AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017425.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017425.01.T01 MTR_3g107390 90.726 647 9 1 393 988 557 1203 0.0 1201
MsG0380017425.01.T01 MTR_3g107390 70.942 499 58 7 5 416 1 499 0.0 659
MsG0380017425.01.T01 MTR_1g032630 38.401 638 304 11 393 976 503 1105 9.89e-124 404
MsG0380017425.01.T01 MTR_1g032630 30.698 215 131 7 169 374 206 411 1.89e-14 78.6
MsG0380017425.01.T01 MTR_1g032710 40.748 535 282 7 443 976 45 545 7.29e-119 375
MsG0380017425.01.T01 MTR_1g032610 38.756 627 300 9 393 969 446 1038 9.53e-119 389
MsG0380017425.01.T01 MTR_1g032610 27.706 231 117 7 169 374 149 354 4.81e-15 80.5
MsG0380017425.01.T01 MTR_1g032610 38.756 627 300 9 393 969 509 1101 2.70e-118 389
MsG0380017425.01.T01 MTR_1g032610 27.706 231 117 7 169 374 212 417 5.42e-15 80.5
MsG0380017425.01.T01 MTR_1g032720 37.774 638 308 10 393 976 1115 1717 6.24e-112 380
MsG0380017425.01.T01 MTR_1g032720 30.612 245 122 7 169 389 209 429 6.22e-18 90.1
MsG0380017425.01.T01 MTR_1g032720 30.612 245 122 7 169 389 818 1038 6.22e-18 90.1
MsG0380017425.01.T01 MTR_1g032590 36.842 627 309 13 393 958 494 1094 5.11e-110 367
MsG0380017425.01.T01 MTR_1g032590 23.256 430 230 17 21 379 5 405 2.88e-13 74.7
MsG0380017425.01.T01 MTR_4g106660 36.892 637 301 14 393 963 515 1116 6.26e-110 367
MsG0380017425.01.T01 MTR_4g106660 36.295 664 322 14 374 971 496 1124 1.69e-109 369
MsG0380017425.01.T01 MTR_4g106660 47.000 100 53 0 689 788 1116 1215 1.39e-19 95.5
MsG0380017425.01.T01 MTR_1g032630 41.196 301 109 6 393 639 503 789 7.62e-55 205
MsG0380017425.01.T01 MTR_1g032630 30.698 215 131 7 169 374 206 411 2.30e-14 78.2
MsG0380017425.01.T01 MTR_6g088660 23.433 367 228 11 447 785 487 828 4.59e-15 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017425.01.T01 AT3G49500 64.209 651 171 5 393 988 553 1196 0.0 818
MsG0380017425.01.T01 AT3G49500 44.467 497 189 9 5 416 1 495 7.94e-117 387
MsG0380017425.01.T01 AT3G49500 64.209 651 171 5 393 988 553 1196 0.0 818
MsG0380017425.01.T01 AT3G49500 44.467 497 189 9 5 416 1 495 7.94e-117 387
MsG0380017425.01.T01 AT3G49500 64.209 651 171 5 393 988 553 1196 0.0 818
MsG0380017425.01.T01 AT3G49500 44.467 497 189 9 5 416 1 495 7.94e-117 387
MsG0380017425.01.T01 AT3G49500 64.209 651 171 5 393 988 553 1196 0.0 818
MsG0380017425.01.T01 AT3G49500 44.467 497 189 9 5 416 1 495 7.94e-117 387
MsG0380017425.01.T01 AT3G49500 64.209 651 171 5 393 988 553 1196 0.0 818
MsG0380017425.01.T01 AT3G49500 44.467 497 189 9 5 416 1 495 7.94e-117 387
MsG0380017425.01.T01 AT1G14790 30.071 981 460 23 162 983 193 1106 1.20e-119 393
MsG0380017425.01.T01 AT4G11130 36.783 628 299 16 393 958 519 1110 4.11e-104 351
MsG0380017425.01.T01 AT2G05370 39.462 223 84 6 16 214 4 199 2.17e-34 131
MsG0380017425.01.T01 AT2G19930 24.011 354 223 8 455 786 506 835 1.15e-21 102
MsG0380017425.01.T01 AT2G19930 24.011 354 223 8 455 786 500 829 1.20e-21 102
MsG0380017425.01.T01 AT2G19930 24.011 354 223 8 455 786 506 835 1.21e-21 102
MsG0380017425.01.T01 AT2G19910 23.698 384 243 10 455 816 519 874 4.35e-20 97.1
MsG0380017425.01.T01 AT2G19910 23.325 403 257 11 455 835 510 882 4.91e-20 96.7
MsG0380017425.01.T01 AT2G19920 23.018 391 232 15 455 812 523 877 2.66e-16 84.7
MsG0380017425.01.T01 AT2G19920 23.018 391 232 15 455 812 509 863 2.92e-16 84.3
MsG0380017425.01.T01 AT2G19920 23.018 391 232 15 455 812 509 863 2.94e-16 84.3
MsG0380017425.01.T01 AT2G19920 23.018 391 232 15 455 812 510 864 3.05e-16 84.3

Find 236 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATACAAAATGAACCTGATTT+TGG 0.119853 3:-96155250 MsG0380017425.01.T01:CDS
TACAATTTCGGTTTCAAATT+TGG 0.121878 3:+96152823 None:intergenic
TGCTTCCTGCTGTTGTATTT+TGG 0.158211 3:+96152508 None:intergenic
ATTCTTGAGAGTCACCTTTA+TGG 0.162839 3:-96154828 MsG0380017425.01.T01:CDS
TCGGATGTAATCGTCGAAAT+TGG 0.171885 3:-96155765 MsG0380017425.01.T01:CDS
AGGTGACATATCATCCTAAA+TGG 0.214201 3:-96152336 MsG0380017425.01.T01:CDS
TTTGAATGGTAAGGTGTTAA+AGG 0.227665 3:-96155856 MsG0380017425.01.T01:CDS
ACACCTTACCATTCAAAATT+AGG 0.238642 3:+96155862 None:intergenic
AAAACTGTGCATGTGATTAA+AGG 0.246723 3:-96153759 MsG0380017425.01.T01:CDS
TGCAGATAGTTTGGGGAATA+TGG 0.248380 3:-96152266 MsG0380017425.01.T01:CDS
CCCTGGAGATGTGAGAGTTT+TGG 0.255345 3:-96153703 MsG0380017425.01.T01:CDS
AGGGATTTCTTCACCCATTT+AGG 0.262884 3:+96152322 None:intergenic
TATACGTGCTGCACAGCTTT+GGG 0.268746 3:-96153943 MsG0380017425.01.T01:CDS
GTGACAAGCTTGCCGGTCTT+TGG 0.290413 3:+96152853 None:intergenic
TAACCAGAGTGCAGATAGTT+TGG 0.293493 3:-96152275 MsG0380017425.01.T01:CDS
ATCTCATTCCACCAAGTAAA+AGG 0.298013 3:-96153545 MsG0380017425.01.T01:CDS
TCTAAGATGAGGTTCTGTTT+TGG 0.298450 3:+96153980 None:intergenic
CTCCTTTGGTTCAGGAAGTT+TGG 0.303073 3:+96155813 None:intergenic
ATTACATCCGACATCTTAAA+AGG 0.308564 3:+96155777 None:intergenic
GCTTGGAGAGGGTGCGATAA+AGG 0.313426 3:-96155711 MsG0380017425.01.T01:CDS
ATAAAATCAGGGTACAATTT+CGG 0.317109 3:+96152811 None:intergenic
CCCCATACCGATGAAGCTTC+TGG 0.320767 3:-96153612 MsG0380017425.01.T01:CDS
CTATTGGACAATTCAACTTC+TGG 0.328537 3:+96154884 None:intergenic
TTCCAAGGCCTTGGTCAGTT+TGG 0.329769 3:+96155324 None:intergenic
CAGTTCGCCTCCTTTGGTTC+AGG 0.334979 3:+96155805 None:intergenic
GCGGAATCTGTGGCACTCTT+TGG 0.335988 3:+96155290 None:intergenic
GAGCTTCAGTTCGCCTCCTT+TGG 0.336847 3:+96155799 None:intergenic
TGGCCAGTTAAGTGGATTAC+TGG 0.349347 3:-96152587 MsG0380017425.01.T01:CDS
TTTAATCACATGCACAGTTT+TGG 0.354175 3:+96153761 None:intergenic
TATATAATCACAAGCACAAC+AGG 0.355399 3:+96151940 None:intergenic
AAATCTTCTGAGGACTCTAT+TGG 0.356289 3:+96154868 None:intergenic
TTCTGATTTGGTGTCATACT+TGG 0.363196 3:-96156083 MsG0380017425.01.T01:CDS
AAAAGCTTCAGCCTGGTATC+AGG 0.363577 3:-96152356 MsG0380017425.01.T01:CDS
TATAACATTGCTTTCAGCTC+TGG 0.364623 3:-96154159 MsG0380017425.01.T01:CDS
TCATATAAATGATGCAAATC+CGG 0.365024 3:+96153666 None:intergenic
ATGTGCCTGATGAAATATTC+TGG 0.369937 3:-96154136 MsG0380017425.01.T01:CDS
CTCTGGTTATCTGAGGATTT+AGG 0.371599 3:+96152289 None:intergenic
TGCTCTTTCCCCATAAAATC+AGG 0.380317 3:+96152799 None:intergenic
ATCTATCAACATATCCGATC+TGG 0.381578 3:+96156056 None:intergenic
TAATTATTCCTCTCCACATC+AGG 0.389987 3:+96154439 None:intergenic
TGCTGCAGCATTTCCATGCT+CGG 0.390124 3:+96154028 None:intergenic
CGCCAGAGAATCAACTTGCT+TGG 0.391331 3:+96152159 None:intergenic
GCATCGTCCAATGGCTGCAC+TGG 0.393395 3:+96155384 None:intergenic
CTTGGAGAGGGTGCGATAAA+GGG 0.394122 3:-96155710 MsG0380017425.01.T01:CDS
TCCAAAACTCTCACATCTCC+AGG 0.394576 3:+96153702 None:intergenic
AAAACAGAACCTCATCTTAG+AGG 0.395146 3:-96153978 MsG0380017425.01.T01:CDS
AGGATTTAGGCTGCAAATCA+AGG 0.397850 3:+96152302 None:intergenic
AACCAGAGTGCAGATAGTTT+GGG 0.400197 3:-96152274 MsG0380017425.01.T01:CDS
ATTGGTAACATGGATTTAGA+AGG 0.405144 3:-96156175 MsG0380017425.01.T01:CDS
AACTTCTGGTGATATACAAT+AGG 0.405528 3:+96154898 None:intergenic
TGCCACAGATTCCGCTTAAC+CGG 0.405897 3:-96155282 MsG0380017425.01.T01:CDS
TGCCAAACTGACCAAGGCCT+TGG 0.407237 3:-96155326 MsG0380017425.01.T01:CDS
CTATACGTGCTGCACAGCTT+TGG 0.408240 3:-96153944 MsG0380017425.01.T01:CDS
CACCCTCGGCTTACCAGATC+AGG 0.409441 3:-96154339 MsG0380017425.01.T01:intron
CGGATGTAATCGTCGAAATT+GGG 0.412299 3:-96155764 MsG0380017425.01.T01:CDS
GACCCAGTAATCCACTTAAC+TGG 0.413096 3:+96152584 None:intergenic
TTGCTGTCCTTCATCCATAA+AGG 0.416690 3:+96154814 None:intergenic
TGATGTCAAAGCTTCTGATT+TGG 0.416967 3:-96156095 MsG0380017425.01.T01:CDS
TTCCAGAAGCTTCATCGGTA+TGG 0.418798 3:+96153610 None:intergenic
AAATCCTGGGGAGACTTTAC+CGG 0.419282 3:-96152753 MsG0380017425.01.T01:CDS
CTTCTGGAAGTGACCTTGAC+GGG 0.419615 3:-96153596 MsG0380017425.01.T01:CDS
ATGGGTGTCTTAGATGAGTT+GGG 0.422124 3:-96153873 MsG0380017425.01.T01:CDS
TTGTATGCAACTAGGCTTCA+AGG 0.422760 3:+96151857 None:intergenic
CATCGTCCAATGGCTGCACT+GGG 0.423171 3:+96155385 None:intergenic
GATACAGATCTTGAGGTTCC+AGG 0.425293 3:-96152658 MsG0380017425.01.T01:CDS
GACATGGGAACCCCAAAATC+AGG 0.430513 3:+96155238 None:intergenic
TAGCAGACTTTACTGTTGCT+TGG 0.431062 3:-96155728 MsG0380017425.01.T01:CDS
CAAGCAGCTCGATGATGTTA+TGG 0.431269 3:-96154954 MsG0380017425.01.T01:CDS
TTAAAACAGCATACCTGATC+TGG 0.433014 3:+96154326 None:intergenic
TTCATCAGGCAGATGGTTGA+TGG 0.434042 3:-96153892 MsG0380017425.01.T01:CDS
ATCCAAGGCACCGTGGTCAC+TGG 0.439119 3:+96152924 None:intergenic
ACAAAACAACTATAACCTTT+CGG 0.439679 3:+96152126 None:intergenic
TCCAGAAGCTTCATCGGTAT+GGG 0.443292 3:+96153611 None:intergenic
ACAGCGACCTGCAGCATTGA+GGG 0.444513 3:+96155887 None:intergenic
TTCAAGTTTAAATCAAATGC+TGG 0.444810 3:-96154093 MsG0380017425.01.T01:CDS
GAGCAGCCATTGACATCCTT+AGG 0.448688 3:+96155079 None:intergenic
AATCGTCGAAATTGGGACTT+TGG 0.450780 3:-96155757 MsG0380017425.01.T01:CDS
TGTTAGACGATGACGATCCT+TGG 0.452833 3:-96155429 MsG0380017425.01.T01:CDS
AACCAAGCAAGTTGATTCTC+TGG 0.456601 3:-96152161 MsG0380017425.01.T01:CDS
TTGGAGATCTGATAAAACTT+TGG 0.458570 3:+96154974 None:intergenic
CGGTTTCAAATTTGGAGGCA+TGG 0.459028 3:+96152831 None:intergenic
AGGCATGGTGACAAGCTTGC+CGG 0.462316 3:+96152846 None:intergenic
GCGTTCTCATTCAAAGGAAT+AGG 0.463285 3:-96155627 MsG0380017425.01.T01:intron
GATGGGTGTCTTAGATGAGT+TGG 0.465037 3:-96153874 MsG0380017425.01.T01:CDS
ATGATGTTATGGAGGTTAGA+AGG 0.468240 3:-96154943 MsG0380017425.01.T01:CDS
AGCATCAATATCTTTATCAT+AGG 0.469546 3:+96152717 None:intergenic
CAGGAAGCAAGGGGAACTTA+AGG 0.470518 3:-96152494 MsG0380017425.01.T01:CDS
CAAGGAAATTGTATGCAACT+AGG 0.471613 3:+96151849 None:intergenic
TAAAAGGAGCTGGCCACCTA+TGG 0.472637 3:-96153529 MsG0380017425.01.T01:CDS
AGAGTCACCTTTATGGATGA+AGG 0.474399 3:-96154821 MsG0380017425.01.T01:CDS
AGACTTGGTTAGAACATCAT+AGG 0.477387 3:+96154055 None:intergenic
TCCATGCTCGGCACAAGACT+TGG 0.477506 3:+96154040 None:intergenic
TACAAGTCCAAGAAAATCCT+GGG 0.484336 3:-96152766 MsG0380017425.01.T01:CDS
AGGGCCTCAGTGGCAGAATC+CGG 0.484936 3:+96155906 None:intergenic
GGCATTTAGTTAAGCTACTT+CGG 0.486033 3:-96152052 MsG0380017425.01.T01:three_prime_UTR
CTGAATTCATTGCTGATGCA+TGG 0.487390 3:-96152630 MsG0380017425.01.T01:CDS
TCTCAAATATTCCAAGGCCT+TGG 0.488512 3:+96155315 None:intergenic
ACTTTACTGTTGCTTGGAGA+GGG 0.492300 3:-96155722 MsG0380017425.01.T01:CDS
TTACAAGTCCAAGAAAATCC+TGG 0.493512 3:-96152767 MsG0380017425.01.T01:CDS
TTCCAGTGACCACGGTGCCT+TGG 0.494008 3:-96152926 MsG0380017425.01.T01:CDS
AAACATGGTGAATGAGCAGT+TGG 0.494708 3:-96152983 MsG0380017425.01.T01:CDS
GACTTTACTGTTGCTTGGAG+AGG 0.497044 3:-96155723 MsG0380017425.01.T01:CDS
ATACGTGCTGCACAGCTTTG+GGG 0.498277 3:-96153942 MsG0380017425.01.T01:CDS
AATTTCGGTTTCAAATTTGG+AGG 0.500673 3:+96152826 None:intergenic
CGATTCATCAATGTCGTCAT+CGG 0.501085 3:+96155465 None:intergenic
CGATGACGACATTGATGAAT+CGG 0.502511 3:-96155464 MsG0380017425.01.T01:CDS
CATATAAATGATGCAAATCC+GGG 0.503167 3:+96153667 None:intergenic
GAAAATTGTTTCTCAAAGCA+CGG 0.503553 3:-96153801 MsG0380017425.01.T01:CDS
CTCTTAGCTGCATCAACAGT+GGG 0.505949 3:+96155031 None:intergenic
ACTGAGGCCCTCAATGCTGC+AGG 0.506603 3:-96155894 MsG0380017425.01.T01:CDS
TTTGGAGGCAGTTGATGTCC+CGG 0.508098 3:-96153685 MsG0380017425.01.T01:CDS
ACCAAGTCTTGTGCCGAGCA+TGG 0.509711 3:-96154041 MsG0380017425.01.T01:CDS
GAGAAACTGAAATCAGATGT+TGG 0.509795 3:-96152418 MsG0380017425.01.T01:CDS
TCTTGGACTTGTAAGATTGG+TGG 0.510738 3:+96152776 None:intergenic
TGAAATATTCTGGAAAATGC+AGG 0.511110 3:-96154126 MsG0380017425.01.T01:CDS
GGTGACATATCATCCTAAAT+GGG 0.512232 3:-96152335 MsG0380017425.01.T01:CDS
TGACTTGCCGTGTTTGAAGC+CGG 0.512904 3:+96153487 None:intergenic
AACTTCTACTGATGCATATG+TGG 0.514055 3:+96154489 None:intergenic
TAAAGGTGACTCTCAAGAAT+CGG 0.516134 3:+96154831 None:intergenic
AAATACAACAGCAGGAAGCA+AGG 0.516510 3:-96152505 MsG0380017425.01.T01:CDS
TCTTATGATGGCCAGTTAAG+TGG 0.517243 3:-96152595 MsG0380017425.01.T01:CDS
TAGCTTAACTAAATGCCAAA+AGG 0.517549 3:+96152058 None:intergenic
CATAGGCATCTTTGATCCGC+CGG 0.519266 3:+96152734 None:intergenic
TCTTGAGCAGCGTACTCCAT+AGG 0.520309 3:+96153513 None:intergenic
GCTTCTGGAAGTGACCTTGA+CGG 0.524214 3:-96153597 MsG0380017425.01.T01:CDS
CATAACATCATCGAGCTGCT+TGG 0.524986 3:+96154955 None:intergenic
ATGCAGTCTCAAAACAAATG+AGG 0.525295 3:+96151995 None:intergenic
CCATGCCAAAATACAACAGC+AGG 0.526121 3:-96152513 MsG0380017425.01.T01:CDS
ATCGAGTTAACTTCATTCGC+AGG 0.527442 3:+96154466 None:intergenic
GCCAAAAGGAAAACTATTGA+CGG 0.527545 3:+96152072 None:intergenic
GCCTTGTCTTTGTGCAAGCA+AGG 0.528388 3:+96152209 None:intergenic
TGTATCATAAAGTATATCAC+TGG 0.528623 3:+96152675 None:intergenic
AATACAACAGCAGGAAGCAA+GGG 0.531370 3:-96152504 MsG0380017425.01.T01:CDS
AGGTAATCAACTGCAATCCA+TGG 0.532962 3:+96152229 None:intergenic
CACAGCGACCTGCAGCATTG+AGG 0.533208 3:+96155886 None:intergenic
TGCAGTCTCAAAACAAATGA+GGG 0.533989 3:+96151996 None:intergenic
GGGGCCTTAGAGAAAAGTCT+AGG 0.534750 3:-96153923 MsG0380017425.01.T01:CDS
AGCCATTGACATCCTTAGGT+TGG 0.535795 3:+96155083 None:intergenic
TGAATTCATTGCTGATGCAT+GGG 0.539017 3:-96152629 MsG0380017425.01.T01:CDS
ACGATGACGATCCTTGGATC+AGG 0.540545 3:-96155423 MsG0380017425.01.T01:CDS
ATGATATGTCACCTGATACC+AGG 0.541663 3:+96152345 None:intergenic
ACATCTCCAGGGTGAAGACA+TGG 0.547728 3:+96153714 None:intergenic
ACTTTATGATACAGATCTTG+AGG 0.548438 3:-96152665 MsG0380017425.01.T01:CDS
GTCACTTCCAGAAGCTTCAT+CGG 0.548890 3:+96153605 None:intergenic
TTCCACCAAGTAAAAGGAGC+TGG 0.550949 3:-96153539 MsG0380017425.01.T01:CDS
ATAATAATTGCATCGTCCAA+TGG 0.551053 3:+96155375 None:intergenic
TCTATCAACATATCCGATCT+GGG 0.552219 3:+96156057 None:intergenic
AAGTTGTCACTGGACAGATC+TGG 0.552829 3:-96152537 MsG0380017425.01.T01:CDS
ACAGAAGAAGAAGTTGTCAC+TGG 0.555849 3:-96152547 MsG0380017425.01.T01:CDS
GATACTGCGTTCTCATTCAA+AGG 0.556783 3:-96155633 MsG0380017425.01.T01:CDS
AACCAACCTAAGGATGTCAA+TGG 0.558276 3:-96155085 MsG0380017425.01.T01:CDS
AAGCAACAGTAAAGTCTGCT+AGG 0.559971 3:+96155730 None:intergenic
GAGCAAAAGTGCTCTTATGA+TGG 0.561154 3:-96152607 MsG0380017425.01.T01:CDS
GAAATTGGATAAGGCACCCT+CGG 0.562516 3:-96154353 MsG0380017425.01.T01:CDS
TCATCAGGCAGATGGTTGAT+GGG 0.562885 3:-96153891 MsG0380017425.01.T01:CDS
ATCTTAGGTGGCCGGTTAAG+CGG 0.563632 3:+96155271 None:intergenic
ATCCAAACTTCCTGAACCAA+AGG 0.566601 3:-96155815 MsG0380017425.01.T01:CDS
GGCCAGTTAAGTGGATTACT+GGG 0.566684 3:-96152586 MsG0380017425.01.T01:CDS
TCGTCCAATGGCTGCACTGG+GGG 0.568265 3:+96155387 None:intergenic
TTTACAGACTATTGGTAACA+TGG 0.568358 3:-96156185 None:intergenic
TAACTCGATGCTCCCTGATG+TGG 0.571432 3:-96154452 MsG0380017425.01.T01:CDS
CTTCTACATAGATTCTCAGA+AGG 0.573110 3:-96155206 MsG0380017425.01.T01:CDS
TTCAATTTGCAATGCACATG+TGG 0.576564 3:-96152959 MsG0380017425.01.T01:CDS
GCAATGAATTCAGAAGATCC+TGG 0.576900 3:+96152640 None:intergenic
AAGTCTGTGGTCCTGATCCA+AGG 0.580119 3:+96155412 None:intergenic
GCATGTGATTAAAGGTATAG+TGG 0.580421 3:-96153751 MsG0380017425.01.T01:CDS
TTGGCATCTCAAATATTCCA+AGG 0.582511 3:+96155309 None:intergenic
AAGAAAGCCGGCTTCAAACA+CGG 0.582659 3:-96153494 MsG0380017425.01.T01:CDS
GTCAGTTTGGCACCATGACG+AGG 0.585496 3:+96155337 None:intergenic
GGATTTAGGCTGCAAATCAA+GGG 0.587122 3:+96152303 None:intergenic
ACTACTCAAGTCAGCATAGG+TGG 0.591142 3:-96156127 MsG0380017425.01.T01:CDS
ACCTTGCTTGCACAAAGACA+AGG 0.591268 3:-96152210 MsG0380017425.01.T01:CDS
AACACGGCAAGTCACTGTCC+AGG 0.592541 3:-96153478 MsG0380017425.01.T01:intron
AAATACAGATGACTATAAGA+AGG 0.593973 3:-96155961 MsG0380017425.01.T01:CDS
AGTTGGGTGTGCTTGAACAA+GGG 0.595981 3:-96153857 MsG0380017425.01.T01:CDS
TACCTGATCTGGTAAGCCGA+GGG 0.596114 3:+96154337 None:intergenic
TTCTGGAAGTGACCTTGACG+GGG 0.599085 3:-96153595 MsG0380017425.01.T01:CDS
TTGGAGAGGGTGCGATAAAG+GGG 0.599761 3:-96155709 MsG0380017425.01.T01:intron
TGCAGCATTGAGGGCCTCAG+TGG 0.602446 3:+96155896 None:intergenic
CAAACTTCCTGAACCAAAGG+AGG 0.605862 3:-96155812 MsG0380017425.01.T01:CDS
AACATGGTGAATGAGCAGTT+GGG 0.605987 3:-96152982 MsG0380017425.01.T01:CDS
TCCGCCGGTAAAGTCTCCCC+AGG 0.607214 3:+96152749 None:intergenic
TCCCCAAACTATCTGCACTC+TGG 0.607611 3:+96152272 None:intergenic
GAGTTGGGTGTGCTTGAACA+AGG 0.608200 3:-96153858 MsG0380017425.01.T01:CDS
TCATGGTGCCAAACTGACCA+AGG 0.610706 3:-96155332 MsG0380017425.01.T01:CDS
AGTACGCTGCTCAAGAAAGC+CGG 0.612575 3:-96153506 MsG0380017425.01.T01:CDS
TGGCATTGGTATTATCACTA+CGG 0.612991 3:-96154404 MsG0380017425.01.T01:CDS
GGCCGGTTAAGCGGAATCTG+TGG 0.613390 3:+96155280 None:intergenic
CGATGCTCCCTGATGTGGAG+AGG 0.613907 3:-96154447 MsG0380017425.01.T01:CDS
TTTAGCATGCCTCTAAGATG+AGG 0.614456 3:+96153969 None:intergenic
AAACGTCTCTAAATCTTCTG+AGG 0.614717 3:+96154858 None:intergenic
TGTGCTTGATCATGGCCACA+AGG 0.615311 3:-96152106 MsG0380017425.01.T01:three_prime_UTR
CAAAATATAAATCCCCGTCA+AGG 0.617253 3:+96153583 None:intergenic
CCAGAAGCTTCATCGGTATG+GGG 0.618529 3:+96153612 None:intergenic
ATCTGCACTCTGGTTATCTG+AGG 0.620329 3:+96152282 None:intergenic
ATACCTGATCTGGTAAGCCG+AGG 0.622637 3:+96154336 None:intergenic
ACTACTACTCAAGTCAGCAT+AGG 0.622798 3:-96156130 MsG0380017425.01.T01:CDS
GTTTGGCACCATGACGAGGT+GGG 0.623401 3:+96155341 None:intergenic
GTAGAAGAAAGCATCTGACA+TGG 0.626387 3:+96155222 None:intergenic
ATATCAATCCCACCTCGTCA+TGG 0.629778 3:-96155349 MsG0380017425.01.T01:CDS
AATTATTCCTCTCCACATCA+GGG 0.631370 3:+96154440 None:intergenic
AAGGTGTTAAAGGTCATCAG+TGG 0.631956 3:-96155846 MsG0380017425.01.T01:CDS
GCTCTTTCCCCATAAAATCA+GGG 0.634409 3:+96152800 None:intergenic
TCTCTTAGCTGCATCAACAG+TGG 0.634684 3:+96155030 None:intergenic
TTTGCCGGATTCTGCCACTG+AGG 0.635566 3:-96155910 MsG0380017425.01.T01:CDS
CTTGCACAAAGACAAGGCAT+AGG 0.637653 3:-96152204 MsG0380017425.01.T01:CDS
TCATACTTGGAATCCCAGAT+CGG 0.638875 3:-96156070 MsG0380017425.01.T01:CDS
AGTTTGGCACCATGACGAGG+TGG 0.638890 3:+96155340 None:intergenic
GTGTACGCATTTCTCATCCA+AGG 0.639980 3:+96152909 None:intergenic
ATACAACAGCAGGAAGCAAG+GGG 0.641327 3:-96152503 MsG0380017425.01.T01:CDS
CCAAAACTCTCACATCTCCA+GGG 0.642004 3:+96153703 None:intergenic
ACCAGAGTGCAGATAGTTTG+GGG 0.642602 3:-96152273 MsG0380017425.01.T01:CDS
TAGAAGAAAGCATCTGACAT+GGG 0.646485 3:+96155223 None:intergenic
TCCTGGGGAGACTTTACCGG+CGG 0.647682 3:-96152750 MsG0380017425.01.T01:CDS
TACAGATGACTATAAGAAGG+TGG 0.647794 3:-96155958 MsG0380017425.01.T01:CDS
AATATTCTGGAAAATGCAGG+AGG 0.650815 3:-96154123 MsG0380017425.01.T01:CDS
CTGGACACACAGTTAAACTC+AGG 0.651025 3:+96152694 None:intergenic
CATGCTGATTCCAGTGACCA+CGG 0.651776 3:-96152934 MsG0380017425.01.T01:CDS
GTAAAATGCACAAAGGCATG+AGG 0.652023 3:+96155933 None:intergenic
AGGTGTTAAAGGTCATCAGT+GGG 0.654765 3:-96155845 MsG0380017425.01.T01:CDS
AGCAAGGGGAACTTAAGGAG+AGG 0.660167 3:-96152489 MsG0380017425.01.T01:CDS
GCAGCTCGATGATGTTATGG+AGG 0.660706 3:-96154951 MsG0380017425.01.T01:CDS
TGAGCAGCGTACTCCATAGG+TGG 0.664350 3:+96153516 None:intergenic
ACGGTGGCAGAGCGGCCTTG+TGG 0.668934 3:+96152091 None:intergenic
AACTATTGACGGTGGCAGAG+CGG 0.674993 3:+96152083 None:intergenic
ATCGTCCAATGGCTGCACTG+GGG 0.677981 3:+96155386 None:intergenic
CGGCAAAGTAAAATGCACAA+AGG 0.680210 3:+96155926 None:intergenic
TGGCGAAGTATCTATCCGAA+AGG 0.685075 3:-96152141 MsG0380017425.01.T01:CDS
GCAGCAATAATGTTAAGTTG+TGG 0.694899 3:-96154011 MsG0380017425.01.T01:CDS
AAAAGGAAAACTATTGACGG+TGG 0.705599 3:+96152075 None:intergenic
ATTAATGCAATTGTACACAG+AGG 0.713815 3:-96155157 MsG0380017425.01.T01:CDS
ATATTCTGGAAAATGCAGGA+GGG 0.714360 3:-96154122 MsG0380017425.01.T01:CDS
AATGCTGGTTGATCGAGACG+TGG 0.717407 3:-96154078 MsG0380017425.01.T01:CDS
ATATAATCACAAGCACAACA+GGG 0.736789 3:+96151941 None:intergenic
ACAAGTCCAAGAAAATCCTG+GGG 0.740505 3:-96152765 MsG0380017425.01.T01:CDS
ATTTCTCATCCAAGGCACCG+TGG 0.749956 3:+96152917 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTTGTATATGAATGTAAAT+GGG - Chr3:96154635-96154654 MsG0380017425.01.T01:intron 20.0%
!! TAAATGGGTAATAACAATAT+AGG - Chr3:96154650-96154669 MsG0380017425.01.T01:intron 20.0%
!! TGAAAAATTGAAATTGGATA+AGG - Chr3:96153677-96153696 MsG0380017425.01.T01:CDS 20.0%
!!! AATAATTATGTTTTCTCTGA+TGG - Chr3:96153615-96153634 MsG0380017425.01.T01:CDS 20.0%
!!! AGGCTAAAAATGAATATTTT+CGG + Chr3:96153384-96153403 None:intergenic 20.0%
!!! AGTGATAAAATGTGATTTTA+AGG - Chr3:96152444-96152463 MsG0380017425.01.T01:CDS 20.0%
!!! ATAAAATGTGATTTTAAGGT+GGG - Chr3:96152448-96152467 MsG0380017425.01.T01:CDS 20.0%
! AAATACAGATGACTATAAGA+AGG - Chr3:96152078-96152097 MsG0380017425.01.T01:three_prime_UTR 25.0%
! ACAAAACAACTATAACCTTT+CGG + Chr3:96155916-96155935 None:intergenic 25.0%
! ACGTAATAAAACAACAAGAT+GGG + Chr3:96152521-96152540 None:intergenic 25.0%
! AGAAGACGAGAATATATAAA+AGG - Chr3:96153320-96153339 MsG0380017425.01.T01:intron 25.0%
! AGCATCAATATCTTTATCAT+AGG + Chr3:96155325-96155344 None:intergenic 25.0%
! AGTTGCTGAAAAATTGAAAT+TGG - Chr3:96153671-96153690 MsG0380017425.01.T01:CDS 25.0%
! ATAAAATCAGGGTACAATTT+CGG + Chr3:96155231-96155250 None:intergenic 25.0%
! CATTCATATACAAAGCATAT+AGG + Chr3:96154630-96154649 None:intergenic 25.0%
! CTTGTGATGTTATAAGAAAT+TGG - Chr3:96153464-96153483 MsG0380017425.01.T01:intron 25.0%
! GAAGACGAGAATATATAAAA+GGG - Chr3:96153321-96153340 MsG0380017425.01.T01:intron 25.0%
! GATGTTATAAGAAATTGGAT+GGG - Chr3:96153469-96153488 MsG0380017425.01.T01:intron 25.0%
! GCTTTGTATATGAATGTAAA+TGG - Chr3:96154634-96154653 MsG0380017425.01.T01:intron 25.0%
! GTAAACATATTGCTAATCAA+AGG + Chr3:96154713-96154732 None:intergenic 25.0%
! TACAATTTCGGTTTCAAATT+TGG + Chr3:96155219-96155238 None:intergenic 25.0%
! TCATATAAATGATGCAAATC+CGG + Chr3:96154376-96154395 None:intergenic 25.0%
! TGATGTTATAAGAAATTGGA+TGG - Chr3:96153468-96153487 MsG0380017425.01.T01:intron 25.0%
! TGTATCATAAAGTATATCAC+TGG + Chr3:96155367-96155386 None:intergenic 25.0%
! TTAGCAATATGTTTACTACA+AGG - Chr3:96154717-96154736 MsG0380017425.01.T01:intron 25.0%
!! AAATTGTACCCTGATTTTAT+GGG - Chr3:96155231-96155250 MsG0380017425.01.T01:CDS 25.0%
!! ATACAAAATGAACCTGATTT+TGG - Chr3:96152789-96152808 MsG0380017425.01.T01:CDS 25.0%
!! ATTTTCCAGAATATTTCATC+AGG + Chr3:96153911-96153930 None:intergenic 25.0%
!! CGCATTAACTTGATTATATT+AGG - Chr3:96154806-96154825 MsG0380017425.01.T01:CDS 25.0%
!! TACAAAATGAACCTGATTTT+GGG - Chr3:96152790-96152809 MsG0380017425.01.T01:CDS 25.0%
!! TTCAAGTTTAAATCAAATGC+TGG - Chr3:96153946-96153965 MsG0380017425.01.T01:CDS 25.0%
!!! AGATTTTTTTGTCAGAAACA+TGG - Chr3:96155041-96155060 MsG0380017425.01.T01:CDS 25.0%
!!! GATAAAATGTGATTTTAAGG+TGG - Chr3:96152447-96152466 MsG0380017425.01.T01:CDS 25.0%
!!! GGATTTATATTTTGTCACTT+GGG - Chr3:96154465-96154484 MsG0380017425.01.T01:CDS 25.0%
AAAACTGTGCATGTGATTAA+AGG - Chr3:96154280-96154299 MsG0380017425.01.T01:intron 30.0%
AACTTCTGGTGATATACAAT+AGG + Chr3:96153144-96153163 None:intergenic 30.0%
AAGCATATAGGCATTAAGTA+TGG + Chr3:96154618-96154637 None:intergenic 30.0%
AATTTCGGTTTCAAATTTGG+AGG + Chr3:96155216-96155235 None:intergenic 30.0%
ACACCTTACCATTCAAAATT+AGG + Chr3:96152180-96152199 None:intergenic 30.0%
ACTTTATGATACAGATCTTG+AGG - Chr3:96155374-96155393 MsG0380017425.01.T01:CDS 30.0%
ATAATAATTGCATCGTCCAA+TGG + Chr3:96152667-96152686 None:intergenic 30.0%
ATATAATCACAAGCACAACA+GGG + Chr3:96156101-96156120 None:intergenic 30.0%
ATTAATGCAATTGTACACAG+AGG - Chr3:96152882-96152901 MsG0380017425.01.T01:CDS 30.0%
ATTACATCCGACATCTTAAA+AGG + Chr3:96152265-96152284 None:intergenic 30.0%
ATTCTTGATTAGAGACATAG+AGG - Chr3:96152471-96152490 MsG0380017425.01.T01:CDS 30.0%
CATATAAATGATGCAAATCC+GGG + Chr3:96154375-96154394 None:intergenic 30.0%
GAAAATTCACTACTGAAGTT+TGG + Chr3:96154949-96154968 None:intergenic 30.0%
GACGTAATAAAACAACAAGA+TGG + Chr3:96152522-96152541 None:intergenic 30.0%
GTATCAGTCATAGTAAATTC+TGG + Chr3:96152047-96152066 None:intergenic 30.0%
TAGCTTAACTAAATGCCAAA+AGG + Chr3:96155984-96156003 None:intergenic 30.0%
TATATAATCACAAGCACAAC+AGG + Chr3:96156102-96156121 None:intergenic 30.0%
TATATATTCTCGTCTTCTGT+GGG + Chr3:96153318-96153337 None:intergenic 30.0%
TTATAAGAAATTGGATGGGT+AGG - Chr3:96153473-96153492 MsG0380017425.01.T01:intron 30.0%
TTATATATTCTCGTCTTCTG+TGG + Chr3:96153319-96153338 None:intergenic 30.0%
TTGGAGATCTGATAAAACTT+TGG + Chr3:96153068-96153087 None:intergenic 30.0%
! AAATCCTAGACTTTTCTCTA+AGG + Chr3:96154123-96154142 None:intergenic 30.0%
! AATTGTACCCTGATTTTATG+GGG - Chr3:96155232-96155251 MsG0380017425.01.T01:CDS 30.0%
! ACAAAATGAACCTGATTTTG+GGG - Chr3:96152791-96152810 MsG0380017425.01.T01:CDS 30.0%
! ATCTTGCACATTTTGTCAAA+AGG + Chr3:96152373-96152392 None:intergenic 30.0%
! ATTGGTAACATGGATTTAGA+AGG - Chr3:96151864-96151883 MsG0380017425.01.T01:three_prime_UTR 30.0%
! GAAAATTGTTTCTCAAAGCA+CGG - Chr3:96154238-96154257 MsG0380017425.01.T01:intron 30.0%
! GAAATTGTACCCTGATTTTA+TGG - Chr3:96155230-96155249 MsG0380017425.01.T01:CDS 30.0%
! GATATACAATAGGCTTTTGT+TGG + Chr3:96153134-96153153 None:intergenic 30.0%
! GGGATTTATATTTTGTCACT+TGG - Chr3:96154464-96154483 MsG0380017425.01.T01:CDS 30.0%
! GTGCAAGATTTGTTTCAATA+GGG - Chr3:96152384-96152403 MsG0380017425.01.T01:CDS 30.0%
! TCAGGTTCATTTTGTATCTT+AGG + Chr3:96152786-96152805 None:intergenic 30.0%
! TCTTGCACATTTTGTCAAAA+GGG + Chr3:96152372-96152391 None:intergenic 30.0%
! TGAAATATTCTGGAAAATGC+AGG - Chr3:96153913-96153932 MsG0380017425.01.T01:CDS 30.0%
! TGACCTAATTTTGAATGGTA+AGG - Chr3:96152174-96152193 MsG0380017425.01.T01:CDS 30.0%
! TGTGCAAGATTTGTTTCAAT+AGG - Chr3:96152383-96152402 MsG0380017425.01.T01:CDS 30.0%
! TTTAATCACATGCACAGTTT+TGG + Chr3:96154281-96154300 None:intergenic 30.0%
! TTTGAATGGTAAGGTGTTAA+AGG - Chr3:96152183-96152202 MsG0380017425.01.T01:CDS 30.0%
! TTTTCTTGGACTTGTAAGAT+TGG + Chr3:96155269-96155288 None:intergenic 30.0%
!! CAGTGCTTTTAATTGTAATC+TGG - Chr3:96156075-96156094 MsG0380017425.01.T01:CDS 30.0%
!! GAGAAACAATTTTCAAGAGA+AGG + Chr3:96154232-96154251 None:intergenic 30.0%
!! TCTAAGTTGATTGGATGAAA+AGG + Chr3:96153404-96153423 None:intergenic 30.0%
!! TCTAGGATTTTTGTTTCATC+AGG - Chr3:96154133-96154152 MsG0380017425.01.T01:CDS 30.0%
!! TTATATTTTGTCACTTGGGA+TGG - Chr3:96154469-96154488 MsG0380017425.01.T01:CDS 30.0%
!!! ATCAGGTATGCTGTTTTAAA+GGG - Chr3:96153717-96153736 MsG0380017425.01.T01:CDS 30.0%
AAAACAGAACCTCATCTTAG+AGG - Chr3:96154061-96154080 MsG0380017425.01.T01:CDS 35.0%
AAAAGGAAAACTATTGACGG+TGG + Chr3:96155967-96155986 None:intergenic 35.0%
AAACGTCTCTAAATCTTCTG+AGG + Chr3:96153184-96153203 None:intergenic 35.0%
AACTTCTACTGATGCATATG+TGG + Chr3:96153553-96153572 None:intergenic 35.0%
AATTATTCCTCTCCACATCA+GGG + Chr3:96153602-96153621 None:intergenic 35.0%
AGGTGACATATCATCCTAAA+TGG - Chr3:96155703-96155722 MsG0380017425.01.T01:intron 35.0%
ATCTATCAACATATCCGATC+TGG + Chr3:96151986-96152005 None:intergenic 35.0%
ATCTCATTCCACCAAGTAAA+AGG - Chr3:96154494-96154513 MsG0380017425.01.T01:CDS 35.0%
ATGATGTTATGGAGGTTAGA+AGG - Chr3:96153096-96153115 MsG0380017425.01.T01:intron 35.0%
ATGCAGTCTCAAAACAAATG+AGG + Chr3:96156047-96156066 None:intergenic 35.0%
ATGTGCCTGATGAAATATTC+TGG - Chr3:96153903-96153922 MsG0380017425.01.T01:CDS 35.0%
ATTCTTGAGAGTCACCTTTA+TGG - Chr3:96153211-96153230 MsG0380017425.01.T01:intron 35.0%
ATTGCTGAAAAACCAACCTA+AGG - Chr3:96152944-96152963 MsG0380017425.01.T01:CDS 35.0%
CAAAATATAAATCCCCGTCA+AGG + Chr3:96154459-96154478 None:intergenic 35.0%
CTATTGGACAATTCAACTTC+TGG + Chr3:96153158-96153177 None:intergenic 35.0%
CTTCTACATAGATTCTCAGA+AGG - Chr3:96152833-96152852 MsG0380017425.01.T01:CDS 35.0%
GAGAAACTGAAATCAGATGT+TGG - Chr3:96155621-96155640 MsG0380017425.01.T01:intron 35.0%
GATGTGATTTCCTTCACAAT+GGG + Chr3:96153287-96153306 None:intergenic 35.0%
GCATACAATTTGAGTATGCT+AGG - Chr3:96154766-96154785 MsG0380017425.01.T01:intron 35.0%
GCCAAAAGGAAAACTATTGA+CGG + Chr3:96155970-96155989 None:intergenic 35.0%
GCTCAATCAGAAGAAATGTT+TGG + Chr3:96154748-96154767 None:intergenic 35.0%
GGCATTTAGTTAAGCTACTT+CGG - Chr3:96155987-96156006 MsG0380017425.01.T01:intron 35.0%
GGGATGTATCATCATATCTT+TGG + Chr3:96152501-96152520 None:intergenic 35.0%
GGTGACATATCATCCTAAAT+GGG - Chr3:96155704-96155723 MsG0380017425.01.T01:intron 35.0%
GTAAATTCTGGATATGACTC+CGG + Chr3:96152035-96152054 None:intergenic 35.0%
TAAAGGGGTAAACTTTCTTG+TGG - Chr3:96152345-96152364 MsG0380017425.01.T01:CDS 35.0%
TAAAGGTGACTCTCAAGAAT+CGG + Chr3:96153211-96153230 None:intergenic 35.0%
TAATTATTCCTCTCCACATC+AGG + Chr3:96153603-96153622 None:intergenic 35.0%
TACAAGTCCAAGAAAATCCT+GGG - Chr3:96155273-96155292 MsG0380017425.01.T01:CDS 35.0%
TACAGATGACTATAAGAAGG+TGG - Chr3:96152081-96152100 MsG0380017425.01.T01:three_prime_UTR 35.0%
TATAACATTGCTTTCAGCTC+TGG - Chr3:96153880-96153899 MsG0380017425.01.T01:CDS 35.0%
TCTATCAACATATCCGATCT+GGG + Chr3:96151985-96152004 None:intergenic 35.0%
TGAATTCATTGCTGATGCAT+GGG - Chr3:96155410-96155429 MsG0380017425.01.T01:CDS 35.0%
TGATGTCAAAGCTTCTGATT+TGG - Chr3:96151944-96151963 MsG0380017425.01.T01:three_prime_UTR 35.0%
TGATGTGATTTCCTTCACAA+TGG + Chr3:96153288-96153307 None:intergenic 35.0%
TGCAGTCTCAAAACAAATGA+GGG + Chr3:96156046-96156065 None:intergenic 35.0%
TTAAAACAGCATACCTGATC+TGG + Chr3:96153716-96153735 None:intergenic 35.0%
TTACAAGTCCAAGAAAATCC+TGG - Chr3:96155272-96155291 MsG0380017425.01.T01:CDS 35.0%
TTCAATTTGCAATGCACATG+TGG - Chr3:96155080-96155099 MsG0380017425.01.T01:CDS 35.0%
TTGGCATCTCAAATATTCCA+AGG + Chr3:96152733-96152752 None:intergenic 35.0%
! AAATCTTCTGAGGACTCTAT+TGG + Chr3:96153174-96153193 None:intergenic 35.0%
! AATATTCTGGAAAATGCAGG+AGG - Chr3:96153916-96153935 MsG0380017425.01.T01:CDS 35.0%
! ACCGTCAATAGTTTTCCTTT+TGG - Chr3:96155966-96155985 MsG0380017425.01.T01:CDS 35.0%
! AGACTTGGTTAGAACATCAT+AGG + Chr3:96153987-96154006 None:intergenic 35.0%
! ATATTCTGGAAAATGCAGGA+GGG - Chr3:96153917-96153936 MsG0380017425.01.T01:CDS 35.0%
! CTAAGATGAGGTTCTGTTTT+GGG + Chr3:96154061-96154080 None:intergenic 35.0%
! CTTTGTGCATTTTACTTTGC+CGG - Chr3:96152114-96152133 MsG0380017425.01.T01:three_prime_UTR 35.0%
! GATTGAAACTTGTTCATGCT+GGG + Chr3:96153794-96153813 None:intergenic 35.0%
! GATTTCTGAGCAACCATTTT+TGG + Chr3:96153046-96153065 None:intergenic 35.0%
! GCAGCAATAATGTTAAGTTG+TGG - Chr3:96154028-96154047 MsG0380017425.01.T01:CDS 35.0%
! GCATGTGATTAAAGGTATAG+TGG - Chr3:96154288-96154307 MsG0380017425.01.T01:intron 35.0%
! GGTTCATTTTGTATCTTAGG+TGG + Chr3:96152783-96152802 None:intergenic 35.0%
! TATGTTTTCTCTGATGGCAT+TGG - Chr3:96153621-96153640 MsG0380017425.01.T01:CDS 35.0%
! TTCAGGAAGTTTGGATTTTG+TGG + Chr3:96152220-96152239 None:intergenic 35.0%
!! AGAACGATCTCTAAGTTGAT+TGG + Chr3:96153413-96153432 None:intergenic 35.0%
!! AGTTGTTTTGTGCTTGATCA+TGG - Chr3:96155925-96155944 MsG0380017425.01.T01:CDS 35.0%
!! TAGAAGAAAGCATCTGACAT+GGG + Chr3:96152819-96152838 None:intergenic 35.0%
!! TCTAAGATGAGGTTCTGTTT+TGG + Chr3:96154062-96154081 None:intergenic 35.0%
!! TGGCATTGGTATTATCACTA+CGG - Chr3:96153635-96153654 MsG0380017425.01.T01:CDS 35.0%
!! TTCAACCTGGTTTTCTTAAC+AGG - Chr3:96153852-96153871 MsG0380017425.01.T01:CDS 35.0%
!! TTCTGATTTGGTGTCATACT+TGG - Chr3:96151956-96151975 MsG0380017425.01.T01:three_prime_UTR 35.0%
!! TTTTTGTTTCATCAGGCAGA+TGG - Chr3:96154140-96154159 MsG0380017425.01.T01:CDS 35.0%
!!! GATCAGGTATGCTGTTTTAA+AGG - Chr3:96153716-96153735 MsG0380017425.01.T01:CDS 35.0%
!!! TCAGGTATGCTGTTTTAAAG+GGG - Chr3:96153718-96153737 MsG0380017425.01.T01:CDS 35.0%
!!! TGAAGCTCCTTTTAAGATGT+CGG - Chr3:96152255-96152274 MsG0380017425.01.T01:CDS 35.0%
!!! TGTCTTGTTTTCCCTCAAAA+GGG - Chr3:96154397-96154416 MsG0380017425.01.T01:CDS 35.0%
!!! TTCTTTTTTCAGTGCACTGT+AGG + Chr3:96155586-96155605 None:intergenic 35.0%
AAAAATCCATGTCTTCACCC+TGG - Chr3:96154319-96154338 MsG0380017425.01.T01:intron 40.0%
AAAAGTAAAACCCGTCTTCC+AGG + Chr3:96153357-96153376 None:intergenic 40.0%
AAACATGGTGAATGAGCAGT+TGG - Chr3:96155056-96155075 MsG0380017425.01.T01:CDS 40.0%
AAATACAACAGCAGGAAGCA+AGG - Chr3:96155534-96155553 MsG0380017425.01.T01:intron 40.0%
AACATGGTGAATGAGCAGTT+GGG - Chr3:96155057-96155076 MsG0380017425.01.T01:CDS 40.0%
AACCAACCTAAGGATGTCAA+TGG - Chr3:96152954-96152973 MsG0380017425.01.T01:CDS 40.0%
AACCAGAGTGCAGATAGTTT+GGG - Chr3:96155765-96155784 MsG0380017425.01.T01:CDS 40.0%
AACTTAGAGATCGTTCTGCT+TGG - Chr3:96153416-96153435 MsG0380017425.01.T01:intron 40.0%
AAGCAACAGTAAAGTCTGCT+AGG + Chr3:96152312-96152331 None:intergenic 40.0%
AATACAACAGCAGGAAGCAA+GGG - Chr3:96155535-96155554 MsG0380017425.01.T01:intron 40.0%
AATCGTCGAAATTGGGACTT+TGG - Chr3:96152282-96152301 MsG0380017425.01.T01:CDS 40.0%
ACAAGTCCAAGAAAATCCTG+GGG - Chr3:96155274-96155293 MsG0380017425.01.T01:CDS 40.0%
ACAGAAGAAGAAGTTGTCAC+TGG - Chr3:96155492-96155511 MsG0380017425.01.T01:intron 40.0%
ACTACTACTCAAGTCAGCAT+AGG - Chr3:96151909-96151928 MsG0380017425.01.T01:three_prime_UTR 40.0%
AGAGTCACCTTTATGGATGA+AGG - Chr3:96153218-96153237 MsG0380017425.01.T01:intron 40.0%
AGGATTTAGGCTGCAAATCA+AGG + Chr3:96155740-96155759 None:intergenic 40.0%
AGGGATTTCTTCACCCATTT+AGG + Chr3:96155720-96155739 None:intergenic 40.0%
AGGTAATCAACTGCAATCCA+TGG + Chr3:96155813-96155832 None:intergenic 40.0%
AGGTGTTAAAGGTCATCAGT+GGG - Chr3:96152194-96152213 MsG0380017425.01.T01:CDS 40.0%
ATCCAAACTTCCTGAACCAA+AGG - Chr3:96152224-96152243 MsG0380017425.01.T01:CDS 40.0%
ATCGAGTTAACTTCATTCGC+AGG + Chr3:96153576-96153595 None:intergenic 40.0%
ATCTATAATGTCCTGCAGTG+TGG + Chr3:96155025-96155044 None:intergenic 40.0%
ATCTGCCTGTTAAGAAAACC+AGG + Chr3:96153860-96153879 None:intergenic 40.0%
ATGAACAAAAAGCTTCAGCC+TGG - Chr3:96155676-96155695 MsG0380017425.01.T01:intron 40.0%
ATGATATGTCACCTGATACC+AGG + Chr3:96155697-96155716 None:intergenic 40.0%
ATGGGTGTCTTAGATGAGTT+GGG - Chr3:96154166-96154185 MsG0380017425.01.T01:CDS 40.0%
CGATGACGACATTGATGAAT+CGG - Chr3:96152575-96152594 MsG0380017425.01.T01:CDS 40.0%
CGATTCATCAATGTCGTCAT+CGG + Chr3:96152577-96152596 None:intergenic 40.0%
CGGATGTAATCGTCGAAATT+GGG - Chr3:96152275-96152294 MsG0380017425.01.T01:CDS 40.0%
CGGCAAAGTAAAATGCACAA+AGG + Chr3:96152116-96152135 None:intergenic 40.0%
CTCTGGTTATCTGAGGATTT+AGG + Chr3:96155753-96155772 None:intergenic 40.0%
CTGAATTCATTGCTGATGCA+TGG - Chr3:96155409-96155428 MsG0380017425.01.T01:CDS 40.0%
GAAGAATGTTGCAAAGTGTG+CGG - Chr3:96153504-96153523 MsG0380017425.01.T01:CDS 40.0%
GACTAGAAGCAGTCCAAAAA+TGG - Chr3:96153030-96153049 MsG0380017425.01.T01:intron 40.0%
GATACTGCGTTCTCATTCAA+AGG - Chr3:96152406-96152425 MsG0380017425.01.T01:CDS 40.0%
GCAATGAATTCAGAAGATCC+TGG + Chr3:96155402-96155421 None:intergenic 40.0%
GCGTTCTCATTCAAAGGAAT+AGG - Chr3:96152412-96152431 MsG0380017425.01.T01:CDS 40.0%
GCTCTTTCCCCATAAAATCA+GGG + Chr3:96155242-96155261 None:intergenic 40.0%
GGATTTAGGCTGCAAATCAA+GGG + Chr3:96155739-96155758 None:intergenic 40.0%
TAAAAGGGTGAAGACAATCC+TGG - Chr3:96153336-96153355 MsG0380017425.01.T01:intron 40.0%
TAACCAGAGTGCAGATAGTT+TGG - Chr3:96155764-96155783 MsG0380017425.01.T01:CDS 40.0%
TAGCAGACTTTACTGTTGCT+TGG - Chr3:96152311-96152330 MsG0380017425.01.T01:CDS 40.0%
TCAATCCACTCATACTACCT+TGG - Chr3:96153808-96153827 MsG0380017425.01.T01:CDS 40.0%
TCATACTTGGAATCCCAGAT+CGG - Chr3:96151969-96151988 MsG0380017425.01.T01:three_prime_UTR 40.0%
TCGGATGTAATCGTCGAAAT+TGG - Chr3:96152274-96152293 MsG0380017425.01.T01:CDS 40.0%
TCTCAAATATTCCAAGGCCT+TGG + Chr3:96152727-96152746 None:intergenic 40.0%
TCTTATGATGGCCAGTTAAG+TGG - Chr3:96155444-96155463 MsG0380017425.01.T01:CDS 40.0%
TCTTGGACTTGTAAGATTGG+TGG + Chr3:96155266-96155285 None:intergenic 40.0%
TGCAGATAGTTTGGGGAATA+TGG - Chr3:96155773-96155792 MsG0380017425.01.T01:CDS 40.0%
TGCTCTTTCCCCATAAAATC+AGG + Chr3:96155243-96155262 None:intergenic 40.0%
TTATGTTGCTCCCATTGTGA+AGG - Chr3:96153274-96153293 MsG0380017425.01.T01:intron 40.0%
TTGCTGTCCTTCATCCATAA+AGG + Chr3:96153228-96153247 None:intergenic 40.0%
TTTATTCCATCCCCTTTAGC+AGG + Chr3:96153758-96153777 None:intergenic 40.0%
! AAGGTGTTAAAGGTCATCAG+TGG - Chr3:96152193-96152212 MsG0380017425.01.T01:CDS 40.0%
! ACATTCAAAAAGCACACACC+TGG + Chr3:96154582-96154601 None:intergenic 40.0%
! ACTTTACTGTTGCTTGGAGA+GGG - Chr3:96152317-96152336 MsG0380017425.01.T01:CDS 40.0%
! AGGGTGAAGACATGGATTTT+TGG + Chr3:96154320-96154339 None:intergenic 40.0%
! CATTTTGTATCTTAGGTGGC+CGG + Chr3:96152779-96152798 None:intergenic 40.0%
! CGCTGTGACCTAATTTTGAA+TGG - Chr3:96152169-96152188 MsG0380017425.01.T01:CDS 40.0%
! GGATTGAAACTTGTTCATGC+TGG + Chr3:96153795-96153814 None:intergenic 40.0%
! GTAAAATGCACAAAGGCATG+AGG + Chr3:96152109-96152128 None:intergenic 40.0%
! TGCTTCCTGCTGTTGTATTT+TGG + Chr3:96155534-96155553 None:intergenic 40.0%
!! AACCAAGCAAGTTGATTCTC+TGG - Chr3:96155878-96155897 MsG0380017425.01.T01:CDS 40.0%
!! GAAGACGGGTTTTACTTTTG+TGG - Chr3:96153358-96153377 MsG0380017425.01.T01:intron 40.0%
!! GAGCAAAAGTGCTCTTATGA+TGG - Chr3:96155432-96155451 MsG0380017425.01.T01:CDS 40.0%
!! GCAGTTGATTTTCCAAAGAC+CGG - Chr3:96155174-96155193 MsG0380017425.01.T01:CDS 40.0%
!! GTAGAAGAAAGCATCTGACA+TGG + Chr3:96152820-96152839 None:intergenic 40.0%
!! TGGTGATGTTGAGTTTTCCA+TGG - Chr3:96155793-96155812 MsG0380017425.01.T01:CDS 40.0%
!! TTTAGCATGCCTCTAAGATG+AGG + Chr3:96154073-96154092 None:intergenic 40.0%
!!! CTGTCTTGTTTTCCCTCAAA+AGG - Chr3:96154396-96154415 MsG0380017425.01.T01:CDS 40.0%
!!! TTCTGCTTGGTTTTTTGCTG+AGG - Chr3:96153429-96153448 MsG0380017425.01.T01:intron 40.0%
!!! TTGGTTTTTTGCTGAGGACA+AGG - Chr3:96153435-96153454 MsG0380017425.01.T01:intron 40.0%
AAAAGCTTCAGCCTGGTATC+AGG - Chr3:96155683-96155702 MsG0380017425.01.T01:intron 45.0%
AAATCCTGGGGAGACTTTAC+CGG - Chr3:96155286-96155305 MsG0380017425.01.T01:CDS 45.0%
AAGTTGTCACTGGACAGATC+TGG - Chr3:96155502-96155521 MsG0380017425.01.T01:intron 45.0%
AATTCTGGATATGACTCCGG+AGG + Chr3:96152032-96152051 None:intergenic 45.0%
ACCAGAGTGCAGATAGTTTG+GGG - Chr3:96155766-96155785 MsG0380017425.01.T01:CDS 45.0%
ACCTTGCTTGCACAAAGACA+AGG - Chr3:96155829-96155848 MsG0380017425.01.T01:CDS 45.0%
ACTACTCAAGTCAGCATAGG+TGG - Chr3:96151912-96151931 MsG0380017425.01.T01:three_prime_UTR 45.0%
AGCCATTGACATCCTTAGGT+TGG + Chr3:96152959-96152978 None:intergenic 45.0%
AGTTGGGTGTGCTTGAACAA+GGG - Chr3:96154182-96154201 MsG0380017425.01.T01:intron 45.0%
ATACAACAGCAGGAAGCAAG+GGG - Chr3:96155536-96155555 MsG0380017425.01.T01:intron 45.0%
ATATCAATCCCACCTCGTCA+TGG - Chr3:96152690-96152709 MsG0380017425.01.T01:CDS 45.0%
ATATTCTCGTCTTCTGTGGG+AGG + Chr3:96153315-96153334 None:intergenic 45.0%
ATCTGCACTCTGGTTATCTG+AGG + Chr3:96155760-96155779 None:intergenic 45.0%
CAAACTTCCTGAACCAAAGG+AGG - Chr3:96152227-96152246 MsG0380017425.01.T01:CDS 45.0%
CAAGCAGCTCGATGATGTTA+TGG - Chr3:96153085-96153104 MsG0380017425.01.T01:intron 45.0%
CATAACATCATCGAGCTGCT+TGG + Chr3:96153087-96153106 None:intergenic 45.0%
CCAAAACTCTCACATCTCCA+GGG + Chr3:96154339-96154358 None:intergenic 45.0%
CCATGCCAAAATACAACAGC+AGG - Chr3:96155526-96155545 MsG0380017425.01.T01:intron 45.0%
CGGTTTCAAATTTGGAGGCA+TGG + Chr3:96155211-96155230 None:intergenic 45.0%
CTCTTAGCTGCATCAACAGT+GGG + Chr3:96153011-96153030 None:intergenic 45.0%
CTGGACACACAGTTAAACTC+AGG + Chr3:96155348-96155367 None:intergenic 45.0%
CTTGCACAAAGACAAGGCAT+AGG - Chr3:96155835-96155854 MsG0380017425.01.T01:CDS 45.0%
GAAGACTTCTTGTACTCCTC+CGG - Chr3:96152013-96152032 MsG0380017425.01.T01:three_prime_UTR 45.0%
GACCCAGTAATCCACTTAAC+TGG + Chr3:96155458-96155477 None:intergenic 45.0%
GATACAGATCTTGAGGTTCC+AGG - Chr3:96155381-96155400 MsG0380017425.01.T01:CDS 45.0%
GATCTCCAAGGTAGTATGAG+TGG + Chr3:96153816-96153835 None:intergenic 45.0%
GATGGGTGTCTTAGATGAGT+TGG - Chr3:96154165-96154184 MsG0380017425.01.T01:CDS 45.0%
GTCACTTCCAGAAGCTTCAT+CGG + Chr3:96154437-96154456 None:intergenic 45.0%
GTGAAGACAATCCTGGAAGA+CGG - Chr3:96153343-96153362 MsG0380017425.01.T01:intron 45.0%
GTGTACGCATTTCTCATCCA+AGG + Chr3:96155133-96155152 None:intergenic 45.0%
TATACGTGCTGCACAGCTTT+GGG - Chr3:96154096-96154115 MsG0380017425.01.T01:CDS 45.0%
TCATCAGGCAGATGGTTGAT+GGG - Chr3:96154148-96154167 MsG0380017425.01.T01:CDS 45.0%
TCCAAAACTCTCACATCTCC+AGG + Chr3:96154340-96154359 None:intergenic 45.0%
TCCAGAAGCTTCATCGGTAT+GGG + Chr3:96154431-96154450 None:intergenic 45.0%
TCTCTTAGCTGCATCAACAG+TGG + Chr3:96153012-96153031 None:intergenic 45.0%
TGAAGACAATCCTGGAAGAC+GGG - Chr3:96153344-96153363 MsG0380017425.01.T01:intron 45.0%
TGTTAGACGATGACGATCCT+TGG - Chr3:96152610-96152629 MsG0380017425.01.T01:CDS 45.0%
TTAAAGGGGTTGTAGCCTGT+TGG - Chr3:96153732-96153751 MsG0380017425.01.T01:CDS 45.0%
TTCATCAGGCAGATGGTTGA+TGG - Chr3:96154147-96154166 MsG0380017425.01.T01:CDS 45.0%
TTCCACCAAGTAAAAGGAGC+TGG - Chr3:96154500-96154519 MsG0380017425.01.T01:CDS 45.0%
TTCCAGAAGCTTCATCGGTA+TGG + Chr3:96154432-96154451 None:intergenic 45.0%
! AAGAAAGCCGGCTTCAAACA+CGG - Chr3:96154545-96154564 MsG0380017425.01.T01:intron 45.0%
! AAGTCTCCCCAGGATTTTCT+TGG + Chr3:96155283-96155302 None:intergenic 45.0%
! CTCCTTTGGTTCAGGAAGTT+TGG + Chr3:96152229-96152248 None:intergenic 45.0%
! GAAATTGGATAAGGCACCCT+CGG - Chr3:96153686-96153705 MsG0380017425.01.T01:CDS 45.0%
! GACTTTACTGTTGCTTGGAG+AGG - Chr3:96152316-96152335 MsG0380017425.01.T01:CDS 45.0%
! TGGCGAAGTATCTATCCGAA+AGG - Chr3:96155898-96155917 MsG0380017425.01.T01:CDS 45.0%
! TGTTTTGTCTTCCACACTGC+AGG - Chr3:96155011-96155030 MsG0380017425.01.T01:CDS 45.0%
!! GGCCAGTTAAGTGGATTACT+GGG - Chr3:96155453-96155472 MsG0380017425.01.T01:CDS 45.0%
!! TGGAGATGTGAGAGTTTTGG+AGG - Chr3:96154339-96154358 MsG0380017425.01.T01:intron 45.0%
!! TGGCCAGTTAAGTGGATTAC+TGG - Chr3:96155452-96155471 MsG0380017425.01.T01:CDS 45.0%
!!! CCTGCTGTTGTATTTTGGCA+TGG + Chr3:96155529-96155548 None:intergenic 45.0%
AACTATTGACGGTGGCAGAG+CGG + Chr3:96155959-96155978 None:intergenic 50.0%
AAGTCTGTGGTCCTGATCCA+AGG + Chr3:96152630-96152649 None:intergenic 50.0%
ACATCTCCAGGGTGAAGACA+TGG + Chr3:96154328-96154347 None:intergenic 50.0%
ACGATGACGATCCTTGGATC+AGG - Chr3:96152616-96152635 MsG0380017425.01.T01:CDS 50.0%
AGCAAGGGGAACTTAAGGAG+AGG - Chr3:96155550-96155569 MsG0380017425.01.T01:intron 50.0%
AGTACGCTGCTCAAGAAAGC+CGG - Chr3:96154533-96154552 MsG0380017425.01.T01:intron 50.0%
ATACCTGATCTGGTAAGCCG+AGG + Chr3:96153706-96153725 None:intergenic 50.0%
ATACGTGCTGCACAGCTTTG+GGG - Chr3:96154097-96154116 MsG0380017425.01.T01:CDS 50.0%
ATCTTAGGTGGCCGGTTAAG+CGG + Chr3:96152771-96152790 None:intergenic 50.0%
ATGTTGCAAAGTGTGCGGCT+AGG - Chr3:96153509-96153528 MsG0380017425.01.T01:CDS 50.0%
CAGGAAGCAAGGGGAACTTA+AGG - Chr3:96155545-96155564 MsG0380017425.01.T01:intron 50.0%
CATAGGCATCTTTGATCCGC+CGG + Chr3:96155308-96155327 None:intergenic 50.0%
CCAGAAGCTTCATCGGTATG+GGG + Chr3:96154430-96154449 None:intergenic 50.0%
CTAGCTTCATCACCGTTGGT+TGG - Chr3:96152541-96152560 MsG0380017425.01.T01:CDS 50.0%
CTATACGTGCTGCACAGCTT+TGG - Chr3:96154095-96154114 MsG0380017425.01.T01:CDS 50.0%
GACATGGGAACCCCAAAATC+AGG + Chr3:96152804-96152823 None:intergenic 50.0%
GAGCAGCCATTGACATCCTT+AGG + Chr3:96152963-96152982 None:intergenic 50.0%
GAGTTGGGTGTGCTTGAACA+AGG - Chr3:96154181-96154200 MsG0380017425.01.T01:intron 50.0%
GCAGCTCGATGATGTTATGG+AGG - Chr3:96153088-96153107 MsG0380017425.01.T01:intron 50.0%
GCCTTGTCTTTGTGCAAGCA+AGG + Chr3:96155833-96155852 None:intergenic 50.0%
GGCAGTTCTGTACCAACCAA+CGG + Chr3:96152556-96152575 None:intergenic 50.0%
GGGGCCTTAGAGAAAAGTCT+AGG - Chr3:96154116-96154135 MsG0380017425.01.T01:CDS 50.0%
TAAAAGGAGCTGGCCACCTA+TGG - Chr3:96154510-96154529 MsG0380017425.01.T01:CDS 50.0%
TAACTCGATGCTCCCTGATG+TGG - Chr3:96153587-96153606 MsG0380017425.01.T01:CDS 50.0%
TACCTGATCTGGTAAGCCGA+GGG + Chr3:96153705-96153724 None:intergenic 50.0%
TCCCCAAACTATCTGCACTC+TGG + Chr3:96155770-96155789 None:intergenic 50.0%
TCTTGAGCAGCGTACTCCAT+AGG + Chr3:96154529-96154548 None:intergenic 50.0%
TGCCACAGATTCCGCTTAAC+CGG - Chr3:96152757-96152776 MsG0380017425.01.T01:CDS 50.0%
TGCTGCAGCATTTCCATGCT+CGG + Chr3:96154014-96154033 None:intergenic 50.0%
TGTGCTTGATCATGGCCACA+AGG - Chr3:96155933-96155952 MsG0380017425.01.T01:CDS 50.0%
TTCCAAGGCCTTGGTCAGTT+TGG + Chr3:96152718-96152737 None:intergenic 50.0%
! AATGCTGGTTGATCGAGACG+TGG - Chr3:96153961-96153980 MsG0380017425.01.T01:CDS 50.0%
! ACCAGGTTGAAACCTAGTCC+AGG + Chr3:96153843-96153862 None:intergenic 50.0%
! ACGTCTAGCTTCATCACCGT+TGG - Chr3:96152537-96152556 MsG0380017425.01.T01:CDS 50.0%
! CCCTGGAGATGTGAGAGTTT+TGG - Chr3:96154336-96154355 MsG0380017425.01.T01:intron 50.0%
! CGCCAGAGAATCAACTTGCT+TGG + Chr3:96155883-96155902 None:intergenic 50.0%
! CTTCTGGAAGTGACCTTGAC+GGG - Chr3:96154443-96154462 MsG0380017425.01.T01:CDS 50.0%
! CTTGGAGAGGGTGCGATAAA+GGG - Chr3:96152329-96152348 MsG0380017425.01.T01:CDS 50.0%
! GCTTCTGGAAGTGACCTTGA+CGG - Chr3:96154442-96154461 MsG0380017425.01.T01:CDS 50.0%
! GGGGTCTATCACCCTTTTGA+GGG + Chr3:96154411-96154430 None:intergenic 50.0%
! TAGCCTGTTGGCCTGCTAAA+GGG - Chr3:96153744-96153763 MsG0380017425.01.T01:CDS 50.0%
! TCATGGTGCCAAACTGACCA+AGG - Chr3:96152707-96152726 MsG0380017425.01.T01:CDS 50.0%
! TGACTTGCCGTGTTTGAAGC+CGG + Chr3:96154555-96154574 None:intergenic 50.0%
! TGGGGTCTATCACCCTTTTG+AGG + Chr3:96154412-96154431 None:intergenic 50.0%
! TTCTGGAAGTGACCTTGACG+GGG - Chr3:96154444-96154463 MsG0380017425.01.T01:CDS 50.0%
! TTGGAGAGGGTGCGATAAAG+GGG - Chr3:96152330-96152349 MsG0380017425.01.T01:CDS 50.0%
! TTTGGAGGCAGTTGATGTCC+CGG - Chr3:96154354-96154373 MsG0380017425.01.T01:CDS 50.0%
!! ATTTCTCATCCAAGGCACCG+TGG + Chr3:96155125-96155144 None:intergenic 50.0%
!! CATGCTGATTCCAGTGACCA+CGG - Chr3:96155105-96155124 MsG0380017425.01.T01:CDS 50.0%
AACACGGCAAGTCACTGTCC+AGG - Chr3:96154561-96154580 MsG0380017425.01.T01:intron 55.0%
AGGCATGGTGACAAGCTTGC+CGG + Chr3:96155196-96155215 None:intergenic 55.0%
AGTCCAGGCACAGATCTCCA+AGG + Chr3:96153828-96153847 None:intergenic 55.0%
AGTTTGGCACCATGACGAGG+TGG + Chr3:96152702-96152721 None:intergenic 55.0%
ATCCCCTTTAGCAGGCCAAC+AGG + Chr3:96153750-96153769 None:intergenic 55.0%
ATCGTCCAATGGCTGCACTG+GGG + Chr3:96152656-96152675 None:intergenic 55.0%
CATCGTCCAATGGCTGCACT+GGG + Chr3:96152657-96152676 None:intergenic 55.0%
CCCCATACCGATGAAGCTTC+TGG - Chr3:96154427-96154446 MsG0380017425.01.T01:CDS 55.0%
CTACCTTGGAGATCTGTGCC+TGG - Chr3:96153822-96153841 MsG0380017425.01.T01:CDS 55.0%
GAGCTTCAGTTCGCCTCCTT+TGG + Chr3:96152243-96152262 None:intergenic 55.0%
GCAAAGTGTGCGGCTAGGAT+GGG - Chr3:96153514-96153533 MsG0380017425.01.T01:CDS 55.0%
GCGGAATCTGTGGCACTCTT+TGG + Chr3:96152752-96152771 None:intergenic 55.0%
GTCAGTTTGGCACCATGACG+AGG + Chr3:96152705-96152724 None:intergenic 55.0%
GTGACAAGCTTGCCGGTCTT+TGG + Chr3:96155189-96155208 None:intergenic 55.0%
GTTTGGCACCATGACGAGGT+GGG + Chr3:96152701-96152720 None:intergenic 55.0%
TCCATGCTCGGCACAAGACT+TGG + Chr3:96154002-96154021 None:intergenic 55.0%
TGAGCAGCGTACTCCATAGG+TGG + Chr3:96154526-96154545 None:intergenic 55.0%
TGCAAAGTGTGCGGCTAGGA+TGG - Chr3:96153513-96153532 MsG0380017425.01.T01:CDS 55.0%
TGCACTGGGGGTAAAGTCTG+TGG + Chr3:96152643-96152662 None:intergenic 55.0%
TGCCAAACTGACCAAGGCCT+TGG - Chr3:96152713-96152732 MsG0380017425.01.T01:CDS 55.0%
TGGAGATCTGTGCCTGGACT+AGG - Chr3:96153828-96153847 MsG0380017425.01.T01:CDS 55.0%
TTTACCCCCAGTGCAGCCAT+TGG - Chr3:96152648-96152667 MsG0380017425.01.T01:CDS 55.0%
TTTGCCGGATTCTGCCACTG+AGG - Chr3:96152129-96152148 MsG0380017425.01.T01:exon 55.0%
! ACAGCGACCTGCAGCATTGA+GGG + Chr3:96152155-96152174 None:intergenic 55.0%
! ACCAAGTCTTGTGCCGAGCA+TGG - Chr3:96153998-96154017 MsG0380017425.01.T01:CDS 55.0%
! AGCCTGTTGGCCTGCTAAAG+GGG - Chr3:96153745-96153764 MsG0380017425.01.T01:CDS 55.0%
! CAGTTCGCCTCCTTTGGTTC+AGG + Chr3:96152237-96152256 None:intergenic 55.0%
! GCCTGGACTAGGTTTCAACC+TGG - Chr3:96153839-96153858 MsG0380017425.01.T01:CDS 55.0%
! GCTTGGAGAGGGTGCGATAA+AGG - Chr3:96152328-96152347 MsG0380017425.01.T01:CDS 55.0%
! GGCCAGCTCCTTTTACTTGG+TGG + Chr3:96154505-96154524 None:intergenic 55.0%
! GGTGGCCAGCTCCTTTTACT+TGG + Chr3:96154508-96154527 None:intergenic 55.0%
! GTAGCCTGTTGGCCTGCTAA+AGG - Chr3:96153743-96153762 MsG0380017425.01.T01:CDS 55.0%
! TGTTGGCCTGCTAAAGGGGA+TGG - Chr3:96153749-96153768 MsG0380017425.01.T01:CDS 55.0%
ACTGAGGCCCTCAATGCTGC+AGG - Chr3:96152145-96152164 MsG0380017425.01.T01:CDS 60.0%
AGGGCCTCAGTGGCAGAATC+CGG + Chr3:96152136-96152155 None:intergenic 60.0%
CACAGCGACCTGCAGCATTG+AGG + Chr3:96152156-96152175 None:intergenic 60.0%
CACCCTCGGCTTACCAGATC+AGG - Chr3:96153700-96153719 MsG0380017425.01.T01:CDS 60.0%
CGATGCTCCCTGATGTGGAG+AGG - Chr3:96153592-96153611 MsG0380017425.01.T01:CDS 60.0%
GCATCGTCCAATGGCTGCAC+TGG + Chr3:96152658-96152677 None:intergenic 60.0%
GGCCGGTTAAGCGGAATCTG+TGG + Chr3:96152762-96152781 None:intergenic 60.0%
TCCTGGGGAGACTTTACCGG+CGG - Chr3:96155289-96155308 MsG0380017425.01.T01:CDS 60.0%
TCGTCCAATGGCTGCACTGG+GGG + Chr3:96152655-96152674 None:intergenic 60.0%
TTCCAGTGACCACGGTGCCT+TGG - Chr3:96155113-96155132 MsG0380017425.01.T01:CDS 60.0%
! TGCAGCATTGAGGGCCTCAG+TGG + Chr3:96152146-96152165 None:intergenic 60.0%
!! ATCCAAGGCACCGTGGTCAC+TGG + Chr3:96155118-96155137 None:intergenic 60.0%
TCCGCCGGTAAAGTCTCCCC+AGG + Chr3:96155293-96155312 None:intergenic 65.0%
ACGGTGGCAGAGCGGCCTTG+TGG + Chr3:96155951-96155970 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 96151861 96156200 96151861 ID=MsG0380017425.01;Name=MsG0380017425.01
Chr3 mRNA 96151861 96156200 96151861 ID=MsG0380017425.01.T01;Parent=MsG0380017425.01;Name=MsG0380017425.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0.16|0.14|1|1|1|7|274|988
Chr3 exon 96151861 96153028 96151861 ID=MsG0380017425.01.T01:exon:17449;Parent=MsG0380017425.01.T01
Chr3 exon 96153479 96154187 96153479 ID=MsG0380017425.01.T01:exon:17448;Parent=MsG0380017425.01.T01
Chr3 exon 96154340 96154530 96154340 ID=MsG0380017425.01.T01:exon:17447;Parent=MsG0380017425.01.T01
Chr3 exon 96154772 96155492 96154772 ID=MsG0380017425.01.T01:exon:17446;Parent=MsG0380017425.01.T01
Chr3 exon 96155628 96155656 96155628 ID=MsG0380017425.01.T01:exon:17445;Parent=MsG0380017425.01.T01
Chr3 exon 96155710 96155987 96155710 ID=MsG0380017425.01.T01:exon:17444;Parent=MsG0380017425.01.T01
Chr3 exon 96156056 96156200 96156056 ID=MsG0380017425.01.T01:exon:17443;Parent=MsG0380017425.01.T01
Chr3 CDS 96156056 96156200 96156056 ID=MsG0380017425.01.T01:cds;Parent=MsG0380017425.01.T01
Chr3 CDS 96155710 96155987 96155710 ID=MsG0380017425.01.T01:cds;Parent=MsG0380017425.01.T01
Chr3 CDS 96155628 96155656 96155628 ID=MsG0380017425.01.T01:cds;Parent=MsG0380017425.01.T01
Chr3 CDS 96154772 96155492 96154772 ID=MsG0380017425.01.T01:cds;Parent=MsG0380017425.01.T01
Chr3 CDS 96154340 96154530 96154340 ID=MsG0380017425.01.T01:cds;Parent=MsG0380017425.01.T01
Chr3 CDS 96153479 96154187 96153479 ID=MsG0380017425.01.T01:cds;Parent=MsG0380017425.01.T01
Chr3 CDS 96152135 96153028 96152135 ID=MsG0380017425.01.T01:cds;Parent=MsG0380017425.01.T01
Chr3 three_prime_UTR 96151861 96152134 96151861 ID=MsG0380017425.01.T01:three_prime_utr;Parent=MsG0380017425.01.T01
Gene Sequence

>MsG0380017425.01.T01

ACTATTGGTAACATGGATTTAGAAGGAACTGTAAAAGATTCAGTGCTTACTACTACTCAAGTCAGCATAGGTGGATTTGACTCTGATGTCAAAGCTTCTGATTTGGTGTCATACTTGGAATCCCAGATCGGATATGTTGATAGATATAGAAATACAGATGACTATAAGAAGGTGGCGCCTCATGCCTTTGTGCATTTTACTTTGCCGGATTCTGCCACTGAGGCCCTCAATGCTGCAGGTCGCTGTGACCTAATTTTGAATGGTAAGGTGTTAAAGGTCATCAGTGGGCCACAAAATCCAAACTTCCTGAACCAAAGGAGGCGAACTGAAGCTCCTTTTAAGATGTCGGATGTAATCGTCGAAATTGGGACTTTGGTTAGCCTAGCAGACTTTACTGTTGCTTGGAGAGGGTGCGATAAAGGGGGATACTGCGTTCTCATTCAAAGGAATAGAACTGCCGATGACGACATTGATGAATCGGTCATAATTGATTTGTTAGACGATGACGATCCTTGGATCAGGACCACAGACTTTACCCCCAGTGCAGCCATTGGACGATGCAATTATTATAGAATATCAATCCCACCTCGTCATGGTGCCAAACTGACCAAGGCCTTGGAATATTTGAGATGCCAAAGAGTGCCACAGATTCCGCTTAACCGGCCACCTAAGATACAAAATGAACCTGATTTTGGGGTTCCCATGTCAGATGCTTTCTTCTACATAGATTCTCAGAAGGACATTTCTTTTGATATAATGTTCTTGATTAATGCAATTGTACACAGAGGAATATTCAATCAGTATAGTTTATCAAACAAGTTTTTTGAATTGCTGAAAAACCAACCTAAGGATGTCAATGGCTGCTCTGAAGCACATATGTACTTACAAGCACCCACTGTTGATGCAGCTAAGAGACTAGAAGCAGTCCAAAAATGGTTGCTCAGAAATCCAAAGTTTTATCAGATCTCCAAGCAGCTCGATGATGTTATGGAGGTTAGAAGGCTAGTTGTTACTCCAACAAAAGCCTATTGTATATCACCAGAAGTTGAATTGTCCAATAGAGTCCTCAGAAGATTTAGAGACGTTTCAGACCGATTCTTGAGAGTCACCTTTATGGATGAAGGACAGCAAACACTTAATAATTATGCTCTTAACTATTATGTTGCTCCCATTGATGGGCAATGCTTCTCATCCACATATGCATCAGTAGAAGTTCCTGCGAATGAAGTTAACTCGATGCTCCCTGATGTGGAGAGGAATAATTATGTTTTCTCTGATGGCATTGGTATTATCACTACGGATCTTGCAGTTGAAGTTGCTGAAAAATTGAAATTGGATAAGGCACCCTCGGCTTACCAGATCAGGCAGATTATAACATTGCTTTCAGCTCTGGATGTGCCTGATGAAATATTCTGGAAAATGCAGGAGGGAATGCTTTCAAGTTTAAATCAAATGCTGGTTGATCGAGACGTGGCCTATGATGTTCTAACCAAGTCTTGTGCCGAGCATGGAAATGCTGCAGCAATAATGTTAAGTTGTGGCTTCAGTCCCAAAACAGAACCTCATCTTAGAGGCATGCTAAACTCTATACGTGCTGCACAGCTTTGGGGCCTTAGAGAAAAGTCTAGGATTTTTGTTTCATCAGGCAGATGGTTGATGGGTGTCTTAGATGAGTTGGGTGTGCTTGAACAAGGGCAATGCTTTGTTCAAGTGTCTACTCCTTCTCTTGAAAATTGTTTCTCAAAGCACGGCTCAAGATTTTCAGAGACCAAAACTGTGCATGTGATTAAAGGTATAGTGGTTATAGCCAAAAATCCATGTCTTCACCCTGGAGATGTGAGAGTTTTGGAGGCAGTTGATGTCCCGGATTTGCATCATTTATATGACTGTCTTGTTTTCCCTCAAAAGGGTGATAGACCCCATACCGATGAAGCTTCTGGAAGTGACCTTGACGGGGATTTATATTTTGTCACTTGGGATGGAAATCTCATTCCACCAAGTAAAAGGAGCTGGCCACCTATGGAGTACGCTGCTCAAGAAAGCCGGCTTCAAACACGGCAAGTCACTGTCCAGGACATTATAGATTTTTTTGTCAGAAACATGGTGAATGAGCAGTTGGGTTCAATTTGCAATGCACATGTGGTACATGCTGATTCCAGTGACCACGGTGCCTTGGATGAGAAATGCGTACACTTAGCTGAGTTAGCAGCTACTGCAGTTGATTTTCCAAAGACCGGCAAGCTTGTCACCATGCCTCCAAATTTGAAACCGAAATTGTACCCTGATTTTATGGGGAAAGAGCACCACCAATCTTACAAGTCCAAGAAAATCCTGGGGAGACTTTACCGGCGGATCAAAGATGCCTATGATAAAGATATTGATGCTCCTGAGTTTAACTGTGTGTCCAGTGATATACTTTATGATACAGATCTTGAGGTTCCAGGATCTTCTGAATTCATTGCTGATGCATGGGAGCAAAAGTGCTCTTATGATGGCCAGTTAAGTGGATTACTGGGTCAATACAAAGTGAAAACAGAAGAAGAAGTTGTCACTGGACAGATCTGGTCCATGCCAAAATACAACAGCAGGAAGCAAGGGGAACTTAAGGAGAGGCTGAAGCACTCCTACAGTGCACTGAAAAAAGAATTTAGACAAATTTTTGAGAAACTGAAATCAGATGTTGGAGAATTAAGCGATAAAGAAAAAAATTTGTTGTATGAACAAAAAGCTTCAGCCTGGTATCAGGTGACATATCATCCTAAATGGGTGAAGAAATCCCTTGATTTGCAGCCTAAATCCTCAGATAACCAGAGTGCAGATAGTTTGGGGAATATGGTGATGTTGAGTTTTCCATGGATTGCAGTTGATTACCTTGCTTGCACAAAGACAAGGCATAGGAGAGTTAAAGATTTTGACTCAACCAAGCAAGTTGATTCTCTGGCGAAGTATCTATCCGAAAGGTTATAG
Protein sequence

>MsG0380017425.01.T01

TIGNMDLEGTVKDSVLTTTQVSIGGFDSDVKASDLVSYLESQIGYVDRYRNTDDYKKVAPHAFVHFTLPDSATEALNAAGRCDLILNGKVLKVISGPQNPNFLNQRRRTEAPFKMSDVIVEIGTLVSLADFTVAWRGCDKGGYCVLIQRNRTADDDIDESVIIDLLDDDDPWIRTTDFTPSAAIGRCNYYRISIPPRHGAKLTKALEYLRCQRVPQIPLNRPPKIQNEPDFGVPMSDAFFYIDSQKDISFDIMFLINAIVHRGIFNQYSLSNKFFELLKNQPKDVNGCSEAHMYLQAPTVDAAKRLEAVQKWLLRNPKFYQISKQLDDVMEVRRLVVTPTKAYCISPEVELSNRVLRRFRDVSDRFLRVTFMDEGQQTLNNYALNYYVAPIDGQCFSSTYASVEVPANEVNSMLPDVERNNYVFSDGIGIITTDLAVEVAEKLKLDKAPSAYQIRQIITLLSALDVPDEIFWKMQEGMLSSLNQMLVDRDVAYDVLTKSCAEHGNAAAIMLSCGFSPKTEPHLRGMLNSIRAAQLWGLREKSRIFVSSGRWLMGVLDELGVLEQGQCFVQVSTPSLENCFSKHGSRFSETKTVHVIKGIVVIAKNPCLHPGDVRVLEAVDVPDLHHLYDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDGNLIPPSKRSWPPMEYAAQESRLQTRQVTVQDIIDFFVRNMVNEQLGSICNAHVVHADSSDHGALDEKCVHLAELAATAVDFPKTGKLVTMPPNLKPKLYPDFMGKEHHQSYKSKKILGRLYRRIKDAYDKDIDAPEFNCVSSDILYDTDLEVPGSSEFIADAWEQKCSYDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRQIFEKLKSDVGELSDKEKNLLYEQKASAWYQVTYHPKWVKKSLDLQPKSSDNQSADSLGNMVMLSFPWIAVDYLACTKTRHRRVKDFDSTKQVDSLAKYLSERL*