AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017376.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017376.01.T01 MTR_3g106220 98.232 622 11 0 1 622 1 622 0.0 1266
MsG0380017376.01.T01 MTR_1g013170 48.048 589 195 17 6 577 3 497 1.07e-149 442
MsG0380017376.01.T01 MTR_2g450070 39.559 680 320 17 6 623 16 666 4.70e-129 395
MsG0380017376.01.T01 MTR_2g450070 46.707 501 222 9 6 483 16 494 1.58e-128 394
MsG0380017376.01.T01 MTR_1g013180 54.524 431 150 13 6 413 154 561 2.52e-127 391
MsG0380017376.01.T01 MTR_7g117705 59.184 343 102 6 6 338 3 317 3.87e-117 357
MsG0380017376.01.T01 MTR_2g034960 48.747 359 149 7 6 357 27 357 4.78e-100 318
MsG0380017376.01.T01 MTR_1g032570 55.290 293 119 3 4 286 7 297 8.51e-98 313
MsG0380017376.01.T01 MTR_4g121020 56.934 274 86 3 3 263 26 280 4.19e-97 312
MsG0380017376.01.T01 MTR_4g121020 57.565 271 83 3 6 263 29 280 4.49e-97 312
MsG0380017376.01.T01 MTR_4g131580 43.964 439 216 9 2 429 11 430 9.50e-96 307
MsG0380017376.01.T01 MTR_4g131600 49.701 334 147 5 5 330 17 337 4.94e-92 296
MsG0380017376.01.T01 MTR_4g131570 50.760 329 146 4 8 328 17 337 1.09e-91 296
MsG0380017376.01.T01 MTR_3g086100 53.289 304 115 5 8 310 13 290 4.83e-91 293
MsG0380017376.01.T01 MTR_3g102590 61.011 277 48 5 1 273 1 221 1.33e-90 281
MsG0380017376.01.T01 MTR_8g079940 56.343 268 95 4 6 265 23 276 7.17e-89 286
MsG0380017376.01.T01 MTR_3g102590 59.677 248 43 3 1 247 1 192 2.54e-78 247
MsG0380017376.01.T01 MTR_1g032570 55.217 230 91 3 67 286 1 228 2.58e-71 241
MsG0380017376.01.T01 MTR_3g102600 83.459 133 22 0 1 133 1 133 4.48e-69 223
MsG0380017376.01.T01 MTR_3g102600 73.585 53 14 0 197 249 131 183 1.73e-20 90.1
MsG0380017376.01.T01 MTR_3g102600 83.459 133 22 0 1 133 1 133 9.67e-68 221
MsG0380017376.01.T01 MTR_3g102600 60.000 115 22 1 197 311 131 221 1.09e-38 142
MsG0380017376.01.T01 MTR_3g086100 51.837 245 91 5 67 310 1 219 8.47e-64 219
MsG0380017376.01.T01 MTR_4g021760 41.700 247 112 4 8 254 11 225 8.71e-52 181
MsG0380017376.01.T01 MTR_1g013160 63.399 153 50 2 70 221 1 148 9.80e-51 173
MsG0380017376.01.T01 MTR_4g121020 50.000 190 63 3 87 263 6 176 1.12e-48 179
MsG0380017376.01.T01 MTR_4g021790 39.516 248 118 3 8 255 10 225 2.03e-47 168
MsG0380017376.01.T01 MTR_4g021845 38.750 240 115 3 8 247 10 217 9.82e-46 162
MsG0380017376.01.T01 MTR_4g021855 38.306 248 121 4 8 255 10 225 1.15e-45 164
MsG0380017376.01.T01 MTR_3g102600 82.143 84 15 0 50 133 1 84 1.47e-42 150
MsG0380017376.01.T01 MTR_3g102600 73.585 53 14 0 197 249 82 134 2.52e-21 90.9
MsG0380017376.01.T01 MTR_0450s0040 36.179 246 130 3 12 256 8 227 3.47e-42 156
MsG0380017376.01.T01 MTR_3g102600 82.143 84 15 0 50 133 1 84 2.70e-41 148
MsG0380017376.01.T01 MTR_3g102600 60.000 115 22 1 197 311 82 172 5.66e-39 142
MsG0380017376.01.T01 MTR_8g105600 36.630 273 159 5 5 276 6 265 1.88e-39 153
MsG0380017376.01.T01 MTR_6g045327 36.078 255 129 5 1 254 7 228 4.18e-38 145
MsG0380017376.01.T01 MTR_7g026400 36.771 223 121 3 35 257 14 216 6.64e-36 143
MsG0380017376.01.T01 MTR_5g055260 34.274 248 104 8 8 255 10 198 5.01e-30 119
MsG0380017376.01.T01 MTR_8g032710 29.297 256 161 6 11 250 20 271 2.34e-25 110
MsG0380017376.01.T01 MTR_3g092780 31.677 161 98 3 12 161 56 215 6.55e-23 103
MsG0380017376.01.T01 MTR_3g092780 31.677 161 98 3 12 161 56 215 7.91e-23 103
MsG0380017376.01.T01 MTR_3g092780 37.097 124 73 2 12 131 56 178 1.63e-22 102
MsG0380017376.01.T01 MTR_3g092780 37.097 124 73 2 12 131 56 178 2.14e-22 102
MsG0380017376.01.T01 MTR_4g064730 46.667 105 53 1 164 265 94 198 4.75e-22 97.8
MsG0380017376.01.T01 MTR_4g023980 32.934 167 81 3 58 224 39 174 1.03e-21 93.2
MsG0380017376.01.T01 MTR_6g016850 33.125 160 100 4 5 162 6 160 2.13e-21 92.0
MsG0380017376.01.T01 MTR_7g118260 35.915 142 80 3 1 134 1 139 3.08e-21 98.2
MsG0380017376.01.T01 MTR_7g118260 32.039 206 115 5 1 198 1 189 3.28e-21 98.6
MsG0380017376.01.T01 MTR_8g093040 36.923 130 82 0 1 130 7 136 3.45e-21 94.4
MsG0380017376.01.T01 MTR_1g067110 37.705 122 73 2 12 130 85 206 3.50e-21 98.6
MsG0380017376.01.T01 MTR_1g067110 37.705 122 73 2 12 130 85 206 3.65e-21 98.6
MsG0380017376.01.T01 MTR_4g061360 39.344 122 71 1 12 130 89 210 3.76e-21 99.0
MsG0380017376.01.T01 MTR_7g089010 56.000 75 32 1 186 259 78 152 7.81e-21 94.0
MsG0380017376.01.T01 MTR_8g024260 34.868 152 88 2 14 162 38 181 1.74e-20 96.3
MsG0380017376.01.T01 MTR_6g453220 66.667 75 24 1 214 287 379 453 2.25e-20 95.5
MsG0380017376.01.T01 MTR_3g037390 34.677 124 78 1 12 132 24 147 2.48e-19 92.4
MsG0380017376.01.T01 MTR_4g108880 33.582 134 84 2 4 132 23 156 9.61e-18 87.4
MsG0380017376.01.T01 MTR_2g090675 45.455 88 48 0 178 265 141 228 1.01e-17 86.7
MsG0380017376.01.T01 MTR_4g078810 50.685 73 36 0 193 265 153 225 1.07e-17 86.3
MsG0380017376.01.T01 MTR_5g014040 56.061 66 29 0 191 256 304 369 1.23e-17 87.0
MsG0380017376.01.T01 MTR_5g014040 37.097 124 74 2 8 130 14 134 2.27e-13 73.6
MsG0380017376.01.T01 MTR_4g098870 60.656 61 24 0 196 256 308 368 4.01e-17 85.5
MsG0380017376.01.T01 MTR_4g098870 33.065 124 79 2 8 130 14 134 7.00e-12 68.9
MsG0380017376.01.T01 MTR_4g098870 60.656 61 24 0 196 256 328 388 4.35e-17 85.5
MsG0380017376.01.T01 MTR_4g098870 33.065 124 79 2 8 130 34 154 8.46e-12 68.6
MsG0380017376.01.T01 MTR_4g098870 60.656 61 24 0 196 256 308 368 4.60e-17 85.1
MsG0380017376.01.T01 MTR_4g098870 33.065 124 79 2 8 130 14 134 1.50e-11 67.8
MsG0380017376.01.T01 MTR_4g098870 60.656 61 24 0 196 256 328 388 4.98e-17 85.1
MsG0380017376.01.T01 MTR_4g098870 33.065 124 79 2 8 130 34 154 1.80e-11 67.4
MsG0380017376.01.T01 MTR_4g098870 60.656 61 24 0 196 256 347 407 5.24e-17 85.1
MsG0380017376.01.T01 MTR_4g098870 33.065 124 79 2 8 130 53 173 1.15e-11 68.2
MsG0380017376.01.T01 MTR_3g084390 48.101 79 31 2 1 69 1 79 9.05e-16 73.2
MsG0380017376.01.T01 MTR_5g014040 52.113 71 29 1 191 256 264 334 1.05e-15 80.9
MsG0380017376.01.T01 MTR_5g014040 52.113 71 29 1 191 256 304 374 1.21e-15 80.9
MsG0380017376.01.T01 MTR_5g014040 37.097 124 74 2 8 130 14 134 2.57e-13 73.2
MsG0380017376.01.T01 MTR_5g017980 39.516 124 64 4 197 318 191 305 6.13e-15 76.6
MsG0380017376.01.T01 MTR_5g017980 39.516 124 64 4 197 318 192 306 6.14e-15 76.6
MsG0380017376.01.T01 MTR_4g086835 38.679 106 50 2 197 298 273 367 4.82e-14 75.1
MsG0380017376.01.T01 MTR_5g017980 39.200 125 64 5 197 318 192 307 6.98e-14 73.6
MsG0380017376.01.T01 MTR_1g093080 45.679 81 42 2 191 269 204 284 1.38e-13 73.2
MsG0380017376.01.T01 MTR_7g115530 62.500 56 20 1 196 250 216 271 1.47e-13 72.4
MsG0380017376.01.T01 MTR_6g088950 25.843 178 123 2 10 178 5 182 1.82e-13 70.5
MsG0380017376.01.T01 MTR_7g115530 62.500 56 20 1 196 250 216 271 2.35e-13 72.0
MsG0380017376.01.T01 MTR_7g115530 62.500 56 20 1 196 250 216 271 3.13e-13 72.0
MsG0380017376.01.T01 MTR_7g115530 62.500 56 20 1 196 250 216 271 5.12e-13 72.0
MsG0380017376.01.T01 MTR_1g080330 56.897 58 24 1 194 250 171 228 8.65e-13 69.7
MsG0380017376.01.T01 MTR_5g054300 40.230 87 50 2 185 270 186 271 1.30e-12 70.1
MsG0380017376.01.T01 MTR_1g080330 56.897 58 24 1 194 250 171 228 1.39e-12 70.1
MsG0380017376.01.T01 MTR_4g086835 38.318 107 50 3 197 298 273 368 1.49e-12 70.5
MsG0380017376.01.T01 MTR_5g041350 36.842 95 57 2 194 285 11 105 2.04e-11 66.2
MsG0380017376.01.T01 MTR_4g113140 48.387 62 31 1 197 257 234 295 4.70e-11 65.9
MsG0380017376.01.T01 MTR_6g032990 49.153 59 29 1 194 251 38 96 9.88e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017376.01.T01 AT2G25180 52.523 436 156 13 6 419 11 417 2.70e-127 389
MsG0380017376.01.T01 AT4G31920 52.846 369 110 9 6 355 11 334 1.75e-108 338
MsG0380017376.01.T01 AT3G16857 55.674 282 93 5 8 266 33 305 1.19e-94 306
MsG0380017376.01.T01 AT3G16857 55.674 282 93 5 8 266 33 305 2.31e-94 305
MsG0380017376.01.T01 AT5G58080 49.319 367 145 9 2 349 8 352 4.25e-92 298
MsG0380017376.01.T01 AT2G01760 56.538 260 110 3 6 262 5 264 6.08e-86 274
MsG0380017376.01.T01 AT1G67710 57.769 251 97 4 9 256 8 252 7.74e-82 268
MsG0380017376.01.T01 AT2G01760 51.042 288 110 4 6 262 5 292 5.56e-80 259
MsG0380017376.01.T01 AT3G16857 54.733 243 78 5 47 266 2 235 3.96e-75 253
MsG0380017376.01.T01 AT2G01760 54.774 199 87 3 67 262 1 199 2.38e-56 194
MsG0380017376.01.T01 AT1G67710 57.513 193 73 4 67 256 1 187 4.40e-55 194
MsG0380017376.01.T01 AT5G49240 39.167 240 141 2 8 247 38 272 1.76e-51 180
MsG0380017376.01.T01 AT3G62670 37.091 275 144 6 2 267 31 285 4.80e-42 158
MsG0380017376.01.T01 AT1G67710 52.601 173 73 4 87 256 12 178 6.42e-41 155
MsG0380017376.01.T01 AT1G49190 35.547 256 150 5 7 255 29 276 8.25e-40 151
MsG0380017376.01.T01 AT5G07210 29.683 347 197 10 10 328 14 341 1.94e-34 139
MsG0380017376.01.T01 AT5G07210 29.014 355 197 11 10 328 14 349 6.14e-32 131
MsG0380017376.01.T01 AT2G27070 30.576 278 154 8 10 256 14 283 3.91e-28 119
MsG0380017376.01.T01 AT2G46790 36.082 194 99 6 12 185 37 225 2.91e-25 109
MsG0380017376.01.T01 AT2G46790 36.082 194 99 6 12 185 37 225 3.34e-25 109
MsG0380017376.01.T01 AT1G49190 39.200 125 76 0 7 131 29 153 4.53e-25 110
MsG0380017376.01.T01 AT5G24470 35.294 170 94 5 6 168 42 202 2.09e-23 105
MsG0380017376.01.T01 AT5G59570 55.172 87 36 2 180 263 120 206 4.47e-23 100
MsG0380017376.01.T01 AT5G59570 55.172 87 36 2 180 263 120 206 4.47e-23 100
MsG0380017376.01.T01 AT3G46640 53.086 81 38 0 182 262 128 208 1.23e-22 99.8
MsG0380017376.01.T01 AT3G46640 53.086 81 38 0 182 262 128 208 1.23e-22 99.8
MsG0380017376.01.T01 AT3G46640 53.086 81 38 0 182 262 128 208 1.61e-22 99.4
MsG0380017376.01.T01 AT1G68210 26.937 271 171 4 12 257 13 281 6.84e-22 101
MsG0380017376.01.T01 AT5G60100 37.795 127 75 2 8 130 59 185 1.95e-21 97.8
MsG0380017376.01.T01 AT5G60100 37.795 127 75 2 8 130 59 185 1.95e-21 97.8
MsG0380017376.01.T01 AT5G60100 37.795 127 75 2 8 130 59 185 1.95e-21 97.8
MsG0380017376.01.T01 AT5G60100 37.795 127 75 2 8 130 59 185 3.01e-21 98.2
MsG0380017376.01.T01 AT5G60100 37.795 127 75 2 8 130 59 185 3.01e-21 98.2
MsG0380017376.01.T01 AT5G60100 37.795 127 75 2 8 130 59 185 3.01e-21 98.2
MsG0380017376.01.T01 AT5G60100 37.795 127 75 2 8 130 59 185 6.25e-21 97.1
MsG0380017376.01.T01 AT2G40970 65.000 60 21 0 197 256 104 163 9.96e-21 92.4
MsG0380017376.01.T01 AT3G10760 65.000 60 21 0 197 256 104 163 1.38e-20 94.0
MsG0380017376.01.T01 AT5G05090 65.000 60 21 0 197 256 80 139 1.40e-20 92.4
MsG0380017376.01.T01 AT5G02810 38.525 122 72 1 12 130 78 199 2.30e-20 96.3
MsG0380017376.01.T01 AT5G44190 59.155 71 29 0 196 266 145 215 3.89e-20 92.8
MsG0380017376.01.T01 AT5G44190 59.155 71 29 0 196 266 145 215 4.94e-20 93.2
MsG0380017376.01.T01 AT5G61380 34.677 124 78 1 12 132 19 142 7.20e-19 91.3
MsG0380017376.01.T01 AT2G20570 43.878 98 51 1 159 256 118 211 2.28e-17 85.5
MsG0380017376.01.T01 AT4G18020 41.748 103 53 1 161 256 252 354 2.94e-16 82.4
MsG0380017376.01.T01 AT4G18020 34.559 136 80 3 6 134 12 145 3.61e-13 72.8
MsG0380017376.01.T01 AT4G18020 41.748 103 53 1 161 256 252 354 2.94e-16 82.4
MsG0380017376.01.T01 AT4G18020 34.559 136 80 3 6 134 12 145 3.61e-13 72.8
MsG0380017376.01.T01 AT4G18020 41.748 103 53 1 161 256 252 354 2.94e-16 82.4
MsG0380017376.01.T01 AT4G18020 34.559 136 80 3 6 134 12 145 3.61e-13 72.8
MsG0380017376.01.T01 AT4G18020 41.748 103 53 1 161 256 252 354 2.94e-16 82.4
MsG0380017376.01.T01 AT4G18020 34.559 136 80 3 6 134 12 145 3.61e-13 72.8
MsG0380017376.01.T01 AT4G18020 41.748 103 53 1 161 256 252 354 2.94e-16 82.4
MsG0380017376.01.T01 AT4G18020 34.559 136 80 3 6 134 12 145 3.61e-13 72.8
MsG0380017376.01.T01 AT4G18020 41.748 103 53 1 161 256 252 354 2.94e-16 82.4
MsG0380017376.01.T01 AT4G18020 34.559 136 80 3 6 134 12 145 3.61e-13 72.8
MsG0380017376.01.T01 AT4G18020 41.748 103 53 1 161 256 252 354 3.35e-16 82.4
MsG0380017376.01.T01 AT4G18020 34.559 136 80 3 6 134 12 145 5.12e-13 72.4
MsG0380017376.01.T01 AT4G18020 41.748 103 53 1 161 256 252 354 3.35e-16 82.4
MsG0380017376.01.T01 AT4G18020 34.559 136 80 3 6 134 12 145 5.12e-13 72.4
MsG0380017376.01.T01 AT4G18020 41.748 103 53 1 161 256 252 354 3.35e-16 82.4
MsG0380017376.01.T01 AT4G18020 34.559 136 80 3 6 134 12 145 5.12e-13 72.4
MsG0380017376.01.T01 AT4G18020 41.748 103 53 1 161 256 252 354 3.35e-16 82.4
MsG0380017376.01.T01 AT4G18020 34.559 136 80 3 6 134 12 145 5.12e-13 72.4
MsG0380017376.01.T01 AT4G18020 41.748 103 53 1 161 256 252 354 3.35e-16 82.4
MsG0380017376.01.T01 AT4G18020 34.559 136 80 3 6 134 12 145 5.12e-13 72.4
MsG0380017376.01.T01 AT2G20570 61.404 57 22 0 200 256 171 227 5.84e-16 81.3
MsG0380017376.01.T01 AT1G68670 31.818 154 90 4 181 333 198 337 6.88e-13 70.9
MsG0380017376.01.T01 AT4G13640 42.708 96 39 3 198 282 37 127 2.96e-12 68.2
MsG0380017376.01.T01 AT4G13640 42.708 96 39 3 198 282 37 127 3.03e-12 68.2
MsG0380017376.01.T01 AT1G49560 38.182 110 61 3 195 298 189 297 7.11e-12 67.8
MsG0380017376.01.T01 AT3G24120 42.105 95 39 3 198 281 41 130 1.17e-11 66.6
MsG0380017376.01.T01 AT3G24120 42.105 95 39 3 198 281 41 130 1.26e-11 66.6
MsG0380017376.01.T01 AT1G25550 51.667 60 28 1 197 255 208 267 1.36e-11 67.0
MsG0380017376.01.T01 AT2G03500 46.875 64 33 1 195 257 230 293 3.32e-11 66.2
MsG0380017376.01.T01 AT3G04030 50.847 59 28 1 194 251 41 99 3.58e-11 65.9
MsG0380017376.01.T01 AT3G04030 50.847 59 28 1 194 251 41 99 3.92e-11 65.9
MsG0380017376.01.T01 AT4G37180 49.180 61 30 1 196 255 208 268 4.04e-11 65.5
MsG0380017376.01.T01 AT4G37180 49.180 61 30 1 196 255 215 275 4.95e-11 65.5
MsG0380017376.01.T01 AT1G10470 32.061 131 77 2 14 132 22 152 7.61e-11 63.5
MsG0380017376.01.T01 AT1G10470 32.061 131 77 2 14 132 36 166 9.17e-11 63.2
MsG0380017376.01.T01 AT4G00760 27.670 206 121 8 30 215 1 198 9.45e-11 64.3

Find 164 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGATCCGGGAATTTATT+TGG 0.160454 3:+95537673 None:intergenic
AAGCCATACAGAAGCATTTA+TGG 0.191931 3:+95536925 None:intergenic
TCCAACTTGTCTCATGGTTT+TGG 0.250920 3:-95540317 MsG0380017376.01.T01:CDS
TCAAGCGACGTGCCGTTATC+TGG 0.269805 3:-95537454 MsG0380017376.01.T01:CDS
ACATTTGGCAGCATGTAATT+AGG 0.295640 3:-95538822 MsG0380017376.01.T01:CDS
TCCAGCATGCTTCATTTGTA+TGG 0.304531 3:+95537102 None:intergenic
ATTCCTTGGGAGTGCATATC+TGG 0.307526 3:+95537319 None:intergenic
TATTTGAGAATGGGTGGTTC+TGG 0.310707 3:-95537997 MsG0380017376.01.T01:CDS
TTGAAGAGAAAGAATTTGTT+TGG 0.311046 3:+95537428 None:intergenic
CGTTAATCAGAATATTCTTC+AGG 0.324708 3:-95537794 MsG0380017376.01.T01:CDS
TGAACTTGTGGGACTTGAAA+TGG 0.326717 3:-95539094 MsG0380017376.01.T01:CDS
GCTAGTATGGTGGCAGCCTT+AGG 0.331673 3:-95538036 MsG0380017376.01.T01:CDS
GCAGAAAATTCAGATGAAAA+TGG 0.333558 3:-95538709 MsG0380017376.01.T01:CDS
GTTGATCCGGGAATTTATTT+GGG 0.335841 3:+95537674 None:intergenic
TCCCATCCCAAATAAATTCC+CGG 0.335864 3:-95537680 MsG0380017376.01.T01:CDS
TGGTAACGAGGGAAATGAAA+TGG 0.336379 3:+95540499 None:intergenic
CCCTTGCAAGCGGGGTATCC+TGG 0.337535 3:-95537352 MsG0380017376.01.T01:CDS
AATTGTTTAAATTACGTGAT+TGG 0.348210 3:+95537857 None:intergenic
GCAAAACTTGGCCGTTGATC+CGG 0.363698 3:+95537661 None:intergenic
AACTCTCTTGCTCCAGTTAA+CGG 0.366243 3:-95537187 MsG0380017376.01.T01:CDS
AGAAGAAGCCTCGGGTTGTT+TGG 0.367984 3:-95538600 MsG0380017376.01.T01:CDS
TAGAGGAGCTAAAGAACATT+TGG 0.372140 3:-95538837 MsG0380017376.01.T01:CDS
CTGGAATTTAAGTTGATCAT+TGG 0.373200 3:+95537831 None:intergenic
TCCTTCGGGGCTTCTTCAGT+TGG 0.386130 3:-95537881 MsG0380017376.01.T01:CDS
CTGAAGAATATTCTGATTAA+CGG 0.389124 3:+95537795 None:intergenic
TCTTGGTTCACTGGAATACT+TGG 0.389557 3:-95537002 MsG0380017376.01.T01:CDS
AACGGTAATTTGCCATTTCA+AGG 0.393348 3:-95537268 MsG0380017376.01.T01:CDS
CTGCCACCATACTAGCTTGT+TGG 0.395940 3:+95538043 None:intergenic
CGGTCTTCCCATCCTTGAAA+TGG 0.402240 3:+95537256 None:intergenic
GAAAGAAAACACGGAGGTAT+AGG 0.402851 3:-95537571 MsG0380017376.01.T01:CDS
GCTGAAACCTGTGAGATTAG+AGG 0.402851 3:-95538854 MsG0380017376.01.T01:CDS
TTCTAATAATCTTGGTTCAC+TGG 0.404941 3:-95537011 MsG0380017376.01.T01:CDS
TTCCCATAAATGCTTCTGTA+TGG 0.410255 3:-95536928 MsG0380017376.01.T01:CDS
ATTCTGATTAACGGGAGTTA+TGG 0.410279 3:+95537804 None:intergenic
CCTTCGGGGCTTCTTCAGTT+GGG 0.414763 3:-95537880 MsG0380017376.01.T01:CDS
ATTTCAGTGTTGTCTGCATA+TGG 0.417968 3:-95538928 MsG0380017376.01.T01:intron
GGTAACGAGGGAAATGAAAT+GGG 0.423435 3:+95540500 None:intergenic
CACGCATTCCGATGGGAAAA+CGG 0.428750 3:+95540359 None:intergenic
AAGGTAGGCACGGTGATAAT+TGG 0.437512 3:-95537477 MsG0380017376.01.T01:CDS
CGAGGCTTCTTCTGAGCTGA+TGG 0.438400 3:+95538610 None:intergenic
AAACACGGAGGTATAGGAAT+AGG 0.439930 3:-95537565 MsG0380017376.01.T01:CDS
TGCAAACCAACAAGCTAGTA+TGG 0.442595 3:-95538049 MsG0380017376.01.T01:CDS
AGGTGGAGCTAGTTGTTGTC+TGG 0.446742 3:+95537146 None:intergenic
AGATCAATCTTATTTGAGAA+TGG 0.446802 3:-95538007 MsG0380017376.01.T01:CDS
GAACTAGAGGTGGCAAAACT+TGG 0.447157 3:+95537649 None:intergenic
AGCCATACAGAAGCATTTAT+GGG 0.448496 3:+95536926 None:intergenic
GTTGCTGCTGTTAATCAGTT+AGG 0.449852 3:-95538553 MsG0380017376.01.T01:CDS
TGAAGAATATTCTGATTAAC+GGG 0.453613 3:+95537796 None:intergenic
GATCAATCTTATTTGAGAAT+GGG 0.453918 3:-95538006 MsG0380017376.01.T01:CDS
ATCCGGGAATTTATTTGGGA+TGG 0.454627 3:+95537678 None:intergenic
AGCTTAAATCCATCCATGTC+AGG 0.455967 3:+95539120 None:intergenic
GGTAAGTAGCATCCTGATTA+CGG 0.456384 3:+95537236 None:intergenic
GACTAAGAAAAGAAAGGATC+AGG 0.456770 3:-95538680 MsG0380017376.01.T01:CDS
GCTTCTTTGCCCTTGCAAGC+GGG 0.456904 3:-95537361 MsG0380017376.01.T01:CDS
GGAGGTATAGGAATAGGATA+TGG 0.457148 3:-95537559 MsG0380017376.01.T01:CDS
TGCTGGCTTATGATATTAGC+TGG 0.457220 3:+95537040 None:intergenic
GGCTTCTTTGCCCTTGCAAG+CGG 0.465152 3:-95537362 MsG0380017376.01.T01:CDS
CAAAACTTGGCCGTTGATCC+GGG 0.465888 3:+95537662 None:intergenic
GAAGATGAGGATAAAGAGAA+TGG 0.467439 3:-95538649 MsG0380017376.01.T01:CDS
AATTCACCTGAGTATATAAA+CGG 0.467724 3:-95537286 MsG0380017376.01.T01:CDS
GAGCTAGTTGTTGTCTGGCC+TGG 0.468240 3:+95537151 None:intergenic
AGCACTCCAACTAGTCTTAA+CGG 0.475574 3:-95537916 MsG0380017376.01.T01:CDS
GATTATTAGAAAACTTCTGC+TGG 0.476268 3:+95537023 None:intergenic
GCACTCCAACTAGTCTTAAC+GGG 0.477672 3:-95537915 MsG0380017376.01.T01:CDS
TCCAAAACCATGAGACAAGT+TGG 0.479542 3:+95540316 None:intergenic
AATTATCCCACTAGGTGAAA+AGG 0.479567 3:+95537948 None:intergenic
CGACGATCCAACTTGTCTCA+TGG 0.481091 3:-95540323 MsG0380017376.01.T01:CDS
CCAGCATGCTTCATTTGTAT+GGG 0.481160 3:+95537103 None:intergenic
TTTAGCTCCTCTAATCTCAC+AGG 0.481770 3:+95538847 None:intergenic
AGGATGGGAAGACCGTAATC+AGG 0.483908 3:-95537248 MsG0380017376.01.T01:CDS
TTTAAGCTGCTTGAACTTGT+GGG 0.484142 3:-95539105 MsG0380017376.01.T01:CDS
ACCAGGATACCCCGCTTGCA+AGG 0.485505 3:+95537351 None:intergenic
AACAGAGAAAAGAGTGGTAA+TGG 0.486289 3:+95540441 None:intergenic
TCCGGGAATTTATTTGGGAT+GGG 0.491640 3:+95537679 None:intergenic
CCATGCCCGTTAAGACTAGT+TGG 0.492442 3:+95537910 None:intergenic
CAGGGAATGCCAATGTCCAT+AGG 0.498172 3:-95537775 MsG0380017376.01.T01:CDS
CCCATACAAATGAAGCATGC+TGG 0.498373 3:-95537103 MsG0380017376.01.T01:CDS
GTTAATCAGAATATTCTTCA+GGG 0.498546 3:-95537793 MsG0380017376.01.T01:CDS
TCCGATGGGAAAACGGTCAC+CGG 0.502454 3:+95540366 None:intergenic
TCTTTCTCTATGCTGGATCA+AGG 0.503800 3:-95537496 MsG0380017376.01.T01:CDS
TTTGTTTGGATTCCAGATAA+CGG 0.510003 3:+95537442 None:intergenic
GTAATTTGCCATTTCAAGGA+TGG 0.513037 3:-95537264 MsG0380017376.01.T01:CDS
GAAGAAGAAGTCTGATCCAA+AGG 0.514805 3:-95538800 MsG0380017376.01.T01:CDS
GACAAAACTACTTCTGATAG+TGG 0.516959 3:-95538754 MsG0380017376.01.T01:CDS
TTTGAGATACCGAGACTTGG+AGG 0.517387 3:+95537622 None:intergenic
GAACGTGGCAAGCCATCTCC+AGG 0.523004 3:-95538191 MsG0380017376.01.T01:intron
ATTTAAGCTGCTTGAACTTG+TGG 0.531591 3:-95539106 MsG0380017376.01.T01:CDS
ATACTTGGCGAGTTCAATGA+TGG 0.533419 3:-95536987 MsG0380017376.01.T01:CDS
CTAGTATGGTGGCAGCCTTA+GGG 0.534344 3:-95538035 MsG0380017376.01.T01:CDS
TGTTATTGCTTGACTAGTTG+TGG 0.534638 3:+95539206 None:intergenic
CTAGTTGTTGTCTGGCCTGG+TGG 0.535200 3:+95537154 None:intergenic
CTTCTTTGCCCTTGCAAGCG+GGG 0.537483 3:-95537360 MsG0380017376.01.T01:CDS
TAATTTGCCATTTCAAGGAT+GGG 0.541605 3:-95537263 MsG0380017376.01.T01:CDS
AAATTACCGTTTATATACTC+AGG 0.541639 3:+95537280 None:intergenic
GCCTCGGGTTGTTTGGTCTG+TGG 0.542268 3:-95538593 MsG0380017376.01.T01:CDS
GGCAGTGGACTAAGATCCGC+AGG 0.543371 3:-95538733 MsG0380017376.01.T01:CDS
TAACGGGAGTTATGGCTGAC+TGG 0.548521 3:+95537812 None:intergenic
ACTACTTCTGATAGTGGCAG+TGG 0.549024 3:-95538748 MsG0380017376.01.T01:CDS
TACCACTCAAATGTTACTTG+TGG 0.549615 3:-95537217 MsG0380017376.01.T01:CDS
TTGTTTGAGATACCGAGACT+TGG 0.550776 3:+95537619 None:intergenic
TGTGCACATCACTGATTACC+AGG 0.551505 3:+95539145 None:intergenic
CATCAGCTCAGAAGAAGCCT+CGG 0.554303 3:-95538609 MsG0380017376.01.T01:CDS
GGCGAGAACACGCATTCCGA+TGG 0.558372 3:+95540351 None:intergenic
CCAGGATACCCCGCTTGCAA+GGG 0.561131 3:+95537352 None:intergenic
CAAATAAATTCCCGGATCAA+CGG 0.562184 3:-95537672 MsG0380017376.01.T01:CDS
AGTCTCGGTATCTCAAACAA+TGG 0.562603 3:-95537616 MsG0380017376.01.T01:CDS
CAGATAATCACAGGCACCAT+GGG 0.562735 3:+95538876 None:intergenic
GGCGAGTTCAATGATGGGAC+AGG 0.562860 3:-95536981 MsG0380017376.01.T01:CDS
CAATCTTATTTGAGAATGGG+TGG 0.565295 3:-95538003 MsG0380017376.01.T01:CDS
GAGGCTTCTTCTGAGCTGAT+GGG 0.565647 3:+95538611 None:intergenic
AGTTCTCATCCTCCAAGTCT+CGG 0.566191 3:-95537631 MsG0380017376.01.T01:CDS
AAAGCTGACTAAGAAAAGAA+AGG 0.566687 3:-95538686 MsG0380017376.01.T01:CDS
AGGGAATGCCAATGTCCATA+GGG 0.567298 3:-95537774 MsG0380017376.01.T01:CDS
TTGCAAGTGATCAAACCCTA+TGG 0.568247 3:+95537759 None:intergenic
TCTCTATGCTGGATCAAGGT+AGG 0.568314 3:-95537492 MsG0380017376.01.T01:CDS
TGATCACTTGCAAAACAGCA+AGG 0.568375 3:-95537749 MsG0380017376.01.T01:CDS
AGATTGATCTGCACTCCCTA+AGG 0.568615 3:+95538020 None:intergenic
GACAACAACTAGCTCCACCT+TGG 0.570450 3:-95537143 MsG0380017376.01.T01:CDS
CTCAAACAATGGCTTGATGT+CGG 0.579465 3:-95537605 MsG0380017376.01.T01:CDS
TGTTCCTCCTTCAGATAACA+TGG 0.580834 3:-95537383 MsG0380017376.01.T01:CDS
ATCAGCTCAGAAGAAGCCTC+GGG 0.581453 3:-95538608 MsG0380017376.01.T01:CDS
AGATCCCCACTTACTTATGA+CGG 0.584541 3:+95539065 None:intergenic
CCAACTAGTCTTAACGGGCA+TGG 0.588692 3:-95537910 MsG0380017376.01.T01:CDS
GCAGATAATCACAGGCACCA+TGG 0.592029 3:+95538875 None:intergenic
TGATCAAACCCTATGGACAT+TGG 0.593062 3:+95537766 None:intergenic
TGCATATGGTGATACAAAGC+TGG 0.593897 3:-95538914 MsG0380017376.01.T01:CDS
GATCCCCACTTACTTATGAC+GGG 0.593976 3:+95539066 None:intergenic
AGAAAATTCTGAATGTTGAG+AGG 0.594209 3:+95537516 None:intergenic
GTGCACATGCCTGACATGGA+TGG 0.600433 3:-95539129 MsG0380017376.01.T01:CDS
CCCAACTGAAGAAGCCCCGA+AGG 0.603189 3:+95537880 None:intergenic
AAAGAAGCCATGTTATCTGA+AGG 0.609057 3:+95537376 None:intergenic
AGGTTTCAGCAGATAATCAC+AGG 0.609824 3:+95538867 None:intergenic
GATCACTTGCAAAACAGCAA+GGG 0.610593 3:-95537748 MsG0380017376.01.T01:CDS
TGAGCTGCATTCAGTTAACT+CGG 0.614968 3:+95537075 None:intergenic
TGATGTGCACATGCCTGACA+TGG 0.615041 3:-95539133 MsG0380017376.01.T01:CDS
TCAGGATGAAGACGAAGATG+AGG 0.615403 3:-95538662 MsG0380017376.01.T01:CDS
ACAAGTTGGATCGTCGTCAA+CGG 0.615563 3:+95540330 None:intergenic
GCGAGAACACGCATTCCGAT+GGG 0.617268 3:+95540352 None:intergenic
GACCGTGGTATTGACATCTA+CGG 0.617438 3:+95540284 None:intergenic
ATATCTGGCAACGAACCACC+AGG 0.619562 3:+95537334 None:intergenic
TTGCCAGATATGCACTCCCA+AGG 0.620552 3:-95537322 MsG0380017376.01.T01:CDS
ATGCTGGATCAAGGTAGGCA+CGG 0.622381 3:-95537487 MsG0380017376.01.T01:CDS
ATCCACAAGTAACATTTGAG+TGG 0.625700 3:+95537215 None:intergenic
CCCACTTACTTATGACGGGA+AGG 0.626480 3:+95539070 None:intergenic
AGATTACCAATTATCCCACT+AGG 0.628251 3:+95537940 None:intergenic
GAAGCCATGTTATCTGAAGG+AGG 0.632238 3:+95537379 None:intergenic
GATACAAAGCTGGTGATGAA+AGG 0.634012 3:-95538904 MsG0380017376.01.T01:CDS
AAATATCACAAGGGAGAACG+TGG 0.641409 3:-95538206 MsG0380017376.01.T01:CDS
TACTTGGCGAGTTCAATGAT+GGG 0.644216 3:-95536986 MsG0380017376.01.T01:CDS
TTGCAAGCGGGGTATCCTGG+TGG 0.644472 3:-95537349 MsG0380017376.01.T01:CDS
ACTTGGAGGATGAGAACTAG+AGG 0.662512 3:+95537636 None:intergenic
TAACAGCAGCAACAAACTTG+CGG 0.664827 3:+95538563 None:intergenic
TGGAGGATGAGAACTAGAGG+TGG 0.666225 3:+95537639 None:intergenic
TCCACAGACCAAACAACCCG+AGG 0.670707 3:+95538592 None:intergenic
AAACAAAGACAAGTTTGACC+TGG 0.671629 3:-95539163 MsG0380017376.01.T01:CDS
CTCCGTAGATGTCAATACCA+CGG 0.676022 3:-95540286 MsG0380017376.01.T01:intron
TGAATGTCGAAAATATCACA+AGG 0.689686 3:-95538216 MsG0380017376.01.T01:CDS
GTGATGAAAGGAATTTCCCA+TGG 0.694201 3:-95538892 MsG0380017376.01.T01:CDS
ACGCACCCTGAAAGAAAACA+CGG 0.699020 3:-95537580 MsG0380017376.01.T01:CDS
CTATGAAACAGAGAAAAGAG+TGG 0.699177 3:+95540435 None:intergenic
AAACCAACAAGCTAGTATGG+TGG 0.708833 3:-95538046 MsG0380017376.01.T01:CDS
GAATGTCGAAAATATCACAA+GGG 0.725612 3:-95538215 MsG0380017376.01.T01:CDS
AGAGAATGGTAATGACAACG+AGG 0.788270 3:-95538635 MsG0380017376.01.T01:CDS
CACCCTGAAAGAAAACACGG+AGG 0.809478 3:-95537577 MsG0380017376.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAAAAACATGTCTTT+AGG - Chr3:95537401-95537420 MsG0380017376.01.T01:CDS 15.0%
!! ATTAAAAAATTTAGTATCCA+AGG + Chr3:95540365-95540384 None:intergenic 15.0%
!! TCAAAATGAATAAATAGAAA+AGG + Chr3:95538482-95538501 None:intergenic 15.0%
!!! ACATTTTTTGAATATAATGT+TGG - Chr3:95540535-95540554 MsG0380017376.01.T01:five_prime_UTR 15.0%
!!! ATATATTTCATTTTGTTTAG+TGG - Chr3:95537836-95537855 MsG0380017376.01.T01:CDS 15.0%
!!! ATCATATCAAGAATTTTTTT+GGG + Chr3:95539253-95539272 None:intergenic 15.0%
!!! GTTTTTTTTATTTGAATTTC+TGG + Chr3:95537393-95537412 None:intergenic 15.0%
!! AATTAGTAAAAATCATTCCT+TGG + Chr3:95540186-95540205 None:intergenic 20.0%
!! AATTGTTTAAATTACGTGAT+TGG + Chr3:95539634-95539653 None:intergenic 20.0%
!! ATAATACTCAAATTCAGTAA+TGG + Chr3:95539197-95539216 None:intergenic 20.0%
!! ATATCTAGTAAAAATATGCT+TGG + Chr3:95537738-95537757 None:intergenic 20.0%
!! ATTAACACCAAAACAAAAAA+TGG + Chr3:95537892-95537911 None:intergenic 20.0%
!! ATTAGTAAAAATCATTCCTT+GGG + Chr3:95540185-95540204 None:intergenic 20.0%
!!! CAATTTTTACAGATTTTATG+TGG - Chr3:95537602-95537621 MsG0380017376.01.T01:CDS 20.0%
!!! CATCATATCAAGAATTTTTT+TGG + Chr3:95539254-95539273 None:intergenic 20.0%
!!! TATTTTTACTAGATATGTGA+AGG - Chr3:95537742-95537761 MsG0380017376.01.T01:CDS 20.0%
!!! TCAAAATGTTTTTGAATATC+TGG - Chr3:95539058-95539077 MsG0380017376.01.T01:intron 20.0%
! AAAAAATTTAGTATCCAAGG+TGG + Chr3:95540362-95540381 None:intergenic 25.0%
! AAATTACCGTTTATATACTC+AGG + Chr3:95540211-95540230 None:intergenic 25.0%
! AACGATATTGTGTAGATATT+TGG - Chr3:95537461-95537480 MsG0380017376.01.T01:CDS 25.0%
! AAGAAAAAAATTAACAGCTG+AGG + Chr3:95538459-95538478 None:intergenic 25.0%
! AATTCACCTGAGTATATAAA+CGG - Chr3:95540202-95540221 MsG0380017376.01.T01:intron 25.0%
! ATAAAAATTGTTTGTGTTGC+AGG + Chr3:95538986-95539005 None:intergenic 25.0%
! ATGAAAAGAGTCATGATTTA+GGG - Chr3:95537509-95537528 MsG0380017376.01.T01:CDS 25.0%
! ATTTCTTTCACTGAATGTTT+CGG - Chr3:95539362-95539381 MsG0380017376.01.T01:intron 25.0%
! CAAAGACAAGAAAAGAAAAA+TGG + Chr3:95538092-95538111 None:intergenic 25.0%
! CTGAAGAATATTCTGATTAA+CGG + Chr3:95539696-95539715 None:intergenic 25.0%
! GTTAATCAGAATATTCTTCA+GGG - Chr3:95539695-95539714 MsG0380017376.01.T01:intron 25.0%
! TAAAGAACTAGAAAAATACC+TGG + Chr3:95539318-95539337 None:intergenic 25.0%
! TAATGGAATACTTTATGACA+TGG + Chr3:95539180-95539199 None:intergenic 25.0%
! TACTAATCATGAAGAAATAC+AGG + Chr3:95538148-95538167 None:intergenic 25.0%
! TGAAGAATATTCTGATTAAC+GGG + Chr3:95539695-95539714 None:intergenic 25.0%
! TGTTTCTTTATACTATCACA+GGG + Chr3:95537584-95537603 None:intergenic 25.0%
!! AGATCAATCTTATTTGAGAA+TGG - Chr3:95539481-95539500 MsG0380017376.01.T01:intron 25.0%
!! CAGAAGTTTTCTAATAATCT+TGG - Chr3:95540469-95540488 MsG0380017376.01.T01:five_prime_UTR 25.0%
!! GATCAATCTTATTTGAGAAT+GGG - Chr3:95539482-95539501 MsG0380017376.01.T01:intron 25.0%
!! GGAACTTTTACTAAGAATAA+AGG - Chr3:95537482-95537501 MsG0380017376.01.T01:CDS 25.0%
!! TTGAAGAGAAAGAATTTGTT+TGG + Chr3:95540063-95540082 None:intergenic 25.0%
!! TTGTTTCTTTATACTATCAC+AGG + Chr3:95537585-95537604 None:intergenic 25.0%
!!! AAGTGATACTTATTTCTGAT+TGG - Chr3:95538247-95538266 MsG0380017376.01.T01:CDS 25.0%
!!! AATGATTAATTTTGGTAACG+AGG + Chr3:95537004-95537023 None:intergenic 25.0%
!!! AGTGATACTTATTTCTGATT+GGG - Chr3:95538248-95538267 MsG0380017376.01.T01:CDS 25.0%
!!! ATGATTAATTTTGGTAACGA+GGG + Chr3:95537003-95537022 None:intergenic 25.0%
!!! CGATGTTTATTTTAAATCCT+AGG - Chr3:95539083-95539102 MsG0380017376.01.T01:CDS 25.0%
!!! TCATAAGTCATTTTAAACCT+AGG + Chr3:95539103-95539122 None:intergenic 25.0%
!!! TCATTTTGACTCTTGTTTAT+TGG - Chr3:95538493-95538512 MsG0380017376.01.T01:intron 25.0%
AAAGCTGACTAAGAAAAGAA+AGG - Chr3:95538802-95538821 MsG0380017376.01.T01:CDS 30.0%
AAGTCAACACACTATGAATT+TGG + Chr3:95537544-95537563 None:intergenic 30.0%
ACTTAATTATGTGCTTGCTT+GGG - Chr3:95537704-95537723 MsG0380017376.01.T01:CDS 30.0%
AGAAAATTCTGAATGTTGAG+AGG + Chr3:95539975-95539994 None:intergenic 30.0%
ATAAAATTCAGTAAAGCTCG+AGG + Chr3:95539022-95539041 None:intergenic 30.0%
CGTTAATCAGAATATTCTTC+AGG - Chr3:95539694-95539713 MsG0380017376.01.T01:intron 30.0%
GAAACATTCAGTGAAAGAAA+TGG + Chr3:95539363-95539382 None:intergenic 30.0%
GAATGTCGAAAATATCACAA+GGG - Chr3:95539273-95539292 MsG0380017376.01.T01:intron 30.0%
GATGAAAAGAGTCATGATTT+AGG - Chr3:95537508-95537527 MsG0380017376.01.T01:CDS 30.0%
GATTATTAGAAAACTTCTGC+TGG + Chr3:95540468-95540487 None:intergenic 30.0%
GCAGAAAATTCAGATGAAAA+TGG - Chr3:95538779-95538798 MsG0380017376.01.T01:CDS 30.0%
TGAATGTCGAAAATATCACA+AGG - Chr3:95539272-95539291 MsG0380017376.01.T01:intron 30.0%
TTCTAATAATCTTGGTTCAC+TGG - Chr3:95540477-95540496 MsG0380017376.01.T01:five_prime_UTR 30.0%
TTGACTATAACCAAGTGATT+GGG + Chr3:95538069-95538088 None:intergenic 30.0%
TTTCTTTCACTGAATGTTTC+GGG - Chr3:95539363-95539382 MsG0380017376.01.T01:intron 30.0%
TTTGTTTGGATTCCAGATAA+CGG + Chr3:95540049-95540068 None:intergenic 30.0%
! AAGCAATGAAGCTCTAATTA+CGG + Chr3:95537773-95537792 None:intergenic 30.0%
! AGAATTTTCTTTCTCTATGC+TGG - Chr3:95539985-95540004 MsG0380017376.01.T01:intron 30.0%
! TAATTTGCCATTTCAAGGAT+GGG - Chr3:95540225-95540244 MsG0380017376.01.T01:intron 30.0%
! TTGTTTTCACATCAGTATTC+AGG + Chr3:95539784-95539803 None:intergenic 30.0%
!! AATGTTTCGGGTTTATGAAA+TGG - Chr3:95539375-95539394 MsG0380017376.01.T01:intron 30.0%
!! ACTGATTTGTGAGAGAAAAA+TGG - Chr3:95537093-95537112 MsG0380017376.01.T01:CDS 30.0%
!! CTGGAATTTAAGTTGATCAT+TGG + Chr3:95539660-95539679 None:intergenic 30.0%
!! CTTTAGGATCAAATCTAACT+GGG - Chr3:95537417-95537436 MsG0380017376.01.T01:CDS 30.0%
!! GTGATACTTATTTCTGATTG+GGG - Chr3:95538249-95538268 MsG0380017376.01.T01:CDS 30.0%
!! TCTTTAGGATCAAATCTAAC+TGG - Chr3:95537416-95537435 MsG0380017376.01.T01:CDS 30.0%
!! TTCACTGTTGCTTTCTTTAT+TGG - Chr3:95538186-95538205 MsG0380017376.01.T01:intron 30.0%
!! TTCATTTTGTTTAGTGGCTT+TGG - Chr3:95537842-95537861 MsG0380017376.01.T01:CDS 30.0%
!!! TAATGTTGTTTTACTTGCAG+AGG - Chr3:95539222-95539241 MsG0380017376.01.T01:intron 30.0%
!!! TGGTCATCCATTTTTTGTTT+TGG - Chr3:95537882-95537901 MsG0380017376.01.T01:CDS 30.0%
AAACAAAGACAAGTTTGACC+TGG - Chr3:95538325-95538344 MsG0380017376.01.T01:intron 35.0%
AAAGAAGCCATGTTATCTGA+AGG + Chr3:95540115-95540134 None:intergenic 35.0%
AACAGAGAAAAGAGTGGTAA+TGG + Chr3:95537050-95537069 None:intergenic 35.0%
AATATTCCGGAGTTTAGTCA+GGG - Chr3:95537957-95537976 MsG0380017376.01.T01:CDS 35.0%
AATTATCCCACTAGGTGAAA+AGG + Chr3:95539543-95539562 None:intergenic 35.0%
ACATTTGGCAGCATGTAATT+AGG - Chr3:95538666-95538685 MsG0380017376.01.T01:CDS 35.0%
ACTAGAAAAATACCTGGAGA+TGG + Chr3:95539312-95539331 None:intergenic 35.0%
AGAAAGAGAGAGCGAAAAAT+GGG + Chr3:95536945-95536964 None:intergenic 35.0%
AGATTACCAATTATCCCACT+AGG + Chr3:95539551-95539570 None:intergenic 35.0%
ATCCACAAGTAACATTTGAG+TGG + Chr3:95540276-95540295 None:intergenic 35.0%
ATTCTGATTAACGGGAGTTA+TGG + Chr3:95539687-95539706 None:intergenic 35.0%
ATTTAAGCTGCTTGAACTTG+TGG - Chr3:95538382-95538401 MsG0380017376.01.T01:intron 35.0%
ATTTCAGTGTTGTCTGCATA+TGG - Chr3:95538560-95538579 MsG0380017376.01.T01:CDS 35.0%
CAAATAAATTCCCGGATCAA+CGG - Chr3:95539816-95539835 MsG0380017376.01.T01:intron 35.0%
CACTTAATTATGTGCTTGCT+TGG - Chr3:95537703-95537722 MsG0380017376.01.T01:CDS 35.0%
CTATGAAACAGAGAAAAGAG+TGG + Chr3:95537056-95537075 None:intergenic 35.0%
GAAATGAAATTCATCCCAAG+TGG + Chr3:95539135-95539154 None:intergenic 35.0%
GAAGATGAGGATAAAGAGAA+TGG - Chr3:95538839-95538858 MsG0380017376.01.T01:CDS 35.0%
GACAAAACTACTTCTGATAG+TGG - Chr3:95538734-95538753 MsG0380017376.01.T01:CDS 35.0%
GACTAAGAAAAGAAAGGATC+AGG - Chr3:95538808-95538827 MsG0380017376.01.T01:CDS 35.0%
GAGAGAAAAATGGATGATTC+CGG - Chr3:95537103-95537122 MsG0380017376.01.T01:CDS 35.0%
GATCAAATCTAACTGGGAAA+TGG - Chr3:95537423-95537442 MsG0380017376.01.T01:CDS 35.0%
GTTGACTATAACCAAGTGAT+TGG + Chr3:95538070-95538089 None:intergenic 35.0%
GTTGATCCGGGAATTTATTT+GGG + Chr3:95539817-95539836 None:intergenic 35.0%
TAATATTCCGGAGTTTAGTC+AGG - Chr3:95537956-95537975 MsG0380017376.01.T01:CDS 35.0%
TAGAGGAGCTAAAGAACATT+TGG - Chr3:95538651-95538670 MsG0380017376.01.T01:CDS 35.0%
TGACTAAACTCCGGAATATT+AGG + Chr3:95537957-95537976 None:intergenic 35.0%
TGGACTGAATATGCACTTTA+TGG - Chr3:95537862-95537881 MsG0380017376.01.T01:CDS 35.0%
TTATGATGATAGATGCCACT+TGG - Chr3:95539117-95539136 MsG0380017376.01.T01:CDS 35.0%
TTCCCATAAATGCTTCTGTA+TGG - Chr3:95540560-95540579 MsG0380017376.01.T01:five_prime_UTR 35.0%
TTTAAGCTGCTTGAACTTGT+GGG - Chr3:95538383-95538402 MsG0380017376.01.T01:intron 35.0%
! AACGGTAATTTGCCATTTCA+AGG - Chr3:95540220-95540239 MsG0380017376.01.T01:intron 35.0%
! ACTGTTGTTGCTTAGATTTC+AGG - Chr3:95538120-95538139 MsG0380017376.01.T01:intron 35.0%
! ATGAGCAACTTTTCCTACTA+CGG + Chr3:95537808-95537827 None:intergenic 35.0%
! CAATCTTATTTGAGAATGGG+TGG - Chr3:95539485-95539504 MsG0380017376.01.T01:intron 35.0%
! GTAATTTGCCATTTCAAGGA+TGG - Chr3:95540224-95540243 MsG0380017376.01.T01:intron 35.0%
! TACCACTCAAATGTTACTTG+TGG - Chr3:95540271-95540290 MsG0380017376.01.T01:intron 35.0%
! TATGATGATAGATGCCACTT+GGG - Chr3:95539118-95539137 MsG0380017376.01.T01:CDS 35.0%
! TGTTATTGCTTGACTAGTTG+TGG + Chr3:95538285-95538304 None:intergenic 35.0%
! TTTTCACCTAGTGGGATAAT+TGG - Chr3:95539542-95539561 MsG0380017376.01.T01:intron 35.0%
!! AAGCCATACAGAAGCATTTA+TGG + Chr3:95540566-95540585 None:intergenic 35.0%
!! AGCCATACAGAAGCATTTAT+GGG + Chr3:95540565-95540584 None:intergenic 35.0%
!!! AGTAGTTTTGTCTGGTTTAC+TGG + Chr3:95538726-95538745 None:intergenic 35.0%
!!! CTATCAGAAGTAGTTTTGTC+TGG + Chr3:95538734-95538753 None:intergenic 35.0%
!!! CTGGTTTTGTTTTTCTCCTT+TGG + Chr3:95538707-95538726 None:intergenic 35.0%
!!! GTCTTTGTTTTCTCTCAACA+TGG + Chr3:95538315-95538334 None:intergenic 35.0%
AAACCAACAAGCTAGTATGG+TGG - Chr3:95539442-95539461 MsG0380017376.01.T01:intron 40.0%
AAATATCACAAGGGAGAACG+TGG - Chr3:95539282-95539301 MsG0380017376.01.T01:intron 40.0%
AACTCTCTTGCTCCAGTTAA+CGG - Chr3:95540301-95540320 MsG0380017376.01.T01:CDS 40.0%
AGATCCCCACTTACTTATGA+CGG + Chr3:95538426-95538445 None:intergenic 40.0%
AGCTTAAATCCATCCATGTC+AGG + Chr3:95538371-95538390 None:intergenic 40.0%
AGGTTTCAGCAGATAATCAC+AGG + Chr3:95538624-95538643 None:intergenic 40.0%
AGTCTCGGTATCTCAAACAA+TGG - Chr3:95539872-95539891 MsG0380017376.01.T01:intron 40.0%
ATACTTGGCGAGTTCAATGA+TGG - Chr3:95540501-95540520 MsG0380017376.01.T01:five_prime_UTR 40.0%
ATCCGGGAATTTATTTGGGA+TGG + Chr3:95539813-95539832 None:intergenic 40.0%
CCAGCATGCTTCATTTGTAT+GGG + Chr3:95540388-95540407 None:intergenic 40.0%
CGTTGATCCGGGAATTTATT+TGG + Chr3:95539818-95539837 None:intergenic 40.0%
CTAAACTCCGGAATATTAGG+AGG + Chr3:95537954-95537973 None:intergenic 40.0%
CTCAAACAATGGCTTGATGT+CGG - Chr3:95539883-95539902 MsG0380017376.01.T01:intron 40.0%
GAAAGAGAGAGCGAAAAATG+GGG + Chr3:95536944-95536963 None:intergenic 40.0%
GAAGAAGAAGTCTGATCCAA+AGG - Chr3:95538688-95538707 MsG0380017376.01.T01:CDS 40.0%
GAGAAAGAGAGAGCGAAAAA+TGG + Chr3:95536946-95536965 None:intergenic 40.0%
GATCACTTGCAAAACAGCAA+GGG - Chr3:95539740-95539759 MsG0380017376.01.T01:intron 40.0%
GCTTCTGTATGGCTTCTTTA+AGG - Chr3:95540571-95540590 MsG0380017376.01.T01:five_prime_UTR 40.0%
GGTAACGAGGGAAATGAAAT+GGG + Chr3:95536991-95537010 None:intergenic 40.0%
GGTAAGTAGCATCCTGATTA+CGG + Chr3:95540255-95540274 None:intergenic 40.0%
GTGATGAAAGGAATTTCCCA+TGG - Chr3:95538596-95538615 MsG0380017376.01.T01:CDS 40.0%
GTTGCTGCTGTTAATCAGTT+AGG - Chr3:95538935-95538954 MsG0380017376.01.T01:intron 40.0%
TAACAGCAGCAACAAACTTG+CGG + Chr3:95538928-95538947 None:intergenic 40.0%
TACTTGGCGAGTTCAATGAT+GGG - Chr3:95540502-95540521 MsG0380017376.01.T01:five_prime_UTR 40.0%
TAGAGCTTCATTGCTTGTAG+AGG - Chr3:95537777-95537796 MsG0380017376.01.T01:CDS 40.0%
TATTTGAGAATGGGTGGTTC+TGG - Chr3:95539491-95539510 MsG0380017376.01.T01:intron 40.0%
TCCAAAACCATGAGACAAGT+TGG + Chr3:95537175-95537194 None:intergenic 40.0%
TCCAGCATGCTTCATTTGTA+TGG + Chr3:95540389-95540408 None:intergenic 40.0%
TCCCATCCCAAATAAATTCC+CGG - Chr3:95539808-95539827 MsG0380017376.01.T01:intron 40.0%
TCTAACTGGGAAATGGAGTT+AGG - Chr3:95537430-95537449 MsG0380017376.01.T01:CDS 40.0%
TCTTGGTTCACTGGAATACT+TGG - Chr3:95540486-95540505 MsG0380017376.01.T01:five_prime_UTR 40.0%
TCTTTCTCTATGCTGGATCA+AGG - Chr3:95539992-95540011 MsG0380017376.01.T01:intron 40.0%
TGAACTTGTGGGACTTGAAA+TGG - Chr3:95538394-95538413 MsG0380017376.01.T01:intron 40.0%
TGAGCTGCATTCAGTTAACT+CGG + Chr3:95540416-95540435 None:intergenic 40.0%
TGATCAAACCCTATGGACAT+TGG + Chr3:95539725-95539744 None:intergenic 40.0%
TGATCACTTGCAAAACAGCA+AGG - Chr3:95539739-95539758 MsG0380017376.01.T01:intron 40.0%
TGATTGGGATCAAGAGGTTA+AGG + Chr3:95538054-95538073 None:intergenic 40.0%
TGCAAACCAACAAGCTAGTA+TGG - Chr3:95539439-95539458 MsG0380017376.01.T01:intron 40.0%
TGCATATGGTGATACAAAGC+TGG - Chr3:95538574-95538593 MsG0380017376.01.T01:CDS 40.0%
TGTTCCTCCTTCAGATAACA+TGG - Chr3:95540105-95540124 MsG0380017376.01.T01:intron 40.0%
TTGCAAGTGATCAAACCCTA+TGG + Chr3:95539732-95539751 None:intergenic 40.0%
! AAACACGGAGGTATAGGAAT+AGG - Chr3:95539923-95539942 MsG0380017376.01.T01:intron 40.0%
! AGAGAATGGTAATGACAACG+AGG - Chr3:95538853-95538872 MsG0380017376.01.T01:CDS 40.0%
! ATACCTCCGTGTTTTCTTTC+AGG + Chr3:95539917-95539936 None:intergenic 40.0%
! ATCTGAATTTTCTGCTCCTG+CGG + Chr3:95538774-95538793 None:intergenic 40.0%
! GAAAGAAAACACGGAGGTAT+AGG - Chr3:95539917-95539936 MsG0380017376.01.T01:intron 40.0%
! GAGTCATGATTTAGGGTCAA+AGG - Chr3:95537516-95537535 MsG0380017376.01.T01:CDS 40.0%
! GATACAAAGCTGGTGATGAA+AGG - Chr3:95538584-95538603 MsG0380017376.01.T01:CDS 40.0%
! GGAGGTATAGGAATAGGATA+TGG - Chr3:95539929-95539948 MsG0380017376.01.T01:intron 40.0%
! TACCTCCGTGTTTTCTTTCA+GGG + Chr3:95539916-95539935 None:intergenic 40.0%
! TCAGATCCTTTTCACCTAGT+GGG - Chr3:95539534-95539553 MsG0380017376.01.T01:intron 40.0%
! TCCAACTTGTCTCATGGTTT+TGG - Chr3:95537171-95537190 MsG0380017376.01.T01:CDS 40.0%
! TCCGGGAATTTATTTGGGAT+GGG + Chr3:95539812-95539831 None:intergenic 40.0%
! TGGTAACGAGGGAAATGAAA+TGG + Chr3:95536992-95537011 None:intergenic 40.0%
! TTCAGATCCTTTTCACCTAG+TGG - Chr3:95539533-95539552 MsG0380017376.01.T01:intron 40.0%
! TTGTTTGAGATACCGAGACT+TGG + Chr3:95539872-95539891 None:intergenic 40.0%
! TTTAGCTCCTCTAATCTCAC+AGG + Chr3:95538644-95538663 None:intergenic 40.0%
!! AGCACTCCAACTAGTCTTAA+CGG - Chr3:95539572-95539591 MsG0380017376.01.T01:intron 40.0%
!! TGCTGGCTTATGATATTAGC+TGG + Chr3:95540451-95540470 None:intergenic 40.0%
AAGGTAGGCACGGTGATAAT+TGG - Chr3:95540011-95540030 MsG0380017376.01.T01:intron 45.0%
ACCAAGTGATTGGGATCAAG+AGG + Chr3:95538060-95538079 None:intergenic 45.0%
ACCTCTTGATCCCAATCACT+TGG - Chr3:95538056-95538075 MsG0380017376.01.T01:CDS 45.0%
ACCTTCCCGTCATAAGTAAG+TGG - Chr3:95538417-95538436 MsG0380017376.01.T01:intron 45.0%
ACGCACCCTGAAAGAAAACA+CGG - Chr3:95539908-95539927 MsG0380017376.01.T01:intron 45.0%
ACTTGGAGGATGAGAACTAG+AGG + Chr3:95539855-95539874 None:intergenic 45.0%
AGATTGATCTGCACTCCCTA+AGG + Chr3:95539471-95539490 None:intergenic 45.0%
AGGGAATGCCAATGTCCATA+GGG - Chr3:95539714-95539733 MsG0380017376.01.T01:intron 45.0%
AGTTCTCATCCTCCAAGTCT+CGG - Chr3:95539857-95539876 MsG0380017376.01.T01:intron 45.0%
CAGATAATCACAGGCACCAT+GGG + Chr3:95538615-95538634 None:intergenic 45.0%
CCCATACAAATGAAGCATGC+TGG - Chr3:95540385-95540404 MsG0380017376.01.T01:exon 45.0%
CCTTCCCGTCATAAGTAAGT+GGG - Chr3:95538418-95538437 MsG0380017376.01.T01:intron 45.0%
CTCCGTAGATGTCAATACCA+CGG - Chr3:95537202-95537221 MsG0380017376.01.T01:CDS 45.0%
CTCTCGAATGATTCCTCCTA+GGG - Chr3:95538023-95538042 MsG0380017376.01.T01:CDS 45.0%
CTTCCCGTCATAAGTAAGTG+GGG - Chr3:95538419-95538438 MsG0380017376.01.T01:intron 45.0%
GAACTAGAGGTGGCAAAACT+TGG + Chr3:95539842-95539861 None:intergenic 45.0%
GAAGCCATGTTATCTGAAGG+AGG + Chr3:95540112-95540131 None:intergenic 45.0%
GATCCCCACTTACTTATGAC+GGG + Chr3:95538425-95538444 None:intergenic 45.0%
GCTGAAACCTGTGAGATTAG+AGG - Chr3:95538634-95538653 MsG0380017376.01.T01:CDS 45.0%
GTCAATACCACGGTCAGATT+CGG - Chr3:95537212-95537231 MsG0380017376.01.T01:CDS 45.0%
GTCAGGGAGGTAATTGAACT+CGG - Chr3:95537973-95537992 MsG0380017376.01.T01:CDS 45.0%
TCAGGATGAAGACGAAGATG+AGG - Chr3:95538826-95538845 MsG0380017376.01.T01:CDS 45.0%
TCAGGGAGGTAATTGAACTC+GGG - Chr3:95537974-95537993 MsG0380017376.01.T01:CDS 45.0%
TCTCGAATGATTCCTCCTAG+GGG - Chr3:95538024-95538043 MsG0380017376.01.T01:CDS 45.0%
TCTCTATGCTGGATCAAGGT+AGG - Chr3:95539996-95540015 MsG0380017376.01.T01:intron 45.0%
TCTCTCGAATGATTCCTCCT+AGG - Chr3:95538022-95538041 MsG0380017376.01.T01:CDS 45.0%
TGTAGAGGTAGTACCGTAGT+AGG - Chr3:95537792-95537811 MsG0380017376.01.T01:CDS 45.0%
TTACCTCCCTGACTAAACTC+CGG + Chr3:95537966-95537985 None:intergenic 45.0%
! ACAAGTTGGATCGTCGTCAA+CGG + Chr3:95537161-95537180 None:intergenic 45.0%
! ATTCCTTGGGAGTGCATATC+TGG + Chr3:95540172-95540191 None:intergenic 45.0%
! TGTGCACATCACTGATTACC+AGG + Chr3:95538346-95538365 None:intergenic 45.0%
! TTTGAGATACCGAGACTTGG+AGG + Chr3:95539869-95539888 None:intergenic 45.0%
!! ACTACTTCTGATAGTGGCAG+TGG - Chr3:95538740-95538759 MsG0380017376.01.T01:CDS 45.0%
!! GACCGTGGTATTGACATCTA+CGG + Chr3:95537207-95537226 None:intergenic 45.0%
!! GCACTCCAACTAGTCTTAAC+GGG - Chr3:95539573-95539592 MsG0380017376.01.T01:intron 45.0%
!!! TAAATAAAAATGATTAATTT+TGG + Chr3:95537012-95537031 None:intergenic 5.0%
ACTAGATCCGAATCTGACCG+TGG + Chr3:95537222-95537241 None:intergenic 50.0%
AGAACCCGAGCTTGATTCAC+AGG + Chr3:95538005-95538024 None:intergenic 50.0%
AGAGCGAAAAATGGGGTTGG+TGG + Chr3:95536937-95536956 None:intergenic 50.0%
AGGATGGGAAGACCGTAATC+AGG - Chr3:95540240-95540259 MsG0380017376.01.T01:intron 50.0%
AGGTGGAGCTAGTTGTTGTC+TGG + Chr3:95540345-95540364 None:intergenic 50.0%
ATATCTGGCAACGAACCACC+AGG + Chr3:95540157-95540176 None:intergenic 50.0%
ATCAGCTCAGAAGAAGCCTC+GGG - Chr3:95538880-95538899 MsG0380017376.01.T01:CDS 50.0%
ATGCTGGATCAAGGTAGGCA+CGG - Chr3:95540001-95540020 MsG0380017376.01.T01:intron 50.0%
ATTCCGGAGTTTAGTCAGGG+AGG - Chr3:95537960-95537979 MsG0380017376.01.T01:CDS 50.0%
CAAAACTTGGCCGTTGATCC+GGG + Chr3:95539829-95539848 None:intergenic 50.0%
CACCCTGAAAGAAAACACGG+AGG - Chr3:95539911-95539930 MsG0380017376.01.T01:intron 50.0%
CACGCATTCCGATGGGAAAA+CGG + Chr3:95537132-95537151 None:intergenic 50.0%
CAGGGAATGCCAATGTCCAT+AGG - Chr3:95539713-95539732 MsG0380017376.01.T01:intron 50.0%
CATCAGCTCAGAAGAAGCCT+CGG - Chr3:95538879-95538898 MsG0380017376.01.T01:CDS 50.0%
CCATGCCCGTTAAGACTAGT+TGG + Chr3:95539581-95539600 None:intergenic 50.0%
CGACGATCCAACTTGTCTCA+TGG - Chr3:95537165-95537184 MsG0380017376.01.T01:CDS 50.0%
CGGTCTTCCCATCCTTGAAA+TGG + Chr3:95540235-95540254 None:intergenic 50.0%
CTAGTATGGTGGCAGCCTTA+GGG - Chr3:95539453-95539472 MsG0380017376.01.T01:intron 50.0%
CTCGAATGATTCCTCCTAGG+GGG - Chr3:95538025-95538044 MsG0380017376.01.T01:CDS 50.0%
GACAACAACTAGCTCCACCT+TGG - Chr3:95540345-95540364 MsG0380017376.01.T01:CDS 50.0%
GAGAGAGCGAAAAATGGGGT+TGG + Chr3:95536940-95536959 None:intergenic 50.0%
GAGGCTTCTTCTGAGCTGAT+GGG + Chr3:95538880-95538899 None:intergenic 50.0%
GCAAAACTTGGCCGTTGATC+CGG + Chr3:95539830-95539849 None:intergenic 50.0%
GCAGATAATCACAGGCACCA+TGG + Chr3:95538616-95538635 None:intergenic 50.0%
GGAAAAACGGCACCGTTAAC+TGG + Chr3:95540316-95540335 None:intergenic 50.0%
GTTAATCCTCCTGCTCTCGA+GGG - Chr3:95537906-95537925 MsG0380017376.01.T01:CDS 50.0%
TAACGGGAGTTATGGCTGAC+TGG + Chr3:95539679-95539698 None:intergenic 50.0%
TCGAATGATTCCTCCTAGGG+GGG - Chr3:95538026-95538045 MsG0380017376.01.T01:CDS 50.0%
TGATGTGCACATGCCTGACA+TGG - Chr3:95538355-95538374 MsG0380017376.01.T01:intron 50.0%
TGGAGGATGAGAACTAGAGG+TGG + Chr3:95539852-95539871 None:intergenic 50.0%
TGTCTGGCCTGGTGGAAAAA+CGG + Chr3:95540329-95540348 None:intergenic 50.0%
TGTTAATCCTCCTGCTCTCG+AGG - Chr3:95537905-95537924 MsG0380017376.01.T01:CDS 50.0%
TTCCGCCTGTGAATCAAGCT+CGG - Chr3:95537997-95538016 MsG0380017376.01.T01:CDS 50.0%
TTGCCAGATATGCACTCCCA+AGG - Chr3:95540166-95540185 MsG0380017376.01.T01:intron 50.0%
! AGAAGAAGCCTCGGGTTGTT+TGG - Chr3:95538888-95538907 MsG0380017376.01.T01:CDS 50.0%
! CCCACTTACTTATGACGGGA+AGG + Chr3:95538421-95538440 None:intergenic 50.0%
! CGGGCATGGATTTTCTCCTT+CGG - Chr3:95539592-95539611 MsG0380017376.01.T01:intron 50.0%
! CTGCCACCATACTAGCTTGT+TGG + Chr3:95539448-95539467 None:intergenic 50.0%
! GGCATGGATTTTCTCCTTCG+GGG - Chr3:95539594-95539613 MsG0380017376.01.T01:intron 50.0%
! GGGCATGGATTTTCTCCTTC+GGG - Chr3:95539593-95539612 MsG0380017376.01.T01:intron 50.0%
!! CCAACTAGTCTTAACGGGCA+TGG - Chr3:95539578-95539597 MsG0380017376.01.T01:intron 50.0%
ACCCGAGCTTGATTCACAGG+CGG + Chr3:95538002-95538021 None:intergenic 55.0%
CCTTCGGGGCTTCTTCAGTT+GGG - Chr3:95539608-95539627 MsG0380017376.01.T01:intron 55.0%
CGAGGCTTCTTCTGAGCTGA+TGG + Chr3:95538881-95538900 None:intergenic 55.0%
CTAGTTGTTGTCTGGCCTGG+TGG + Chr3:95540337-95540356 None:intergenic 55.0%
CTTCTTTGCCCTTGCAAGCG+GGG - Chr3:95540128-95540147 MsG0380017376.01.T01:intron 55.0%
GAGCTAGTTGTTGTCTGGCC+TGG + Chr3:95540340-95540359 None:intergenic 55.0%
GCGAGAACACGCATTCCGAT+GGG + Chr3:95537139-95537158 None:intergenic 55.0%
GCTAGTATGGTGGCAGCCTT+AGG - Chr3:95539452-95539471 MsG0380017376.01.T01:intron 55.0%
GCTTCTTTGCCCTTGCAAGC+GGG - Chr3:95540127-95540146 MsG0380017376.01.T01:intron 55.0%
GGCTTCTTTGCCCTTGCAAG+CGG - Chr3:95540126-95540145 MsG0380017376.01.T01:intron 55.0%
GGGGAGGCCTCCTAATATTC+CGG - Chr3:95537944-95537963 MsG0380017376.01.T01:CDS 55.0%
GTGCACATGCCTGACATGGA+TGG - Chr3:95538359-95538378 MsG0380017376.01.T01:intron 55.0%
TCCACAGACCAAACAACCCG+AGG + Chr3:95538899-95538918 None:intergenic 55.0%
TCCGATGGGAAAACGGTCAC+CGG + Chr3:95537125-95537144 None:intergenic 55.0%
TCCGCCTGTGAATCAAGCTC+GGG - Chr3:95537998-95538017 MsG0380017376.01.T01:CDS 55.0%
TCCTTCGGGGCTTCTTCAGT+TGG - Chr3:95539607-95539626 MsG0380017376.01.T01:intron 55.0%
! GGCGAGTTCAATGATGGGAC+AGG - Chr3:95540507-95540526 MsG0380017376.01.T01:five_prime_UTR 55.0%
! TCAAGCGACGTGCCGTTATC+TGG - Chr3:95540034-95540053 MsG0380017376.01.T01:intron 55.0%
! TCCGGTGACCGTTTTCCCAT+CGG - Chr3:95537121-95537140 MsG0380017376.01.T01:CDS 55.0%
!!! AACGGTGCCGTTTTTCCACC+AGG - Chr3:95540319-95540338 MsG0380017376.01.T01:CDS 55.0%
ACCAGGATACCCCGCTTGCA+AGG + Chr3:95540140-95540159 None:intergenic 60.0%
AGAGGTTAAGGAGCCCCCCT+AGG + Chr3:95538042-95538061 None:intergenic 60.0%
AGGGAAGGACCCCTCTCAAG+GGG - Chr3:95537925-95537944 MsG0380017376.01.T01:CDS 60.0%
ATCCTCCTGCTCTCGAGGGA+AGG - Chr3:95537910-95537929 MsG0380017376.01.T01:CDS 60.0%
CCAGGATACCCCGCTTGCAA+GGG + Chr3:95540139-95540158 None:intergenic 60.0%
CCCAACTGAAGAAGCCCCGA+AGG + Chr3:95539611-95539630 None:intergenic 60.0%
GAACGTGGCAAGCCATCTCC+AGG - Chr3:95539297-95539316 MsG0380017376.01.T01:intron 60.0%
GAGGGAAGGACCCCTCTCAA+GGG - Chr3:95537924-95537943 MsG0380017376.01.T01:CDS 60.0%
GGCGAGAACACGCATTCCGA+TGG + Chr3:95537140-95537159 None:intergenic 60.0%
TAGGAGGCCTCCCCTTGAGA+GGG + Chr3:95537938-95537957 None:intergenic 60.0%
TTAGGAGGCCTCCCCTTGAG+AGG + Chr3:95537939-95537958 None:intergenic 60.0%
! GCCTCGGGTTGTTTGGTCTG+TGG - Chr3:95538895-95538914 MsG0380017376.01.T01:CDS 60.0%
! TTGCAAGCGGGGTATCCTGG+TGG - Chr3:95540139-95540158 MsG0380017376.01.T01:intron 60.0%
!! GGCAGTGGACTAAGATCCGC+AGG - Chr3:95538755-95538774 MsG0380017376.01.T01:CDS 60.0%
AGGAGGCCTCCCCTTGAGAG+GGG + Chr3:95537937-95537956 None:intergenic 65.0%
CGAGGGAAGGACCCCTCTCA+AGG - Chr3:95537923-95537942 MsG0380017376.01.T01:CDS 65.0%
GAAGGACCCCTCTCAAGGGG+AGG - Chr3:95537928-95537947 MsG0380017376.01.T01:CDS 65.0%
GGTTAAGGAGCCCCCCTAGG+AGG + Chr3:95538039-95538058 None:intergenic 65.0%
GTCCTTCCCTCGAGAGCAGG+AGG + Chr3:95537915-95537934 None:intergenic 65.0%
! CCCTTGCAAGCGGGGTATCC+TGG - Chr3:95540136-95540155 MsG0380017376.01.T01:intron 65.0%
GGGGTCCTTCCCTCGAGAGC+AGG + Chr3:95537918-95537937 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 95536919 95540591 95536919 ID=MsG0380017376.01;Name=MsG0380017376.01
Chr3 mRNA 95536919 95540591 95536919 ID=MsG0380017376.01.T01;Parent=MsG0380017376.01;Name=MsG0380017376.01.T01;_AED=0.38;_eAED=0.38;_QI=193|1|0.8|1|1|1|5|0|642
Chr3 exon 95536919 95538106 95536919 ID=MsG0380017376.01.T01:exon:2174;Parent=MsG0380017376.01.T01
Chr3 exon 95538192 95538268 95538192 ID=MsG0380017376.01.T01:exon:2173;Parent=MsG0380017376.01.T01
Chr3 exon 95538545 95538943 95538545 ID=MsG0380017376.01.T01:exon:2172;Parent=MsG0380017376.01.T01
Chr3 exon 95539079 95539231 95539079 ID=MsG0380017376.01.T01:exon:2171;Parent=MsG0380017376.01.T01
Chr3 exon 95540287 95540591 95540287 ID=MsG0380017376.01.T01:exon:2170;Parent=MsG0380017376.01.T01
Chr3 five_prime_UTR 95540399 95540591 95540399 ID=MsG0380017376.01.T01:five_prime_utr;Parent=MsG0380017376.01.T01
Chr3 CDS 95540287 95540398 95540287 ID=MsG0380017376.01.T01:cds;Parent=MsG0380017376.01.T01
Chr3 CDS 95539079 95539231 95539079 ID=MsG0380017376.01.T01:cds;Parent=MsG0380017376.01.T01
Chr3 CDS 95538545 95538943 95538545 ID=MsG0380017376.01.T01:cds;Parent=MsG0380017376.01.T01
Chr3 CDS 95538192 95538268 95538192 ID=MsG0380017376.01.T01:cds;Parent=MsG0380017376.01.T01
Chr3 CDS 95536919 95538106 95536919 ID=MsG0380017376.01.T01:cds;Parent=MsG0380017376.01.T01
Gene Sequence

>MsG0380017376.01.T01

ATGGATGATTCCGGTGACCGTTTTCCCATCGGAATGCGTGTTCTCGCCGTTGACGACGATCCAACTTGTCTCATGGTTTTGGAAACTCTTCTCCGTAGATGTCAATACCACGTAACCACAACTAGTCAAGCAATAACAGCGTTGACCATGTTGAGAGAAAACAAAGACAAGTTTGACCTGGTAATCAGTGATGTGCACATGCCTGACATGGATGGATTTAAGCTGCTTGAACTTGTGGGACTTGAAATGGACCTTCCCGTCATAATGTTGTCTGCATATGGTGATACAAAGCTGGTGATGAAAGGAATTTCCCATGGTGCCTGTGATTATCTGCTGAAACCTGTGAGATTAGAGGAGCTAAAGAACATTTGGCAGCATGTAATTAGGAAGAAGAAGTCTGATCCAAAGGAGAAAAACAAAACCAGTAAACCAGACAAAACTACTTCTGATAGTGGCAGTGGACTAAGATCCGCAGGAGCAGAAAATTCAGATGAAAATGGAAAGCTGACTAAGAAAAGAAAGGATCAGGATGAAGACGAAGATGAGGATAAAGAGAATGGTAATGACAACGAGGACCCATCAGCTCAGAAGAAGCCTCGGGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGACAAGGCTGTGCCCAAAAAAATTCTTGATATGATGAATGTCGAAAATATCACAAGGGAGAACGTGGCAAGCCATCTCCAGAAGTATAGACTTTATCTGAAAAGAATTAGCTGTGTTGCAAACCAACAAGCTAGTATGGTGGCAGCCTTAGGGAGTGCAGATCAATCTTATTTGAGAATGGGTGGTTCTGGACATTTTCACAATAATGCTTTCAGATCCTTTTCACCTAGTGGGATAATTGGTAATCTGAGCACTCCAACTAGTCTTAACGGGCATGGATTTTCTCCTTCGGGGCTTCTTCAGTTGGGCCAATCACGTAATTTAAACAATTCTTCCAATGATCAACTTAAATTCCAGTCAGCCATAACTCCCGTTAATCAGAATATTCTTCAGGGAATGCCAATGTCCATAGGGTTTGATCACTTGCAAAACAGCAAGGGTGTTATCTCTGTTCAAAACCTGAATACTGATGTGAAAACAACTTTTCCCATCCCAAATAAATTCCCGGATCAACGGCCAAGTTTTGCCACCTCTAGTTCTCATCCTCCAAGTCTCGGTATCTCAAACAATGGCTTGATGTCGGATACGCACCCTGAAAGAAAACACGGAGGTATAGGAATAGGATATGGAAGTTCATCTTCTTCAGTAGCCTCTCAACATTCAGAATTTTCTTTCTCTATGCTGGATCAAGGTAGGCACGGTGATAATTGGTCAAGCGACGTGCCGTTATCTGGAATCCAAACAAATTCTTTCTCTTCAAGTGAATGTTTTAGACAGACAGCTGTTCCTCCTTCAGATAACATGGCTTCTTTGCCCTTGCAAGCGGGGTATCCTGGTGGTTCGTTGCCAGATATGCACTCCCAAGGAATGATTTTTACTAATTCACCTGAGTATATAAACGGTAATTTGCCATTTCAAGGATGGGAAGACCGTAATCAGGATGCTACTTACCACTCAAATGTTACTTGTGGATCAATGAACTCTCTTGCTCCAGTTAACGGTGCCGTTTTTCCACCAGGCCAGACAACAACTAGCTCCACCTTGGATACTAAATTTTTTAATCCCATACAAATGAAGCATGCTGGATTTGCCGAGTTAACTGAATGCAGCTCATCAAGACAATCTCCAGCTAATATCATAAGCCAGCAGAAGTTTTCTAATAATCTTGGTTCACTGGAATACTTGGCGAGTTCAATGATGGGACAGGTAATAACATTTTTTGAATATAATGTTGGTTTTCCCATAAATGCTTCTGTATGGCTTCTTTAA
Protein sequence

>MsG0380017376.01.T01

MDDSGDRFPIGMRVLAVDDDPTCLMVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQHVIRKKKSDPKEKNKTSKPDKTTSDSGSGLRSAGAENSDENGKLTKKRKDQDEDEDEDKENGNDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVENITRENVASHLQKYRLYLKRISCVANQQASMVAALGSADQSYLRMGGSGHFHNNAFRSFSPSGIIGNLSTPTSLNGHGFSPSGLLQLGQSRNLNNSSNDQLKFQSAITPVNQNILQGMPMSIGFDHLQNSKGVISVQNLNTDVKTTFPIPNKFPDQRPSFATSSSHPPSLGISNNGLMSDTHPERKHGGIGIGYGSSSSSVASQHSEFSFSMLDQGRHGDNWSSDVPLSGIQTNSFSSSECFRQTAVPPSDNMASLPLQAGYPGGSLPDMHSQGMIFTNSPEYINGNLPFQGWEDRNQDATYHSNVTCGSMNSLAPVNGAVFPPGQTTTSSTLDTKFFNPIQMKHAGFAELTECSSSRQSPANIISQQKFSNNLGSLEYLASSMMGQVITFFEYNVGFPINASVWLL*