Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016784.01.T01 | XP_003602535.2 | 97.253 | 364 | 9 | 1 | 1 | 364 | 1 | 363 | 0 | 721 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016784.01.T01 | Q9FGG3 | 48.747 | 359 | 175 | 4 | 1 | 354 | 1 | 355 | 4.67E-106 | 318 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016784.01.T01 | G7JAW4 | 97.253 | 364 | 9 | 1 | 1 | 364 | 1 | 363 | 0.0 | 721 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0380016784.01 | MsG0880047545.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016784.01.T01 | MTR_3g095420 | 97.253 | 364 | 9 | 1 | 1 | 364 | 1 | 363 | 0.0 | 721 |
| MsG0380016784.01.T01 | MTR_3g095450 | 81.818 | 363 | 62 | 4 | 3 | 364 | 1 | 360 | 0.0 | 591 |
| MsG0380016784.01.T01 | MTR_3g095440 | 82.873 | 362 | 60 | 2 | 3 | 364 | 1 | 360 | 0.0 | 571 |
| MsG0380016784.01.T01 | MTR_3g095440 | 85.659 | 258 | 36 | 1 | 3 | 260 | 1 | 257 | 9.75e-154 | 433 |
| MsG0380016784.01.T01 | MTR_3g095460 | 50.909 | 330 | 158 | 2 | 3 | 332 | 1 | 326 | 1.44e-116 | 342 |
| MsG0380016784.01.T01 | MTR_8g092650 | 51.057 | 331 | 159 | 2 | 3 | 332 | 1 | 329 | 5.03e-109 | 323 |
| MsG0380016784.01.T01 | MTR_6g036450 | 40.483 | 331 | 184 | 5 | 8 | 334 | 17 | 338 | 5.47e-84 | 259 |
| MsG0380016784.01.T01 | MTR_8g092650 | 52.000 | 250 | 119 | 1 | 84 | 332 | 2 | 251 | 3.80e-83 | 254 |
| MsG0380016784.01.T01 | MTR_3g072530 | 33.973 | 365 | 221 | 7 | 3 | 358 | 10 | 363 | 2.07e-73 | 232 |
| MsG0380016784.01.T01 | MTR_3g072500 | 32.394 | 355 | 231 | 4 | 3 | 357 | 16 | 361 | 1.03e-70 | 226 |
| MsG0380016784.01.T01 | MTR_8g041390 | 35.799 | 338 | 208 | 6 | 9 | 342 | 15 | 347 | 1.73e-70 | 226 |
| MsG0380016784.01.T01 | MTR_3g012420 | 38.110 | 328 | 196 | 3 | 8 | 334 | 18 | 339 | 4.67e-70 | 224 |
| MsG0380016784.01.T01 | MTR_1g030580 | 33.242 | 364 | 227 | 5 | 3 | 358 | 12 | 367 | 8.46e-70 | 223 |
| MsG0380016784.01.T01 | MTR_1g068630 | 34.551 | 356 | 216 | 5 | 8 | 355 | 16 | 362 | 8.66e-70 | 223 |
| MsG0380016784.01.T01 | MTR_2g007990 | 34.118 | 340 | 212 | 4 | 6 | 341 | 14 | 345 | 5.28e-68 | 219 |
| MsG0380016784.01.T01 | MTR_2g027030 | 35.736 | 333 | 203 | 4 | 3 | 332 | 8 | 332 | 1.29e-67 | 217 |
| MsG0380016784.01.T01 | MTR_2g007960 | 36.858 | 331 | 202 | 5 | 6 | 332 | 11 | 338 | 5.92e-66 | 214 |
| MsG0380016784.01.T01 | MTR_7g100050 | 34.049 | 326 | 207 | 3 | 8 | 332 | 14 | 332 | 1.83e-64 | 209 |
| MsG0380016784.01.T01 | MTR_2g007260 | 33.429 | 350 | 217 | 4 | 6 | 347 | 13 | 354 | 2.35e-64 | 210 |
| MsG0380016784.01.T01 | MTR_2g102340 | 36.446 | 332 | 200 | 6 | 15 | 343 | 20 | 343 | 5.01e-64 | 208 |
| MsG0380016784.01.T01 | MTR_1g074070 | 35.569 | 343 | 211 | 4 | 8 | 349 | 17 | 350 | 8.57e-64 | 207 |
| MsG0380016784.01.T01 | MTR_3g072560 | 31.395 | 344 | 227 | 4 | 8 | 351 | 19 | 353 | 1.47e-62 | 205 |
| MsG0380016784.01.T01 | MTR_1g074160 | 34.870 | 347 | 216 | 4 | 3 | 348 | 9 | 346 | 2.49e-62 | 203 |
| MsG0380016784.01.T01 | MTR_4g094340 | 34.036 | 332 | 208 | 4 | 4 | 332 | 6 | 329 | 4.01e-62 | 203 |
| MsG0380016784.01.T01 | MTR_4g094340 | 34.036 | 332 | 208 | 4 | 4 | 332 | 24 | 347 | 5.03e-62 | 203 |
| MsG0380016784.01.T01 | MTR_4g094362 | 34.756 | 328 | 203 | 3 | 8 | 332 | 15 | 334 | 2.80e-61 | 201 |
| MsG0380016784.01.T01 | MTR_1g023180 | 33.136 | 338 | 209 | 5 | 9 | 332 | 23 | 357 | 3.05e-61 | 202 |
| MsG0380016784.01.T01 | MTR_4g094352 | 32.609 | 368 | 235 | 4 | 2 | 361 | 7 | 369 | 6.51e-61 | 201 |
| MsG0380016784.01.T01 | MTR_1g074120 | 35.866 | 329 | 201 | 6 | 5 | 332 | 14 | 333 | 7.96e-61 | 199 |
| MsG0380016784.01.T01 | MTR_1g051120 | 33.811 | 349 | 220 | 5 | 8 | 353 | 17 | 357 | 8.40e-61 | 199 |
| MsG0380016784.01.T01 | MTR_1g070175 | 32.011 | 353 | 222 | 5 | 8 | 356 | 17 | 355 | 9.10e-61 | 199 |
| MsG0380016784.01.T01 | MTR_1g074020 | 34.000 | 350 | 221 | 4 | 3 | 351 | 9 | 349 | 9.86e-61 | 199 |
| MsG0380016784.01.T01 | MTR_7g111830 | 34.557 | 327 | 210 | 3 | 8 | 332 | 8 | 332 | 2.71e-60 | 199 |
| MsG0380016784.01.T01 | MTR_3g112480 | 33.434 | 332 | 211 | 2 | 9 | 332 | 22 | 351 | 4.18e-60 | 199 |
| MsG0380016784.01.T01 | MTR_4g094342 | 31.595 | 326 | 221 | 1 | 2 | 327 | 8 | 331 | 2.53e-59 | 196 |
| MsG0380016784.01.T01 | MTR_8g006010 | 33.333 | 351 | 226 | 4 | 8 | 357 | 11 | 354 | 3.84e-59 | 196 |
| MsG0380016784.01.T01 | MTR_2g065550 | 32.923 | 325 | 212 | 1 | 8 | 332 | 11 | 329 | 7.13e-59 | 195 |
| MsG0380016784.01.T01 | MTR_8g006120 | 32.773 | 357 | 230 | 4 | 8 | 361 | 11 | 360 | 1.05e-58 | 194 |
| MsG0380016784.01.T01 | MTR_2g007970 | 33.537 | 328 | 211 | 5 | 6 | 332 | 11 | 332 | 2.04e-58 | 194 |
| MsG0380016784.01.T01 | MTR_3g072520 | 35.714 | 336 | 209 | 4 | 8 | 341 | 10 | 340 | 5.21e-58 | 193 |
| MsG0380016784.01.T01 | MTR_1g030600 | 34.462 | 325 | 207 | 3 | 9 | 332 | 20 | 339 | 5.90e-58 | 193 |
| MsG0380016784.01.T01 | MTR_8g006090 | 35.043 | 351 | 216 | 4 | 8 | 357 | 12 | 351 | 3.17e-57 | 190 |
| MsG0380016784.01.T01 | MTR_0096s0100 | 32.923 | 325 | 209 | 3 | 9 | 332 | 20 | 336 | 4.84e-57 | 190 |
| MsG0380016784.01.T01 | MTR_1g038560 | 31.884 | 345 | 223 | 4 | 8 | 351 | 4 | 337 | 1.76e-56 | 187 |
| MsG0380016784.01.T01 | MTR_6g081840 | 32.743 | 339 | 223 | 3 | 16 | 353 | 19 | 353 | 5.01e-56 | 187 |
| MsG0380016784.01.T01 | MTR_1g073990 | 34.682 | 346 | 216 | 5 | 5 | 348 | 14 | 351 | 7.27e-56 | 187 |
| MsG0380016784.01.T01 | MTR_5g089390 | 32.075 | 318 | 204 | 2 | 15 | 332 | 22 | 327 | 7.54e-56 | 186 |
| MsG0380016784.01.T01 | MTR_3g019050 | 31.385 | 325 | 213 | 3 | 10 | 332 | 21 | 337 | 1.14e-55 | 187 |
| MsG0380016784.01.T01 | MTR_4g129650 | 30.226 | 354 | 233 | 5 | 8 | 357 | 9 | 352 | 1.17e-55 | 186 |
| MsG0380016784.01.T01 | MTR_2g016710 | 30.623 | 369 | 235 | 4 | 2 | 358 | 3 | 362 | 2.65e-55 | 185 |
| MsG0380016784.01.T01 | MTR_4g094360 | 33.046 | 348 | 223 | 5 | 8 | 351 | 15 | 356 | 1.16e-54 | 184 |
| MsG0380016784.01.T01 | MTR_3g090550 | 32.955 | 352 | 222 | 7 | 8 | 358 | 7 | 345 | 2.03e-54 | 182 |
| MsG0380016784.01.T01 | MTR_5g069040 | 30.341 | 323 | 223 | 1 | 10 | 332 | 21 | 341 | 3.40e-54 | 183 |
| MsG0380016784.01.T01 | MTR_1g114210 | 31.594 | 345 | 226 | 3 | 8 | 352 | 12 | 346 | 3.62e-54 | 182 |
| MsG0380016784.01.T01 | MTR_5g068790 | 30.650 | 323 | 220 | 2 | 10 | 332 | 21 | 339 | 7.58e-54 | 182 |
| MsG0380016784.01.T01 | MTR_3g072500 | 34.866 | 261 | 161 | 5 | 98 | 357 | 6 | 258 | 2.02e-53 | 178 |
| MsG0380016784.01.T01 | MTR_1g030400 | 32.075 | 318 | 213 | 3 | 16 | 332 | 16 | 331 | 4.38e-51 | 174 |
| MsG0380016784.01.T01 | MTR_4g106720 | 31.515 | 330 | 216 | 5 | 5 | 332 | 9 | 330 | 1.58e-50 | 172 |
| MsG0380016784.01.T01 | MTR_4g094340 | 36.364 | 242 | 146 | 3 | 94 | 332 | 27 | 263 | 3.25e-50 | 170 |
| MsG0380016784.01.T01 | MTR_0103s0090 | 30.655 | 336 | 223 | 5 | 5 | 339 | 9 | 335 | 3.77e-49 | 169 |
| MsG0380016784.01.T01 | MTR_5g034990 | 30.286 | 350 | 220 | 8 | 4 | 342 | 11 | 347 | 2.68e-48 | 167 |
| MsG0380016784.01.T01 | MTR_3g112480 | 33.452 | 281 | 177 | 2 | 60 | 332 | 18 | 296 | 3.11e-48 | 166 |
| MsG0380016784.01.T01 | MTR_8g006090 | 35.644 | 303 | 189 | 2 | 8 | 310 | 12 | 308 | 3.51e-48 | 165 |
| MsG0380016784.01.T01 | MTR_4g094360 | 32.566 | 304 | 199 | 3 | 8 | 310 | 15 | 313 | 2.84e-46 | 160 |
| MsG0380016784.01.T01 | MTR_3g072500 | 31.518 | 257 | 171 | 3 | 3 | 259 | 16 | 267 | 1.84e-45 | 157 |
| MsG0380016784.01.T01 | MTR_5g021160 | 30.347 | 346 | 231 | 6 | 9 | 351 | 9 | 347 | 2.53e-45 | 159 |
| MsG0380016784.01.T01 | MTR_6g007743 | 30.000 | 330 | 221 | 4 | 8 | 337 | 13 | 332 | 3.22e-45 | 159 |
| MsG0380016784.01.T01 | MTR_2g016710 | 30.094 | 319 | 214 | 3 | 2 | 320 | 3 | 312 | 1.41e-44 | 156 |
| MsG0380016784.01.T01 | MTR_8g006090 | 35.943 | 281 | 169 | 3 | 78 | 357 | 1 | 271 | 4.96e-44 | 153 |
| MsG0380016784.01.T01 | MTR_8g006050 | 28.652 | 356 | 214 | 6 | 8 | 361 | 12 | 329 | 6.59e-43 | 152 |
| MsG0380016784.01.T01 | MTR_4g094360 | 32.997 | 297 | 188 | 6 | 59 | 351 | 20 | 309 | 4.57e-42 | 150 |
| MsG0380016784.01.T01 | MTR_2g102340 | 37.302 | 252 | 148 | 6 | 9 | 259 | 41 | 283 | 2.16e-41 | 148 |
| MsG0380016784.01.T01 | MTR_6g007747 | 28.809 | 361 | 235 | 6 | 8 | 358 | 13 | 361 | 4.59e-41 | 148 |
| MsG0380016784.01.T01 | MTR_5g034910 | 28.916 | 332 | 226 | 5 | 12 | 341 | 12 | 335 | 5.07e-41 | 147 |
| MsG0380016784.01.T01 | MTR_1g074160 | 34.572 | 269 | 160 | 5 | 3 | 270 | 9 | 262 | 9.67e-41 | 144 |
| MsG0380016784.01.T01 | MTR_6g007757 | 29.912 | 341 | 230 | 3 | 8 | 348 | 13 | 344 | 2.26e-40 | 146 |
| MsG0380016784.01.T01 | MTR_6g007750 | 27.410 | 332 | 230 | 4 | 8 | 337 | 13 | 335 | 3.61e-40 | 145 |
| MsG0380016784.01.T01 | MTR_5g034930 | 28.571 | 343 | 232 | 6 | 3 | 341 | 2 | 335 | 7.76e-40 | 144 |
| MsG0380016784.01.T01 | MTR_0103s0090 | 31.276 | 243 | 161 | 2 | 97 | 339 | 8 | 244 | 8.26e-40 | 142 |
| MsG0380016784.01.T01 | MTR_5g034980 | 29.375 | 320 | 213 | 6 | 16 | 332 | 16 | 325 | 9.76e-40 | 144 |
| MsG0380016784.01.T01 | MTR_4g094340 | 32.432 | 259 | 164 | 4 | 4 | 259 | 6 | 256 | 1.24e-38 | 139 |
| MsG0380016784.01.T01 | MTR_4g094340 | 32.432 | 259 | 164 | 4 | 4 | 259 | 24 | 274 | 1.74e-38 | 139 |
| MsG0380016784.01.T01 | MTR_4g129650 | 30.279 | 251 | 166 | 3 | 108 | 357 | 3 | 245 | 3.65e-38 | 137 |
| MsG0380016784.01.T01 | MTR_3g072530 | 29.630 | 297 | 158 | 6 | 3 | 259 | 10 | 295 | 3.86e-38 | 139 |
| MsG0380016784.01.T01 | MTR_1g014510 | 27.301 | 326 | 231 | 4 | 8 | 332 | 12 | 332 | 4.75e-38 | 142 |
| MsG0380016784.01.T01 | MTR_6g007740 | 28.182 | 330 | 227 | 4 | 8 | 337 | 13 | 332 | 5.20e-38 | 142 |
| MsG0380016784.01.T01 | MTR_6g007760 | 27.184 | 309 | 216 | 4 | 5 | 312 | 9 | 309 | 5.63e-38 | 139 |
| MsG0380016784.01.T01 | MTR_3g112480 | 32.287 | 223 | 143 | 1 | 118 | 332 | 2 | 224 | 5.41e-37 | 134 |
| MsG0380016784.01.T01 | MTR_5g025370 | 28.134 | 359 | 232 | 8 | 1 | 339 | 4 | 356 | 6.22e-37 | 137 |
| MsG0380016784.01.T01 | MTR_5g025290 | 26.087 | 368 | 236 | 6 | 9 | 356 | 13 | 364 | 1.73e-36 | 136 |
| MsG0380016784.01.T01 | MTR_5g025290 | 26.087 | 368 | 236 | 6 | 9 | 356 | 41 | 392 | 2.35e-36 | 136 |
| MsG0380016784.01.T01 | MTR_5g025400 | 26.722 | 363 | 244 | 7 | 9 | 357 | 13 | 367 | 1.79e-35 | 134 |
| MsG0380016784.01.T01 | MTR_5g025340 | 27.273 | 352 | 226 | 6 | 9 | 339 | 12 | 354 | 2.06e-35 | 133 |
| MsG0380016784.01.T01 | MTR_5g021160 | 30.916 | 262 | 173 | 4 | 93 | 351 | 8 | 264 | 4.83e-35 | 130 |
| MsG0380016784.01.T01 | MTR_5g025330 | 27.557 | 352 | 225 | 7 | 9 | 339 | 11 | 353 | 8.16e-35 | 134 |
| MsG0380016784.01.T01 | MTR_8g006090 | 34.855 | 241 | 151 | 2 | 8 | 248 | 12 | 246 | 6.55e-34 | 127 |
| MsG0380016784.01.T01 | MTR_6g007753 | 28.912 | 294 | 197 | 5 | 46 | 337 | 333 | 616 | 1.06e-33 | 132 |
| MsG0380016784.01.T01 | MTR_6g007753 | 26.339 | 224 | 157 | 2 | 114 | 337 | 77 | 292 | 1.80e-22 | 99.4 |
| MsG0380016784.01.T01 | MTR_5g034970 | 29.518 | 332 | 208 | 7 | 11 | 339 | 11 | 319 | 1.59e-33 | 127 |
| MsG0380016784.01.T01 | MTR_1g052205 | 32.000 | 250 | 146 | 5 | 120 | 358 | 11 | 247 | 4.41e-33 | 124 |
| MsG0380016784.01.T01 | MTR_8g072350 | 25.895 | 363 | 242 | 5 | 11 | 356 | 13 | 365 | 2.78e-32 | 125 |
| MsG0380016784.01.T01 | MTR_3g072500 | 29.808 | 208 | 141 | 3 | 3 | 210 | 16 | 218 | 5.65e-32 | 120 |
| MsG0380016784.01.T01 | MTR_1g051120 | 33.173 | 208 | 130 | 3 | 5 | 211 | 14 | 213 | 2.10e-31 | 118 |
| MsG0380016784.01.T01 | MTR_1g051120 | 33.816 | 207 | 128 | 3 | 5 | 210 | 14 | 212 | 5.05e-31 | 119 |
| MsG0380016784.01.T01 | MTR_5g021160 | 33.058 | 242 | 153 | 5 | 9 | 248 | 9 | 243 | 3.55e-30 | 117 |
| MsG0380016784.01.T01 | MTR_6g007757 | 30.315 | 254 | 168 | 3 | 5 | 258 | 10 | 254 | 5.89e-30 | 116 |
| MsG0380016784.01.T01 | MTR_4g100840 | 28.182 | 330 | 219 | 8 | 11 | 332 | 18 | 337 | 6.11e-30 | 118 |
| MsG0380016784.01.T01 | MTR_4g094342 | 28.879 | 232 | 154 | 2 | 2 | 224 | 8 | 237 | 3.60e-26 | 105 |
| MsG0380016784.01.T01 | MTR_3g093450 | 36.585 | 164 | 63 | 4 | 129 | 283 | 20 | 151 | 1.48e-25 | 102 |
| MsG0380016784.01.T01 | MTR_5g012650 | 26.816 | 358 | 235 | 8 | 11 | 363 | 12 | 347 | 5.38e-24 | 101 |
| MsG0380016784.01.T01 | MTR_4g094340 | 31.401 | 207 | 131 | 4 | 4 | 207 | 24 | 222 | 3.97e-23 | 96.7 |
| MsG0380016784.01.T01 | MTR_5g034980 | 28.340 | 247 | 164 | 6 | 16 | 259 | 16 | 252 | 2.46e-22 | 96.3 |
| MsG0380016784.01.T01 | MTR_8g006090 | 36.257 | 171 | 104 | 1 | 78 | 248 | 1 | 166 | 6.02e-21 | 90.5 |
| MsG0380016784.01.T01 | MTR_1g068720 | 32.653 | 147 | 92 | 4 | 208 | 351 | 96 | 238 | 2.47e-19 | 86.7 |
| MsG0380016784.01.T01 | MTR_8g076800 | 35.922 | 103 | 65 | 1 | 181 | 283 | 143 | 244 | 1.08e-14 | 73.9 |
| MsG0380016784.01.T01 | MTR_6g007470 | 30.645 | 124 | 65 | 2 | 160 | 283 | 82 | 184 | 4.71e-13 | 68.2 |
| MsG0380016784.01.T01 | MTR_4g094348 | 28.788 | 132 | 90 | 2 | 88 | 215 | 1 | 132 | 5.89e-13 | 67.0 |
| MsG0380016784.01.T01 | MTR_1g014790 | 31.897 | 116 | 76 | 1 | 94 | 209 | 48 | 160 | 5.44e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016784.01.T01 | AT5G64700 | 48.747 | 359 | 175 | 4 | 1 | 354 | 1 | 355 | 4.76e-107 | 318 |
| MsG0380016784.01.T01 | AT5G64700 | 50.379 | 264 | 123 | 3 | 1 | 260 | 1 | 260 | 7.32e-80 | 245 |
| MsG0380016784.01.T01 | AT1G43650 | 37.640 | 356 | 205 | 3 | 3 | 358 | 2 | 340 | 2.58e-72 | 229 |
| MsG0380016784.01.T01 | AT4G08290 | 33.705 | 359 | 227 | 3 | 2 | 354 | 7 | 360 | 8.69e-72 | 229 |
| MsG0380016784.01.T01 | AT1G44800 | 32.172 | 373 | 226 | 6 | 2 | 362 | 5 | 362 | 1.51e-69 | 223 |
| MsG0380016784.01.T01 | AT1G21890 | 33.333 | 357 | 227 | 3 | 3 | 350 | 6 | 360 | 7.01e-69 | 221 |
| MsG0380016784.01.T01 | AT5G07050 | 35.028 | 354 | 220 | 5 | 8 | 358 | 18 | 364 | 1.63e-67 | 218 |
| MsG0380016784.01.T01 | AT4G08300 | 30.939 | 362 | 240 | 3 | 3 | 358 | 6 | 363 | 6.35e-66 | 213 |
| MsG0380016784.01.T01 | AT2G39510 | 34.627 | 335 | 207 | 4 | 1 | 332 | 1 | 326 | 4.62e-64 | 208 |
| MsG0380016784.01.T01 | AT2G40900 | 31.903 | 373 | 229 | 5 | 1 | 360 | 3 | 363 | 2.31e-62 | 204 |
| MsG0380016784.01.T01 | AT1G75500 | 34.940 | 332 | 200 | 4 | 9 | 332 | 21 | 344 | 7.80e-62 | 203 |
| MsG0380016784.01.T01 | AT1G75500 | 34.940 | 332 | 200 | 4 | 9 | 332 | 21 | 344 | 7.80e-62 | 203 |
| MsG0380016784.01.T01 | AT4G30420 | 31.200 | 375 | 230 | 6 | 3 | 364 | 4 | 363 | 8.90e-62 | 203 |
| MsG0380016784.01.T01 | AT4G30420 | 31.250 | 368 | 225 | 6 | 10 | 364 | 1 | 353 | 2.50e-60 | 199 |
| MsG0380016784.01.T01 | AT1G21890 | 33.968 | 315 | 202 | 2 | 3 | 313 | 6 | 318 | 1.60e-59 | 196 |
| MsG0380016784.01.T01 | AT2G37460 | 31.361 | 338 | 220 | 4 | 3 | 339 | 10 | 336 | 1.29e-58 | 194 |
| MsG0380016784.01.T01 | AT5G13670 | 31.667 | 360 | 238 | 5 | 1 | 357 | 1 | 355 | 4.84e-57 | 190 |
| MsG0380016784.01.T01 | AT3G53210 | 33.642 | 324 | 209 | 2 | 9 | 332 | 11 | 328 | 5.30e-56 | 187 |
| MsG0380016784.01.T01 | AT1G09380 | 30.303 | 330 | 227 | 2 | 1 | 330 | 1 | 327 | 9.49e-56 | 187 |
| MsG0380016784.01.T01 | AT1G68170 | 30.857 | 350 | 232 | 7 | 5 | 351 | 10 | 352 | 1.15e-55 | 186 |
| MsG0380016784.01.T01 | AT1G68170 | 31.105 | 344 | 227 | 7 | 11 | 351 | 6 | 342 | 1.61e-55 | 186 |
| MsG0380016784.01.T01 | AT1G11450 | 32.194 | 351 | 226 | 5 | 3 | 352 | 11 | 350 | 9.47e-55 | 184 |
| MsG0380016784.01.T01 | AT3G56620 | 32.326 | 331 | 212 | 4 | 1 | 330 | 3 | 322 | 1.27e-54 | 184 |
| MsG0380016784.01.T01 | AT4G28040 | 28.169 | 355 | 236 | 5 | 1 | 353 | 1 | 338 | 6.07e-53 | 179 |
| MsG0380016784.01.T01 | AT4G28040 | 28.169 | 355 | 236 | 5 | 1 | 353 | 1 | 338 | 6.07e-53 | 179 |
| MsG0380016784.01.T01 | AT4G28040 | 28.169 | 355 | 236 | 5 | 1 | 353 | 1 | 338 | 6.07e-53 | 179 |
| MsG0380016784.01.T01 | AT4G28040 | 28.169 | 355 | 236 | 5 | 1 | 353 | 1 | 338 | 6.07e-53 | 179 |
| MsG0380016784.01.T01 | AT4G28040 | 28.169 | 355 | 236 | 5 | 1 | 353 | 1 | 338 | 6.07e-53 | 179 |
| MsG0380016784.01.T01 | AT1G11450 | 34.295 | 312 | 193 | 5 | 42 | 352 | 6 | 306 | 1.19e-52 | 177 |
| MsG0380016784.01.T01 | AT1G01070 | 31.180 | 356 | 234 | 5 | 8 | 361 | 16 | 362 | 4.80e-52 | 177 |
| MsG0380016784.01.T01 | AT1G11450 | 34.091 | 308 | 191 | 5 | 46 | 352 | 3 | 299 | 4.80e-51 | 172 |
| MsG0380016784.01.T01 | AT5G40230 | 30.595 | 353 | 228 | 6 | 8 | 350 | 21 | 366 | 1.11e-50 | 174 |
| MsG0380016784.01.T01 | AT4G01430 | 30.194 | 361 | 234 | 7 | 1 | 352 | 2 | 353 | 3.84e-50 | 172 |
| MsG0380016784.01.T01 | AT3G30340 | 31.176 | 340 | 220 | 7 | 11 | 343 | 11 | 343 | 1.42e-49 | 171 |
| MsG0380016784.01.T01 | AT1G11460 | 31.118 | 331 | 218 | 5 | 4 | 332 | 12 | 334 | 3.94e-49 | 169 |
| MsG0380016784.01.T01 | AT3G18200 | 31.098 | 328 | 207 | 4 | 10 | 332 | 37 | 350 | 8.54e-49 | 169 |
| MsG0380016784.01.T01 | AT1G25270 | 30.836 | 347 | 226 | 7 | 10 | 350 | 5 | 343 | 1.84e-48 | 167 |
| MsG0380016784.01.T01 | AT5G40240 | 31.307 | 329 | 214 | 5 | 8 | 332 | 20 | 340 | 1.18e-47 | 166 |
| MsG0380016784.01.T01 | AT5G40240 | 31.307 | 329 | 214 | 5 | 8 | 332 | 20 | 340 | 1.18e-47 | 166 |
| MsG0380016784.01.T01 | AT5G40240 | 31.307 | 329 | 214 | 5 | 8 | 332 | 34 | 354 | 1.54e-47 | 166 |
| MsG0380016784.01.T01 | AT4G08290 | 33.591 | 259 | 167 | 2 | 2 | 260 | 7 | 260 | 4.73e-47 | 161 |
| MsG0380016784.01.T01 | AT2G37450 | 28.212 | 358 | 222 | 6 | 3 | 355 | 4 | 331 | 3.66e-46 | 160 |
| MsG0380016784.01.T01 | AT1G11450 | 31.715 | 309 | 202 | 4 | 3 | 310 | 11 | 311 | 9.50e-46 | 159 |
| MsG0380016784.01.T01 | AT1G11450 | 34.483 | 261 | 161 | 3 | 93 | 352 | 7 | 258 | 2.03e-45 | 156 |
| MsG0380016784.01.T01 | AT1G01070 | 32.143 | 308 | 198 | 5 | 56 | 361 | 17 | 315 | 2.40e-45 | 158 |
| MsG0380016784.01.T01 | AT1G43650 | 35.659 | 258 | 156 | 2 | 3 | 260 | 2 | 249 | 5.91e-45 | 155 |
| MsG0380016784.01.T01 | AT3G53210 | 33.708 | 267 | 173 | 1 | 66 | 332 | 9 | 271 | 1.00e-43 | 154 |
| MsG0380016784.01.T01 | AT4G15540 | 29.143 | 350 | 223 | 6 | 8 | 351 | 17 | 347 | 1.24e-42 | 152 |
| MsG0380016784.01.T01 | AT4G15540 | 29.143 | 350 | 223 | 6 | 8 | 351 | 17 | 347 | 1.24e-42 | 152 |
| MsG0380016784.01.T01 | AT4G01440 | 28.286 | 350 | 229 | 5 | 7 | 353 | 6 | 336 | 2.46e-42 | 151 |
| MsG0380016784.01.T01 | AT4G01430 | 30.063 | 316 | 206 | 6 | 1 | 310 | 2 | 308 | 1.03e-41 | 149 |
| MsG0380016784.01.T01 | AT3G53210 | 34.263 | 251 | 159 | 2 | 9 | 259 | 11 | 255 | 1.78e-41 | 146 |
| MsG0380016784.01.T01 | AT3G28050 | 27.809 | 356 | 237 | 7 | 5 | 358 | 9 | 346 | 4.04e-39 | 143 |
| MsG0380016784.01.T01 | AT3G28130 | 28.324 | 346 | 239 | 6 | 11 | 353 | 16 | 355 | 1.41e-38 | 141 |
| MsG0380016784.01.T01 | AT4G01440 | 28.664 | 307 | 209 | 4 | 7 | 310 | 6 | 305 | 1.60e-37 | 137 |
| MsG0380016784.01.T01 | AT5G40210 | 27.160 | 324 | 209 | 7 | 11 | 332 | 16 | 314 | 3.62e-36 | 134 |
| MsG0380016784.01.T01 | AT5G45370 | 30.124 | 322 | 208 | 3 | 11 | 332 | 23 | 327 | 4.18e-36 | 134 |
| MsG0380016784.01.T01 | AT5G45370 | 29.429 | 333 | 220 | 4 | 11 | 332 | 23 | 351 | 3.55e-35 | 132 |
| MsG0380016784.01.T01 | AT5G45370 | 29.429 | 333 | 220 | 4 | 11 | 332 | 23 | 351 | 3.55e-35 | 132 |
| MsG0380016784.01.T01 | AT3G28070 | 29.268 | 246 | 167 | 4 | 93 | 336 | 8 | 248 | 6.21e-35 | 129 |
| MsG0380016784.01.T01 | AT2G37450 | 29.545 | 264 | 174 | 4 | 97 | 355 | 3 | 259 | 6.39e-35 | 129 |
| MsG0380016784.01.T01 | AT1G70260 | 24.438 | 356 | 264 | 2 | 4 | 354 | 8 | 363 | 7.94e-35 | 132 |
| MsG0380016784.01.T01 | AT3G28100 | 26.606 | 327 | 233 | 5 | 11 | 336 | 17 | 337 | 1.96e-34 | 130 |
| MsG0380016784.01.T01 | AT3G28070 | 29.268 | 246 | 167 | 4 | 93 | 336 | 100 | 340 | 4.32e-34 | 129 |
| MsG0380016784.01.T01 | AT3G28130 | 29.167 | 264 | 180 | 4 | 93 | 353 | 10 | 269 | 1.04e-33 | 126 |
| MsG0380016784.01.T01 | AT3G28130 | 29.167 | 264 | 180 | 4 | 93 | 353 | 10 | 269 | 1.04e-33 | 126 |
| MsG0380016784.01.T01 | AT4G19185 | 27.451 | 357 | 238 | 5 | 9 | 351 | 22 | 371 | 1.82e-33 | 128 |
| MsG0380016784.01.T01 | AT3G45870 | 27.747 | 364 | 247 | 6 | 9 | 363 | 13 | 369 | 2.31e-32 | 125 |
| MsG0380016784.01.T01 | AT3G30340 | 30.566 | 265 | 170 | 7 | 11 | 271 | 11 | 265 | 5.13e-32 | 122 |
| MsG0380016784.01.T01 | AT3G28080 | 28.512 | 242 | 168 | 3 | 92 | 332 | 7 | 244 | 5.81e-32 | 121 |
| MsG0380016784.01.T01 | AT3G28080 | 28.512 | 242 | 168 | 3 | 92 | 332 | 7 | 244 | 5.81e-32 | 121 |
| MsG0380016784.01.T01 | AT3G28080 | 28.512 | 242 | 168 | 3 | 92 | 332 | 7 | 244 | 5.81e-32 | 121 |
| MsG0380016784.01.T01 | AT3G28080 | 28.512 | 242 | 168 | 3 | 92 | 332 | 7 | 244 | 5.81e-32 | 121 |
| MsG0380016784.01.T01 | AT5G47470 | 27.697 | 343 | 223 | 8 | 15 | 352 | 37 | 359 | 8.98e-32 | 123 |
| MsG0380016784.01.T01 | AT3G28080 | 27.636 | 275 | 192 | 5 | 59 | 332 | 65 | 333 | 1.31e-31 | 122 |
| MsG0380016784.01.T01 | AT5G47470 | 27.405 | 343 | 224 | 7 | 15 | 352 | 65 | 387 | 1.56e-31 | 123 |
| MsG0380016784.01.T01 | AT5G47470 | 27.844 | 334 | 221 | 6 | 11 | 339 | 61 | 379 | 3.57e-31 | 122 |
| MsG0380016784.01.T01 | AT3G18200 | 30.870 | 230 | 142 | 3 | 108 | 332 | 3 | 220 | 5.07e-31 | 118 |
| MsG0380016784.01.T01 | AT3G28080 | 28.185 | 259 | 180 | 4 | 75 | 332 | 72 | 325 | 5.73e-31 | 120 |
| MsG0380016784.01.T01 | AT4G01440 | 27.984 | 243 | 158 | 2 | 111 | 353 | 3 | 228 | 9.24e-31 | 118 |
| MsG0380016784.01.T01 | AT4G01440 | 27.984 | 243 | 158 | 2 | 111 | 353 | 3 | 228 | 9.24e-31 | 118 |
| MsG0380016784.01.T01 | AT4G01430 | 30.357 | 224 | 141 | 5 | 138 | 353 | 1 | 217 | 8.45e-29 | 112 |
| MsG0380016784.01.T01 | AT1G60050 | 23.014 | 365 | 254 | 6 | 8 | 360 | 13 | 362 | 1.73e-28 | 114 |
| MsG0380016784.01.T01 | AT4G01440 | 28.516 | 256 | 173 | 4 | 7 | 259 | 6 | 254 | 4.57e-28 | 111 |
| MsG0380016784.01.T01 | AT2G37450 | 23.743 | 358 | 199 | 7 | 3 | 355 | 4 | 292 | 1.91e-27 | 110 |
| MsG0380016784.01.T01 | AT4G19185 | 27.206 | 272 | 181 | 3 | 93 | 351 | 26 | 293 | 3.39e-27 | 110 |
| MsG0380016784.01.T01 | AT4G01450 | 27.523 | 327 | 222 | 3 | 8 | 332 | 10 | 323 | 1.56e-26 | 108 |
| MsG0380016784.01.T01 | AT3G28070 | 28.636 | 220 | 150 | 4 | 93 | 310 | 100 | 314 | 3.38e-26 | 107 |
| MsG0380016784.01.T01 | AT5G45370 | 29.084 | 251 | 165 | 3 | 93 | 332 | 1 | 249 | 9.02e-26 | 105 |
| MsG0380016784.01.T01 | AT5G45370 | 29.084 | 251 | 165 | 3 | 93 | 332 | 1 | 249 | 9.02e-26 | 105 |
| MsG0380016784.01.T01 | AT4G16620 | 27.123 | 365 | 250 | 5 | 2 | 363 | 6 | 357 | 2.42e-25 | 105 |
| MsG0380016784.01.T01 | AT3G45870 | 27.010 | 311 | 212 | 5 | 9 | 310 | 13 | 317 | 5.05e-25 | 103 |
| MsG0380016784.01.T01 | AT3G28070 | 26.389 | 216 | 152 | 4 | 123 | 336 | 1 | 211 | 1.43e-24 | 100 |
| MsG0380016784.01.T01 | AT4G01450 | 25.902 | 305 | 211 | 3 | 8 | 310 | 10 | 301 | 2.71e-24 | 102 |
| MsG0380016784.01.T01 | AT3G28130 | 26.923 | 234 | 164 | 4 | 123 | 353 | 1 | 230 | 6.30e-24 | 99.0 |
| MsG0380016784.01.T01 | AT4G01450 | 26.337 | 243 | 164 | 3 | 8 | 248 | 10 | 239 | 5.41e-22 | 94.4 |
| MsG0380016784.01.T01 | AT3G28080 | 25.118 | 211 | 153 | 3 | 123 | 332 | 1 | 207 | 9.69e-21 | 90.1 |
| MsG0380016784.01.T01 | AT3G28080 | 25.182 | 274 | 146 | 6 | 59 | 332 | 65 | 279 | 3.14e-20 | 90.1 |
| MsG0380016784.01.T01 | AT3G28080 | 25.311 | 241 | 123 | 4 | 92 | 332 | 7 | 190 | 1.01e-19 | 87.0 |
| MsG0380016784.01.T01 | AT4G01450 | 27.143 | 210 | 138 | 3 | 8 | 215 | 10 | 206 | 3.72e-19 | 86.3 |
| MsG0380016784.01.T01 | AT3G45870 | 26.459 | 257 | 173 | 6 | 117 | 363 | 44 | 294 | 1.45e-18 | 85.5 |
| MsG0380016784.01.T01 | AT3G45870 | 28.311 | 219 | 143 | 4 | 9 | 218 | 13 | 226 | 1.77e-18 | 84.7 |
| MsG0380016784.01.T01 | AT3G28100 | 25.301 | 249 | 180 | 4 | 11 | 258 | 17 | 260 | 2.18e-18 | 84.3 |
| MsG0380016784.01.T01 | AT5G45370 | 26.818 | 220 | 148 | 3 | 124 | 332 | 74 | 291 | 1.04e-17 | 83.2 |
| MsG0380016784.01.T01 | AT4G24980 | 23.028 | 317 | 165 | 9 | 22 | 335 | 1 | 241 | 1.62e-17 | 82.0 |
| MsG0380016784.01.T01 | AT3G28130 | 26.104 | 249 | 178 | 4 | 11 | 258 | 16 | 259 | 1.74e-17 | 81.6 |
| MsG0380016784.01.T01 | AT4G16620 | 27.407 | 270 | 181 | 4 | 97 | 363 | 3 | 260 | 2.25e-17 | 81.3 |
| MsG0380016784.01.T01 | AT4G16620 | 27.407 | 270 | 181 | 4 | 97 | 363 | 3 | 260 | 2.25e-17 | 81.3 |
| MsG0380016784.01.T01 | AT3G28100 | 27.000 | 200 | 141 | 3 | 11 | 210 | 17 | 211 | 9.93e-15 | 73.6 |
| MsG0380016784.01.T01 | AT4G16620 | 26.749 | 243 | 170 | 2 | 2 | 244 | 6 | 240 | 2.65e-14 | 72.8 |
| MsG0380016784.01.T01 | AT3G28130 | 26.500 | 200 | 142 | 3 | 11 | 210 | 16 | 210 | 6.67e-14 | 70.5 |
| MsG0380016784.01.T01 | AT3G45870 | 27.184 | 206 | 136 | 5 | 168 | 363 | 17 | 218 | 3.78e-12 | 65.9 |
| MsG0380016784.01.T01 | AT3G45870 | 24.257 | 202 | 142 | 3 | 117 | 310 | 44 | 242 | 7.66e-12 | 65.1 |
| MsG0380016784.01.T01 | AT3G45870 | 24.257 | 202 | 142 | 3 | 117 | 310 | 44 | 242 | 7.66e-12 | 65.1 |
Find 73 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTTTGTGGATTGTATTTC+AGG | 0.221101 | 3:+87895943 | MsG0380016784.01.T01:CDS |
| TTGGGTGAGCCACTACGTTT+AGG | 0.271128 | 3:+87896634 | MsG0380016784.01.T01:CDS |
| TATGGCTGGCGTAGCGATTC+TGG | 0.290974 | 3:+87895772 | MsG0380016784.01.T01:CDS |
| AAAGTTACCCTTCAAGATTA+AGG | 0.291995 | 3:+87896155 | MsG0380016784.01.T01:CDS |
| AGCATCCTCAAAATTGAAAA+TGG | 0.316668 | 3:-87897047 | None:intergenic |
| TTTGATAATGAAAATGTATA+TGG | 0.322037 | 3:-87894948 | None:intergenic |
| AATTGGTTCTGTCTTCCTCT+TGG | 0.327774 | 3:+87896615 | MsG0380016784.01.T01:CDS |
| GTCTTAAATGAGAATTTAAC+TGG | 0.330812 | 3:-87895271 | None:intergenic |
| GATGTCGCGCAATCCGTAAC+TGG | 0.348644 | 3:-87895811 | None:intergenic |
| GTTTATAAAATTGCGCTCAT+TGG | 0.350399 | 3:+87897016 | MsG0380016784.01.T01:three_prime_UTR |
| ATTGGTTCTGTCTTCCTCTT+GGG | 0.353012 | 3:+87896616 | MsG0380016784.01.T01:CDS |
| ATTGTTAACACTGCCAAATA+TGG | 0.356055 | 3:-87894993 | None:intergenic |
| TCTTTATTATATGCTTGAAT+AGG | 0.360054 | 3:-87896870 | None:intergenic |
| TCTCAATCACCAATGCTTGC+AGG | 0.364052 | 3:-87896537 | None:intergenic |
| GTAAATATAAGGACAATATC+TGG | 0.372307 | 3:+87895719 | MsG0380016784.01.T01:CDS |
| TGGGTGAGCCACTACGTTTA+GGG | 0.372770 | 3:+87896635 | MsG0380016784.01.T01:CDS |
| AGCCATGATTATGGTCCCTT+TGG | 0.378322 | 3:+87895112 | MsG0380016784.01.T01:CDS |
| ACTGATTGGAGCCATGATTA+TGG | 0.379191 | 3:+87895103 | MsG0380016784.01.T01:CDS |
| GAGTGAACTAGGTCCATATT+TGG | 0.381361 | 3:+87894980 | MsG0380016784.01.T01:CDS |
| CACCAATGCTTGCAGGTAAT+AGG | 0.385404 | 3:-87896530 | None:intergenic |
| CCACAGTCATGTGGAGTTTG+TGG | 0.387167 | 3:+87895930 | MsG0380016784.01.T01:CDS |
| CTCATGAACCTTAATCTTGA+AGG | 0.395584 | 3:-87896163 | None:intergenic |
| GATTGGAAAAGGTAAATATA+AGG | 0.404024 | 3:+87895708 | MsG0380016784.01.T01:intron |
| ATTGCGCGACATCTCCTATC+TGG | 0.406337 | 3:+87895821 | MsG0380016784.01.T01:CDS |
| TCTTCTTTGCTGTTCTGCTC+AGG | 0.417807 | 3:+87895537 | MsG0380016784.01.T01:CDS |
| ACATCTGATCGATTACTTGA+AGG | 0.419312 | 3:-87897112 | None:intergenic |
| TGTTTACACTTCTGCTACGT+TGG | 0.421543 | 3:+87895478 | MsG0380016784.01.T01:CDS |
| GTCTTCTACAGACAACTGAT+TGG | 0.428774 | 3:+87895089 | MsG0380016784.01.T01:CDS |
| TTCTCTGTGTAGATTGGAAA+AGG | 0.435374 | 3:+87895697 | MsG0380016784.01.T01:intron |
| TTCCAAGTTGCTGAGAAAAC+TGG | 0.445598 | 3:-87896568 | None:intergenic |
| TCCTTCGTTAAACACGGCCT+TGG | 0.448926 | 3:-87895048 | None:intergenic |
| TTGAGCAGTGGAAGTTAGGT+TGG | 0.454085 | 3:+87896248 | MsG0380016784.01.T01:CDS |
| TAATAAAGAATGTGAAGATC+AGG | 0.465028 | 3:+87896884 | MsG0380016784.01.T01:CDS |
| ACAATGCAATTAATATATGC+GGG | 0.477187 | 3:+87895011 | MsG0380016784.01.T01:CDS |
| TTATGGGCTAAAAGCAAAGA+AGG | 0.485423 | 3:+87896825 | MsG0380016784.01.T01:CDS |
| TTTACAAAGGACCCCAGTTA+CGG | 0.487952 | 3:+87895798 | MsG0380016784.01.T01:CDS |
| CTATGCTCATTGGAGTGGTT+TGG | 0.488546 | 3:-87896928 | None:intergenic |
| TGTGATGATATGATCCAGAT+AGG | 0.496562 | 3:-87895835 | None:intergenic |
| TTCCTATTACCTGCAAGCAT+TGG | 0.505951 | 3:+87896528 | MsG0380016784.01.T01:CDS |
| AGTGAGTGTATTATTGTGTA+TGG | 0.513613 | 3:+87895754 | MsG0380016784.01.T01:CDS |
| ACTTTAGCTTTGAATGTGCA+TGG | 0.527471 | 3:+87895446 | MsG0380016784.01.T01:CDS |
| AACAATGCAATTAATATATG+CGG | 0.528860 | 3:+87895010 | MsG0380016784.01.T01:CDS |
| AGCCAAAGGGACCATAATCA+TGG | 0.530728 | 3:-87895114 | None:intergenic |
| ATGTCGCGCAATCCGTAACT+GGG | 0.531286 | 3:-87895810 | None:intergenic |
| GACACATAGTTATTAGAAAG+AGG | 0.532751 | 3:-87896989 | None:intergenic |
| AAATGAGAATTTAACTGGCA+CGG | 0.543903 | 3:-87895266 | None:intergenic |
| CTTTGGCTTTGATATTTGAA+CGG | 0.548145 | 3:+87895129 | MsG0380016784.01.T01:CDS |
| TGTTCCTAGCCACAGTCATG+TGG | 0.559751 | 3:+87895921 | MsG0380016784.01.T01:CDS |
| AATATGACTATGAGTGAACT+AGG | 0.561188 | 3:+87894969 | MsG0380016784.01.T01:exon |
| GCAAAGAAGAATGTACAAGC+AGG | 0.570488 | 3:-87895524 | None:intergenic |
| TCATGAACCTTAATCTTGAA+GGG | 0.574256 | 3:-87896162 | None:intergenic |
| CGTTCAAATATCAAAGCCAA+AGG | 0.580981 | 3:-87895128 | None:intergenic |
| GTTCAAATATCAAAGCCAAA+GGG | 0.583897 | 3:-87895127 | None:intergenic |
| GAGGAAGACAGAACCAATTG+TGG | 0.595553 | 3:-87896611 | None:intergenic |
| AGTGTATTATTGTGTATGGC+TGG | 0.596234 | 3:+87895758 | MsG0380016784.01.T01:CDS |
| ACGTAGCAGAAGTGTAAACA+AGG | 0.599800 | 3:-87895475 | None:intergenic |
| TTTCATTCCTTCGTTAAACA+CGG | 0.604193 | 3:-87895054 | None:intergenic |
| GGGGATGACTTTGATGTCCA+AGG | 0.606799 | 3:+87895031 | MsG0380016784.01.T01:CDS |
| TGACTGTGGCTAGGAACAAG+AGG | 0.621274 | 3:-87895916 | None:intergenic |
| AGAAGAATGTACAAGCAGGA+AGG | 0.626181 | 3:-87895520 | None:intergenic |
| CAATGCAATTAATATATGCG+GGG | 0.641732 | 3:+87895012 | MsG0380016784.01.T01:CDS |
| TCCAAGGCCGTGTTTAACGA+AGG | 0.643908 | 3:+87895047 | MsG0380016784.01.T01:CDS |
| AACTCCACATGACTGTGGCT+AGG | 0.645634 | 3:-87895925 | None:intergenic |
| GTGGCAATTATAAAACTCAG+TGG | 0.651470 | 3:-87896592 | None:intergenic |
| AACGTAGTGGCTCACCCAAG+AGG | 0.652218 | 3:-87896630 | None:intergenic |
| CCACAAACTCCACATGACTG+TGG | 0.677605 | 3:-87895930 | None:intergenic |
| GTGAGCCACTACGTTTAGGG+AGG | 0.681752 | 3:+87896638 | MsG0380016784.01.T01:CDS |
| TGAAGATCAGGTGAAAACAG+AGG | 0.705419 | 3:+87896896 | MsG0380016784.01.T01:CDS |
| ACTCACCTCCCTAAACGTAG+TGG | 0.706985 | 3:-87896643 | None:intergenic |
| CGTAGCAGAAGTGTAAACAA+GGG | 0.709596 | 3:-87895474 | None:intergenic |
| GCATTGGTGATTGAGAAGAG+AGG | 0.709649 | 3:+87896544 | MsG0380016784.01.T01:CDS |
| TGTCGCGCAATCCGTAACTG+GGG | 0.718491 | 3:-87895809 | None:intergenic |
| TCTGTAGAAGACAAACACTG+AGG | 0.768975 | 3:-87895078 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTTTTTTTATTATA+TGG | + | Chr3:87895230-87895249 | MsG0380016784.01.T01:intron | 0.0% |
| !!! | TTATTTTAAATAATTTTTTT+TGG | - | Chr3:87896116-87896135 | None:intergenic | 0.0% |
| !! | AAAAAATATATATATCCAAA+AGG | - | Chr3:87896051-87896070 | None:intergenic | 10.0% |
| !!! | AAGTTTGTATACTATTTTAT+GGG | + | Chr3:87896809-87896828 | MsG0380016784.01.T01:CDS | 15.0% |
| !!! | ATTTTTATGCTTTCATTATT+TGG | + | Chr3:87895304-87895323 | MsG0380016784.01.T01:CDS | 15.0% |
| !!! | CTATTTTGATAAAGATTTTT+AGG | + | Chr3:87895377-87895396 | MsG0380016784.01.T01:intron | 15.0% |
| !!! | TAAGTTTGTATACTATTTTA+TGG | + | Chr3:87896808-87896827 | MsG0380016784.01.T01:CDS | 15.0% |
| !!! | TTTGATAATGAAAATGTATA+TGG | - | Chr3:87894951-87894970 | None:intergenic | 15.0% |
| !!! | TTTTTATGCTTTCATTATTT+GGG | + | Chr3:87895305-87895324 | MsG0380016784.01.T01:CDS | 15.0% |
| !! | AACAATGCAATTAATATATG+CGG | + | Chr3:87895010-87895029 | MsG0380016784.01.T01:CDS | 20.0% |
| !! | CATAATATCATCAAATTTAG+TGG | - | Chr3:87896453-87896472 | None:intergenic | 20.0% |
| !! | TCTTTATTATATGCTTGAAT+AGG | - | Chr3:87896873-87896892 | None:intergenic | 20.0% |
| !!! | ATTTGTTGCAGTTTAAATTA+GGG | + | Chr3:87896405-87896424 | MsG0380016784.01.T01:intron | 20.0% |
| !!! | CTAAAGTTCTAAATATAACA+GGG | + | Chr3:87896487-87896506 | MsG0380016784.01.T01:intron | 20.0% |
| !!! | GAGTTTTATTTCATTCATAA+TGG | - | Chr3:87896682-87896701 | None:intergenic | 20.0% |
| !!! | TAAAGTTCTAAATATAACAG+GGG | + | Chr3:87896488-87896507 | MsG0380016784.01.T01:intron | 20.0% |
| !!! | TATTTGTTGCAGTTTAAATT+AGG | + | Chr3:87896404-87896423 | MsG0380016784.01.T01:intron | 20.0% |
| ! | AAACAAAAAACTATGCTCAT+TGG | - | Chr3:87896941-87896960 | None:intergenic | 25.0% |
| ! | AAGCATAAAAATCTTGAAGA+TGG | - | Chr3:87895296-87895315 | None:intergenic | 25.0% |
| ! | ACAATGCAATTAATATATGC+GGG | + | Chr3:87895011-87895030 | MsG0380016784.01.T01:CDS | 25.0% |
| ! | ATCTTAATTATATCACAGCT+TGG | - | Chr3:87895985-87896004 | None:intergenic | 25.0% |
| ! | GATTGGAAAAGGTAAATATA+AGG | + | Chr3:87895708-87895727 | MsG0380016784.01.T01:intron | 25.0% |
| ! | GTAAATATAAGGACAATATC+TGG | + | Chr3:87895719-87895738 | MsG0380016784.01.T01:CDS | 25.0% |
| ! | GTCTTAAATGAGAATTTAAC+TGG | - | Chr3:87895274-87895293 | None:intergenic | 25.0% |
| ! | GTTTAATTAATTAGAGTGAC+CGG | + | Chr3:87895652-87895671 | MsG0380016784.01.T01:intron | 25.0% |
| ! | TAATAAAGAATGTGAAGATC+AGG | + | Chr3:87896884-87896903 | MsG0380016784.01.T01:CDS | 25.0% |
| !! | ATAATCATATTCATTTTCGC+CGG | - | Chr3:87895674-87895693 | None:intergenic | 25.0% |
| !! | CCTGTTATATTTAGAACTTT+AGG | - | Chr3:87896489-87896508 | None:intergenic | 25.0% |
| !! | TCTAGAATGATGAAACATTT+AGG | + | Chr3:87896004-87896023 | MsG0380016784.01.T01:intron | 25.0% |
| !!! | AAAGTTCTAAATATAACAGG+GGG | + | Chr3:87896489-87896508 | MsG0380016784.01.T01:intron | 25.0% |
| !!! | ACATGACAAAAAATGGATTT+TGG | + | Chr3:87895886-87895905 | MsG0380016784.01.T01:CDS | 25.0% |
| !!! | AGTTTTATAATTGCCACAAT+TGG | + | Chr3:87896598-87896617 | MsG0380016784.01.T01:CDS | 25.0% |
| !!! | CATGACAAAAAATGGATTTT+GGG | + | Chr3:87895887-87895906 | MsG0380016784.01.T01:CDS | 25.0% |
| !!! | CCTAAAGTTCTAAATATAAC+AGG | + | Chr3:87896486-87896505 | MsG0380016784.01.T01:intron | 25.0% |
| !!! | TAGTTTTTTGTTTTCTTTGC+TGG | + | Chr3:87896948-87896967 | MsG0380016784.01.T01:three_prime_UTR | 25.0% |
| !!! | TCTCTCTTTACATTATTTTG+AGG | - | Chr3:87897084-87897103 | None:intergenic | 25.0% |
| AAAGTTACCCTTCAAGATTA+AGG | + | Chr3:87896155-87896174 | MsG0380016784.01.T01:CDS | 30.0% | |
| AAATGAGAATTTAACTGGCA+CGG | - | Chr3:87895269-87895288 | None:intergenic | 30.0% | |
| AATATAGTGCACTTTGATGT+TGG | + | Chr3:87896359-87896378 | MsG0380016784.01.T01:intron | 30.0% | |
| AATATGACTATGAGTGAACT+AGG | + | Chr3:87894969-87894988 | MsG0380016784.01.T01:exon | 30.0% | |
| AATTGTTCTGTAATCCTACT+TGG | + | Chr3:87895408-87895427 | MsG0380016784.01.T01:intron | 30.0% | |
| AGCATCCTCAAAATTGAAAA+TGG | - | Chr3:87897050-87897069 | None:intergenic | 30.0% | |
| AGTGAGTGTATTATTGTGTA+TGG | + | Chr3:87895754-87895773 | MsG0380016784.01.T01:CDS | 30.0% | |
| ATTGTTAACACTGCCAAATA+TGG | - | Chr3:87894996-87895015 | None:intergenic | 30.0% | |
| CAATGCAATTAATATATGCG+GGG | + | Chr3:87895012-87895031 | MsG0380016784.01.T01:CDS | 30.0% | |
| GACACATAGTTATTAGAAAG+AGG | - | Chr3:87896992-87897011 | None:intergenic | 30.0% | |
| GTGAATCACATGACAAAAAA+TGG | + | Chr3:87895879-87895898 | MsG0380016784.01.T01:CDS | 30.0% | |
| GTTCAAATATCAAAGCCAAA+GGG | - | Chr3:87895130-87895149 | None:intergenic | 30.0% | |
| GTTTATAAAATTGCGCTCAT+TGG | + | Chr3:87897016-87897035 | MsG0380016784.01.T01:three_prime_UTR | 30.0% | |
| TATCATTTCTCTGTGTAGAT+TGG | + | Chr3:87895691-87895710 | MsG0380016784.01.T01:intron | 30.0% | |
| TCATGAACCTTAATCTTGAA+GGG | - | Chr3:87896165-87896184 | None:intergenic | 30.0% | |
| TTTCATTCCTTCGTTAAACA+CGG | - | Chr3:87895057-87895076 | None:intergenic | 30.0% | |
| ! | ATCATGAATTCTATGCCTTT+TGG | + | Chr3:87896033-87896052 | MsG0380016784.01.T01:intron | 30.0% |
| ! | ATTCTGAAAAACAACCAAGT+AGG | - | Chr3:87895425-87895444 | None:intergenic | 30.0% |
| !! | AGTAGCCATTTTCAATTTTG+AGG | + | Chr3:87897042-87897061 | MsG0380016784.01.T01:three_prime_UTR | 30.0% |
| !! | CTTTGGCTTTGATATTTGAA+CGG | + | Chr3:87895129-87895148 | MsG0380016784.01.T01:CDS | 30.0% |
| !! | TGCTTGTTTTTCAGTGTTTT+GGG | + | Chr3:87896768-87896787 | MsG0380016784.01.T01:intron | 30.0% |
| AAAAACTATGCTCATTGGAG+TGG | - | Chr3:87896936-87896955 | None:intergenic | 35.0% | |
| ACATCTGATCGATTACTTGA+AGG | - | Chr3:87897115-87897134 | None:intergenic | 35.0% | |
| AGTGTATTATTGTGTATGGC+TGG | + | Chr3:87895758-87895777 | MsG0380016784.01.T01:CDS | 35.0% | |
| CAAAACACTGAAAAACAAGC+AGG | - | Chr3:87896769-87896788 | None:intergenic | 35.0% | |
| CGTTCAAATATCAAAGCCAA+AGG | - | Chr3:87895131-87895150 | None:intergenic | 35.0% | |
| CTCATGAACCTTAATCTTGA+AGG | - | Chr3:87896166-87896185 | None:intergenic | 35.0% | |
| GTGGCAATTATAAAACTCAG+TGG | - | Chr3:87896595-87896614 | None:intergenic | 35.0% | |
| TGTGATGATATGATCCAGAT+AGG | - | Chr3:87895838-87895857 | None:intergenic | 35.0% | |
| TTCTCTGTGTAGATTGGAAA+AGG | + | Chr3:87895697-87895716 | MsG0380016784.01.T01:intron | 35.0% | |
| ! | GAGCGCAATTTTATAAACAC+TGG | - | Chr3:87897014-87897033 | None:intergenic | 35.0% |
| ! | GAGTTTGTGGATTGTATTTC+AGG | + | Chr3:87895943-87895962 | MsG0380016784.01.T01:CDS | 35.0% |
| ! | TGTGGATTGTATTTCAGGTA+AGG | + | Chr3:87895948-87895967 | MsG0380016784.01.T01:intron | 35.0% |
| ! | TTATGGGCTAAAAGCAAAGA+AGG | + | Chr3:87896825-87896844 | MsG0380016784.01.T01:CDS | 35.0% |
| ! | TTGAAAGAGATTTTGAGCAG+TGG | + | Chr3:87896236-87896255 | MsG0380016784.01.T01:CDS | 35.0% |
| !! | ACTTTAGCTTTGAATGTGCA+TGG | + | Chr3:87895446-87895465 | MsG0380016784.01.T01:CDS | 35.0% |
| !! | CTGCTTGTTTTTCAGTGTTT+TGG | + | Chr3:87896767-87896786 | MsG0380016784.01.T01:intron | 35.0% |
| !! | TGTTTTTCAGTGTTTTGGGT+GGG | + | Chr3:87896772-87896791 | MsG0380016784.01.T01:intron | 35.0% |
| !! | TTGTTTTTCAGTGTTTTGGG+TGG | + | Chr3:87896771-87896790 | MsG0380016784.01.T01:intron | 35.0% |
| ACTGATTGGAGCCATGATTA+TGG | + | Chr3:87895103-87895122 | MsG0380016784.01.T01:CDS | 40.0% | |
| AGAAGAATGTACAAGCAGGA+AGG | - | Chr3:87895523-87895542 | None:intergenic | 40.0% | |
| GAGTGAACTAGGTCCATATT+TGG | + | Chr3:87894980-87894999 | MsG0380016784.01.T01:CDS | 40.0% | |
| GCAAAGAAGAATGTACAAGC+AGG | - | Chr3:87895527-87895546 | None:intergenic | 40.0% | |
| GTCTTCTACAGACAACTGAT+TGG | + | Chr3:87895089-87895108 | MsG0380016784.01.T01:CDS | 40.0% | |
| TCTGTAGAAGACAAACACTG+AGG | - | Chr3:87895081-87895100 | None:intergenic | 40.0% | |
| TGAAGATCAGGTGAAAACAG+AGG | + | Chr3:87896896-87896915 | MsG0380016784.01.T01:CDS | 40.0% | |
| TGTTCTGCTCAGGTAAAGTT+TGG | + | Chr3:87895547-87895566 | MsG0380016784.01.T01:intron | 40.0% | |
| TGTTTACACTTCTGCTACGT+TGG | + | Chr3:87895478-87895497 | MsG0380016784.01.T01:CDS | 40.0% | |
| TTCCAAGTTGCTGAGAAAAC+TGG | - | Chr3:87896571-87896590 | None:intergenic | 40.0% | |
| TTCCTATTACCTGCAAGCAT+TGG | + | Chr3:87896528-87896547 | MsG0380016784.01.T01:CDS | 40.0% | |
| TTTACAAAGGACCCCAGTTA+CGG | + | Chr3:87895798-87895817 | MsG0380016784.01.T01:CDS | 40.0% | |
| ! | ACGTAGCAGAAGTGTAAACA+AGG | - | Chr3:87895478-87895497 | None:intergenic | 40.0% |
| ! | CGTAGCAGAAGTGTAAACAA+GGG | - | Chr3:87895477-87895496 | None:intergenic | 40.0% |
| ! | GATTTTGAGCAGTGGAAGTT+AGG | + | Chr3:87896244-87896263 | MsG0380016784.01.T01:CDS | 40.0% |
| ! | GCGATTCTGGCATTTTACAA+AGG | + | Chr3:87895785-87895804 | MsG0380016784.01.T01:CDS | 40.0% |
| !! | AATTGGTTCTGTCTTCCTCT+TGG | + | Chr3:87896615-87896634 | MsG0380016784.01.T01:CDS | 40.0% |
| !! | ATTGGTTCTGTCTTCCTCTT+GGG | + | Chr3:87896616-87896635 | MsG0380016784.01.T01:CDS | 40.0% |
| AGCCAAAGGGACCATAATCA+TGG | - | Chr3:87895117-87895136 | None:intergenic | 45.0% | |
| AGCCATGATTATGGTCCCTT+TGG | + | Chr3:87895112-87895131 | MsG0380016784.01.T01:CDS | 45.0% | |
| CACCAATGCTTGCAGGTAAT+AGG | - | Chr3:87896533-87896552 | None:intergenic | 45.0% | |
| CTATGCTCATTGGAGTGGTT+TGG | - | Chr3:87896931-87896950 | None:intergenic | 45.0% | |
| GAGGAAGACAGAACCAATTG+TGG | - | Chr3:87896614-87896633 | None:intergenic | 45.0% | |
| TCTCAATCACCAATGCTTGC+AGG | - | Chr3:87896540-87896559 | None:intergenic | 45.0% | |
| TTGAGCAGTGGAAGTTAGGT+TGG | + | Chr3:87896248-87896267 | MsG0380016784.01.T01:CDS | 45.0% | |
| ! | GACCAGTTTTCTCAGCAACT+TGG | + | Chr3:87896566-87896585 | MsG0380016784.01.T01:CDS | 45.0% |
| ! | GCATTGGTGATTGAGAAGAG+AGG | + | Chr3:87896544-87896563 | MsG0380016784.01.T01:CDS | 45.0% |
| !! | TCTTCTTTGCTGTTCTGCTC+AGG | + | Chr3:87895537-87895556 | MsG0380016784.01.T01:CDS | 45.0% |
| !!! | AAATTATTTAAAATAAAAAC+AGG | + | Chr3:87896120-87896139 | MsG0380016784.01.T01:intron | 5.0% |
| AACTCCACATGACTGTGGCT+AGG | - | Chr3:87895928-87895947 | None:intergenic | 50.0% | |
| ACTCACCTCCCTAAACGTAG+TGG | - | Chr3:87896646-87896665 | None:intergenic | 50.0% | |
| ATGTCGCGCAATCCGTAACT+GGG | - | Chr3:87895813-87895832 | None:intergenic | 50.0% | |
| ATTGCGCGACATCTCCTATC+TGG | + | Chr3:87895821-87895840 | MsG0380016784.01.T01:CDS | 50.0% | |
| CCACAAACTCCACATGACTG+TGG | - | Chr3:87895933-87895952 | None:intergenic | 50.0% | |
| CCACAGTCATGTGGAGTTTG+TGG | + | Chr3:87895930-87895949 | MsG0380016784.01.T01:CDS | 50.0% | |
| GGGGATGACTTTGATGTCCA+AGG | + | Chr3:87895031-87895050 | MsG0380016784.01.T01:CDS | 50.0% | |
| TCCAAGGCCGTGTTTAACGA+AGG | + | Chr3:87895047-87895066 | MsG0380016784.01.T01:CDS | 50.0% | |
| TCCTTCGTTAAACACGGCCT+TGG | - | Chr3:87895051-87895070 | None:intergenic | 50.0% | |
| TGACTGTGGCTAGGAACAAG+AGG | - | Chr3:87895919-87895938 | None:intergenic | 50.0% | |
| TGGGTGAGCCACTACGTTTA+GGG | + | Chr3:87896635-87896654 | MsG0380016784.01.T01:CDS | 50.0% | |
| TGTTCCTAGCCACAGTCATG+TGG | + | Chr3:87895921-87895940 | MsG0380016784.01.T01:CDS | 50.0% | |
| TTGGGTGAGCCACTACGTTT+AGG | + | Chr3:87896634-87896653 | MsG0380016784.01.T01:CDS | 50.0% | |
| !! | TAACAGGGGGTACTAGTGAC+TGG | + | Chr3:87896502-87896521 | MsG0380016784.01.T01:intron | 50.0% |
| !! | TGTTTTGGGTGGGATTGTGC+TGG | + | Chr3:87896782-87896801 | MsG0380016784.01.T01:CDS | 50.0% |
| AACGTAGTGGCTCACCCAAG+AGG | - | Chr3:87896633-87896652 | None:intergenic | 55.0% | |
| GATGTCGCGCAATCCGTAAC+TGG | - | Chr3:87895814-87895833 | None:intergenic | 55.0% | |
| GTGAGCCACTACGTTTAGGG+AGG | + | Chr3:87896638-87896657 | MsG0380016784.01.T01:CDS | 55.0% | |
| TATGGCTGGCGTAGCGATTC+TGG | + | Chr3:87895772-87895791 | MsG0380016784.01.T01:CDS | 55.0% | |
| TGTCGCGCAATCCGTAACTG+GGG | - | Chr3:87895812-87895831 | None:intergenic | 55.0% | |
| ! | AACTGGCACGGCTTGTTTGC+TGG | - | Chr3:87895257-87895276 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 87894937 | 87897144 | 87894937 | ID=MsG0380016784.01;Name=MsG0380016784.01 |
| Chr3 | mRNA | 87894937 | 87897144 | 87894937 | ID=MsG0380016784.01.T01;Parent=MsG0380016784.01;Name=MsG0380016784.01.T01;_AED=0.40;_eAED=0.40;_QI=35|1|1|1|1|1|7|200|364 |
| Chr3 | exon | 87894937 | 87895150 | 87894937 | ID=MsG0380016784.01.T01:exon:22309;Parent=MsG0380016784.01.T01 |
| Chr3 | exon | 87895258 | 87895326 | 87895258 | ID=MsG0380016784.01.T01:exon:22310;Parent=MsG0380016784.01.T01 |
| Chr3 | exon | 87895442 | 87895558 | 87895442 | ID=MsG0380016784.01.T01:exon:22311;Parent=MsG0380016784.01.T01 |
| Chr3 | exon | 87895709 | 87895964 | 87895709 | ID=MsG0380016784.01.T01:exon:22312;Parent=MsG0380016784.01.T01 |
| Chr3 | exon | 87896142 | 87896300 | 87896142 | ID=MsG0380016784.01.T01:exon:22313;Parent=MsG0380016784.01.T01 |
| Chr3 | exon | 87896508 | 87896659 | 87896508 | ID=MsG0380016784.01.T01:exon:22314;Parent=MsG0380016784.01.T01 |
| Chr3 | exon | 87896782 | 87897144 | 87896782 | ID=MsG0380016784.01.T01:exon:22315;Parent=MsG0380016784.01.T01 |
| Chr3 | five_prime_UTR | 87894937 | 87894971 | 87894937 | ID=MsG0380016784.01.T01:five_prime_utr;Parent=MsG0380016784.01.T01 |
| Chr3 | CDS | 87894972 | 87895150 | 87894972 | ID=MsG0380016784.01.T01:cds;Parent=MsG0380016784.01.T01 |
| Chr3 | CDS | 87895258 | 87895326 | 87895258 | ID=MsG0380016784.01.T01:cds;Parent=MsG0380016784.01.T01 |
| Chr3 | CDS | 87895442 | 87895558 | 87895442 | ID=MsG0380016784.01.T01:cds;Parent=MsG0380016784.01.T01 |
| Chr3 | CDS | 87895709 | 87895964 | 87895709 | ID=MsG0380016784.01.T01:cds;Parent=MsG0380016784.01.T01 |
| Chr3 | CDS | 87896142 | 87896300 | 87896142 | ID=MsG0380016784.01.T01:cds;Parent=MsG0380016784.01.T01 |
| Chr3 | CDS | 87896508 | 87896659 | 87896508 | ID=MsG0380016784.01.T01:cds;Parent=MsG0380016784.01.T01 |
| Chr3 | CDS | 87896782 | 87896944 | 87896782 | ID=MsG0380016784.01.T01:cds;Parent=MsG0380016784.01.T01 |
| Chr3 | three_prime_UTR | 87896945 | 87897144 | 87896945 | ID=MsG0380016784.01.T01:three_prime_utr;Parent=MsG0380016784.01.T01 |
| Gene Sequence |
| Protein sequence |
