AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016947.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016947.01.T01 MTR_3g099260 58.889 90 35 2 157 245 72 160 1.09e-28 107
MsG0380016947.01.T01 MTR_5g032090 33.742 163 105 2 98 257 266 428 1.52e-24 102
MsG0380016947.01.T01 MTR_3g100280 33.742 163 105 2 98 257 278 440 4.39e-24 101
MsG0380016947.01.T01 MTR_3g100280 33.742 163 105 2 98 257 115 277 6.47e-24 100
MsG0380016947.01.T01 MTR_3g100320 32.515 163 107 2 98 257 269 431 8.71e-24 100
MsG0380016947.01.T01 MTR_3g100320 33.793 145 93 2 98 239 281 425 9.15e-20 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016947.01.T01 AT5G10490 30.675 163 110 2 98 257 241 403 1.22e-22 97.1
MsG0380016947.01.T01 AT5G10490 30.675 163 110 2 98 257 267 429 1.32e-22 97.1
MsG0380016947.01.T01 AT5G10490 30.675 163 110 2 98 257 269 431 1.51e-22 97.1
MsG0380016947.01.T01 AT1G58200 30.675 163 110 2 98 257 271 433 1.25e-20 91.3
MsG0380016947.01.T01 AT1G58200 30.675 163 110 2 98 257 271 433 1.25e-20 91.3

Find 67 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTTGTTCATGGGATTTC+AGG 0.152979 3:-89833218 MsG0380016947.01.T01:CDS
ATGGTTTGTTGACGCGAATT+TGG 0.255946 3:-89833098 MsG0380016947.01.T01:CDS
CGAAGTTTCCGGTACTCTTC+AGG 0.290963 3:-89832725 MsG0380016947.01.T01:intron
TGGTTTGTTGACGCGAATTT+GGG 0.337244 3:-89833097 MsG0380016947.01.T01:CDS
GACTTTGGCAAGATGTTTAC+CGG 0.349233 3:-89832874 MsG0380016947.01.T01:CDS
GGCAAGATGTTTACCGGAAT+GGG 0.350360 3:-89832868 MsG0380016947.01.T01:CDS
GGTTCATGGGATTTCAGAAT+TGG 0.352213 3:-89833141 MsG0380016947.01.T01:CDS
GGTTCATGGGATTTCAGAAT+TGG 0.352213 3:-89833192 MsG0380016947.01.T01:CDS
CATGTTTCCACAATGGTTGC+AGG 0.358145 3:-89833260 MsG0380016947.01.T01:CDS
TCAATATTCAGTTTCTCAAC+TGG 0.367640 3:+89828792 None:intergenic
CGCGAATTTGGGTTTGAGAA+TGG 0.373836 3:-89833086 MsG0380016947.01.T01:CDS
AAGCATGGATGTTCCCATTC+CGG 0.378820 3:+89832855 None:intergenic
CACGACGGAGTCGAAGTTTC+CGG 0.383689 3:-89832736 MsG0380016947.01.T01:CDS
TGTTCATGGGATTTCAGGAT+TGG 0.389407 3:-89833213 MsG0380016947.01.T01:CDS
GGGATTTCAGGATTGGTTCA+TGG 0.397408 3:-89833155 MsG0380016947.01.T01:CDS
GGGATTTCAGGATTGGTTCA+TGG 0.397408 3:-89833206 MsG0380016947.01.T01:CDS
CTGAACAACTATGTGGACTT+TGG 0.401016 3:-89832889 MsG0380016947.01.T01:CDS
TCATTGTAGAGTATTCTAAC+TGG 0.403512 3:-89827385 MsG0380016947.01.T01:intron
TGGGATTTCAGAATTGGCTT+AGG 0.410372 3:-89833135 MsG0380016947.01.T01:CDS
TGGGATTTCAGAATTGGCTT+AGG 0.410372 3:-89833186 MsG0380016947.01.T01:CDS
TTATGAATGGAGAGATCGTT+AGG 0.415316 3:-89828887 MsG0380016947.01.T01:CDS
TCAGTTACGATCTTTGTTCA+TGG 0.419089 3:-89833227 MsG0380016947.01.T01:CDS
TGTGTCACAGGGCATGGCTT+TGG 0.424648 3:-89832948 MsG0380016947.01.T01:intron
AAATTAAACACTTACCCCTA+TGG 0.439714 3:+89827273 None:intergenic
GGATTTCAGGATTGGTTCAT+GGG 0.444281 3:-89833154 MsG0380016947.01.T01:CDS
GGATTTCAGGATTGGTTCAT+GGG 0.444281 3:-89833205 MsG0380016947.01.T01:CDS
TTCAAAAGAATGCATTGATT+CGG 0.448508 3:+89832760 None:intergenic
CAGTTACGATCTTTGTTCAT+GGG 0.449925 3:-89833226 MsG0380016947.01.T01:CDS
TGCAAAACGGTACTCACAAC+GGG 0.462464 3:-89828833 MsG0380016947.01.T01:CDS
TGGCAAGATGTTTACCGGAA+TGG 0.462951 3:-89832869 MsG0380016947.01.T01:CDS
TCTTCAGTTCGACTTATGAA+TGG 0.464306 3:-89828900 MsG0380016947.01.T01:CDS
GGGATTTCAGAATTGGCTTA+GGG 0.470420 3:-89833134 MsG0380016947.01.T01:CDS
GGGATTTCAGAATTGGCTTA+GGG 0.470420 3:-89833185 MsG0380016947.01.T01:CDS
GGGTTTGAGAATGGCAAGTG+TGG 0.473499 3:-89833077 MsG0380016947.01.T01:CDS
GTCACAGGGCATGGCTTTGG+TGG 0.475807 3:-89832945 MsG0380016947.01.T01:intron
GTTCACTTTGATGCCGCTCC+TGG 0.485705 3:-89827307 MsG0380016947.01.T01:CDS
AACTGGAATGGCTGGCGTGT+TGG 0.490100 3:-89827368 MsG0380016947.01.T01:CDS
CTGGTAGTACACAGACCATA+GGG 0.502672 3:-89827288 MsG0380016947.01.T01:CDS
GGTTTGAGAATGGCAAGTGT+GGG 0.510223 3:-89833076 MsG0380016947.01.T01:CDS
AAGGAACGAGTCGTAATCAT+TGG 0.510752 3:+89826999 None:intergenic
GAAGTGAGAGCGAAAGAGTA+TGG 0.516941 3:+89833324 None:intergenic
ACCGACAACATTGTGCAAAA+CGG 0.532161 3:-89828846 MsG0380016947.01.T01:CDS
AGTATTCTAACTGGAATGGC+TGG 0.533707 3:-89827376 MsG0380016947.01.T01:CDS
CACTTCACACGAGATTCAAA+CGG 0.534281 3:-89833307 MsG0380016947.01.T01:five_prime_UTR
TCCATGCTTCAAGATGGTGC+TGG 0.538157 3:-89832841 MsG0380016947.01.T01:CDS
CGACTCGTTCCTTACCATGA+AGG 0.540033 3:-89826989 MsG0380016947.01.T01:CDS
AATTCGCGTCAACAAACCAT+TGG 0.553107 3:+89833101 None:intergenic
GTAGAGTATTCTAACTGGAA+TGG 0.554593 3:-89827380 MsG0380016947.01.T01:intron
CCATGCTTCAAGATGGTGCT+GGG 0.558325 3:-89832840 MsG0380016947.01.T01:CDS
GTAGCTAACCTGAAGAGTAC+CGG 0.562698 3:+89832717 None:intergenic
TGTCGGTGAGCTTGTCCGTA+GGG 0.566628 3:+89828862 None:intergenic
CCTATGGTCTGTGTACTACC+AGG 0.568324 3:+89827289 None:intergenic
CCCAGCACCATCTTGAAGCA+TGG 0.570105 3:+89832840 None:intergenic
CCTGGTAGTACACAGACCAT+AGG 0.574288 3:-89827289 MsG0380016947.01.T01:CDS
TTGTCGGTGAGCTTGTCCGT+AGG 0.577098 3:+89828861 None:intergenic
GGAACATCCATGCTTCAAGA+TGG 0.598849 3:-89832847 MsG0380016947.01.T01:CDS
ATCACCTCCTGCAACCATTG+TGG 0.602505 3:+89833253 None:intergenic
TATGAATGGAGAGATCGTTA+GGG 0.603650 3:-89828886 MsG0380016947.01.T01:CDS
AGAGATCGTTAGGGTCCCTA+CGG 0.617275 3:-89828877 MsG0380016947.01.T01:CDS
ACTGAATATTGACAAACTGA+AGG 0.623913 3:-89828781 MsG0380016947.01.T01:intron
GTGCAAAACGGTACTCACAA+CGG 0.624848 3:-89828834 MsG0380016947.01.T01:CDS
GCGAAGTCATGTTTCCACAA+TGG 0.642299 3:-89833267 MsG0380016947.01.T01:exon
GTTTGAGAATGGCAAGTGTG+GGG 0.644680 3:-89833075 MsG0380016947.01.T01:intron
GTTTCCACAATGGTTGCAGG+AGG 0.651802 3:-89833257 MsG0380016947.01.T01:CDS
GGTCTGTGTACTACCAGGAG+CGG 0.685622 3:+89827294 None:intergenic
TGGTAGTACACAGACCATAG+GGG 0.703283 3:-89827287 MsG0380016947.01.T01:intron
CAAACGGCGAAAAGAAAACG+CGG 0.715657 3:-89833291 MsG0380016947.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATTTGATTAAGAAAAT+TGG + Chr3:89830203-89830222 None:intergenic 10.0%
!!! TTGTTTTTAATTTAAAAGTT+TGG - Chr3:89829306-89829325 MsG0380016947.01.T01:intron 10.0%
!! AATAAACGTTAATTGAATAA+AGG + Chr3:89831852-89831871 None:intergenic 15.0%
!! AGAGAAGAAAAAAAAAATAT+GGG + Chr3:89828913-89828932 None:intergenic 15.0%
!! ATAAGAAAATAATTGTAGAA+AGG + Chr3:89832126-89832145 None:intergenic 15.0%
!! ATATAACTGAATAAGATTAT+AGG - Chr3:89829473-89829492 MsG0380016947.01.T01:intron 15.0%
!! TATTTAATACATGATGAATT+TGG + Chr3:89829166-89829185 None:intergenic 15.0%
!! TTCTAAACCAATTAAAAAAA+AGG + Chr3:89833102-89833121 None:intergenic 15.0%
!!! AATTTTAGGGTTTATAAATT+AGG + Chr3:89827348-89827367 None:intergenic 15.0%
!!! ATATTTTTTTTTTCTTCTCT+GGG - Chr3:89828913-89828932 MsG0380016947.01.T01:CDS 15.0%
!!! GTGATTAGAATATTTTAAAA+TGG - Chr3:89831757-89831776 MsG0380016947.01.T01:intron 15.0%
!!! TAATCAAATAATTGTTTTCT+TGG - Chr3:89830210-89830229 MsG0380016947.01.T01:intron 15.0%
!!! TTTCTACAATTATTTTCTTA+TGG - Chr3:89832125-89832144 MsG0380016947.01.T01:intron 15.0%
!!! TTTTTTTTTTTCAAGTATCA+TGG + Chr3:89829514-89829533 None:intergenic 15.0%
!! AAAATAACTATATGCATTCA+AGG + Chr3:89828771-89828790 None:intergenic 20.0%
!! AAACTTATACATAATCCAAA+AGG + Chr3:89828130-89828149 None:intergenic 20.0%
!! AACCTTAAATCTTTCAAATA+TGG + Chr3:89827961-89827980 None:intergenic 20.0%
!! AAGATGTTTGTGAATTATAT+TGG - Chr3:89828313-89828332 MsG0380016947.01.T01:intron 20.0%
!! AATAAATAACATCACTAACT+TGG + Chr3:89828085-89828104 None:intergenic 20.0%
!! AATAATTGTGAGGTAATTAT+AGG + Chr3:89830127-89830146 None:intergenic 20.0%
!! AATTAAAAACAAAACAACAC+AGG + Chr3:89829298-89829317 None:intergenic 20.0%
!! AATTGTATTTGTAGTATTTG+AGG - Chr3:89830278-89830297 MsG0380016947.01.T01:intron 20.0%
!! ATCGATAAAGGTAATTAATA+GGG - Chr3:89831069-89831088 MsG0380016947.01.T01:intron 20.0%
!! ATTGAAATTCCTTCTTTATA+AGG - Chr3:89828993-89829012 MsG0380016947.01.T01:intron 20.0%
!! CAAATCTATGAAATCAAAAT+TGG - Chr3:89832032-89832051 MsG0380016947.01.T01:intron 20.0%
!! CAGAGAAGAAAAAAAAAATA+TGG + Chr3:89828914-89828933 None:intergenic 20.0%
!! CAGTTATATAGTTCTTATTA+AGG + Chr3:89829462-89829481 None:intergenic 20.0%
!! CTTTATCCCTTTAATATTTA+GGG - Chr3:89828729-89828748 MsG0380016947.01.T01:intron 20.0%
!! GAATGATCTAATATTCAATT+TGG + Chr3:89828209-89828228 None:intergenic 20.0%
!! TATCGATAAAGGTAATTAAT+AGG - Chr3:89831068-89831087 MsG0380016947.01.T01:intron 20.0%
!! TCTATCATAATCTACAAAAA+TGG + Chr3:89831598-89831617 None:intergenic 20.0%
!! TTCCATATTTGAAAGATTTA+AGG - Chr3:89827956-89827975 MsG0380016947.01.T01:intron 20.0%
!! TTGAAATTCCTTCTTTATAA+GGG - Chr3:89828994-89829013 MsG0380016947.01.T01:intron 20.0%
!! TTTCCTTATTCTTTCTAATA+AGG - Chr3:89833126-89833145 MsG0380016947.01.T01:CDS 20.0%
!!! AAAATGTAATCGGAATTTTA+GGG + Chr3:89827361-89827380 None:intergenic 20.0%
!!! AAATTAGGTTTTACAAAGAT+AGG + Chr3:89827333-89827352 None:intergenic 20.0%
!!! AATCTGATTTTTGTAGTAAA+GGG - Chr3:89829226-89829245 MsG0380016947.01.T01:intron 20.0%
!!! AATTAGGTTTTACAAAGATA+GGG + Chr3:89827332-89827351 None:intergenic 20.0%
!!! AGATAGATTATTGATTGATA+CGG - Chr3:89831731-89831750 MsG0380016947.01.T01:intron 20.0%
!!! ATATTAGATCATTCTTTTCT+TGG - Chr3:89828215-89828234 MsG0380016947.01.T01:intron 20.0%
!!! ATATTGATTGATGTGTTTTT+TGG - Chr3:89831022-89831041 MsG0380016947.01.T01:intron 20.0%
!!! ATGATATGATTTTTTGTTGT+TGG - Chr3:89828703-89828722 MsG0380016947.01.T01:intron 20.0%
!!! ATTTTATCACTATTATACGA+TGG + Chr3:89831968-89831987 None:intergenic 20.0%
!!! CAATTTTGATTTCATAGATT+TGG + Chr3:89832034-89832053 None:intergenic 20.0%
!!! CATATTTTTTTTTTCTTCTC+TGG - Chr3:89828912-89828931 MsG0380016947.01.T01:CDS 20.0%
!!! TAATCTGATTTTTGTAGTAA+AGG - Chr3:89829225-89829244 MsG0380016947.01.T01:intron 20.0%
!!! TAGAAGACAAGATTTATTTT+AGG + Chr3:89828852-89828871 None:intergenic 20.0%
!!! TTTTCATTAGAACTAGAAAA+TGG - Chr3:89828504-89828523 MsG0380016947.01.T01:intron 20.0%
!!! TTTTTTAATTGGTTTAGAAC+CGG - Chr3:89833103-89833122 MsG0380016947.01.T01:CDS 20.0%
! AAAAAAATCCTTAATTGCAC+AGG - Chr3:89830463-89830482 MsG0380016947.01.T01:intron 25.0%
! AAAAACATAAGCTACAAAAG+TGG + Chr3:89832894-89832913 None:intergenic 25.0%
! AAAATGTGTGTTTATTGATG+TGG - Chr3:89829046-89829065 MsG0380016947.01.T01:intron 25.0%
! AAAATTAAAATCTACGACGT+AGG - Chr3:89828460-89828479 MsG0380016947.01.T01:intron 25.0%
! AAATTAAAATCTACGACGTA+GGG - Chr3:89828461-89828480 MsG0380016947.01.T01:intron 25.0%
! ACAATAATAATTCACCTATC+AGG + Chr3:89832790-89832809 None:intergenic 25.0%
! ATATAACATGCAAACAAACT+TGG + Chr3:89831357-89831376 None:intergenic 25.0%
! ATATCATGTAGTTTCTTAAG+TGG - Chr3:89827721-89827740 MsG0380016947.01.T01:intron 25.0%
! ATCTATGAAATCAAAATTGG+AGG - Chr3:89832035-89832054 MsG0380016947.01.T01:intron 25.0%
! ATGTAATCAATTCTTTCATG+CGG + Chr3:89829657-89829676 None:intergenic 25.0%
! ATTAGAAAGAATAAGGAAAC+CGG + Chr3:89833125-89833144 None:intergenic 25.0%
! ATTATGATAGAATTGTTGCT+TGG - Chr3:89831607-89831626 MsG0380016947.01.T01:intron 25.0%
! ATTGAAAGTAAATAACTAGC+AGG + Chr3:89830027-89830046 None:intergenic 25.0%
! CTCATTCCCTAAATATTAAA+GGG + Chr3:89828738-89828757 None:intergenic 25.0%
! CTGATAGTTGAAACATATAT+GGG - Chr3:89830997-89831016 MsG0380016947.01.T01:intron 25.0%
! GCAAATTATAATTCATGCAT+AGG + Chr3:89828637-89828656 None:intergenic 25.0%
! GCTTTATCCCTTTAATATTT+AGG - Chr3:89828728-89828747 MsG0380016947.01.T01:intron 25.0%
! TAATTTCAAAACCAGTAAAC+TGG - Chr3:89833072-89833091 MsG0380016947.01.T01:intron 25.0%
! TATAGAAAAGCTATCCTTTA+AGG + Chr3:89830422-89830441 None:intergenic 25.0%
! TCAAGTTATCCTTAATTGAA+AGG + Chr3:89829967-89829986 None:intergenic 25.0%
! TCAATTTCGACAACTAATAT+AGG - Chr3:89832159-89832178 MsG0380016947.01.T01:intron 25.0%
! TCTCATTCCCTAAATATTAA+AGG + Chr3:89828739-89828758 None:intergenic 25.0%
! TGAAATTCTAATTCCTAACT+CGG + Chr3:89827769-89827788 None:intergenic 25.0%
! TTACAAATCCCTTATAAAGA+AGG + Chr3:89829005-89829024 None:intergenic 25.0%
! TTTAATATGACAGACTACAA+AGG + Chr3:89829702-89829721 None:intergenic 25.0%
! TTTATAAGGGATTTGTAAGT+TGG - Chr3:89829007-89829026 MsG0380016947.01.T01:intron 25.0%
! TTTATGTTTAATGTTGAGAG+TGG - Chr3:89832283-89832302 MsG0380016947.01.T01:intron 25.0%
!! AAAAGGTATAGGAATTCAAT+TGG - Chr3:89830505-89830524 MsG0380016947.01.T01:intron 25.0%
!! AAAGGTATAGGAATTCAATT+GGG - Chr3:89830506-89830525 MsG0380016947.01.T01:intron 25.0%
!! AAATTTTTGCTTCTACCTTT+TGG - Chr3:89828112-89828131 MsG0380016947.01.T01:intron 25.0%
!! ATAAGTACAATCAGATTTTG+CGG - Chr3:89828812-89828831 MsG0380016947.01.T01:CDS 25.0%
!! CAAAATGTAATCGGAATTTT+AGG + Chr3:89827362-89827381 None:intergenic 25.0%
!! TACTATCAGCATTTTACAAT+TGG + Chr3:89827817-89827836 None:intergenic 25.0%
!! TAGCTTTTCTATATAAGTCA+TGG - Chr3:89830429-89830448 MsG0380016947.01.T01:intron 25.0%
!! TATTTCTATGTACCTTGTTA+TGG - Chr3:89829558-89829577 MsG0380016947.01.T01:intron 25.0%
!! TTCTAATTTTCCATGAAGTT+TGG - Chr3:89828867-89828886 MsG0380016947.01.T01:CDS 25.0%
!! TTTGGAAAAGTGTAGTAATT+CGG + Chr3:89832016-89832035 None:intergenic 25.0%
!!! ATATGATTTTTTGTTGTTGG+AGG - Chr3:89828706-89828725 MsG0380016947.01.T01:intron 25.0%
!!! CTCTGCTTTTAGTTAATTAA+TGG + Chr3:89831252-89831271 None:intergenic 25.0%
!!! TGATCTTTTTCATAAATTCC+TGG - Chr3:89830677-89830696 MsG0380016947.01.T01:intron 25.0%
!!! TGGTGAACCTTTTTTTTAAT+TGG - Chr3:89833092-89833111 MsG0380016947.01.T01:CDS 25.0%
!!! TTACTTCTTTTTCAGAACAT+AGG - Chr3:89831392-89831411 MsG0380016947.01.T01:intron 25.0%
!!! TTCAAAAGAATGCATTGATT+CGG + Chr3:89827571-89827590 None:intergenic 25.0%
AAATTAAACACTTACCCCTA+TGG + Chr3:89833058-89833077 None:intergenic 30.0%
AACATCAAAAACAGGATGTA+TGG + Chr3:89831802-89831821 None:intergenic 30.0%
AACTCAAAGTGTAGGAAAAT+TGG + Chr3:89830055-89830074 None:intergenic 30.0%
AAGATCAATTTCCCTTTCAA+TGG + Chr3:89830664-89830683 None:intergenic 30.0%
ACTGAATATTGACAAACTGA+AGG - Chr3:89831547-89831566 MsG0380016947.01.T01:intron 30.0%
ACTTCACTTATGCTAGAAAA+AGG + Chr3:89829143-89829162 None:intergenic 30.0%
ACTTTATGTTCCTGATAGAA+TGG - Chr3:89832236-89832255 MsG0380016947.01.T01:intron 30.0%
AGAAAAACCAAAAAGACGTA+CGG + Chr3:89827421-89827440 None:intergenic 30.0%
AGCAGAGACAATTTATACTA+GGG + Chr3:89828184-89828203 None:intergenic 30.0%
AGGTGAATTATTATTGTGAC+TGG - Chr3:89832793-89832812 MsG0380016947.01.T01:CDS 30.0%
ATCAAAGCATGACATTCAAA+TGG + Chr3:89828277-89828296 None:intergenic 30.0%
ATCCAAGCTAATTTCATTGA+TGG - Chr3:89833273-89833292 MsG0380016947.01.T01:exon 30.0%
ATCTGACAAAATGTAACAAG+AGG + Chr3:89827294-89827313 None:intergenic 30.0%
ATGAAATCAAAATTGGAGGT+AGG - Chr3:89832039-89832058 MsG0380016947.01.T01:intron 30.0%
ATGTGTATACCAGTAGTATT+GGG - Chr3:89830537-89830556 MsG0380016947.01.T01:intron 30.0%
ATTATAGTTGTGCTAGAGAA+AGG + Chr3:89829824-89829843 None:intergenic 30.0%
ATTCACAAACATCTTACCAA+TGG + Chr3:89828308-89828327 None:intergenic 30.0%
CTTTATGTTCCTGATAGAAT+GGG - Chr3:89832237-89832256 MsG0380016947.01.T01:intron 30.0%
GAGAATTACATTTGCATTTC+AGG + Chr3:89830756-89830775 None:intergenic 30.0%
GATTAAGAAAATTGGATCAC+AGG + Chr3:89830195-89830214 None:intergenic 30.0%
GATTATTGTGAGGATGTATA+CGG - Chr3:89832566-89832585 MsG0380016947.01.T01:intron 30.0%
GCTGATAGTTGAAACATATA+TGG - Chr3:89830996-89831015 MsG0380016947.01.T01:intron 30.0%
GGTTGTATTCACATTTAAGA+TGG - Chr3:89831157-89831176 MsG0380016947.01.T01:intron 30.0%
GTCACGATTAATTTCCTTAA+AGG - Chr3:89830405-89830424 MsG0380016947.01.T01:intron 30.0%
GTTTCATGAAAAAGTAATCC+AGG + Chr3:89830698-89830717 None:intergenic 30.0%
TACACGTGTTATAATTTGGT+TGG + Chr3:89831827-89831846 None:intergenic 30.0%
TAGCAGAGACAATTTATACT+AGG + Chr3:89828185-89828204 None:intergenic 30.0%
TATCACTGTCCTTTCAATTA+AGG - Chr3:89829955-89829974 MsG0380016947.01.T01:intron 30.0%
TATCAGTTCACTTAACAGAT+AGG - Chr3:89830629-89830648 MsG0380016947.01.T01:intron 30.0%
TATGTGTATACCAGTAGTAT+TGG - Chr3:89830536-89830555 MsG0380016947.01.T01:intron 30.0%
TCAATATTCAGTTTCTCAAC+TGG + Chr3:89831539-89831558 None:intergenic 30.0%
TCAGAATGGCATCATTAATT+TGG - Chr3:89831635-89831654 MsG0380016947.01.T01:intron 30.0%
TCCAATGTATTACATTGAGT+AGG + Chr3:89830153-89830172 None:intergenic 30.0%
TCCTACTCAATGTAATACAT+TGG - Chr3:89830149-89830168 MsG0380016947.01.T01:intron 30.0%
TGACAAAAATCCAAACTTCA+TGG + Chr3:89828880-89828899 None:intergenic 30.0%
TTATCACTATTATACGATGG+AGG + Chr3:89831965-89831984 None:intergenic 30.0%
TTTCTTAAGTGGTAACCTAA+GGG - Chr3:89827732-89827751 MsG0380016947.01.T01:intron 30.0%
! AAAAGTGTAGTAATTCGGAA+GGG + Chr3:89832011-89832030 None:intergenic 30.0%
! ACAGGTTGAATCTTTAATTG+TGG + Chr3:89830177-89830196 None:intergenic 30.0%
! ACGCCTTATTAGAAAGAATA+AGG + Chr3:89833132-89833151 None:intergenic 30.0%
! AGATTATTGATTGATACGGT+TGG - Chr3:89831735-89831754 MsG0380016947.01.T01:intron 30.0%
! CTTTTTGCATACATATAGTG+AGG - Chr3:89829869-89829888 MsG0380016947.01.T01:intron 30.0%
! GCTTTGATACAATTTTCCAT+TGG - Chr3:89828289-89828308 MsG0380016947.01.T01:intron 30.0%
! TCAACTTAAAGTTGATCACT+TGG + Chr3:89830936-89830955 None:intergenic 30.0%
! TCAATGAAATTAGCTTGGAT+TGG + Chr3:89833273-89833292 None:intergenic 30.0%
! TCATTGTAGAGTATTCTAAC+TGG - Chr3:89832943-89832962 MsG0380016947.01.T01:intron 30.0%
! TTTGGATTTTTGTCAGTTGT+GGG - Chr3:89828885-89828904 MsG0380016947.01.T01:CDS 30.0%
!! ACTGCTTAACTAATTTTGGT+GGG + Chr3:89831229-89831248 None:intergenic 30.0%
!! ATGGACTGCTTAACTAATTT+TGG + Chr3:89831233-89831252 None:intergenic 30.0%
!! GATTCTGAGATATAGCTAAT+TGG + Chr3:89831664-89831683 None:intergenic 30.0%
!! TGTAATTGATAGTGTCTCTA+TGG + Chr3:89830720-89830739 None:intergenic 30.0%
!! TGTAGAAATCCAGTTTTATC+AGG - Chr3:89829254-89829273 MsG0380016947.01.T01:intron 30.0%
!!! TTCTTTTTCAGAACATAGGA+TGG - Chr3:89831396-89831415 MsG0380016947.01.T01:intron 30.0%
!!! TTGATTGATGTGTTTTTTGG+TGG - Chr3:89831025-89831044 MsG0380016947.01.T01:intron 30.0%
AAAAAGGTTCACCAGTTTAC+TGG + Chr3:89833086-89833105 None:intergenic 35.0%
AAATCAAAATTGGAGGTAGG+CGG - Chr3:89832042-89832061 MsG0380016947.01.T01:intron 35.0%
AACATGCAAACAAACTTGGT+GGG + Chr3:89831353-89831372 None:intergenic 35.0%
ACAACGTGTTGCAATTTGAA+TGG + Chr3:89830889-89830908 None:intergenic 35.0%
ACTGTCATGCAATTATCAAG+AGG - Chr3:89830601-89830620 MsG0380016947.01.T01:intron 35.0%
AGAAGGAGAGATGACATTAA+TGG - Chr3:89832661-89832680 MsG0380016947.01.T01:intron 35.0%
AGGATAGAAACTCAAAGTGT+AGG + Chr3:89830063-89830082 None:intergenic 35.0%
ATAGGCGTGCTTAATATGTA+TGG - Chr3:89830794-89830813 MsG0380016947.01.T01:intron 35.0%
ATCGCACACATTACATGATA+AGG + Chr3:89830083-89830102 None:intergenic 35.0%
ATCTTTGTTCATGGGATTTC+AGG - Chr3:89827110-89827129 MsG0380016947.01.T01:intron 35.0%
ATGGAATACCTGTGCAATTA+AGG + Chr3:89830474-89830493 None:intergenic 35.0%
ATTCAAATGGCAACCAAACT+AGG + Chr3:89828264-89828283 None:intergenic 35.0%
CACCATCAATGAAATTAGCT+TGG + Chr3:89833278-89833297 None:intergenic 35.0%
CAGATATGAATACACACATG+TGG - Chr3:89829410-89829429 MsG0380016947.01.T01:intron 35.0%
CAGTTACGATCTTTGTTCAT+GGG - Chr3:89827102-89827121 MsG0380016947.01.T01:intron 35.0%
CATTTATGACACACACCTAT+AGG - Chr3:89830776-89830795 MsG0380016947.01.T01:intron 35.0%
CCTGTGACACAAAATGTAAT+CGG + Chr3:89827371-89827390 None:intergenic 35.0%
CTATAGGTGTGTGTCATAAA+TGG + Chr3:89830778-89830797 None:intergenic 35.0%
GAAGGAGAGATGACATTAAT+GGG - Chr3:89832662-89832681 MsG0380016947.01.T01:intron 35.0%
GACAACTAATATAGGTGACT+GGG - Chr3:89832167-89832186 MsG0380016947.01.T01:intron 35.0%
GAGTAGGAGTAATAATTGTG+AGG + Chr3:89830137-89830156 None:intergenic 35.0%
GCAATGCAATGAAAAACTGA+AGG - Chr3:89832209-89832228 MsG0380016947.01.T01:intron 35.0%
GCATTAAATCATTCAGCTGT+TGG + Chr3:89830867-89830886 None:intergenic 35.0%
GGAGTACACGTGTTATAATT+TGG + Chr3:89831831-89831850 None:intergenic 35.0%
GTACTTCTTGATCCATAACA+AGG + Chr3:89829573-89829592 None:intergenic 35.0%
GTGTTAGAGTGACTCAAATT+AGG - Chr3:89832842-89832861 MsG0380016947.01.T01:CDS 35.0%
GTTAAATTGCCCAATACTAC+TGG + Chr3:89830549-89830568 None:intergenic 35.0%
GTTGCTTGGTATAATCAGAA+TGG - Chr3:89831621-89831640 MsG0380016947.01.T01:intron 35.0%
GTTTCTTAAGTGGTAACCTA+AGG - Chr3:89827731-89827750 MsG0380016947.01.T01:intron 35.0%
TAACATGCAAACAAACTTGG+TGG + Chr3:89831354-89831373 None:intergenic 35.0%
TAATGTGGACTCTTTGCTAA+GGG - Chr3:89831136-89831155 MsG0380016947.01.T01:intron 35.0%
TACATATTAAGCACGCCTAT+AGG + Chr3:89830794-89830813 None:intergenic 35.0%
TATGAATGGAGAGATCGTTA+GGG - Chr3:89831442-89831461 MsG0380016947.01.T01:intron 35.0%
TCAGTTACGATCTTTGTTCA+TGG - Chr3:89827101-89827120 MsG0380016947.01.T01:intron 35.0%
TCTTCAGTTCGACTTATGAA+TGG - Chr3:89831428-89831447 MsG0380016947.01.T01:intron 35.0%
TGAAATCCTCGCAATAAGAA+AGG - Chr3:89827885-89827904 MsG0380016947.01.T01:intron 35.0%
TTAATGTGGACTCTTTGCTA+AGG - Chr3:89831135-89831154 MsG0380016947.01.T01:intron 35.0%
TTAGAGTGACTCAAATTAGG+TGG - Chr3:89832845-89832864 MsG0380016947.01.T01:CDS 35.0%
TTATGAATGGAGAGATCGTT+AGG - Chr3:89831441-89831460 MsG0380016947.01.T01:intron 35.0%
TTCATGCATAGGTAAAACAG+TGG + Chr3:89828626-89828645 None:intergenic 35.0%
TTCTCTATGTTTGAATGACC+AGG + Chr3:89831707-89831726 None:intergenic 35.0%
TTCTTTCATGCGGACATAAA+AGG + Chr3:89829647-89829666 None:intergenic 35.0%
TTGGCTGCAAATGAGTTTAA+CGG + Chr3:89832345-89832364 None:intergenic 35.0%
! AACAAACTTGGTGGGAAAAA+TGG + Chr3:89831345-89831364 None:intergenic 35.0%
! AGACAAAATTGTGCTTTTCC+TGG - Chr3:89831686-89831705 MsG0380016947.01.T01:intron 35.0%
! CAATACCAAGAGTTTTTGTC+AGG - Chr3:89831096-89831115 MsG0380016947.01.T01:intron 35.0%
! CGATTACATTTTGTGTCACA+GGG - Chr3:89827369-89827388 MsG0380016947.01.T01:CDS 35.0%
! GAAAAGTGTAGTAATTCGGA+AGG + Chr3:89832012-89832031 None:intergenic 35.0%
! GACTGCTTAACTAATTTTGG+TGG + Chr3:89831230-89831249 None:intergenic 35.0%
! GGTTTTACAAAGATAGGGTT+TGG + Chr3:89827327-89827346 None:intergenic 35.0%
! GGTTTTTCTGAACAACTATG+TGG - Chr3:89827432-89827451 MsG0380016947.01.T01:intron 35.0%
! GTAGAGTATTCTAACTGGAA+TGG - Chr3:89832948-89832967 MsG0380016947.01.T01:intron 35.0%
! GTTTGGATTTTTGTCAGTTG+TGG - Chr3:89828884-89828903 MsG0380016947.01.T01:CDS 35.0%
! TCCTATACCTTTTGTATCGA+TGG + Chr3:89830498-89830517 None:intergenic 35.0%
! TTGTATACCGTACGTCTTTT+TGG - Chr3:89827411-89827430 MsG0380016947.01.T01:intron 35.0%
! TTTTCATGGGATTTCAGGAT+TGG - Chr3:89827166-89827185 MsG0380016947.01.T01:intron 35.0%
!! AATTGGCTTAGGGTTTTCAT+GGG - Chr3:89827153-89827172 MsG0380016947.01.T01:intron 35.0%
!! AATTTCATTGATGGTGTTGC+AGG - Chr3:89833282-89833301 MsG0380016947.01.T01:five_prime_UTR 35.0%
!! ATAGCTTGTTTATAGCCTGT+TGG - Chr3:89832466-89832485 MsG0380016947.01.T01:intron 35.0%
!! CTGCTTAACTAATTTTGGTG+GGG + Chr3:89831228-89831247 None:intergenic 35.0%
!! GCACACGATTACTTTTAACA+TGG - Chr3:89829779-89829798 MsG0380016947.01.T01:intron 35.0%
!! GTTATAGTTTTACTGCAGAG+TGG - Chr3:89829338-89829357 MsG0380016947.01.T01:intron 35.0%
!!! ATTTGCTAGTTTTTCCTTCC+AGG - Chr3:89828588-89828607 MsG0380016947.01.T01:intron 35.0%
!!! TGCATTCTTTTGAAACACGA+CGG - Chr3:89827577-89827596 MsG0380016947.01.T01:intron 35.0%
!!! TGTTTTTTGAGTGCCTAGTT+TGG - Chr3:89828248-89828267 MsG0380016947.01.T01:intron 35.0%
AAAGGTAGAGACCTAACAGA+AGG + Chr3:89832108-89832127 None:intergenic 40.0%
AACTAGCAGGAAAATTGAGC+AGG + Chr3:89830014-89830033 None:intergenic 40.0%
AAGCCAATTGTTTCCTCGTT+TGG + Chr3:89828546-89828565 None:intergenic 40.0%
AAGCTATGAACACACCTGAA+TGG + Chr3:89832453-89832472 None:intergenic 40.0%
AAGGAACGAGTCGTAATCAT+TGG + Chr3:89833332-89833351 None:intergenic 40.0%
AATTCGCGTCAACAAACCAT+TGG + Chr3:89827230-89827249 None:intergenic 40.0%
ACCGACAACATTGTGCAAAA+CGG - Chr3:89831482-89831501 MsG0380016947.01.T01:intron 40.0%
ACTGGAAGTAGAATCAAAGG+AGG - Chr3:89832811-89832830 MsG0380016947.01.T01:CDS 40.0%
AGCAACCTGACAAAAACTCT+TGG + Chr3:89831104-89831123 None:intergenic 40.0%
AGTATTCTAACTGGAATGGC+TGG - Chr3:89832952-89832971 MsG0380016947.01.T01:intron 40.0%
AGTCCAAACGAGGAAACAAT+TGG - Chr3:89828540-89828559 MsG0380016947.01.T01:intron 40.0%
AGTTTGTGTCAACAGAAGAG+TGG - Chr3:89832492-89832511 MsG0380016947.01.T01:intron 40.0%
ATGGGAGTAGGATTATAGAC+AGG - Chr3:89832680-89832699 MsG0380016947.01.T01:intron 40.0%
ATGTTCCTGATAGAATGGGT+TGG - Chr3:89832241-89832260 MsG0380016947.01.T01:intron 40.0%
CACTTCACACGAGATTCAAA+CGG - Chr3:89827021-89827040 MsG0380016947.01.T01:CDS 40.0%
CGACAACTAATATAGGTGAC+TGG - Chr3:89832166-89832185 MsG0380016947.01.T01:intron 40.0%
CTCTCATTGACAACAAGACT+TGG + Chr3:89832402-89832421 None:intergenic 40.0%
CTGAACAACTATGTGGACTT+TGG - Chr3:89827439-89827458 MsG0380016947.01.T01:intron 40.0%
CTGGAAGTAGAATCAAAGGA+GGG - Chr3:89832812-89832831 MsG0380016947.01.T01:CDS 40.0%
GACTTTGGCAAGATGTTTAC+CGG - Chr3:89827454-89827473 MsG0380016947.01.T01:intron 40.0%
GAGATGACATTAATGGGAGT+AGG - Chr3:89832668-89832687 MsG0380016947.01.T01:intron 40.0%
GCTAACTGGTGTGATTAATG+TGG - Chr3:89831121-89831140 MsG0380016947.01.T01:intron 40.0%
GCTTTCGGGGTTAAAAAAGA+CGG - Chr3:89832317-89832336 MsG0380016947.01.T01:intron 40.0%
GGCAAGAAGAACAGAAAGAT+TGG + Chr3:89829681-89829700 None:intergenic 40.0%
GGTTCATGGGATTTCAGAAT+TGG - Chr3:89827136-89827155 MsG0380016947.01.T01:intron 40.0%
GGTTGGAGAACATCAAAAAC+AGG + Chr3:89831810-89831829 None:intergenic 40.0%
GTGACTGGAAGTAGAATCAA+AGG - Chr3:89832808-89832827 MsG0380016947.01.T01:CDS 40.0%
GTGCATGGGTATATCGATAA+AGG - Chr3:89831057-89831076 MsG0380016947.01.T01:intron 40.0%
GTTTGTGTCAACAGAAGAGT+GGG - Chr3:89832493-89832512 MsG0380016947.01.T01:intron 40.0%
TCACTATTATACGATGGAGG+AGG + Chr3:89831962-89831981 None:intergenic 40.0%
TCCTCACAATAATCACTCCA+TGG + Chr3:89832560-89832579 None:intergenic 40.0%
TGAATACACACATGTGGACA+TGG - Chr3:89829416-89829435 MsG0380016947.01.T01:intron 40.0%
TGCACTAGATACTCTAGATC+AGG + Chr3:89827994-89828013 None:intergenic 40.0%
TGGTGGGAAAAATGGAAGAT+TGG + Chr3:89831337-89831356 None:intergenic 40.0%
TGTTCATGGGATTTCAGGAT+TGG - Chr3:89827115-89827134 MsG0380016947.01.T01:intron 40.0%
TTATCAGGTGCCTCTTAATG+AGG - Chr3:89829269-89829288 MsG0380016947.01.T01:intron 40.0%
TTCCATGCCATCGATACAAA+AGG - Chr3:89830488-89830507 MsG0380016947.01.T01:intron 40.0%
TTGACACAAACTGAACCAAC+AGG + Chr3:89832484-89832503 None:intergenic 40.0%
! ACCGTTTTGCACAATGTTGT+CGG + Chr3:89831486-89831505 None:intergenic 40.0%
! CCGATTACATTTTGTGTCAC+AGG - Chr3:89827368-89827387 MsG0380016947.01.T01:CDS 40.0%
! GCCATCGATACAAAAGGTAT+AGG - Chr3:89830494-89830513 MsG0380016947.01.T01:intron 40.0%
! GGGATTTCAGAATTGGCTTA+GGG - Chr3:89827143-89827162 MsG0380016947.01.T01:intron 40.0%
! GTTTGTTGAGTGTGAGTTAG+AGG - Chr3:89832752-89832771 MsG0380016947.01.T01:CDS 40.0%
! TAGGGTTTTCATGGGATTTC+AGG - Chr3:89827161-89827180 MsG0380016947.01.T01:intron 40.0%
! TGGGATTTCAGAATTGGCTT+AGG - Chr3:89827142-89827161 MsG0380016947.01.T01:intron 40.0%
! TTAGGGTTTTCATGCTCCAA+TGG - Chr3:89827211-89827230 MsG0380016947.01.T01:intron 40.0%
!! ATCAGATTTTGCGGCATTGA+TGG - Chr3:89828821-89828840 MsG0380016947.01.T01:CDS 40.0%
!! ATGGTTTGTTGACGCGAATT+TGG - Chr3:89827230-89827249 MsG0380016947.01.T01:intron 40.0%
!! CTCTCTAGTCATTTTGAGCT+TGG + Chr3:89827542-89827561 None:intergenic 40.0%
!! GAATTGGCTTAGGGTTTTCA+TGG - Chr3:89827152-89827171 MsG0380016947.01.T01:intron 40.0%
!! GGATTTCAGGATTGGTTCAT+GGG - Chr3:89827123-89827142 MsG0380016947.01.T01:intron 40.0%
!! GTTTTTGTCAGGTTGCTAAC+TGG - Chr3:89831107-89831126 MsG0380016947.01.T01:intron 40.0%
!! TAAGAGGCACCTGATAAAAC+TGG + Chr3:89829266-89829285 None:intergenic 40.0%
!! TACCTTTTGTATCGATGGCA+TGG + Chr3:89830493-89830512 None:intergenic 40.0%
!! TCTAGTCATTTTGAGCTTGG+CGG + Chr3:89827539-89827558 None:intergenic 40.0%
!! TGGTTTGTTGACGCGAATTT+GGG - Chr3:89827231-89827250 MsG0380016947.01.T01:intron 40.0%
AAGCATGGATGTTCCCATTC+CGG + Chr3:89827476-89827495 None:intergenic 45.0%
AAGTGTCTGAACCTGAAGAG+GGG - Chr3:89832708-89832727 MsG0380016947.01.T01:intron 45.0%
ACACAGGTTGCCTCATTAAG+AGG + Chr3:89829282-89829301 None:intergenic 45.0%
ACAGAGGAAGAGACAGAAGT+AGG - Chr3:89832610-89832629 MsG0380016947.01.T01:intron 45.0%
AGCCAATAGCATGTCTTCCT+GGG - Chr3:89832359-89832378 MsG0380016947.01.T01:intron 45.0%
AGGCGTACATGTCCATTGAA+AGG - Chr3:89830649-89830668 MsG0380016947.01.T01:intron 45.0%
AGTTTAGTACCTTTACCCCC+AGG + Chr3:89832379-89832398 None:intergenic 45.0%
ATAATCACTCCATGGCAACC+AGG + Chr3:89832552-89832571 None:intergenic 45.0%
ATTGGTGTGTCTGTATGCGT+AGG + Chr3:89831319-89831338 None:intergenic 45.0%
CAAACGGCGAAAAGAAAACG+CGG - Chr3:89827037-89827056 MsG0380016947.01.T01:intron 45.0%
CAACACTAGTAAGCGAGTCA+TGG + Chr3:89831875-89831894 None:intergenic 45.0%
CATGTTTCCACAATGGTTGC+AGG - Chr3:89827068-89827087 MsG0380016947.01.T01:intron 45.0%
CTGGTAGTACACAGACCATA+GGG - Chr3:89833040-89833059 MsG0380016947.01.T01:intron 45.0%
CTGTCACCTTTCTTATTGCG+AGG + Chr3:89827894-89827913 None:intergenic 45.0%
GAAGTGAGAGCGAAAGAGTA+TGG + Chr3:89827007-89827026 None:intergenic 45.0%
GCCATGGAGTGATTATTGTG+AGG - Chr3:89832556-89832575 MsG0380016947.01.T01:intron 45.0%
GCGAAGTCATGTTTCCACAA+TGG - Chr3:89827061-89827080 MsG0380016947.01.T01:intron 45.0%
GGAACATCCATGCTTCAAGA+TGG - Chr3:89827481-89827500 MsG0380016947.01.T01:intron 45.0%
GGCAAGATGTTTACCGGAAT+GGG - Chr3:89827460-89827479 MsG0380016947.01.T01:intron 45.0%
GGCGTACATGTCCATTGAAA+GGG - Chr3:89830650-89830669 MsG0380016947.01.T01:intron 45.0%
GGGTGATTGTGATGAGTTTC+AGG - Chr3:89832728-89832747 MsG0380016947.01.T01:CDS 45.0%
GGGTGCTTCAATTGTGCTAT+GGG - Chr3:89831911-89831930 MsG0380016947.01.T01:intron 45.0%
GGTAGTACTGTTTCCGAGTT+AGG - Chr3:89827753-89827772 MsG0380016947.01.T01:intron 45.0%
GGTGGGGTCAATGAACAAAA+TGG + Chr3:89831212-89831231 None:intergenic 45.0%
GGTTTGAGAATGGCAAGTGT+GGG - Chr3:89827252-89827271 MsG0380016947.01.T01:intron 45.0%
GTAGAATCAAAGGAGGGATG+AGG - Chr3:89832818-89832837 MsG0380016947.01.T01:CDS 45.0%
GTGCAAAACGGTACTCACAA+CGG - Chr3:89831494-89831513 MsG0380016947.01.T01:intron 45.0%
GTGGAGACAAGTTACGCTTT+CGG - Chr3:89832302-89832321 MsG0380016947.01.T01:intron 45.0%
GTTGCCTATCTCTGCTTCAA+GGG - Chr3:89831891-89831910 MsG0380016947.01.T01:intron 45.0%
GTTTGAGAATGGCAAGTGTG+GGG - Chr3:89827253-89827272 MsG0380016947.01.T01:intron 45.0%
TAATCACTCCATGGCAACCA+GGG + Chr3:89832551-89832570 None:intergenic 45.0%
TCCTTCCAACCCATTCTATC+AGG + Chr3:89832249-89832268 None:intergenic 45.0%
TCGGAAACAGTACTACCCTT+AGG + Chr3:89827750-89827769 None:intergenic 45.0%
TGCAAAACGGTACTCACAAC+GGG - Chr3:89831495-89831514 MsG0380016947.01.T01:intron 45.0%
TGGAGACAAGTTACGCTTTC+GGG - Chr3:89832303-89832322 MsG0380016947.01.T01:intron 45.0%
TGGCAAGATGTTTACCGGAA+TGG - Chr3:89827459-89827478 MsG0380016947.01.T01:intron 45.0%
TGGTAGTACACAGACCATAG+GGG - Chr3:89833041-89833060 MsG0380016947.01.T01:intron 45.0%
TGTTGCCTATCTCTGCTTCA+AGG - Chr3:89831890-89831909 MsG0380016947.01.T01:intron 45.0%
TTAACTCTGCAGTCCAAACG+AGG - Chr3:89828530-89828549 MsG0380016947.01.T01:intron 45.0%
TTGTGAGGATGTATACGGTG+AGG - Chr3:89832571-89832590 MsG0380016947.01.T01:intron 45.0%
! ACATTTTGTGTCACAGGGCA+TGG - Chr3:89827374-89827393 MsG0380016947.01.T01:CDS 45.0%
! AGGGTGCTTCAATTGTGCTA+TGG - Chr3:89831910-89831929 MsG0380016947.01.T01:intron 45.0%
! CAGTGGCGTAAATTTTCTCC+TGG + Chr3:89828609-89828628 None:intergenic 45.0%
! CGCGAATTTGGGTTTGAGAA+TGG - Chr3:89827242-89827261 MsG0380016947.01.T01:intron 45.0%
! GAAGTGTCTGAACCTGAAGA+GGG - Chr3:89832707-89832726 MsG0380016947.01.T01:intron 45.0%
! GGCGTAAATTTTCTCCTGGA+AGG + Chr3:89828605-89828624 None:intergenic 45.0%
! GTAGCTAACCTGAAGAGTAC+CGG + Chr3:89827614-89827633 None:intergenic 45.0%
! TACAATCCCATGTTTTCCCC+TGG - Chr3:89832531-89832550 MsG0380016947.01.T01:intron 45.0%
!! AATGGGTTGGAAGGATCTTG+TGG - Chr3:89832254-89832273 MsG0380016947.01.T01:intron 45.0%
!! AGAAGTGTCTGAACCTGAAG+AGG - Chr3:89832706-89832725 MsG0380016947.01.T01:intron 45.0%
!! GGGATTTCAGGATTGGTTCA+TGG - Chr3:89827122-89827141 MsG0380016947.01.T01:intron 45.0%
!! TCCTGATAGAATGGGTTGGA+AGG - Chr3:89832245-89832264 MsG0380016947.01.T01:intron 45.0%
AAGGTGAGCGGAAGGGTAAT+TGG + Chr3:89832089-89832108 None:intergenic 50.0%
AATCACTCCATGGCAACCAG+GGG + Chr3:89832550-89832569 None:intergenic 50.0%
AGAGATCGTTAGGGTCCCTA+CGG - Chr3:89831451-89831470 MsG0380016947.01.T01:intron 50.0%
AGCACCCTTGAAGCAGAGAT+AGG + Chr3:89831898-89831917 None:intergenic 50.0%
AGGTGAGCGGAAGGGTAATT+GGG + Chr3:89832088-89832107 None:intergenic 50.0%
ATCACCTCCTGCAACCATTG+TGG + Chr3:89827078-89827097 None:intergenic 50.0%
ATGGCAACCAGGGGAAAACA+TGG + Chr3:89832541-89832560 None:intergenic 50.0%
CAGCCAATAGCATGTCTTCC+TGG - Chr3:89832358-89832377 MsG0380016947.01.T01:intron 50.0%
CATCACAATCACCCCTCTTC+AGG + Chr3:89832722-89832741 None:intergenic 50.0%
CCAATAGCATGTCTTCCTGG+GGG - Chr3:89832361-89832380 MsG0380016947.01.T01:intron 50.0%
CCATGCTTCAAGATGGTGCT+GGG - Chr3:89827488-89827507 MsG0380016947.01.T01:intron 50.0%
CCTATGGTCTGTGTACTACC+AGG + Chr3:89833042-89833061 None:intergenic 50.0%
CCTGGTAGTACACAGACCAT+AGG - Chr3:89833039-89833058 MsG0380016947.01.T01:intron 50.0%
CGAAGTTTCCGGTACTCTTC+AGG - Chr3:89827603-89827622 MsG0380016947.01.T01:intron 50.0%
CGACTCGTTCCTTACCATGA+AGG - Chr3:89833339-89833358 MsG0380016947.01.T01:five_prime_UTR 50.0%
CTAACAGAAGGTGAGCGGAA+GGG + Chr3:89832096-89832115 None:intergenic 50.0%
GAACACACCTGAATGGCTAC+AGG + Chr3:89832446-89832465 None:intergenic 50.0%
GAGACCTAACAGAAGGTGAG+CGG + Chr3:89832101-89832120 None:intergenic 50.0%
GCCAATAGCATGTCTTCCTG+GGG - Chr3:89832360-89832379 MsG0380016947.01.T01:intron 50.0%
GGAGACAAGTTACGCTTTCG+GGG - Chr3:89832304-89832323 MsG0380016947.01.T01:intron 50.0%
GGGTTTGAGAATGGCAAGTG+TGG - Chr3:89827251-89827270 MsG0380016947.01.T01:intron 50.0%
GGTGAAGAGTGAGACCTGAT+AGG - Chr3:89832773-89832792 MsG0380016947.01.T01:CDS 50.0%
GTTTCCACAATGGTTGCAGG+AGG - Chr3:89827071-89827090 MsG0380016947.01.T01:intron 50.0%
TCCATGCTTCAAGATGGTGC+TGG - Chr3:89827487-89827506 MsG0380016947.01.T01:intron 50.0%
TGAGGATGTATACGGTGAGG+AGG - Chr3:89832574-89832593 MsG0380016947.01.T01:intron 50.0%
TGCATAGCCTGTAGCCATTC+AGG - Chr3:89832436-89832455 MsG0380016947.01.T01:intron 50.0%
TGGCAACCAGGGGAAAACAT+GGG + Chr3:89832540-89832559 None:intergenic 50.0%
TTCTCCTTCTGCCTCAACTC+AGG + Chr3:89832645-89832664 None:intergenic 50.0%
! ATGTTTTCCCCTGGTTGCCA+TGG - Chr3:89832540-89832559 MsG0380016947.01.T01:intron 50.0%
! TGAGTTGAGGCAGAAGGAGA+AGG - Chr3:89832644-89832663 MsG0380016947.01.T01:intron 50.0%
AACTGGAATGGCTGGCGTGT+TGG - Chr3:89832960-89832979 MsG0380016947.01.T01:intron 55.0%
ATACGGTGAGGAGGAGGTTG+AGG - Chr3:89832583-89832602 MsG0380016947.01.T01:intron 55.0%
CACGACGGAGTCGAAGTTTC+CGG - Chr3:89827592-89827611 MsG0380016947.01.T01:intron 55.0%
CCCAGCACCATCTTGAAGCA+TGG + Chr3:89827491-89827510 None:intergenic 55.0%
CCCCCAGGAAGACATGCTAT+TGG + Chr3:89832364-89832383 None:intergenic 55.0%
CCTAACAGAAGGTGAGCGGA+AGG + Chr3:89832097-89832116 None:intergenic 55.0%
CCTTCCGCTCACCTTCTGTT+AGG - Chr3:89832094-89832113 MsG0380016947.01.T01:intron 55.0%
GCATGTCTTCCTGGGGGTAA+AGG - Chr3:89832367-89832386 MsG0380016947.01.T01:intron 55.0%
GGAGACTGTAGCCTGAGTTG+AGG - Chr3:89832631-89832650 MsG0380016947.01.T01:intron 55.0%
GGATGTATACGGTGAGGAGG+AGG - Chr3:89832577-89832596 MsG0380016947.01.T01:intron 55.0%
GGTCTGTGTACTACCAGGAG+CGG + Chr3:89833037-89833056 None:intergenic 55.0%
GGTGGCTCAAGCATGTGCAT+GGG - Chr3:89831043-89831062 MsG0380016947.01.T01:intron 55.0%
GTTCACTTTGATGCCGCTCC+TGG - Chr3:89833021-89833040 MsG0380016947.01.T01:intron 55.0%
TGGTGGCTCAAGCATGTGCA+TGG - Chr3:89831042-89831061 MsG0380016947.01.T01:intron 55.0%
TGTCGGTGAGCTTGTCCGTA+GGG + Chr3:89831469-89831488 None:intergenic 55.0%
TGTGTCACAGGGCATGGCTT+TGG - Chr3:89827380-89827399 MsG0380016947.01.T01:intron 55.0%
TTGTCGGTGAGCTTGTCCGT+AGG + Chr3:89831470-89831489 None:intergenic 55.0%
! GTAGCCTGAGTTGAGGCAGA+AGG - Chr3:89832638-89832657 MsG0380016947.01.T01:intron 55.0%
AGGAGGTTGAGGAGGGACAG+AGG - Chr3:89832594-89832613 MsG0380016947.01.T01:intron 60.0%
GGTGAGGAGGAGGTTGAGGA+GGG - Chr3:89832587-89832606 MsG0380016947.01.T01:intron 60.0%
!! GTCACAGGGCATGGCTTTGG+TGG - Chr3:89827383-89827402 MsG0380016947.01.T01:intron 60.0%
CGGTGAGGAGGAGGTTGAGG+AGG - Chr3:89832586-89832605 MsG0380016947.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 89826981 89833369 89826981 ID=MsG0380016947.01;Name=MsG0380016947.01
Chr3 mRNA 89826981 89833369 89826981 ID=MsG0380016947.01.T01;Parent=MsG0380016947.01;Name=MsG0380016947.01.T01;_AED=0.50;_eAED=0.50;_QI=88|1|0.8|1|1|1|5|0|259
Chr3 exon 89826981 89827046 89826981 ID=MsG0380016947.01.T01:exon:15572;Parent=MsG0380016947.01.T01
Chr3 exon 89827288 89827398 89827288 ID=MsG0380016947.01.T01:exon:15571;Parent=MsG0380016947.01.T01
Chr3 exon 89828782 89828943 89828782 ID=MsG0380016947.01.T01:exon:15570;Parent=MsG0380016947.01.T01
Chr3 exon 89832726 89832960 89832726 ID=MsG0380016947.01.T01:exon:15569;Parent=MsG0380016947.01.T01
Chr3 exon 89833076 89833369 89833076 ID=MsG0380016947.01.T01:exon:15568;Parent=MsG0380016947.01.T01
Chr3 five_prime_UTR 89833282 89833369 89833282 ID=MsG0380016947.01.T01:five_prime_utr;Parent=MsG0380016947.01.T01
Chr3 CDS 89833076 89833281 89833076 ID=MsG0380016947.01.T01:cds;Parent=MsG0380016947.01.T01
Chr3 CDS 89832726 89832960 89832726 ID=MsG0380016947.01.T01:cds;Parent=MsG0380016947.01.T01
Chr3 CDS 89828782 89828943 89828782 ID=MsG0380016947.01.T01:cds;Parent=MsG0380016947.01.T01
Chr3 CDS 89827288 89827398 89827288 ID=MsG0380016947.01.T01:cds;Parent=MsG0380016947.01.T01
Chr3 CDS 89826981 89827046 89826981 ID=MsG0380016947.01.T01:cds;Parent=MsG0380016947.01.T01
Gene Sequence

>MsG0380016947.01.T01

ATGTTTCCACAATGGTTGCAGGAGGTGATTCGTCAGTTACGATCTTTGTTCATGGGATTTCAGGATTGGTTCATGGGATTTCAGAATTGGCTTAGGGTTTTCATGGGATTTCAGGATTGGTTCATGGGATTTCAGAATTGGCTTAGGGTTTTCATGCTCCAATGGTTTGTTGACGCGAATTTGGGTTTGAGAATGGCAAGTGTGGGGGCATGGCTTTGGTGGTTGATTTGTATACCGTACGTCTTTTTGGTTTTTCTGAACAACTATGTGGACTTTGGCAAGATGTTTACCGGAATGGGAACATCCATGCTTCAAGATGGTGCTGGGAAGTTATTTGCTAACTTTTACTCAGCCGCCAAGCTCAAAATGACTAGAGAGTACGCACCGAATCAATGCATTCTTTTGAAACACGACGGAGTCGAAGTTTCCGGTACTCTTCAGAACATAGGATGGTTCTCATCATCTTCAGTTCGACTTATGAATGGAGAGATCGTTAGGGTCCCTACGGACAAGCTCACCGACAACATTGTGCAAAACGGTACTCACAACGGGCATATGAATCTTTACATTCCAGTTGAGAAACTGAATATTGACAAACTGAAGAGTATTCTAACTGGAATGGCTGGCGTGTTGGCTCAAAGCTCTCATGTGTTGCAAGACAAACATAGAAGAGTTCACTTTGATGCCGCTCCTGGTAGTACACAGACCATAGGGGTACTGATTGACTGCTATCTCAATACCAATGATTACGACTCGTTCCTTACCATGAAGGTAAAATAG
Protein sequence

>MsG0380016947.01.T01

MFPQWLQEVIRQLRSLFMGFQDWFMGFQNWLRVFMGFQDWFMGFQNWLRVFMLQWFVDANLGLRMASVGAWLWWLICIPYVFLVFLNNYVDFGKMFTGMGTSMLQDGAGKLFANFYSAAKLKMTREYAPNQCILLKHDGVEVSGTLQNIGWFSSSSVRLMNGEIVRVPTDKLTDNIVQNGTHNGHMNLYIPVEKLNIDKLKSILTGMAGVLAQSSHVLQDKHRRVHFDAAPGSTQTIGVLIDCYLNTNDYDSFLTMKVK*