenic 25.0%
! AAATGTATATAGACGATAAG+AGG + Chr3:87221290-87221309 None:intergenic 25.0%
! AAGGTATATATAAGGATTAG+AGG - Chr3:87224768-87224787 MsG0380016736.01.T01:intron 25.0%
! AATATGATATTAGGTCACAT+CGG + Chr3:87220568-87220587 None:intergenic 25.0%
! ACAAAGTTAATTGGTTACTT+TGG - Chr3:87222014-87222033 MsG0380016736.01.T01:intron 25.0%
! ATAAAACACGATTAAGACAA+AGG - Chr3:87224725-87224744 MsG0380016736.01.T01:intron 25.0%
! ATAAATGAAAACCAAGGAAA+TGG + Chr3:87224402-87224421 None:intergenic 25.0%
! ATAAGTTTGAATGTTTGATG+AGG - Chr3:87220248-87220267 MsG0380016736.01.T01:intron 25.0%
! ATTAGAACTTATCATCAACA+AGG + Chr3:87220284-87220303 None:intergenic 25.0%
! ATTTAGTATTCTCATGAACT+AGG - Chr3:87224940-87224959 MsG0380016736.01.T01:intron 25.0%
! CCATGATAAAACTAATTGAA+TGG + Chr3:87220635-87220654 None:intergenic 25.0%
! GATAGAGAAAAATTCCAATT+GGG - Chr3:87219838-87219857 MsG0380016736.01.T01:CDS 25.0%
! GTTATTTATAGCCTGTTTAT+GGG - Chr3:87225177-87225196 MsG0380016736.01.T01:CDS 25.0%
! TAAAACACGATTAAGACAAA+GGG - Chr3:87224726-87224745 MsG0380016736.01.T01:intron 25.0%
! TAAGAATAGTATATCCTTAG+TGG - Chr3:87223550-87223569 MsG0380016736.01.T01:intron 25.0%
! TAAGGATATACTATTCTTAG+TGG + Chr3:87223549-87223568 None:intergenic 25.0%
! TAAGTTTGAATGTTTGATGA+GGG - Chr3:87220249-87220268 MsG0380016736.01.T01:intron 25.0%
! TAATATTGATAAAATGGCAG+AGG + Chr3:87221899-87221918 None:intergenic 25.0%
! TATCATCAAAGAAAGAAACA+AGG - Chr3:87225003-87225022 MsG0380016736.01.T01:intron 25.0%
! TATTTGCAATTTGATATGGT+TGG - Chr3:87219981-87220000 MsG0380016736.01.T01:intron 25.0%
! TCTCCATTTCTCAAAATAAA+TGG + Chr3:87221594-87221613 None:intergenic 25.0%
! TGATAGAGAAAAATTCCAAT+TGG - Chr3:87219837-87219856 MsG0380016736.01.T01:CDS 25.0%
! TTAAATTGAGCCAAATTTGT+TGG + Chr3:87223733-87223752 None:intergenic 25.0%
!! AATCCTTTATTGTTGTTGTT+TGG - Chr3:87221135-87221154 MsG0380016736.01.T01:intron 25.0%
!! AATTTTATCCAAATATGGTC+CGG + Chr3:87222902-87222921 None:intergenic 25.0%
!! ACAAGTCTTGTGAAATTTAT+TGG - Chr3:87223905-87223924 MsG0380016736.01.T01:intron 25.0%
!! AGTACATTGCAATTCATTTT+TGG - Chr3:87219931-87219950 MsG0380016736.01.T01:intron 25.0%
!! CAAGAGTGAAATTTTCTTTA+AGG + Chr3:87222282-87222301 None:intergenic 25.0%
!! CTTTTTCCTTATTCCAAATA+GGG + Chr3:87223498-87223517 None:intergenic 25.0%
!! GTGAGAATTTTATCCAAATA+TGG + Chr3:87222907-87222926 None:intergenic 25.0%
!! TCATGGTATTATTCAAGTTT+GGG - Chr3:87223707-87223726 MsG0380016736.01.T01:intron 25.0%
!! TCTTTTTCCTTATTCCAAAT+AGG + Chr3:87223499-87223518 None:intergenic 25.0%
!! TGTTATTTATAGCCTGTTTA+TGG - Chr3:87225176-87225195 MsG0380016736.01.T01:CDS 25.0%
!! TTCATGGTATTATTCAAGTT+TGG - Chr3:87223706-87223725 MsG0380016736.01.T01:intron 25.0%
!! TTGATAGATTTGAGATTCTT+TGG - Chr3:87220115-87220134 MsG0380016736.01.T01:intron 25.0%
!! TTTTATATCCTACGTAGTTA+AGG - Chr3:87220828-87220847 MsG0380016736.01.T01:intron 25.0%
!! TTTTTATGCATATGTTCCAA+GGG + Chr3:87220494-87220513 None:intergenic 25.0%
!! TTTTTCCTTATTCCAAATAG+GGG + Chr3:87223497-87223516 None:intergenic 25.0%
!!! AAGAAACCTTAAACTTTTTC+TGG + Chr3:87222825-87222844 None:intergenic 25.0%
!!! ACTCCATTTATTTTGAGAAA+TGG - Chr3:87221588-87221607 MsG0380016736.01.T01:intron 25.0%
!!! ATCCTTTATTGTTGTTGTTT+GGG - Chr3:87221136-87221155 MsG0380016736.01.T01:intron 25.0%
!!! CCATTCAATTAGTTTTATCA+TGG - Chr3:87220632-87220651 MsG0380016736.01.T01:intron 25.0%
!!! CGCATTCATAGATTTTATTT+TGG - Chr3:87220753-87220772 MsG0380016736.01.T01:intron 25.0%
!!! GTTTTTTTATTGCACACTAT+AGG - Chr3:87224179-87224198 MsG0380016736.01.T01:intron 25.0%
!!! TAAAAGAGTGCTTACATATA+AGG + Chr3:87221442-87221461 None:intergenic 25.0%
!!! TATGTCAAACTTGTTAACTT+AGG + Chr3:87223584-87223603 None:intergenic 25.0%
!!! TTCATGTCTTATTTCTATCT+CGG - Chr3:87223067-87223086 MsG0380016736.01.T01:intron 25.0%
!!! TTTTTTATGCATATGTTCCA+AGG + Chr3:87220495-87220514 None:intergenic 25.0%
AAATATGTTGCTAACAACAC+AGG - Chr3:87222397-87222416 MsG0380016736.01.T01:intron 30.0%
AAATTCCAATTGGGAACTAT+CGG - Chr3:87219847-87219866 MsG0380016736.01.T01:CDS 30.0%
AAGATTGAGAATAGATATCG+AGG + Chr3:87224024-87224043 None:intergenic 30.0%
AATAAGACATGAAAGAACGA+TGG + Chr3:87223060-87223079 None:intergenic 30.0%
AATATGTTGCTAACAACACA+GGG - Chr3:87222398-87222417 MsG0380016736.01.T01:intron 30.0%
AATCTTGAATCCAAAACACA+AGG + Chr3:87224923-87224942 None:intergenic 30.0%
AATTTATCCTATTAGTCCCT+TGG - Chr3:87220475-87220494 MsG0380016736.01.T01:intron 30.0%
AGTATGTTTCTCCAACTAAA+AGG + Chr3:87223206-87223225 None:intergenic 30.0%
ATATCAATCATGTCCATATC+AGG - Chr3:87222858-87222877 MsG0380016736.01.T01:intron 30.0%
ATATGTCATCTCACATACAA+AGG + Chr3:87222521-87222540 None:intergenic 30.0%
ATCTTGAATCCAAAACACAA+GGG + Chr3:87224922-87224941 None:intergenic 30.0%
ATTCTCAAGAATGCAAAAGT+GGG + Chr3:87223267-87223286 None:intergenic 30.0%
CATTTCATTTGAGCATGATT+TGG - Chr3:87222670-87222689 MsG0380016736.01.T01:intron 30.0%
CTTAGGATATAATTCCACTA+AGG + Chr3:87223567-87223586 None:intergenic 30.0%
GAAGTACAATATTGAACAAG+AGG - Chr3:87223470-87223489 MsG0380016736.01.T01:intron 30.0%
GAGACTTGTGAATATCATAA+AGG + Chr3:87221710-87221729 None:intergenic 30.0%
GAGTTTAGAAGAAAATGTCA+GGG - Chr3:87224433-87224452 MsG0380016736.01.T01:intron 30.0%
TAAGGAATACTAGGATTCTA+GGG - Chr3:87225112-87225131 MsG0380016736.01.T01:CDS 30.0%
TAGGATTGCAAGAGAAAATT+GGG + Chr3:87222153-87222172 None:intergenic 30.0%
TATGTCATCTCACATACAAA+GGG + Chr3:87222520-87222539 None:intergenic 30.0%
TGACAAATAAAAAGAAAGCG+TGG + Chr3:87224270-87224289 None:intergenic 30.0%
TGTGTCTTTGTCTTTCTAAA+TGG + Chr3:87221390-87221409 None:intergenic 30.0%
TTACGCGTAAGGTATATATA+AGG - Chr3:87224760-87224779 MsG0380016736.01.T01:intron 30.0%
TTAGATATGTAGACGTCTAA+AGG - Chr3:87220867-87220886 MsG0380016736.01.T01:intron 30.0%
TTTAGTTGGAGAAACATACT+AGG - Chr3:87223206-87223225 MsG0380016736.01.T01:intron 30.0%
! AATGTTTTATGATGCAGAGT+CGG - Chr3:87224672-87224691 MsG0380016736.01.T01:intron 30.0%
! GAGAAACATACTAGGAATTT+TGG - Chr3:87223214-87223233 MsG0380016736.01.T01:intron 30.0%
! TACATTTTGTTCTCTTCATG+TGG - Chr3:87220951-87220970 MsG0380016736.01.T01:intron 30.0%
! TCGCATTATTCTTGTTTGTA+TGG - Chr3:87224046-87224065 MsG0380016736.01.T01:CDS 30.0%
! TCTACATATCTAAGACAAGT+AGG + Chr3:87220860-87220879 None:intergenic 30.0%
! TGTAAGCACTCTTTTATTAG+AGG - Chr3:87221446-87221465 MsG0380016736.01.T01:intron 30.0%
! TTTACCAATAAAAAAGCACG+AGG + Chr3:87223359-87223378 None:intergenic 30.0%
! TTTTCCTTATTCCAAATAGG+GGG + Chr3:87223496-87223515 None:intergenic 30.0%
! TTTTTCTTGGCAAGAAATTC+AGG - Chr3:87221254-87221273 MsG0380016736.01.T01:intron 30.0%
!! AACCTTAAACTTTTTCTGGA+TGG + Chr3:87222821-87222840 None:intergenic 30.0%
!! TTCTTTGGAATCACATCAAA+TGG - Chr3:87220130-87220149 MsG0380016736.01.T01:intron 30.0%
!!! AACTGCTCTAGTTTTTACAA+TGG - Chr3:87222304-87222323 MsG0380016736.01.T01:intron 30.0%
!!! AGCATTTTTTTCCATTTCCT+TGG - Chr3:87224388-87224407 MsG0380016736.01.T01:intron 30.0%
!!! GACTTGCACTATTTTTTGTT+AGG - Chr3:87220203-87220222 MsG0380016736.01.T01:intron 30.0%
!!! TATTCCTCGTGCTTTTTTAT+TGG - Chr3:87223352-87223371 MsG0380016736.01.T01:intron 30.0%
!!! TGAGTTTTTTTTTTCTTCCG+TGG - Chr3:87220019-87220038 MsG0380016736.01.T01:intron 30.0%
AAAGAAAGAAACAAGGAGCT+AGG - Chr3:87225010-87225029 MsG0380016736.01.T01:intron 35.0%
AAAGTACGGTAAGGAATACT+AGG - Chr3:87225103-87225122 MsG0380016736.01.T01:CDS 35.0%
AAATGCGACGAAAGAAACAT+AGG + Chr3:87221823-87221842 None:intergenic 35.0%
AAGAAAGAAACAAGGAGCTA+GGG - Chr3:87225011-87225030 MsG0380016736.01.T01:intron 35.0%
AATGCGACGAAAGAAACATA+GGG + Chr3:87221822-87221841 None:intergenic 35.0%
AATTCCGTGTACTATTCTAC+TGG - Chr3:87221225-87221244 MsG0380016736.01.T01:intron 35.0%
ACACGTACAAAAAAAACACC+TGG + Chr3:87221104-87221123 None:intergenic 35.0%
ACATGGTTGTAAGTTAATCC+CGG + Chr3:87223816-87223835 None:intergenic 35.0%
ACTGTACTTGCAGAAAAGTA+CGG - Chr3:87225089-87225108 MsG0380016736.01.T01:intron 35.0%
ATATGTTCCAAGGGACTAAT+AGG + Chr3:87220485-87220504 None:intergenic 35.0%
ATATTCCAATAACTGACGAG+TGG + Chr3:87224598-87224617 None:intergenic 35.0%
ATCATGAAAAAGCAGATGCA+TGG + Chr3:87220067-87220086 None:intergenic 35.0%
ATCTCCAGTAGAATAGTACA+CGG + Chr3:87221232-87221251 None:intergenic 35.0%
ATGCATTCAGATGACAAAGT+TGG - Chr3:87221198-87221217 MsG0380016736.01.T01:intron 35.0%
ATTCTGAATGGAATCTCGAT+TGG - Chr3:87221036-87221055 MsG0380016736.01.T01:intron 35.0%
CACCATCCAGAAAAAGTTTA+AGG - Chr3:87222816-87222835 MsG0380016736.01.T01:intron 35.0%
CCTGAAAACATTGGAAAACA+AGG + Chr3:87223408-87223427 None:intergenic 35.0%
CTCTCTACAATGCAGAATTT+GGG - Chr3:87224823-87224842 MsG0380016736.01.T01:intron 35.0%
GAGATATTCTAGCAACTCAT+CGG + Chr3:87224359-87224378 None:intergenic 35.0%
GATTCTCAAGAATGCAAAAG+TGG + Chr3:87223268-87223287 None:intergenic 35.0%
GATTTACAACTCAATGCGTT+GGG - Chr3:87222203-87222222 MsG0380016736.01.T01:CDS 35.0%
GGAGTTTAGAAGAAAATGTC+AGG - Chr3:87224432-87224451 MsG0380016736.01.T01:intron 35.0%
GGGTTGTTAAATTTGAGTCT+GGG - Chr3:87221057-87221076 MsG0380016736.01.T01:intron 35.0%
GTAAAATGTGTCATCATTCG+AGG + Chr3:87224113-87224132 None:intergenic 35.0%
GTAAGGAATACTAGGATTCT+AGG - Chr3:87225111-87225130 MsG0380016736.01.T01:CDS 35.0%
GTAGACGTCTAAAGGTTTAA+TGG - Chr3:87220875-87220894 MsG0380016736.01.T01:intron 35.0%
GTAGGATTGCAAGAGAAAAT+TGG + Chr3:87222154-87222173 None:intergenic 35.0%
GTATCAAAGGTTAAGTGTTC+AGG - Chr3:87224630-87224649 MsG0380016736.01.T01:intron 35.0%
GTCTTTGTCTTTCTAAATGG+AGG + Chr3:87221387-87221406 None:intergenic 35.0%
TATAGCCTGTTTATGGGTTT+GGG - Chr3:87225183-87225202 MsG0380016736.01.T01:CDS 35.0%
TATGATATTCACAAGTCTCG+AGG - Chr3:87221711-87221730 MsG0380016736.01.T01:CDS 35.0%
TATTACGGGAAAGAAGTTCA+TGG - Chr3:87223690-87223709 MsG0380016736.01.T01:intron 35.0%
TATTCCAATAACTGACGAGT+GGG + Chr3:87224597-87224616 None:intergenic 35.0%
TCATTCGAGGATTCTGAATT+TGG + Chr3:87224100-87224119 None:intergenic 35.0%
TCTCTCTACAATGCAGAATT+TGG - Chr3:87224822-87224841 MsG0380016736.01.T01:intron 35.0%
TCTTAAGACATGTCTTGTAC+TGG - Chr3:87223154-87223173 MsG0380016736.01.T01:intron 35.0%
TGATTTACAACTCAATGCGT+TGG - Chr3:87222202-87222221 MsG0380016736.01.T01:CDS 35.0%
TGCCCAAACAACAACAATAA+AGG + Chr3:87221141-87221160 None:intergenic 35.0%
TGGGTTGTTAAATTTGAGTC+TGG - Chr3:87221056-87221075 MsG0380016736.01.T01:intron 35.0%
TTATAGCCTGTTTATGGGTT+TGG - Chr3:87225182-87225201 MsG0380016736.01.T01:CDS 35.0%
TTCTGAATGGAATCTCGATT+GGG - Chr3:87221037-87221056 MsG0380016736.01.T01:intron 35.0%
TTTCCAAGACATCGTGTAAT+TGG - Chr3:87221658-87221677 MsG0380016736.01.T01:intron 35.0%
! AAGAAATAAAAGGGGTATGG+AGG - Chr3:87224478-87224497 MsG0380016736.01.T01:intron 35.0%
! AAGCTAAAAGAAGTGTGTTG+AGG + Chr3:87223873-87223892 None:intergenic 35.0%
! ACATATCTAAGACAAGTAGG+AGG + Chr3:87220857-87220876 None:intergenic 35.0%
! AGAGTGCTTACATATAAGGA+CGG + Chr3:87221438-87221457 None:intergenic 35.0%
! ATGGGATTTGGAATTCTGAA+TGG - Chr3:87221024-87221043 MsG0380016736.01.T01:intron 35.0%
! CTACTGGAGATTCTTTTTCT+TGG - Chr3:87221241-87221260 MsG0380016736.01.T01:intron 35.0%
! GTCGATTGTGATTTGTAACA+AGG - Chr3:87219900-87219919 MsG0380016736.01.T01:CDS 35.0%
! TCCATTTTCCACGTTAATGA+GGG + Chr3:87223452-87223471 None:intergenic 35.0%
! TTCCATTTTCCACGTTAATG+AGG + Chr3:87223453-87223472 None:intergenic 35.0%
! TTCTCTTGCAATCCTACTTT+TGG - Chr3:87222157-87222176 MsG0380016736.01.T01:CDS 35.0%
! TTGTACGTGATCCTTTTAGT+TGG - Chr3:87223192-87223211 MsG0380016736.01.T01:intron 35.0%
!! AACTTATCGTCCTTTTCAAG+TGG + Chr3:87222720-87222739 None:intergenic 35.0%
!! AATACTAGGATTCTAGGGTT+TGG - Chr3:87225117-87225136 MsG0380016736.01.T01:CDS 35.0%
!! AATGTTTTCAGGCAAGAGAA+GGG - Chr3:87223416-87223435 MsG0380016736.01.T01:intron 35.0%
!! GCAAAGAGTGCTTACATATA+GGG - Chr3:87221468-87221487 MsG0380016736.01.T01:intron 35.0%
!! TCTCTTGCAATCCTACTTTT+GGG - Chr3:87222158-87222177 MsG0380016736.01.T01:CDS 35.0%
!!! CCTTGTTTTCCAATGTTTTC+AGG - Chr3:87223405-87223424 MsG0380016736.01.T01:intron 35.0%
!!! GATTTTATTTTGGGCACAAG+AGG - Chr3:87220763-87220782 MsG0380016736.01.T01:intron 35.0%
AAATGTCAGGGAGATGTTTG+AGG - Chr3:87224445-87224464 MsG0380016736.01.T01:intron 40.0%
AGGGAGATGTTTGAGGAAAA+TGG - Chr3:87224452-87224471 MsG0380016736.01.T01:intron 40.0%
AGTCTGGGTTTCAATTCTGT+TGG - Chr3:87221072-87221091 MsG0380016736.01.T01:intron 40.0%
ATACATAAGCATCCCAACCA+TGG + Chr3:87223243-87223262 None:intergenic 40.0%
ATATCCCACTCGTCAGTTAT+TGG - Chr3:87224590-87224609 MsG0380016736.01.T01:intron 40.0%
ATATGGTCCGGTTATCAACA+AGG + Chr3:87222890-87222909 None:intergenic 40.0%
CAAGTACACAACACAAGTGA+CGG - Chr3:87222948-87222967 MsG0380016736.01.T01:intron 40.0%
CAAGTTTGGGCCAACAAATT+TGG - Chr3:87223720-87223739 MsG0380016736.01.T01:intron 40.0%
CAATTCCAACACCCAAAAGT+AGG + Chr3:87222172-87222191 None:intergenic 40.0%
CAATTCTGTTGGATTCTACC+AGG - Chr3:87221083-87221102 MsG0380016736.01.T01:intron 40.0%
CAGCTACAACATTGACAAGT+TGG - Chr3:87220917-87220936 MsG0380016736.01.T01:intron 40.0%
CTTCTCTTGCCTGAAAACAT+TGG + Chr3:87223417-87223436 None:intergenic 40.0%
GAATCCAAAACACAAGGGAA+AGG + Chr3:87224917-87224936 None:intergenic 40.0%
GACATGTCTTAAGATGTCCA+AGG + Chr3:87223148-87223167 None:intergenic 40.0%
GCTATGTTGACCACTTGAAA+AGG - Chr3:87222707-87222726 MsG0380016736.01.T01:intron 40.0%
GCTGCTTGATGTACAAATCA+TGG + Chr3:87220378-87220397 None:intergenic 40.0%
GGAAAAAAATGCTGACAGCT+AGG + Chr3:87224381-87224400 None:intergenic 40.0%
GTGTTTGCAAGCTTGATAGA+GGG + Chr3:87224895-87224914 None:intergenic 40.0%
GTTGCTACAATTTCGCTACA+TGG + Chr3:87223833-87223852 None:intergenic 40.0%
TAACCTTTGATACGTTCGAC+TGG + Chr3:87224623-87224642 None:intergenic 40.0%
TCACATACAAAGGGAAGCTT+AGG + Chr3:87222511-87222530 None:intergenic 40.0%
TCTTAAGATGTCCAAGGACT+TGG + Chr3:87223142-87223161 None:intergenic 40.0%
TTACCAGTCGAACGTATCAA+AGG - Chr3:87224617-87224636 MsG0380016736.01.T01:intron 40.0%
TTGCCAATTACACGATGTCT+TGG + Chr3:87221664-87221683 None:intergenic 40.0%
! AACACCTTTCCCTTGTGTTT+TGG - Chr3:87224910-87224929 MsG0380016736.01.T01:intron 40.0%
! ACTTGCAGAAAAGTACGGTA+AGG - Chr3:87225094-87225113 MsG0380016736.01.T01:intron 40.0%
! AGAGTGCTTACATATAGGGA+CGG - Chr3:87221472-87221491 MsG0380016736.01.T01:intron 40.0%
! CCATTTTCCACGTTAATGAG+GGG + Chr3:87223451-87223470 None:intergenic 40.0%
! GGGCTCTTTCTTATCTTTTC+TGG - Chr3:87222223-87222242 MsG0380016736.01.T01:CDS 40.0%
! TGATTTGTACATCAAGCAGC+CGG - Chr3:87220378-87220397 MsG0380016736.01.T01:intron 40.0%
! TGGTGTTTGTCATCTGAAGT+CGG + Chr3:87222801-87222820 None:intergenic 40.0%
!! ACTAGGAATTTTGGTAGCCA+TGG - Chr3:87223223-87223242 MsG0380016736.01.T01:intron 40.0%
!! ATGTTTTCAGGCAAGAGAAG+GGG - Chr3:87223417-87223436 MsG0380016736.01.T01:intron 40.0%
!! CAATGTTTTCAGGCAAGAGA+AGG - Chr3:87223415-87223434 MsG0380016736.01.T01:intron 40.0%
!! CGTTTTGGTATTTACGCGTA+AGG - Chr3:87224749-87224768 MsG0380016736.01.T01:intron 40.0%
!! GAATTTTGGTAGCCATGGTT+GGG - Chr3:87223228-87223247 MsG0380016736.01.T01:intron 40.0%
!! GGCAAAGAGTGCTTACATAT+AGG - Chr3:87221467-87221486 MsG0380016736.01.T01:intron 40.0%
!! GTTGATAACCGGACCATATT+TGG - Chr3:87222891-87222910 MsG0380016736.01.T01:intron 40.0%
!!! ACATGTCTTGTACTGGCTTT+TGG - Chr3:87223161-87223180 MsG0380016736.01.T01:intron 40.0%
!!! GATTAAGACAAAGGGCGTTT+TGG - Chr3:87224734-87224753 MsG0380016736.01.T01:intron 40.0%
AACAAGGTTGCTGCCTGATA+TGG + Chr3:87222874-87222893 None:intergenic 45.0%
AACTGCAGCACAAGCATTAC+AGG - Chr3:87223304-87223323 MsG0380016736.01.T01:intron 45.0%
ACATGCAGTAACAGTCACCA+CGG + Chr3:87220039-87220058 None:intergenic 45.0%
ACTAGGAGCAAGTAGGAACT+TGG - Chr3:87224957-87224976 MsG0380016736.01.T01:intron 45.0%
ATCACCGCTTTCTGCTCAAA+AGG + Chr3:87221006-87221025 None:intergenic 45.0%
ATCTGATCCCCTCATTAACG+TGG - Chr3:87223441-87223460 MsG0380016736.01.T01:intron 45.0%
CAAAGCCCAAACCCATAAAC+AGG + Chr3:87225191-87225210 None:intergenic 45.0%
CCCCTCATTAACGTGGAAAA+TGG - Chr3:87223448-87223467 MsG0380016736.01.T01:intron 45.0%
CTCATGAACTAGGAGCAAGT+AGG - Chr3:87224950-87224969 MsG0380016736.01.T01:intron 45.0%
CTGTTTATGGGTTTGGGCTT+TGG - Chr3:87225189-87225208 MsG0380016736.01.T01:CDS 45.0%
GAAGTGTGTTGAGGAGTGAA+TGG + Chr3:87223864-87223883 None:intergenic 45.0%
GGTGTTTGCAAGCTTGATAG+AGG + Chr3:87224896-87224915 None:intergenic 45.0%
TGCTTACATATAGGGACGGA+TGG - Chr3:87221476-87221495 MsG0380016736.01.T01:intron 45.0%
TTGCAAGCTTGATAGAGGGA+GGG + Chr3:87224891-87224910 None:intergenic 45.0%
TTGCTTGGTTTCCAAGCAAC+CGG - Chr3:87225212-87225231 MsG0380016736.01.T01:exon 45.0%
TTTGAGCAGAAAGCGGTGAT+GGG - Chr3:87221006-87221025 MsG0380016736.01.T01:intron 45.0%
TTTGCAAGCTTGATAGAGGG+AGG + Chr3:87224892-87224911 None:intergenic 45.0%
! AAGATGTCCAAGGACTTGGT+AGG + Chr3:87223138-87223157 None:intergenic 45.0%
! CAAGCCTTTTGAGCAGAAAG+CGG - Chr3:87220999-87221018 MsG0380016736.01.T01:intron 45.0%
! GAGCTAGGGTTTGAAGTTGA+AGG - Chr3:87225025-87225044 MsG0380016736.01.T01:intron 45.0%
! TTTTGAGCAGAAAGCGGTGA+TGG - Chr3:87221005-87221024 MsG0380016736.01.T01:intron 45.0%
!! AGGAGTATCGAGATGCTTAC+TGG - Chr3:87220223-87220242 MsG0380016736.01.T01:intron 45.0%
!! GCAATCCTACTTTTGGGTGT+TGG - Chr3:87222164-87222183 MsG0380016736.01.T01:CDS 45.0%
!! GCAGCAACCTTGTTGATAAC+CGG - Chr3:87222880-87222899 MsG0380016736.01.T01:intron 45.0%
!! GGAATTTTGGTAGCCATGGT+TGG - Chr3:87223227-87223246 MsG0380016736.01.T01:intron 45.0%
!! AAAAATACAAAATATTAAAA+AGG - Chr3:87222054-87222073 MsG0380016736.01.T01:intron 5.0%
!! TACAATATATTAAATTATTA+AGG - Chr3:87221953-87221972 MsG0380016736.01.T01:CDS 5.0%
ATGCAGAGTCGGTTAAGCAC+GGG - Chr3:87224683-87224702 MsG0380016736.01.T01:intron 50.0%
ATGCGTGAGGGATAGAGAGA+AGG + Chr3:87224859-87224878 None:intergenic 50.0%
CACTCTTGAGAGCAGTCTCA+AGG + Chr3:87225158-87225177 None:intergenic 50.0%
CCAGTTACCTACCAAGTCCT+TGG - Chr3:87223128-87223147 MsG0380016736.01.T01:intron 50.0%
CGGTGCACTAAGTCTATCTG+TGG - Chr3:87219867-87219886 MsG0380016736.01.T01:CDS 50.0%
GATGCAGAGTCGGTTAAGCA+CGG - Chr3:87224682-87224701 MsG0380016736.01.T01:intron 50.0%
GGAGGAAGCCTTAACTACGT+AGG + Chr3:87220839-87220858 None:intergenic 50.0%
TGAACAAGAGGCCCCCTATT+TGG - Chr3:87223482-87223501 MsG0380016736.01.T01:intron 50.0%
TGCGTGAGGGATAGAGAGAA+GGG + Chr3:87224858-87224877 None:intergenic 50.0%
TGCTTGGTTTCCAAGCAACC+GGG - Chr3:87225213-87225232 MsG0380016736.01.T01:exon 50.0%
! CCAAGGACTTGGTAGGTAAC+TGG + Chr3:87223131-87223150 None:intergenic 50.0%
! GAGGCCCCCTATTTGGAATA+AGG - Chr3:87223489-87223508 MsG0380016736.01.T01:intron 50.0%
! GTGCACCGATAGTTCCCAAT+TGG + Chr3:87219855-87219874 None:intergenic 50.0%
!! CAGAAAGCGGTGATGGGATT+TGG - Chr3:87221012-87221031 MsG0380016736.01.T01:intron 50.0%
AGGGAGAGAGAGAATGCGTG+AGG + Chr3:87224872-87224891 None:intergenic 55.0%
GGGAGAGAGAGAATGCGTGA+GGG + Chr3:87224871-87224890 None:intergenic 55.0%
! GGGTTTGGGCTTTGGTTGCT+TGG - Chr3:87225197-87225216 MsG0380016736.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr3 gene 87219816 87225233 87219816 ID=MsG0380016736.01;Name=MsG0380016736.01
Chr3 mRNA 87219816 87225233 87219816 ID=MsG0380016736.01.T01;Parent=MsG0380016736.01;Name=MsG0380016736.01.T01;_AED=0.49;_eAED=0.60;_QI=16|0|0|1|0.4|0.33|6|0|361
Chr3 exon 87225097 87225233 87225097 ID=MsG0380016736.01.T01:exon:22107;Parent=MsG0380016736.01.T01
Chr3 exon 87223945 87224129 87223945 ID=MsG0380016736.01.T01:exon:22106;Parent=MsG0380016736.01.T01
Chr3 exon 87223737 87223841 87223737 ID=MsG0380016736.01.T01:exon:22105;Parent=MsG0380016736.01.T01
Chr3 exon 87222080 87222298 87222080 ID=MsG0380016736.01.T01:exon:22104;Parent=MsG0380016736.01.T01
Chr3 exon 87221676 87221996 87221676 ID=MsG0380016736.01.T01:exon:22103;Parent=MsG0380016736.01.T01
Chr3 exon 87219816 87219947 87219816 ID=MsG0380016736.01.T01:exon:22102;Parent=MsG0380016736.01.T01
Chr3 five_prime_UTR 87225218 87225233 87225218 ID=MsG0380016736.01.T01:five_prime_utr;Parent=MsG0380016736.01.T01
Chr3 CDS 87225097 87225217 87225097 ID=MsG0380016736.01.T01:cds;Parent=MsG0380016736.01.T01
Chr3 CDS 87223945 87224129 87223945 ID=MsG0380016736.01.T01:cds;Parent=MsG0380016736.01.T01
Chr3 CDS 87223737 87223841 87223737 ID=MsG0380016736.01.T01:cds;Parent=MsG0380016736.01.T01
Chr3 CDS 87222080 87222298 87222080 ID=MsG0380016736.01.T01:cds;Parent=MsG0380016736.01.T01
Chr3 CDS 87221676 87221996 87221676 ID=MsG0380016736.01.T01:cds;Parent=MsG0380016736.01.T01
Chr3 CDS 87219816 87219947 87219816 ID=MsG0380016736.01.T01:cds;Parent=MsG0380016736.01.T01
Gene Sequence

>MsG0380016736.01.T01

ATGGGTGATAGAGAAAAATTCCAATTGGGAACTATCGGTGCACTAAGTCTATCTGTGGTGTCATCTGTGTCGATTGTGATTTGTAACAAGGCGTTGATGAGTACATTGCAATTCATTTTTGCTACAACATTGACAAGTTGGCATCTTCTTGTTACATTTTGTTCTCTTCATGTGGCACTAAAAATGAAATTTTTTGAGCACAAGCCTTTTGAGCAGAAAGCGGTGATGGGATTTGGAATTCTGAATGGAATCTCGATTGGGTTGTTAAATTTGAGTCTGGGTTTCAATTCTGTTGGATTCTACCAGATGACAAAGTTGGCAATAATTCCGTGTACTATTCTACTGGAGATTCTTTTTCTTGGCAAGAAATTCAGGTCTCATTTAGCCTCTTATCGTCTATATACATTTATGTGTTATAATTGTTTGTGTTTGTTATGTCTTGTTAAGATCTTAATAAGCCGACTTCAGATGACAAACACCATCCAGAAAAAGTTTAAGGTTTCTTCTACTCAACTTCTATATCAATCATGTCCATATCAGGCAGCAACCTTGTTGATAACCGGACCATATTTGGATAAAATTCTCACTGATCTAAATGTTTTTGCTTTCAAGTACACAACACAAGTGACGTTTGCCATCGTTCTTTCATGTCTTATTTCTATCTCGGTCAACTTTAGTACATTTCTTGTAATTGGAAAGACATCTCCAGTTACCTACCAAGTCCTTGGACATCTTAAGACATGTCTTGTACTGGCTTTTGGTTACATTATTGTACGTGATCCTTTTAGTTGGAGAAACATACTAGGAATTTTGGTAGCCATGGTTGGGATGCTTATGTATTCCCACTTTTGCATTCTTGAGAATCAACAAAAAGCACTTGAAACTGCAGCACAAGCATTACAGGTTTGTTTATTTACAGAGAGCACTTTTATTCCTCGTGCTTTTTTATTGAAAAGTACGGTAAGGAATACTAGGATTCTAGGGTTTGGACTGATGATTAGATGCCTTGAGACTGCTCTCAAGAGTGTTATTTATAGCCTGTTTATGGGTTTGGGCTTTGGTTGCTTGGTTTCCAAGCAACCG
Protein sequence

>MsG0380016736.01.T01

MGDREKFQLGTIGALSLSVVSSVSIVICNKALMSTLQFIFATTLTSWHLLVTFCSLHVALKMKFFEHKPFEQKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTILLEILFLGKKFRSHLASYRLYTFMCYNCLCLLCLVKILISRLQMTNTIQKKFKVSSTQLLYQSCPYQAATLLITGPYLDKILTDLNVFAFKYTTQVTFAIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYIIVRDPFSWRNILGILVAMVGMLMYSHFCILENQQKALETAAQALQVCLFTESTFIPRAFLLKSTVRNTRILGFGLMIRCLETALKSVIYSLFMGLGFGCLVSKQP