AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017585.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017585.01.T01 MTR_3g109390 93.233 133 4 1 200 327 257 389 2.25e-82 254
MsG0380017585.01.T01 MTR_3g109390 97.531 81 2 0 103 183 37 117 5.89e-47 163
MsG0380017585.01.T01 MTR_3g109390 93.233 133 4 1 200 327 279 411 8.11e-82 254
MsG0380017585.01.T01 MTR_3g109390 97.531 81 2 0 103 183 59 139 1.29e-46 162
MsG0380017585.01.T01 MTR_3g109390 93.233 133 4 1 200 327 248 380 2.41e-81 252
MsG0380017585.01.T01 MTR_3g109390 72.727 121 9 1 63 183 12 108 5.59e-49 168
MsG0380017585.01.T01 MTR_3g109390 94.656 131 4 1 200 327 270 400 2.80e-81 252
MsG0380017585.01.T01 MTR_3g109390 73.377 154 17 1 30 183 1 130 6.45e-63 205
MsG0380017585.01.T01 MTR_3g109390 93.233 133 4 1 200 327 270 402 5.31e-81 251
MsG0380017585.01.T01 MTR_3g109390 73.377 154 17 1 30 183 1 130 6.23e-63 205
MsG0380017585.01.T01 MTR_3g109390 73.377 154 17 1 30 183 1 130 9.31e-64 205
MsG0380017585.01.T01 MTR_3g109390 100.000 49 0 0 200 248 270 318 5.89e-28 111
MsG0380017585.01.T01 MTR_4g104620 62.791 129 43 1 200 323 201 329 5.73e-48 164
MsG0380017585.01.T01 MTR_4g104620 57.407 54 23 0 130 183 7 60 3.39e-14 72.8
MsG0380017585.01.T01 MTR_4g104620 62.791 129 43 1 200 323 192 320 6.51e-48 164
MsG0380017585.01.T01 MTR_4g104620 62.500 48 18 0 136 183 4 51 5.85e-14 72.0
MsG0380017585.01.T01 MTR_3g076540 62.791 129 43 1 200 323 192 320 1.34e-47 163
MsG0380017585.01.T01 MTR_3g076540 65.957 47 16 0 136 182 4 50 4.65e-14 72.4
MsG0380017585.01.T01 MTR_3g076540 62.791 129 43 1 200 323 209 337 2.07e-47 163
MsG0380017585.01.T01 MTR_3g076540 43.956 91 27 2 92 182 1 67 1.23e-14 73.9
MsG0380017585.01.T01 MTR_4g104620 62.791 129 43 1 200 323 295 423 8.68e-47 164
MsG0380017585.01.T01 MTR_4g104620 38.415 164 56 4 39 183 17 154 1.59e-25 106
MsG0380017585.01.T01 MTR_3g076540 62.791 129 43 1 200 323 291 419 1.77e-46 162
MsG0380017585.01.T01 MTR_3g076540 40.385 156 54 4 41 182 19 149 4.92e-25 104
MsG0380017585.01.T01 MTR_3g076540 46.193 197 77 3 132 323 255 427 2.01e-46 162
MsG0380017585.01.T01 MTR_3g076540 40.385 156 54 4 41 182 19 149 5.67e-25 104
MsG0380017585.01.T01 MTR_3g086530 61.538 130 43 2 200 323 120 248 1.13e-43 150
MsG0380017585.01.T01 MTR_3g086530 61.538 130 43 2 200 323 175 303 3.62e-43 151
MsG0380017585.01.T01 MTR_3g086530 61.538 130 43 2 200 323 292 420 1.00e-41 150
MsG0380017585.01.T01 MTR_3g086530 41.718 163 50 3 39 182 12 148 4.51e-27 110
MsG0380017585.01.T01 MTR_3g086530 69.318 88 20 2 200 281 292 378 6.29e-33 125
MsG0380017585.01.T01 MTR_3g086530 41.718 163 50 3 39 182 12 148 3.08e-27 110
MsG0380017585.01.T01 MTR_3g086530 41.718 163 50 3 39 182 12 148 1.18e-27 110
MsG0380017585.01.T01 MTR_4g056390 30.000 140 66 4 202 323 353 478 8.01e-12 66.2
MsG0380017585.01.T01 MTR_1g075610 30.370 135 74 3 191 323 192 308 2.86e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017585.01.T01 AT4G32660 69.466 131 34 1 200 324 155 285 1.52e-60 195
MsG0380017585.01.T01 AT4G32660 69.466 131 34 1 200 324 259 389 2.66e-59 195
MsG0380017585.01.T01 AT4G32660 53.103 145 38 2 38 182 4 118 3.98e-39 142
MsG0380017585.01.T01 AT4G32660 69.466 131 34 1 200 324 267 397 2.71e-59 196
MsG0380017585.01.T01 AT4G32660 51.333 150 43 2 33 182 7 126 1.64e-39 144
MsG0380017585.01.T01 AT4G24740 59.690 129 47 1 200 323 89 217 1.29e-49 165
MsG0380017585.01.T01 AT4G24740 59.690 129 47 1 200 323 89 217 1.29e-49 165
MsG0380017585.01.T01 AT3G53570 62.308 130 43 1 200 323 300 429 1.91e-49 171
MsG0380017585.01.T01 AT3G53570 40.476 168 56 5 35 183 15 157 9.58e-25 104
MsG0380017585.01.T01 AT3G53570 62.308 130 43 1 200 323 300 429 1.91e-49 171
MsG0380017585.01.T01 AT3G53570 40.476 168 56 5 35 183 15 157 9.58e-25 104
MsG0380017585.01.T01 AT3G53570 62.308 130 43 1 200 323 314 443 2.14e-49 171
MsG0380017585.01.T01 AT3G53570 40.476 168 56 5 35 183 29 171 1.09e-24 104
MsG0380017585.01.T01 AT3G53570 62.308 130 43 1 200 323 314 443 2.14e-49 171
MsG0380017585.01.T01 AT3G53570 40.476 168 56 5 35 183 29 171 1.09e-24 104
MsG0380017585.01.T01 AT3G53570 62.308 130 43 1 200 323 314 443 2.14e-49 171
MsG0380017585.01.T01 AT3G53570 40.476 168 56 5 35 183 29 171 1.09e-24 104
MsG0380017585.01.T01 AT4G24740 59.690 129 47 1 200 323 192 320 5.26e-48 164
MsG0380017585.01.T01 AT4G24740 59.574 47 19 0 136 182 4 50 3.53e-13 69.7
MsG0380017585.01.T01 AT4G24740 59.690 129 47 1 200 323 192 320 5.26e-48 164
MsG0380017585.01.T01 AT4G24740 59.574 47 19 0 136 182 4 50 3.53e-13 69.7
MsG0380017585.01.T01 AT4G24740 59.690 129 47 1 200 323 192 320 5.26e-48 164
MsG0380017585.01.T01 AT4G24740 59.574 47 19 0 136 182 4 50 3.53e-13 69.7
MsG0380017585.01.T01 AT4G24740 59.690 129 47 1 200 323 257 385 4.00e-47 164
MsG0380017585.01.T01 AT4G24740 44.144 111 37 2 72 182 30 115 5.51e-23 98.6
MsG0380017585.01.T01 AT4G24740 59.690 129 47 1 200 323 295 423 7.78e-47 164
MsG0380017585.01.T01 AT4G24740 36.527 167 53 4 39 182 17 153 1.83e-23 100
MsG0380017585.01.T01 AT4G32660 51.333 150 43 2 33 182 7 126 9.26e-40 143
MsG0380017585.01.T01 AT4G32660 73.034 89 18 1 200 282 267 355 1.87e-36 134
MsG0380017585.01.T01 AT4G24740 36.527 167 53 4 39 182 17 153 5.72e-24 100
MsG0380017585.01.T01 AT4G24740 83.673 49 8 0 200 248 295 343 4.32e-23 98.2
MsG0380017585.01.T01 AT4G24740 36.527 167 53 4 39 182 17 153 5.76e-24 100
MsG0380017585.01.T01 AT4G24740 83.673 49 8 0 200 248 192 240 6.10e-24 98.6
MsG0380017585.01.T01 AT4G24740 59.574 47 19 0 136 182 4 50 1.63e-13 69.7
MsG0380017585.01.T01 AT1G76540 29.927 137 72 3 191 323 188 304 6.90e-12 65.9
MsG0380017585.01.T01 AT1G20930 31.429 140 66 3 191 323 190 306 1.32e-11 65.1
MsG0380017585.01.T01 AT3G44850 32.857 140 62 6 202 323 356 481 2.00e-11 65.1
MsG0380017585.01.T01 AT2G38620 33.083 133 73 4 191 323 125 241 6.58e-11 62.0

Find 100 sgRNAs with CRISPR-Local

Find 506 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCTATTGAACATAATTAT+TGG 0.190340 3:-98118777 MsG0380017585.01.T01:three_prime_UTR
GTTTCAGACTCATGAAAATT+TGG 0.209964 3:-98119572 MsG0380017585.01.T01:CDS
ACCAACCACTGCCAAATTTC+TGG 0.248937 3:+98123076 None:intergenic
AGATAAAATTCTCAGCAAAA+TGG 0.261730 3:-98122110 MsG0380017585.01.T01:intron
GGCAATGATGGAGAGAGTTT+TGG 0.280611 3:-98119542 MsG0380017585.01.T01:CDS
TCACGATCGTCGTCTCTTCT+TGG 0.281498 3:+98123020 None:intergenic
CTCCCTTGAAACAGCTCCTT+CGG 0.283662 3:+98119262 None:intergenic
AGGCACCTTCGGTCGAGTTT+TGG 0.286156 3:-98121998 MsG0380017585.01.T01:CDS
TCCTGAATTGGTTCGATTAC+CGG 0.290840 3:-98121715 MsG0380017585.01.T01:CDS
CTCTTGATCATCCCTTCTTT+AGG 0.304316 3:-98118990 MsG0380017585.01.T01:CDS
TCCGGTAATCGAACCAATTC+AGG 0.307110 3:+98121714 None:intergenic
TCATTAACTGATTTGTTGTA+TGG 0.314065 3:-98119057 MsG0380017585.01.T01:CDS
TTCAAATAACATAAGGCATT+TGG 0.316926 3:+98118951 None:intergenic
GAAGAAGCTTGGTGATCTTA+AGG 0.349004 3:-98119225 MsG0380017585.01.T01:intron
TCCAACACTTGTTGTCTTAG+AGG 0.351820 3:+98125959 None:intergenic
CGCCGAGATTAAAGACATAA+TGG 0.351983 3:+98122994 None:intergenic
GGGACCTCTACCAGAGCATA+TGG 0.387839 3:-98119521 MsG0380017585.01.T01:intron
AATGCCTTATGTTATTTGAA+TGG 0.393858 3:-98118948 MsG0380017585.01.T01:three_prime_UTR
TTACATACCTTTGGAATTGA+AGG 0.396668 3:+98123172 None:intergenic
TTACAATGCATATGTGATTC+CGG 0.403247 3:+98121696 None:intergenic
TTTGGAGCACCTGGCAATGA+TGG 0.425144 3:-98119554 MsG0380017585.01.T01:CDS
TCCCTTGAAACAGCTCCTTC+GGG 0.428173 3:+98119263 None:intergenic
GCTAGTGCTGTAGGCACCTT+CGG 0.428753 3:-98122009 MsG0380017585.01.T01:CDS
CCAACCACTGCCAAATTTCT+GGG 0.430843 3:+98123077 None:intergenic
CACAATATCTCGCAGGGGTA+CGG 0.431103 3:-98119320 MsG0380017585.01.T01:intron
TGAACATAATTATTGGATAG+AGG 0.434262 3:-98118770 MsG0380017585.01.T01:three_prime_UTR
TTAAGTTGGAATCCTAAAGA+AGG 0.444665 3:+98118978 None:intergenic
TGGCGCCAGCCAGTCGTAGA+CGG 0.452552 3:-98125989 MsG0380017585.01.T01:CDS
ATTGTATCAGCTATGAGGTT+GGG 0.452732 3:+98125935 None:intergenic
GATAAAATTCTCAGCAAAAT+GGG 0.454575 3:-98122109 MsG0380017585.01.T01:intron
GGAAACGACCTCGTCTCGCT+TGG 0.458789 3:-98123216 MsG0380017585.01.T01:CDS
GAAACGACCTCGTCTCGCTT+GGG 0.459412 3:-98123215 MsG0380017585.01.T01:CDS
CTTGATCGCTACATAATCTC+TGG 0.464927 3:+98121957 None:intergenic
CTCTGGTAAGCAATGCCTAC+CGG 0.470063 3:-98118631 MsG0380017585.01.T01:three_prime_UTR
GGCGCCAGCCAGTCGTAGAC+GGG 0.470878 3:-98125988 MsG0380017585.01.T01:CDS
GGTCATCTCCATGTGATTTG+TGG 0.473282 3:-98119723 MsG0380017585.01.T01:CDS
CCTTGATTGTATCAGCTATG+AGG 0.477674 3:+98125930 None:intergenic
GGCCCGAAGGAGCTGTTTCA+AGG 0.489761 3:-98119265 MsG0380017585.01.T01:CDS
GGCCATTATGTCTTTAATCT+CGG 0.499456 3:-98122996 MsG0380017585.01.T01:CDS
CAGAGATTATGTAGCGATCA+AGG 0.502779 3:-98121956 MsG0380017585.01.T01:CDS
ACCTTTGGAATTGAAGGAGG+TGG 0.504072 3:+98123178 None:intergenic
GATCTTTGAACCATATGCTC+TGG 0.504088 3:+98119511 None:intergenic
AATAATTATGTTCAATAGAG+TGG 0.504744 3:+98118779 None:intergenic
CCATGTGATTTGTGGAGTGT+TGG 0.505435 3:-98119715 MsG0380017585.01.T01:CDS
CAGCATGTTGCTAGTGCTGT+AGG 0.508712 3:-98122018 MsG0380017585.01.T01:CDS
ATAACCATTCAAATAACATA+AGG 0.509983 3:+98118944 None:intergenic
TTACCCCGTCTACGACTGGC+TGG 0.509990 3:+98125984 None:intergenic
CCTCATAGCTGATACAATCA+AGG 0.512179 3:-98125930 MsG0380017585.01.T01:CDS
AAACTCTCTCCATCATTGCC+AGG 0.512831 3:+98119545 None:intergenic
ACCTTCAAATATTGATGTCC+CGG 0.513383 3:+98118612 None:intergenic
CCCAGAAATTTGGCAGTGGT+TGG 0.517994 3:-98123077 MsG0380017585.01.T01:CDS
GGATTTATCATTTATTGCAG+TGG 0.518698 3:-98118890 MsG0380017585.01.T01:three_prime_UTR
CATTGCAATGCAAATACAGT+TGG 0.521160 3:+98118821 None:intergenic
CGATCGTCGTCTCTTCTTGG+AGG 0.522170 3:+98123023 None:intergenic
TCATGAAAATTTGGAGCACC+TGG 0.527435 3:-98119563 MsG0380017585.01.T01:CDS
ACCTCTAAGACAACAAGTGT+TGG 0.528761 3:-98125960 MsG0380017585.01.T01:CDS
GATTGTATCAGCTATGAGGT+TGG 0.535893 3:+98125934 None:intergenic
TAAGTTGGAATCCTAAAGAA+GGG 0.537826 3:+98118979 None:intergenic
AAAATGACATTCCAGGTCTA+GGG 0.544013 3:-98119747 MsG0380017585.01.T01:intron
AGAAGGGATGATCAAGAGCT+TGG 0.544574 3:+98118995 None:intergenic
TGTATTTGCATTGCAATGGA+TGG 0.547816 3:-98118816 MsG0380017585.01.T01:three_prime_UTR
ACCGGGACATCAATATTTGA+AGG 0.547958 3:-98118613 MsG0380017585.01.T01:three_prime_UTR
GCTGTGTACAGATCCTGAAT+TGG 0.549041 3:-98121727 MsG0380017585.01.T01:CDS
GGTCTTACCCCGTCTACGAC+TGG 0.555666 3:+98125980 None:intergenic
TCTGGTAAGCAATGCCTACC+GGG 0.557079 3:-98118630 MsG0380017585.01.T01:three_prime_UTR
GCAAAATGGGTGAAGGTTAG+CGG 0.558808 3:-98122096 MsG0380017585.01.T01:CDS
ATACAACAAATCAGTTAATG+AGG 0.558835 3:+98119059 None:intergenic
CAACTGTATTTGCATTGCAA+TGG 0.562108 3:-98118820 MsG0380017585.01.T01:three_prime_UTR
TGAACCATATGCTCTGGTAG+AGG 0.562280 3:+98119517 None:intergenic
GAATTATGTTGTACTCGAGA+AGG 0.566792 3:-98118748 MsG0380017585.01.T01:three_prime_UTR
ATAAATGCAGTGAAGAAGCT+TGG 0.570066 3:-98119236 MsG0380017585.01.T01:CDS
CATACCTTTGGAATTGAAGG+AGG 0.570410 3:+98123175 None:intergenic
CGAGCAGTAATGCGATTGGA+TGG 0.575555 3:+98119018 None:intergenic
TCATGGAAAGGGAACGAACT+CGG 0.583235 3:-98123237 MsG0380017585.01.T01:intron
CATTCTCATTGAGTTATGCA+CGG 0.584438 3:-98119689 MsG0380017585.01.T01:intron
CACGTCATGTTGAGTCGTCA+AGG 0.590275 3:-98119083 MsG0380017585.01.T01:CDS
GGTACCCAGAAATTTGGCAG+TGG 0.594065 3:-98123081 MsG0380017585.01.T01:CDS
TCCACCTCCTTCAATTCCAA+AGG 0.594074 3:-98123179 MsG0380017585.01.T01:intron
GCCCGAAGGAGCTGTTTCAA+GGG 0.594720 3:-98119264 MsG0380017585.01.T01:CDS
CTCATAGCTGATACAATCAA+GGG 0.596472 3:-98125929 MsG0380017585.01.T01:CDS
ATATCATTCAGAGGGCACTC+TGG 0.602779 3:-98118648 MsG0380017585.01.T01:three_prime_UTR
TTGGCGAGCAGTAATGCGAT+TGG 0.603939 3:+98119014 None:intergenic
TCAAATATTGATGTCCCGGT+AGG 0.604919 3:+98118616 None:intergenic
ATTCTCAGCAAAATGGGTGA+AGG 0.606392 3:-98122103 MsG0380017585.01.T01:intron
TTGGCAGTGGTTGGTGACGG+TGG 0.610790 3:-98123068 MsG0380017585.01.T01:CDS
CCAACACTCCACAAATCACA+TGG 0.613754 3:+98119715 None:intergenic
GTATTTGCATTGCAATGGAT+GGG 0.622478 3:-98118815 MsG0380017585.01.T01:three_prime_UTR
GTACTCGAGAAGGCTTGAGA+AGG 0.627796 3:-98118738 MsG0380017585.01.T01:three_prime_UTR
AATTTGGCAGTGGTTGGTGA+CGG 0.628481 3:-98123071 MsG0380017585.01.T01:CDS
AGAAGAGACGACGATCGTGA+TGG 0.636898 3:-98123017 MsG0380017585.01.T01:CDS
AGCGTGGATCACGACTAAGA+TGG 0.638785 3:-98119286 MsG0380017585.01.T01:CDS
ACATTCCAAAACTCGACCGA+AGG 0.639593 3:+98121993 None:intergenic
CAAAACCTCCAGAAAATGTG+TGG 0.641704 3:-98126009 MsG0380017585.01.T01:CDS
TTTGCATTGCAATGGATGGG+TGG 0.644054 3:-98118812 MsG0380017585.01.T01:three_prime_UTR
GCGCCAGCCAGTCGTAGACG+GGG 0.645315 3:-98125987 MsG0380017585.01.T01:CDS
GCTGCATCCCAAGCGAGACG+AGG 0.645412 3:+98123208 None:intergenic
ATGACATTCCAGGTCTAGGG+TGG 0.654171 3:-98119744 MsG0380017585.01.T01:intron
TCGCGATGCAGCAATGATCG+AGG 0.670546 3:-98121911 MsG0380017585.01.T01:CDS
TCACGACTAAGATGGCCCGA+AGG 0.691921 3:-98119278 MsG0380017585.01.T01:CDS
TCATAGCTGATACAATCAAG+GGG 0.701154 3:-98125928 MsG0380017585.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTAAATATTTTTTTT+TGG + Chr3:98121024-98121043 None:intergenic 0.0%
!! AAGAAAAAGTTAAAAATAAT+TGG + Chr3:98124210-98124229 None:intergenic 10.0%
!! AGAAAAAGTTAAAAATAATT+GGG + Chr3:98124209-98124228 None:intergenic 10.0%
!! TAAGTAGATAATAAATTATA+TGG + Chr3:98119491-98119510 None:intergenic 10.0%
!! TATAATTTATTATCTACTTA+AGG - Chr3:98119491-98119510 MsG0380017585.01.T01:intron 10.0%
!!! AAATTTATTTAAAAAGTGTA+TGG + Chr3:98120912-98120931 None:intergenic 10.0%
!!! ATAATTTTTACACTTTTTAA+AGG + Chr3:98120695-98120714 None:intergenic 10.0%
!!! ATTTTGTAACAAATAAATTT+AGG + Chr3:98121145-98121164 None:intergenic 10.0%
!!! TATTTAAAATATTAGTTTGT+TGG - Chr3:98122020-98122039 MsG0380017585.01.T01:CDS 10.0%
!!! TCAATTTTATTTGAAATTTT+AGG - Chr3:98121497-98121516 MsG0380017585.01.T01:intron 10.0%
!!! TTCTTTAGTTTAATAAAATA+GGG - Chr3:98122340-98122359 MsG0380017585.01.T01:intron 10.0%
!!! TTTCTTTAGTTTAATAAAAT+AGG - Chr3:98122339-98122358 MsG0380017585.01.T01:intron 10.0%
!!! TTTTGTAACAAATAAATTTA+GGG + Chr3:98121144-98121163 None:intergenic 10.0%
!! AATTATAATATTTAATCACC+TGG + Chr3:98125214-98125233 None:intergenic 15.0%
!! GTTATATATGTAACAAAAAA+AGG + Chr3:98120669-98120688 None:intergenic 15.0%
!! TTATTGTAAATTGCAATATT+CGG + Chr3:98121172-98121191 None:intergenic 15.0%
!! TTTAATGAAAATTACTTGAT+TGG - Chr3:98123762-98123781 MsG0380017585.01.T01:intron 15.0%
!!! AAATTTTTATATCATTCAGA+GGG - Chr3:98125943-98125962 MsG0380017585.01.T01:CDS 15.0%
!!! AAGTGATTTAATTAACTTTT+TGG + Chr3:98124685-98124704 None:intergenic 15.0%
!!! AGTTTTGTATTATTTGAAAA+TGG - Chr3:98123053-98123072 MsG0380017585.01.T01:CDS 15.0%
!!! CTTTATCTATTTTTTTATTG+AGG + Chr3:98120047-98120066 None:intergenic 15.0%
!!! GTTTTGTATTATTTGAAAAT+GGG - Chr3:98123054-98123073 MsG0380017585.01.T01:CDS 15.0%
!!! TAATATTTTAAATAGCACAT+AGG + Chr3:98122014-98122033 None:intergenic 15.0%
!!! TCTTTAGTTTAATAAAATAG+GGG - Chr3:98122341-98122360 MsG0380017585.01.T01:intron 15.0%
!!! TCTTTGAAATCTTAAAAAAA+TGG - Chr3:98119091-98119110 MsG0380017585.01.T01:CDS 15.0%
!!! TGTAAAATAATTTTACACTA+TGG + Chr3:98120954-98120973 None:intergenic 15.0%
!!! TGTTTTATTATTATATCTCT+TGG - Chr3:98123486-98123505 MsG0380017585.01.T01:intron 15.0%
!!! TTTTATTTTATTTTCGTGAA+AGG + Chr3:98124610-98124629 None:intergenic 15.0%
!! AAAACAAATGTGAAAATAGA+GGG - Chr3:98122311-98122330 MsG0380017585.01.T01:intron 20.0%
!! AAAATTACGATAACTCTTAA+CGG - Chr3:98120788-98120807 MsG0380017585.01.T01:intron 20.0%
!! AACAAATTGCAACATAAATT+GGG + Chr3:98123197-98123216 None:intergenic 20.0%
!! AATAATTATGTTCAATAGAG+TGG + Chr3:98125823-98125842 None:intergenic 20.0%
!! AATTCAACCATTAATGTAAA+TGG - Chr3:98121330-98121349 MsG0380017585.01.T01:intron 20.0%
!! ACACATTAAATTGAGAAATA+GGG + Chr3:98121714-98121733 None:intergenic 20.0%
!! ACGAAATAAAGAAAAATACA+AGG + Chr3:98120185-98120204 None:intergenic 20.0%
!! ACTCTATTGAACATAATTAT+TGG - Chr3:98125822-98125841 MsG0380017585.01.T01:intron 20.0%
!! ACTTATAAAAGAGAGTTTAA+AGG + Chr3:98124648-98124667 None:intergenic 20.0%
!! ATAACCATTCAAATAACATA+AGG + Chr3:98125658-98125677 None:intergenic 20.0%
!! ATGAAAAATGCTAAATAGTA+CGG + Chr3:98124771-98124790 None:intergenic 20.0%
!! ATGATCTATGTTAGATAAAT+GGG + Chr3:98119768-98119787 None:intergenic 20.0%
!! ATTTATCAAAACAAACTAAC+TGG + Chr3:98122978-98122997 None:intergenic 20.0%
!! GAAATCTTAAAAAAATGGTT+GGG - Chr3:98119096-98119115 MsG0380017585.01.T01:CDS 20.0%
!! GATATAAAAATTTCATCGTT+TGG + Chr3:98125936-98125955 None:intergenic 20.0%
!! TGAAATCTTAAAAAAATGGT+TGG - Chr3:98119095-98119114 MsG0380017585.01.T01:CDS 20.0%
!! TTAGATACCATTTACATTAA+TGG + Chr3:98121340-98121359 None:intergenic 20.0%
!!! AAAGTTCGATTTTAAAAAAG+AGG + Chr3:98122095-98122114 None:intergenic 20.0%
!!! AACAAGCTAATATTTTCAAA+AGG + Chr3:98122130-98122149 None:intergenic 20.0%
!!! AACACTATTTTTTTTGTTTG+AGG + Chr3:98124568-98124587 None:intergenic 20.0%
!!! AAGTATAGGTTTTTCTTTTT+AGG + Chr3:98119384-98119403 None:intergenic 20.0%
!!! AAGTTCGATTTTAAAAAAGA+GGG + Chr3:98122094-98122113 None:intergenic 20.0%
!!! AATTGTTAGAATTTTCCAAA+GGG + Chr3:98120636-98120655 None:intergenic 20.0%
!!! ACAAGCTAATATTTTCAAAA+GGG + Chr3:98122129-98122148 None:intergenic 20.0%
!!! ACACTATTTTTTTTGTTTGA+GGG + Chr3:98124567-98124586 None:intergenic 20.0%
!!! ATAACAAGAAGTATATTTTC+TGG + Chr3:98123659-98123678 None:intergenic 20.0%
!!! ATTAGTTTAATTACTAGTAC+TGG + Chr3:98121113-98121132 None:intergenic 20.0%
!!! ATTCGGTTAAATTTTTTAGA+GGG - Chr3:98119857-98119876 MsG0380017585.01.T01:intron 20.0%
!!! ATTTTTCTTTATTTCGTTTG+TGG - Chr3:98120188-98120207 MsG0380017585.01.T01:intron 20.0%
!!! CTAAATTCCTAATTTTAAAC+CGG + Chr3:98120542-98120561 None:intergenic 20.0%
!!! CTAGATTTTTTTTTTTGGAA+AGG - Chr3:98122780-98122799 MsG0380017585.01.T01:intron 20.0%
!!! CTTTAGTTTAATAAAATAGG+GGG - Chr3:98122342-98122361 MsG0380017585.01.T01:intron 20.0%
!!! GAAATTTTTATATCATTCAG+AGG - Chr3:98125942-98125961 MsG0380017585.01.T01:CDS 20.0%
!!! TATCTATTTTTTTATTGAGG+AGG + Chr3:98120044-98120063 None:intergenic 20.0%
!!! TATTCGGTTAAATTTTTTAG+AGG - Chr3:98119856-98119875 MsG0380017585.01.T01:intron 20.0%
!!! TTAAAACACAGTTAATTTGA+TGG + Chr3:98125155-98125174 None:intergenic 20.0%
!!! TTCATGGGTTTTATAAAATA+GGG + Chr3:98122064-98122083 None:intergenic 20.0%
!!! TTGGATACATTCTAATTTTT+TGG + Chr3:98125917-98125936 None:intergenic 20.0%
!!! TTTATTTTCACGAAAATTCA+CGG - Chr3:98124409-98124428 MsG0380017585.01.T01:intron 20.0%
!!! TTTCATGGGTTTTATAAAAT+AGG + Chr3:98122065-98122084 None:intergenic 20.0%
!!! TTTTCATTAGTAAAACTGTT+AGG - Chr3:98124784-98124803 MsG0380017585.01.T01:intron 20.0%
! AATCAAGAGAATGAAATTGA+AGG + Chr3:98121461-98121480 None:intergenic 25.0%
! ACCTTAATCAATACAAGTAT+AGG + Chr3:98119398-98119417 None:intergenic 25.0%
! AGATAAAATTCTCAGCAAAA+TGG - Chr3:98122489-98122508 MsG0380017585.01.T01:intron 25.0%
! AGATCATGTATCTTACATTA+AGG - Chr3:98119781-98119800 MsG0380017585.01.T01:intron 25.0%
! AGTTTAGGAAGACTATTATT+CGG - Chr3:98119840-98119859 MsG0380017585.01.T01:intron 25.0%
! ATAAGAAGTTGTGTCTAAAA+TGG - Chr3:98118734-98118753 MsG0380017585.01.T01:three_prime_UTR 25.0%
! ATACAACAAATCAGTTAATG+AGG + Chr3:98125543-98125562 None:intergenic 25.0%
! ATAGTGAAAATCAAAGATCT+AGG + Chr3:98124106-98124125 None:intergenic 25.0%
! ATATCATGATTTGAACGAAT+TGG - Chr3:98119200-98119219 MsG0380017585.01.T01:intron 25.0%
! ATTGATACTCTTAAGAGTTA+TGG + Chr3:98120746-98120765 None:intergenic 25.0%
! CAAAACAAATGTGAAAATAG+AGG - Chr3:98122310-98122329 MsG0380017585.01.T01:intron 25.0%
! CAACAAATTGCAACATAAAT+TGG + Chr3:98123198-98123217 None:intergenic 25.0%
! CAACATCAAACAAATTCAAT+TGG - Chr3:98120280-98120299 MsG0380017585.01.T01:intron 25.0%
! CAATTGCCTTTGATAAAATT+CGG - Chr3:98119581-98119600 MsG0380017585.01.T01:CDS 25.0%
! CACACATTAAATTGAGAAAT+AGG + Chr3:98121715-98121734 None:intergenic 25.0%
! CACTTCCAAAAAAAAAAAAC+CGG + Chr3:98120512-98120531 None:intergenic 25.0%
! CATGATCTATGTTAGATAAA+TGG + Chr3:98119769-98119788 None:intergenic 25.0%
! CCTGCATAAAGAATAATAAT+CGG + Chr3:98125487-98125506 None:intergenic 25.0%
! CTGACAACTAAAAGATAAAT+TGG - Chr3:98119167-98119186 MsG0380017585.01.T01:intron 25.0%
! GATAAAATTCTCAGCAAAAT+GGG - Chr3:98122490-98122509 MsG0380017585.01.T01:intron 25.0%
! GATCATGTATCTTACATTAA+GGG - Chr3:98119782-98119801 MsG0380017585.01.T01:intron 25.0%
! GTAAATGGTATCTAATTTCA+TGG - Chr3:98121345-98121364 MsG0380017585.01.T01:intron 25.0%
! TACTTAAGGATAAGCATATT+CGG - Chr3:98119505-98119524 MsG0380017585.01.T01:intron 25.0%
! TCATCAACAAGAAATAGATT+TGG + Chr3:98124296-98124315 None:intergenic 25.0%
! TCCAAAAAAAAAAATCTAGC+AGG + Chr3:98122779-98122798 None:intergenic 25.0%
! TGAACATAATTATTGGATAG+AGG - Chr3:98125829-98125848 MsG0380017585.01.T01:intron 25.0%
! TTGTCTTAAGATTCAACATT+GGG + Chr3:98122210-98122229 None:intergenic 25.0%
! TTGTTCATGTCAACAATAAA+AGG + Chr3:98118915-98118934 None:intergenic 25.0%
! TTTGTCTTAAGATTCAACAT+TGG + Chr3:98122211-98122230 None:intergenic 25.0%
!! AAGCTAATATTTTCAAAAGG+GGG + Chr3:98122127-98122146 None:intergenic 25.0%
!! AATGCCTTATGTTATTTGAA+TGG - Chr3:98125651-98125670 MsG0380017585.01.T01:intron 25.0%
!! ACTAGGCTTAATTATACTTT+TGG + Chr3:98122369-98122388 None:intergenic 25.0%
!! AGTATGTAATATTTTCAGCA+TGG - Chr3:98125113-98125132 MsG0380017585.01.T01:intron 25.0%
!! CAAGCTAATATTTTCAAAAG+GGG + Chr3:98122128-98122147 None:intergenic 25.0%
!! CAATTGTTAGAATTTTCCAA+AGG + Chr3:98120637-98120656 None:intergenic 25.0%
!! CTAACAAAAATTGATAGTTG+TGG + Chr3:98121303-98121322 None:intergenic 25.0%
!! CTCTATTTTCACATTTGTTT+TGG + Chr3:98122312-98122331 None:intergenic 25.0%
!! TAAGAAGTTGTGTCTAAAAT+GGG - Chr3:98118735-98118754 MsG0380017585.01.T01:three_prime_UTR 25.0%
!! TGAAAGTCAAGACATTTTAA+AGG - Chr3:98119887-98119906 MsG0380017585.01.T01:intron 25.0%
!! TTCAAATAACATAAGGCATT+TGG + Chr3:98125651-98125670 None:intergenic 25.0%
!!! AAGACATTTTAAAGGATAAG+AGG - Chr3:98119895-98119914 MsG0380017585.01.T01:intron 25.0%
!!! ACCTATACTTGTATTGATTA+AGG - Chr3:98119394-98119413 MsG0380017585.01.T01:intron 25.0%
!!! ACCTGCTAGATTTTTTTTTT+TGG - Chr3:98122775-98122794 MsG0380017585.01.T01:intron 25.0%
!!! AGTTCGATTTTAAAAAAGAG+GGG + Chr3:98122093-98122112 None:intergenic 25.0%
!!! CTTCTGTATCATTAGTTTTT+GGG - Chr3:98125412-98125431 MsG0380017585.01.T01:intron 25.0%
!!! GACTACAATTTTGCTTTAAA+TGG - Chr3:98125688-98125707 MsG0380017585.01.T01:intron 25.0%
!!! GTTTTTTTTTTTTGGAAGTG+TGG - Chr3:98120512-98120531 MsG0380017585.01.T01:intron 25.0%
!!! TAACTTTTTCTTGTACACTT+TGG - Chr3:98124218-98124237 MsG0380017585.01.T01:intron 25.0%
!!! TACACGTGTTAATTTTGATA+GGG - Chr3:98120570-98120589 MsG0380017585.01.T01:intron 25.0%
!!! TCATTAACTGATTTGTTGTA+TGG - Chr3:98125542-98125561 MsG0380017585.01.T01:intron 25.0%
!!! TCTTCTGTATCATTAGTTTT+TGG - Chr3:98125411-98125430 MsG0380017585.01.T01:intron 25.0%
!!! TGAAGAGATGTTTTAAAGTT+TGG + Chr3:98120130-98120149 None:intergenic 25.0%
!!! TGATTCAGCAAAATTGATTT+TGG - Chr3:98121773-98121792 MsG0380017585.01.T01:intron 25.0%
!!! TTTTCACTTTCTAGAATGAA+CGG + Chr3:98119249-98119268 None:intergenic 25.0%
!!! TTTTTTCTCACTCTTCAATT+TGG - Chr3:98122416-98122435 MsG0380017585.01.T01:intron 25.0%
AAAATAAATGTGCTAACCGA+GGG - Chr3:98119265-98119284 MsG0380017585.01.T01:CDS 30.0%
AAACAAATTCAATTGGACGA+AGG - Chr3:98120287-98120306 MsG0380017585.01.T01:intron 30.0%
AAAGGAACAAATGTAACTTC+TGG + Chr3:98118897-98118916 None:intergenic 30.0%
AAATTACTTGATTGGTACAG+AGG - Chr3:98123770-98123789 MsG0380017585.01.T01:intron 30.0%
AATACTTAGTACAGTACCAT+AGG + Chr3:98120612-98120631 None:intergenic 30.0%
AATTACTTGATTGGTACAGA+GGG - Chr3:98123771-98123790 MsG0380017585.01.T01:intron 30.0%
AATTCAACCAAAGAAAAAGG+TGG - Chr3:98124497-98124516 MsG0380017585.01.T01:intron 30.0%
ACCAAACTCAATCAAAACAT+GGG - Chr3:98118960-98118979 MsG0380017585.01.T01:exon 30.0%
AGCATCAAGTCACAAATTAA+GGG + Chr3:98121990-98122009 None:intergenic 30.0%
AGGATAATATAAGATGAGCT+GGG + Chr3:98124086-98124105 None:intergenic 30.0%
ATAATGCCTTGTAGAAACAA+TGG + Chr3:98123895-98123914 None:intergenic 30.0%
ATGTCAGATGAACACAATTT+AGG - Chr3:98123796-98123815 MsG0380017585.01.T01:intron 30.0%
ATTAAGGGTAATTAACGATG+AGG - Chr3:98119797-98119816 MsG0380017585.01.T01:intron 30.0%
ATTGATTAAGGTCATCCAAA+GGG - Chr3:98119406-98119425 MsG0380017585.01.T01:intron 30.0%
ATTGTCGTAACTTCTAATTG+TGG + Chr3:98119024-98119043 None:intergenic 30.0%
CAAAACAAACTAACTGGATA+TGG + Chr3:98122972-98122991 None:intergenic 30.0%
CAACAACAAACAAACAAACT+AGG + Chr3:98122386-98122405 None:intergenic 30.0%
CATAATAATAGATACCGTTC+AGG + Chr3:98124455-98124474 None:intergenic 30.0%
CCGATTATTATTCTTTATGC+AGG - Chr3:98125484-98125503 MsG0380017585.01.T01:intron 30.0%
GAAAGAAGTTAGTTACATCT+AGG + Chr3:98121642-98121661 None:intergenic 30.0%
GAATCCAAAAAAGTGAGTTT+AGG + Chr3:98122249-98122268 None:intergenic 30.0%
GAGGAAAATTTACATACCTT+TGG + Chr3:98121439-98121458 None:intergenic 30.0%
GCACAATCAAAATTGGAAAT+TGG + Chr3:98124172-98124191 None:intergenic 30.0%
GGATTTATCATTTATTGCAG+TGG - Chr3:98125709-98125728 MsG0380017585.01.T01:intron 30.0%
GGGAATTAATCTTAAGCAAA+CGG + Chr3:98124547-98124566 None:intergenic 30.0%
GGTATCTAATTTCATGGAAA+GGG - Chr3:98121351-98121370 MsG0380017585.01.T01:intron 30.0%
GTTTCAGACTCATGAAAATT+TGG - Chr3:98125027-98125046 MsG0380017585.01.T01:intron 30.0%
TAACGATGAGGACTAAAATT+GGG - Chr3:98119809-98119828 MsG0380017585.01.T01:intron 30.0%
TAAGCACTTATTAGACTGTT+TGG + Chr3:98121929-98121948 None:intergenic 30.0%
TACACATGTCATAGTCTAAT+TGG + Chr3:98119987-98120006 None:intergenic 30.0%
TAGGATAATATAAGATGAGC+TGG + Chr3:98124087-98124106 None:intergenic 30.0%
TATAGTCTGCGATTGAAATA+AGG + Chr3:98119302-98119321 None:intergenic 30.0%
TATGTAAAGCTTCTAGTGTA+AGG - Chr3:98123685-98123704 MsG0380017585.01.T01:intron 30.0%
TATGTGTGTGCAATTATTGA+TGG - Chr3:98120453-98120472 MsG0380017585.01.T01:intron 30.0%
TCTTCATAAGATAATGCAGT+TGG + Chr3:98119631-98119650 None:intergenic 30.0%
TCTTTGAACCAACTAAAACA+TGG - Chr3:98119741-98119760 MsG0380017585.01.T01:intron 30.0%
TGAAACTCATAGACAAAACT+AGG - Chr3:98118710-98118729 MsG0380017585.01.T01:three_prime_UTR 30.0%
TGCAATTCAACCAAAGAAAA+AGG - Chr3:98124494-98124513 MsG0380017585.01.T01:intron 30.0%
TGGTATCTAATTTCATGGAA+AGG - Chr3:98121350-98121369 MsG0380017585.01.T01:intron 30.0%
TGTCTTAAGATTCAACATTG+GGG + Chr3:98122209-98122228 None:intergenic 30.0%
TGTTGACATGAACAAAATTC+TGG - Chr3:98118920-98118939 MsG0380017585.01.T01:three_prime_UTR 30.0%
TTAAAACATCTCTTCACTCA+AGG - Chr3:98120134-98120153 MsG0380017585.01.T01:intron 30.0%
TTAACGATGAGGACTAAAAT+TGG - Chr3:98119808-98119827 MsG0380017585.01.T01:intron 30.0%
TTACAATGCATATGTGATTC+CGG + Chr3:98122906-98122925 None:intergenic 30.0%
TTCCAAAAAAAAAAAACCGG+TGG + Chr3:98120509-98120528 None:intergenic 30.0%
! AAACTTAGATACTGTTGCTT+AGG - Chr3:98119943-98119962 MsG0380017585.01.T01:intron 30.0%
! AAGAAGTTGTGTCTAAAATG+GGG - Chr3:98118736-98118755 MsG0380017585.01.T01:three_prime_UTR 30.0%
! AATTCCTAATTTTAAACCGG+TGG + Chr3:98120539-98120558 None:intergenic 30.0%
! AGCTAATATTTTCAAAAGGG+GGG + Chr3:98122126-98122145 None:intergenic 30.0%
! CTACTGGAAACATTTTTAAC+AGG + Chr3:98124024-98124043 None:intergenic 30.0%
! CTAGGTAACGAAATAGTTTT+TGG - Chr3:98123932-98123951 MsG0380017585.01.T01:intron 30.0%
! TAAGTTGGAATCCTAAAGAA+GGG + Chr3:98125623-98125642 None:intergenic 30.0%
! TATTGATTAAGGTCATCCAA+AGG - Chr3:98119405-98119424 MsG0380017585.01.T01:intron 30.0%
! TCCAAAAGCCACAATTTTTA+GGG - Chr3:98122267-98122286 MsG0380017585.01.T01:intron 30.0%
! TGTTAGCCGAATTTTATCAA+AGG + Chr3:98119590-98119609 None:intergenic 30.0%
! TTCCAAAAGCCACAATTTTT+AGG - Chr3:98122266-98122285 MsG0380017585.01.T01:intron 30.0%
! TTCCTTTCAACGCATTTTAA+TGG - Chr3:98123304-98123323 MsG0380017585.01.T01:intron 30.0%
!! ACACGTGTTAATTTTGATAG+GGG - Chr3:98120571-98120590 MsG0380017585.01.T01:intron 30.0%
!! AGTTTTATACCTCTAAACAG+AGG + Chr3:98118776-98118795 None:intergenic 30.0%
!! ATTTGGTGTTATGAAAGGTT+TGG - Chr3:98122433-98122452 MsG0380017585.01.T01:intron 30.0%
!! ATTTTAGGTACCCAGAAATT+TGG - Chr3:98121512-98121531 MsG0380017585.01.T01:intron 30.0%
!! CTTCAATTTGGTGTTATGAA+AGG - Chr3:98122428-98122447 MsG0380017585.01.T01:intron 30.0%
!! GTACACGTGTTAATTTTGAT+AGG - Chr3:98120569-98120588 MsG0380017585.01.T01:intron 30.0%
!! GTTCGATTTTAAAAAAGAGG+GGG + Chr3:98122092-98122111 None:intergenic 30.0%
!! TTAAGTTGGAATCCTAAAGA+AGG + Chr3:98125624-98125643 None:intergenic 30.0%
!! TTACATACCTTTGGAATTGA+AGG + Chr3:98121430-98121449 None:intergenic 30.0%
!!! ACGCATTTTAATGGTGTTAT+CGG - Chr3:98123313-98123332 MsG0380017585.01.T01:intron 30.0%
!!! AGAGATGTTTTAAAGTTTGG+CGG + Chr3:98120127-98120146 None:intergenic 30.0%
!!! ATGTTTTGATTGAGTTTGGT+GGG + Chr3:98118960-98118979 None:intergenic 30.0%
!!! ATTAAGGGTCTTTTTTGGAT+TGG + Chr3:98121975-98121994 None:intergenic 30.0%
!!! CACAAATTAAGGGTCTTTTT+TGG + Chr3:98121980-98121999 None:intergenic 30.0%
!!! GATACCTAAACTCACTTTTT+TGG - Chr3:98122242-98122261 MsG0380017585.01.T01:intron 30.0%
!!! TTTTGTGCTGCTTGTTTTTT+AGG - Chr3:98123149-98123168 MsG0380017585.01.T01:intron 30.0%
!!! TTTTTTAGGTCAGGAAGTAT+AGG - Chr3:98123163-98123182 MsG0380017585.01.T01:intron 30.0%
AAAATGACATTCCAGGTCTA+GGG - Chr3:98124852-98124871 MsG0380017585.01.T01:intron 35.0%
AAACATGATGAATACGCTTG+AGG + Chr3:98123471-98123490 None:intergenic 35.0%
AAACTTTGCTACATTCTTGG+GGG - Chr3:98118798-98118817 MsG0380017585.01.T01:three_prime_UTR 35.0%
AACGATGAGGACTAAAATTG+GGG - Chr3:98119810-98119829 MsG0380017585.01.T01:intron 35.0%
AACGGTGCAACAAATTGAAA+CGG + Chr3:98124529-98124548 None:intergenic 35.0%
AAGCATATTCGGCTATTAGA+TGG - Chr3:98119516-98119535 MsG0380017585.01.T01:intron 35.0%
AATCAAAACATGGGAAGACA+TGG - Chr3:98118969-98118988 MsG0380017585.01.T01:exon 35.0%
AATTCGACTGAGGAAATCAA+AGG - Chr3:98119545-98119564 MsG0380017585.01.T01:CDS 35.0%
AATTGGGGACGTAAAAGTTT+AGG - Chr3:98119825-98119844 MsG0380017585.01.T01:intron 35.0%
ACCTTCAAATATTGATGTCC+CGG + Chr3:98125990-98126009 None:intergenic 35.0%
AGAAGATTTATTGTGCAGTG+CGG - Chr3:98118850-98118869 MsG0380017585.01.T01:three_prime_UTR 35.0%
ATAAATGCAGTGAAGAAGCT+TGG - Chr3:98125363-98125382 MsG0380017585.01.T01:intron 35.0%
ATATAAGATGAGCTGGGAAA+TGG + Chr3:98124080-98124099 None:intergenic 35.0%
ATTATATGGGTCTTCAACTC+AGG + Chr3:98123011-98123030 None:intergenic 35.0%
ATTGTATCAGCTATGAGGTT+GGG + Chr3:98118667-98118686 None:intergenic 35.0%
CAAACTTTGCTACATTCTTG+GGG - Chr3:98118797-98118816 MsG0380017585.01.T01:three_prime_UTR 35.0%
CAACTGTATTTGCATTGCAA+TGG - Chr3:98125779-98125798 MsG0380017585.01.T01:intron 35.0%
CAAGAGAATGAAATTGAAGG+AGG + Chr3:98121458-98121477 None:intergenic 35.0%
CAATTAAGCAATGCATGCTT+TGG - Chr3:98119664-98119683 MsG0380017585.01.T01:intron 35.0%
CACCAAACTCAATCAAAACA+TGG - Chr3:98118959-98118978 MsG0380017585.01.T01:exon 35.0%
CACCATTAAAATGCGTTGAA+AGG + Chr3:98123309-98123328 None:intergenic 35.0%
CACTATGAGAAAAACCACAA+CGG + Chr3:98120429-98120448 None:intergenic 35.0%
CAGCATCAAGTCACAAATTA+AGG + Chr3:98121991-98122010 None:intergenic 35.0%
CATTCTCATTGAGTTATGCA+CGG - Chr3:98124910-98124929 MsG0380017585.01.T01:intron 35.0%
CATTGCAATGCAAATACAGT+TGG + Chr3:98125781-98125800 None:intergenic 35.0%
CCAAACTTTGCTACATTCTT+GGG - Chr3:98118796-98118815 MsG0380017585.01.T01:three_prime_UTR 35.0%
CGGAGGTAATGAAATTGAAT+AGG - Chr3:98120364-98120383 MsG0380017585.01.T01:intron 35.0%
CTCATAGCTGATACAATCAA+GGG - Chr3:98118670-98118689 MsG0380017585.01.T01:three_prime_UTR 35.0%
CTTATGAAGATCCACTCAAA+AGG - Chr3:98119641-98119660 MsG0380017585.01.T01:intron 35.0%
GAAAATAAATGTGCTAACCG+AGG - Chr3:98119264-98119283 MsG0380017585.01.T01:CDS 35.0%
GAACATATAAGCAACCTGAA+CGG - Chr3:98124438-98124457 MsG0380017585.01.T01:intron 35.0%
GAATTATGTTGTACTCGAGA+AGG - Chr3:98125851-98125870 MsG0380017585.01.T01:intron 35.0%
GATCTATGAATAATCCCACA+TGG + Chr3:98123265-98123284 None:intergenic 35.0%
GCCTTTGACATAACAAAAGT+TGG - Chr3:98119465-98119484 MsG0380017585.01.T01:intron 35.0%
GGCCATTATGTCTTTAATCT+CGG - Chr3:98121603-98121622 MsG0380017585.01.T01:intron 35.0%
GTAATTCCAGAGACAAGATA+CGG + Chr3:98121260-98121279 None:intergenic 35.0%
GTATTTGCATTGCAATGGAT+GGG - Chr3:98125784-98125803 MsG0380017585.01.T01:intron 35.0%
GTTATACTCAATAGTTGACG+TGG - Chr3:98121047-98121066 MsG0380017585.01.T01:intron 35.0%
GTTGAAGACCCATATAATAC+CGG - Chr3:98123013-98123032 MsG0380017585.01.T01:CDS 35.0%
TAAAATGACATTCCAGGTCT+AGG - Chr3:98124851-98124870 MsG0380017585.01.T01:intron 35.0%
TAATTCCAGAGACAAGATAC+GGG + Chr3:98121259-98121278 None:intergenic 35.0%
TACGGAAAAATATTCAAGCG+TGG - Chr3:98125297-98125316 MsG0380017585.01.T01:intron 35.0%
TCATAGCTGATACAATCAAG+GGG - Chr3:98118671-98118690 MsG0380017585.01.T01:three_prime_UTR 35.0%
TCATAGTCTAATTGGAGAAC+AGG + Chr3:98119979-98119998 None:intergenic 35.0%
TCCAAACTTTGCTACATTCT+TGG - Chr3:98118795-98118814 MsG0380017585.01.T01:three_prime_UTR 35.0%
TGACATGAACAAAATTCTGG+TGG - Chr3:98118923-98118942 MsG0380017585.01.T01:three_prime_UTR 35.0%
TGATACCATGACTATCTCTA+TGG + Chr3:98119720-98119739 None:intergenic 35.0%
TGCATTACAGTCTTCATTCA+TGG - Chr3:98120227-98120246 MsG0380017585.01.T01:intron 35.0%
TGCGATTAAGCTGATTGATT+TGG - Chr3:98123836-98123855 MsG0380017585.01.T01:intron 35.0%
TGGAAAGGAATAGGTATCAA+TGG + Chr3:98119696-98119715 None:intergenic 35.0%
TGTATTTGCATTGCAATGGA+TGG - Chr3:98125783-98125802 MsG0380017585.01.T01:intron 35.0%
TGTCAGTCATTACAGTACAA+AGG + Chr3:98124144-98124163 None:intergenic 35.0%
TGTGGGATTATTCATAGATC+TGG - Chr3:98123265-98123284 MsG0380017585.01.T01:intron 35.0%
TTAATGTGTGTTTGCTTCAC+TGG - Chr3:98121725-98121744 MsG0380017585.01.T01:CDS 35.0%
TTGAAGACCCATATAATACC+GGG - Chr3:98123014-98123033 MsG0380017585.01.T01:CDS 35.0%
TTGTAGAAACAATGGAGCTA+TGG + Chr3:98123887-98123906 None:intergenic 35.0%
! AAGCGAAGTGCTATATAGTA+CGG - Chr3:98124384-98124403 MsG0380017585.01.T01:intron 35.0%
! AGCGCTAAAAATCACCATTT+TGG + Chr3:98122185-98122204 None:intergenic 35.0%
! CATGAGAGCACAATCAAAAT+TGG + Chr3:98124179-98124198 None:intergenic 35.0%
! CGCTAAAAATCACCATTTTG+GGG + Chr3:98122183-98122202 None:intergenic 35.0%
! CTTTTTCTTGTACACTTTGG+TGG - Chr3:98124221-98124240 MsG0380017585.01.T01:intron 35.0%
! GCGCTAAAAATCACCATTTT+GGG + Chr3:98122184-98122203 None:intergenic 35.0%
! GCTAAAAATCACCATTTTGG+GGG + Chr3:98122182-98122201 None:intergenic 35.0%
! GTTTTCCATCTATCAGATGT+AGG - Chr3:98124936-98124955 MsG0380017585.01.T01:intron 35.0%
! GTTTTTCGCCCTAAAAATTG+TGG + Chr3:98122278-98122297 None:intergenic 35.0%
! TAAATAGTTCTGTTCTCCAC+CGG - Chr3:98123108-98123127 MsG0380017585.01.T01:intron 35.0%
! TAACTGTGGAACTTTTGACA+GGG - Chr3:98124995-98125014 MsG0380017585.01.T01:intron 35.0%
! TGCATCTAAAATGACATTCC+AGG - Chr3:98124845-98124864 MsG0380017585.01.T01:intron 35.0%
! TTGCTTAATTGCCTTTTGAG+TGG + Chr3:98119655-98119674 None:intergenic 35.0%
!! ATAGCTCCATTGTTTCTACA+AGG - Chr3:98123886-98123905 MsG0380017585.01.T01:intron 35.0%
!! ATGTAGGCATGTTTTGAATC+TGG - Chr3:98124952-98124971 MsG0380017585.01.T01:intron 35.0%
!! ATTTTGGGGGCAAAAAAGAT+GGG + Chr3:98122169-98122188 None:intergenic 35.0%
!! GCCAACTTTTGTTATGTCAA+AGG + Chr3:98119469-98119488 None:intergenic 35.0%
!! TAAGTTATGAAGCATTGACC+AGG - Chr3:98125193-98125212 MsG0380017585.01.T01:intron 35.0%
!! TTTTGATTGTGCTCTCATGA+TGG - Chr3:98124180-98124199 MsG0380017585.01.T01:intron 35.0%
!!! AAATGGGACCATGTTTTAGT+TGG + Chr3:98119752-98119771 None:intergenic 35.0%
!!! AGGCATTTGGCTTTTTAAGT+TGG + Chr3:98125638-98125657 None:intergenic 35.0%
!!! CATGTTTTGATTGAGTTTGG+TGG + Chr3:98118961-98118980 None:intergenic 35.0%
!!! GCTTATCGACTTTTTGGAAA+AGG - Chr3:98119917-98119936 MsG0380017585.01.T01:intron 35.0%
!!! GTATATTTTCTGGCTTCAGT+CGG + Chr3:98123649-98123668 None:intergenic 35.0%
!!! GTCCACCGGTTTTTTTTTTT+TGG - Chr3:98120504-98120523 MsG0380017585.01.T01:intron 35.0%
!!! TAAGAGGCTTATCGACTTTT+TGG - Chr3:98119911-98119930 MsG0380017585.01.T01:intron 35.0%
!!! TCCCATGTTTTGATTGAGTT+TGG + Chr3:98118964-98118983 None:intergenic 35.0%
!!! TGGTTTTAGCATTCTAACTG+TGG - Chr3:98124981-98125000 MsG0380017585.01.T01:intron 35.0%
AAAGGATACCTGCTAGAGTT+TGG - Chr3:98122798-98122817 MsG0380017585.01.T01:intron 40.0%
AACAAAGATACACTGCAACC+TGG + Chr3:98123555-98123574 None:intergenic 40.0%
AATAAGCTGAAAACAGCTCG+TGG - Chr3:98121873-98121892 MsG0380017585.01.T01:intron 40.0%
AATTCACGAACAAGATCCAC+AGG + Chr3:98123400-98123419 None:intergenic 40.0%
AATTGAACCCTAACTCCCAA+CGG - Chr3:98121192-98121211 MsG0380017585.01.T01:intron 40.0%
ACAAAGATACACTGCAACCT+GGG + Chr3:98123554-98123573 None:intergenic 40.0%
ACATGCCTACATCTGATAGA+TGG + Chr3:98124944-98124963 None:intergenic 40.0%
ACCATGACTATCTCTATGGT+TGG + Chr3:98119716-98119735 None:intergenic 40.0%
ACCGGGACATCAATATTTGA+AGG - Chr3:98125986-98126005 MsG0380017585.01.T01:CDS 40.0%
ACGAAGGATAGTGAGATTTC+TGG - Chr3:98120303-98120322 MsG0380017585.01.T01:intron 40.0%
AGAACAAGAAGACTATGTGC+CGG + Chr3:98123130-98123149 None:intergenic 40.0%
AGAATAAACCGTTGGGAGTT+AGG + Chr3:98121203-98121222 None:intergenic 40.0%
AGCTTAATCGCACTAGACTT+AGG + Chr3:98123828-98123847 None:intergenic 40.0%
AGGTTGCAGTGTATCTTTGT+TGG - Chr3:98123554-98123573 MsG0380017585.01.T01:intron 40.0%
AGTTGTGGCGAATATGAAGA+TGG + Chr3:98121288-98121307 None:intergenic 40.0%
ATAAATACTGCCCATTCCTG+TGG - Chr3:98123381-98123400 MsG0380017585.01.T01:intron 40.0%
ATCAGTAACCAAACTCTAGC+AGG + Chr3:98122809-98122828 None:intergenic 40.0%
ATGGAGCTATGGATCTGATT+TGG + Chr3:98123876-98123895 None:intergenic 40.0%
ATGGTCAGAAAATTCGACTG+AGG - Chr3:98119535-98119554 MsG0380017585.01.T01:CDS 40.0%
ATGTACACACATGTCCATGT+GGG - Chr3:98123248-98123267 MsG0380017585.01.T01:intron 40.0%
ATTAAGGTCATCCAAAGGGA+AGG - Chr3:98119410-98119429 MsG0380017585.01.T01:intron 40.0%
ATTCTCAGCAAAATGGGTGA+AGG - Chr3:98122496-98122515 MsG0380017585.01.T01:intron 40.0%
CAAAACCTCCAGAAAATGTG+TGG - Chr3:98118590-98118609 MsG0380017585.01.T01:three_prime_UTR 40.0%
CAGAGATTATGTAGCGATCA+AGG - Chr3:98122643-98122662 MsG0380017585.01.T01:intron 40.0%
CCCAAGAATGTAGCAAAGTT+TGG + Chr3:98118799-98118818 None:intergenic 40.0%
CCTCATAGCTGATACAATCA+AGG - Chr3:98118669-98118688 MsG0380017585.01.T01:three_prime_UTR 40.0%
CCTTGATTGTATCAGCTATG+AGG + Chr3:98118672-98118691 None:intergenic 40.0%
CGCCGAGATTAAAGACATAA+TGG + Chr3:98121608-98121627 None:intergenic 40.0%
CGGTTCTATGTATACTCTTC+AGG + Chr3:98119229-98119248 None:intergenic 40.0%
CTAAAATGGGGTCGTTAGAT+TGG - Chr3:98118748-98118767 MsG0380017585.01.T01:three_prime_UTR 40.0%
CTCTATGGTTGGAAAGGAAT+AGG + Chr3:98119705-98119724 None:intergenic 40.0%
CTCTTGATCATCCCTTCTTT+AGG - Chr3:98125609-98125628 MsG0380017585.01.T01:intron 40.0%
CTGAGGAAATCAAAGGCAAA+TGG - Chr3:98119552-98119571 MsG0380017585.01.T01:CDS 40.0%
CTTGATCGCTACATAATCTC+TGG + Chr3:98122645-98122664 None:intergenic 40.0%
GAATAAACCGTTGGGAGTTA+GGG + Chr3:98121202-98121221 None:intergenic 40.0%
GACTATCTCTATGGTTGGAA+AGG + Chr3:98119711-98119730 None:intergenic 40.0%
GAGAACCAGAATAAACCGTT+GGG + Chr3:98121210-98121229 None:intergenic 40.0%
GATCTTTGAACCATATGCTC+TGG + Chr3:98125091-98125110 None:intergenic 40.0%
GATTGTATCAGCTATGAGGT+TGG + Chr3:98118668-98118687 None:intergenic 40.0%
GCTAAATAGTACGGAACTTG+TGG + Chr3:98124762-98124781 None:intergenic 40.0%
GGTTGCAGTGTATCTTTGTT+GGG - Chr3:98123555-98123574 MsG0380017585.01.T01:intron 40.0%
GTGGATCTTGTTCGTGAATT+TGG - Chr3:98123400-98123419 MsG0380017585.01.T01:intron 40.0%
GTGTGTGCAATTATTGATGG+TGG - Chr3:98120456-98120475 MsG0380017585.01.T01:intron 40.0%
TAACTCCCAACGGTTTATTC+TGG - Chr3:98121202-98121221 MsG0380017585.01.T01:intron 40.0%
TATGTACACACATGTCCATG+TGG - Chr3:98123247-98123266 MsG0380017585.01.T01:intron 40.0%
TCAAATATTGATGTCCCGGT+AGG + Chr3:98125986-98126005 None:intergenic 40.0%
TCATAGATCTGGAAACTGAG+TGG - Chr3:98123276-98123295 MsG0380017585.01.T01:intron 40.0%
TCCAACCATAGAGATAGTCA+TGG - Chr3:98119712-98119731 MsG0380017585.01.T01:CDS 40.0%
TCGTTACCTAGATAACCTCA+GGG + Chr3:98123923-98123942 None:intergenic 40.0%
TCTGCGATTGAAATAAGGTG+TGG + Chr3:98119297-98119316 None:intergenic 40.0%
TGACGTTGAATATGCGTCAA+TGG - Chr3:98119139-98119158 MsG0380017585.01.T01:intron 40.0%
TTAGGGCGAAAAACATGATG+CGG - Chr3:98122284-98122303 MsG0380017585.01.T01:intron 40.0%
TTAGTACAGTACCATAGGTG+TGG + Chr3:98120607-98120626 None:intergenic 40.0%
TTCGTTACCTAGATAACCTC+AGG + Chr3:98123924-98123943 None:intergenic 40.0%
TTGCTTCACAATATCTCGCA+GGG - Chr3:98125273-98125292 MsG0380017585.01.T01:intron 40.0%
TTTGCTTCACAATATCTCGC+AGG - Chr3:98125272-98125291 MsG0380017585.01.T01:intron 40.0%
! AGATTGGTTCCTCTGTTTAG+AGG - Chr3:98118764-98118783 MsG0380017585.01.T01:three_prime_UTR 40.0%
! AGCGAAGTGCTATATAGTAC+GGG - Chr3:98124385-98124404 MsG0380017585.01.T01:intron 40.0%
! AGCTTCTAGTGTAAGGTACT+TGG - Chr3:98123692-98123711 MsG0380017585.01.T01:intron 40.0%
! AGGATAGTGAGATTTCTGGA+AGG - Chr3:98120307-98120326 MsG0380017585.01.T01:intron 40.0%
! AGTTTGGCCTTCTGATGAAT+CGG + Chr3:98119439-98119458 None:intergenic 40.0%
! CGTTGTGGTTTTTCTCATAG+TGG - Chr3:98120427-98120446 MsG0380017585.01.T01:intron 40.0%
! CTAACTGTGGAACTTTTGAC+AGG - Chr3:98124994-98125013 MsG0380017585.01.T01:intron 40.0%
! CTGTACTAAGTATTGCCCTT+TGG - Chr3:98120618-98120637 MsG0380017585.01.T01:intron 40.0%
! GAAGAAGCTTGGTGATCTTA+AGG - Chr3:98125374-98125393 MsG0380017585.01.T01:intron 40.0%
! GCCCTAAAAATTGTGGCTTT+TGG + Chr3:98122271-98122290 None:intergenic 40.0%
! GGGTGTCATCATTCATGATT+GGG - Chr3:98123074-98123093 MsG0380017585.01.T01:CDS 40.0%
! TAGCCTGTCCGTGAATTTTT+CGG - Chr3:98124735-98124754 MsG0380017585.01.T01:intron 40.0%
! TCATGAAAATTTGGAGCACC+TGG - Chr3:98125036-98125055 MsG0380017585.01.T01:intron 40.0%
! TGAATTTGGACGACAGCTTT+TGG - Chr3:98123414-98123433 MsG0380017585.01.T01:intron 40.0%
! TGGGTGTCATCATTCATGAT+TGG - Chr3:98123073-98123092 MsG0380017585.01.T01:CDS 40.0%
! TGTCAAAGGCATGTTCAGTT+TGG + Chr3:98119455-98119474 None:intergenic 40.0%
! TTATCGGTCTTTGAGAAGCT+TGG - Chr3:98123329-98123348 MsG0380017585.01.T01:intron 40.0%
! TTTGATTGAGTTTGGTGGGA+GGG + Chr3:98118956-98118975 None:intergenic 40.0%
!! AAAAGAGGGGGCTATTTTCA+TGG + Chr3:98122080-98122099 None:intergenic 40.0%
!! AAAGAGGGGGCTATTTTCAT+GGG + Chr3:98122079-98122098 None:intergenic 40.0%
!! ACCTCTAAGACAACAAGTGT+TGG - Chr3:98118639-98118658 MsG0380017585.01.T01:three_prime_UTR 40.0%
!! CACACATTTTCTGGAGGTTT+TGG + Chr3:98118592-98118611 None:intergenic 40.0%
!! CATACCTTTGGAATTGAAGG+AGG + Chr3:98121427-98121446 None:intergenic 40.0%
!! CATTTTGGGGGCAAAAAAGA+TGG + Chr3:98122170-98122189 None:intergenic 40.0%
!! GCAATGATGGAGAGAGTTTT+GGG - Chr3:98125058-98125077 MsG0380017585.01.T01:intron 40.0%
!! TCCAACACTTGTTGTCTTAG+AGG + Chr3:98118643-98118662 None:intergenic 40.0%
!! TCCTGAATTGGTTCGATTAC+CGG - Chr3:98122884-98122903 MsG0380017585.01.T01:intron 40.0%
!! TGGTCCACCGGTTTAAAATT+AGG - Chr3:98120532-98120551 MsG0380017585.01.T01:intron 40.0%
!! TGTTTTGAATCTGGAACAGC+TGG - Chr3:98124961-98124980 MsG0380017585.01.T01:intron 40.0%
!! TTTTGATTGAGTTTGGTGGG+AGG + Chr3:98118957-98118976 None:intergenic 40.0%
!!! CATCTTTTTTGCCCCCAAAA+TGG - Chr3:98122168-98122187 MsG0380017585.01.T01:intron 40.0%
!!! TGCTGCTTGTTTTTTAGGTC+AGG - Chr3:98123154-98123173 MsG0380017585.01.T01:intron 40.0%
!!! TGTTGGCTTGATTGCACTTT+TGG - Chr3:98122037-98122056 MsG0380017585.01.T01:CDS 40.0%
AAACTCTCTCCATCATTGCC+AGG + Chr3:98125057-98125076 None:intergenic 45.0%
AAGACCCATATAATACCGGG+TGG - Chr3:98123017-98123036 MsG0380017585.01.T01:CDS 45.0%
AAGGAGACAAGCAATGTGTG+AGG - Chr3:98120326-98120345 MsG0380017585.01.T01:intron 45.0%
ACATTCCAAAACTCGACCGA+AGG + Chr3:98122609-98122628 None:intergenic 45.0%
ACCAACCACTGCCAAATTTC+TGG + Chr3:98121526-98121545 None:intergenic 45.0%
ACGAACAAGATCCACAGGAA+TGG + Chr3:98123395-98123414 None:intergenic 45.0%
ACGTCTTGTGAAGAGTGATG+TGG - Chr3:98122724-98122743 MsG0380017585.01.T01:intron 45.0%
AGAAGGGATGATCAAGAGCT+TGG + Chr3:98125607-98125626 None:intergenic 45.0%
AGTCGTCGGAAACTGTTAGA+GGG + Chr3:98120078-98120097 None:intergenic 45.0%
AGTTTGGCGGTGTAAATCCA+AGG + Chr3:98120114-98120133 None:intergenic 45.0%
CCAACACTCCACAAATCACA+TGG + Chr3:98124887-98124906 None:intergenic 45.0%
CCAACCACTGCCAAATTTCT+GGG + Chr3:98121525-98121544 None:intergenic 45.0%
CGAACAAGATCCACAGGAAT+GGG + Chr3:98123394-98123413 None:intergenic 45.0%
CGTCTTGTGAAGAGTGATGT+GGG - Chr3:98122725-98122744 MsG0380017585.01.T01:intron 45.0%
CGTTACCTAGATAACCTCAG+GGG + Chr3:98123922-98123941 None:intergenic 45.0%
CTCATTGAGTTATGCACGGT+TGG - Chr3:98124914-98124933 MsG0380017585.01.T01:intron 45.0%
CTGTGTCGTCTGTGTAAGAA+CGG + Chr3:98121232-98121251 None:intergenic 45.0%
CTTGTGGCCCGAAAAATTCA+CGG + Chr3:98124746-98124765 None:intergenic 45.0%
GCAAAATGGGTGAAGGTTAG+CGG - Chr3:98122503-98122522 MsG0380017585.01.T01:intron 45.0%
GCTGTGTACAGATCCTGAAT+TGG - Chr3:98122872-98122891 MsG0380017585.01.T01:intron 45.0%
GGAAGTTGGCAAATAGGCTA+TGG - Chr3:98118819-98118838 MsG0380017585.01.T01:three_prime_UTR 45.0%
GGAGAACCAGAATAAACCGT+TGG + Chr3:98121211-98121230 None:intergenic 45.0%
GGTCATCTCCATGTGATTTG+TGG - Chr3:98124876-98124895 MsG0380017585.01.T01:intron 45.0%
GTCAAGAACGACATTTGCTC+TGG + Chr3:98123984-98124003 None:intergenic 45.0%
TACAGTACCATAGGTGTGGT+TGG + Chr3:98120603-98120622 None:intergenic 45.0%
TAGGGCGAAAAACATGATGC+GGG - Chr3:98122285-98122304 MsG0380017585.01.T01:intron 45.0%
TAGTCGTCGGAAACTGTTAG+AGG + Chr3:98120079-98120098 None:intergenic 45.0%
TCATGGAAAGGGAACGAACT+CGG - Chr3:98121362-98121381 MsG0380017585.01.T01:intron 45.0%
TCCACCTCCTTCAATTCCAA+AGG - Chr3:98121420-98121439 MsG0380017585.01.T01:intron 45.0%
TCCGGTAATCGAACCAATTC+AGG + Chr3:98122888-98122907 None:intergenic 45.0%
TGAACCATATGCTCTGGTAG+AGG + Chr3:98125085-98125104 None:intergenic 45.0%
TGCTTCACAATATCTCGCAG+GGG - Chr3:98125274-98125293 MsG0380017585.01.T01:intron 45.0%
TGGAATCTGTAGCATGTCTG+TGG - Chr3:98123434-98123453 MsG0380017585.01.T01:intron 45.0%
TGGGACAAACTAAGCAGCTA+AGG + Chr3:98123535-98123554 None:intergenic 45.0%
TTCATTACCTCCGTAACACC+AGG + Chr3:98120357-98120376 None:intergenic 45.0%
TTTGCATTGCAATGGATGGG+TGG - Chr3:98125787-98125806 MsG0380017585.01.T01:intron 45.0%
! AGATACTGTTGCTTAGGTGC+TGG - Chr3:98119949-98119968 MsG0380017585.01.T01:intron 45.0%
! AGCCTGTCCGTGAATTTTTC+GGG - Chr3:98124736-98124755 MsG0380017585.01.T01:intron 45.0%
! CCATGTGATTTGTGGAGTGT+TGG - Chr3:98124884-98124903 MsG0380017585.01.T01:intron 45.0%
!! AAGGACACCGATTCATCAGA+AGG - Chr3:98119429-98119448 MsG0380017585.01.T01:intron 45.0%
!! AATTTGGCAGTGGTTGGTGA+CGG - Chr3:98121528-98121547 MsG0380017585.01.T01:intron 45.0%
!! ACCTTTGGAATTGAAGGAGG+TGG + Chr3:98121424-98121443 None:intergenic 45.0%
!! ATATCATTCAGAGGGCACTC+TGG - Chr3:98125951-98125970 MsG0380017585.01.T01:CDS 45.0%
!! GGCAATGATGGAGAGAGTTT+TGG - Chr3:98125057-98125076 MsG0380017585.01.T01:intron 45.0%
!! GTGCAATTATTGATGGTGGC+TGG - Chr3:98120460-98120479 MsG0380017585.01.T01:intron 45.0%
!! GTGCTGACCACCTTTTTCTT+TGG + Chr3:98124507-98124526 None:intergenic 45.0%
!! TTAGCTGCTTAGTTTGTCCC+AGG - Chr3:98123534-98123553 MsG0380017585.01.T01:intron 45.0%
!! TTTTTGGAAGTGTGGTCCAC+CGG - Chr3:98120520-98120539 MsG0380017585.01.T01:intron 45.0%
!!! CGGTCGAGTTTTGGAATGTT+GGG - Chr3:98122610-98122629 MsG0380017585.01.T01:intron 45.0%
!!! TCGGTCGAGTTTTGGAATGT+TGG - Chr3:98122609-98122628 MsG0380017585.01.T01:intron 45.0%
!! CTATTAATTAAAAAAAATTA+TGG + Chr3:98120889-98120908 None:intergenic 5.0%
AACGGAACACCACTCTTCAC+CGG + Chr3:98120411-98120430 None:intergenic 50.0%
ACAAGAAGACTATGTGCCGG+TGG + Chr3:98123127-98123146 None:intergenic 50.0%
ACCCATATAATACCGGGTGG+TGG - Chr3:98123020-98123039 MsG0380017585.01.T01:CDS 50.0%
AGAAGAGACGACGATCGTGA+TGG - Chr3:98121582-98121601 MsG0380017585.01.T01:intron 50.0%
AGAGTGATGTGGGATGCTCA+CGG - Chr3:98122735-98122754 MsG0380017585.01.T01:intron 50.0%
AGCGTGGATCACGACTAAGA+TGG - Chr3:98125313-98125332 MsG0380017585.01.T01:intron 50.0%
AGGGCGAAAAACATGATGCG+GGG - Chr3:98122286-98122305 MsG0380017585.01.T01:intron 50.0%
ATGACATTCCAGGTCTAGGG+TGG - Chr3:98124855-98124874 MsG0380017585.01.T01:intron 50.0%
CACAATATCTCGCAGGGGTA+CGG - Chr3:98125279-98125298 MsG0380017585.01.T01:intron 50.0%
CACGTCATGTTGAGTCGTCA+AGG - Chr3:98125516-98125535 MsG0380017585.01.T01:intron 50.0%
CAGAGATGTGATGCAGCTAC+TGG + Chr3:98124040-98124059 None:intergenic 50.0%
CAGTAGCTGCATCACATCTC+TGG - Chr3:98124038-98124057 MsG0380017585.01.T01:intron 50.0%
CCATATAATACCGGGTGGTG+GGG - Chr3:98123022-98123041 MsG0380017585.01.T01:CDS 50.0%
CCCACCACCCGGTATTATAT+GGG + Chr3:98123024-98123043 None:intergenic 50.0%
CCCAGAAATTTGGCAGTGGT+TGG - Chr3:98121522-98121541 MsG0380017585.01.T01:intron 50.0%
CCCATATAATACCGGGTGGT+GGG - Chr3:98123021-98123040 MsG0380017585.01.T01:CDS 50.0%
CGAGCAGTAATGCGATTGGA+TGG + Chr3:98125584-98125603 None:intergenic 50.0%
CGTTCTTACACAGACGACAC+AGG - Chr3:98121230-98121249 MsG0380017585.01.T01:intron 50.0%
CTCCCTTGAAACAGCTCCTT+CGG + Chr3:98125340-98125359 None:intergenic 50.0%
CTCTGGTAAGCAATGCCTAC+CGG - Chr3:98125968-98125987 MsG0380017585.01.T01:CDS 50.0%
CTTGGGGGAAGTTGGCAAAT+AGG - Chr3:98118813-98118832 MsG0380017585.01.T01:three_prime_UTR 50.0%
GACAGTACCAACCACACCTA+TGG - Chr3:98120593-98120612 MsG0380017585.01.T01:intron 50.0%
GACTAAGAAGAACGCCACCT+TGG - Chr3:98120094-98120113 MsG0380017585.01.T01:intron 50.0%
GATTCCTCATGGAAGACGAC+AGG - Chr3:98120482-98120501 MsG0380017585.01.T01:intron 50.0%
GCTACATTCTTGGGGGAAGT+TGG - Chr3:98118805-98118824 MsG0380017585.01.T01:three_prime_UTR 50.0%
GGAATCCCGTATCTTGTCTC+TGG - Chr3:98121251-98121270 MsG0380017585.01.T01:intron 50.0%
GGTACCCAGAAATTTGGCAG+TGG - Chr3:98121518-98121537 MsG0380017585.01.T01:intron 50.0%
GTACTCGAGAAGGCTTGAGA+AGG - Chr3:98125861-98125880 MsG0380017585.01.T01:intron 50.0%
GTGGCGTTCTTCTTAGTCGT+CGG + Chr3:98120092-98120111 None:intergenic 50.0%
TAAGGTGTGGACATCTCCCT+CGG + Chr3:98119284-98119303 None:intergenic 50.0%
TAGAGCCCCTGAGGTTATCT+AGG - Chr3:98123914-98123933 MsG0380017585.01.T01:intron 50.0%
TCACGATCGTCGTCTCTTCT+TGG + Chr3:98121582-98121601 None:intergenic 50.0%
TCAGCTTTACGACGAAGAGC+CGG - Chr3:98120389-98120408 MsG0380017585.01.T01:intron 50.0%
TCCCTTGAAACAGCTCCTTC+GGG + Chr3:98125339-98125358 None:intergenic 50.0%
TCTGGTAAGCAATGCCTACC+GGG - Chr3:98125969-98125988 MsG0380017585.01.T01:CDS 50.0%
TGAAGAGTGGTGTTCCGTTG+TGG - Chr3:98120412-98120431 MsG0380017585.01.T01:intron 50.0%
TGGGGGCAAAAAAGATGGGT+TGG + Chr3:98122165-98122184 None:intergenic 50.0%
TTATTGTGCAGTGCGGTGAG+AGG - Chr3:98118857-98118876 MsG0380017585.01.T01:three_prime_UTR 50.0%
TTCACGGACAGGCTAAACAG+CGG + Chr3:98124730-98124749 None:intergenic 50.0%
TTGGCGAGCAGTAATGCGAT+TGG + Chr3:98125588-98125607 None:intergenic 50.0%
TTGGCGGTGTAAATCCAAGG+TGG + Chr3:98120111-98120130 None:intergenic 50.0%
! AAGGCATTATAGAGCCCCTG+AGG - Chr3:98123905-98123924 MsG0380017585.01.T01:intron 50.0%
! CTGTGGAACTTTTGACAGGG+AGG - Chr3:98124998-98125017 MsG0380017585.01.T01:intron 50.0%
! GGGGGCAAAAAAGATGGGTT+GGG + Chr3:98122164-98122183 None:intergenic 50.0%
! TGAATCGGTGTCCTTCCCTT+TGG + Chr3:98119424-98119443 None:intergenic 50.0%
! TGAGGCATGTCCTGGTGTTA+CGG - Chr3:98120344-98120363 MsG0380017585.01.T01:intron 50.0%
! TTTGGAGCACCTGGCAATGA+TGG - Chr3:98125045-98125064 MsG0380017585.01.T01:intron 50.0%
!!! TTTTCTGGCTTCAGTCGGTG+TGG + Chr3:98123644-98123663 None:intergenic 50.0%
ATGAGCTGGGAAATGGTCGC+TGG + Chr3:98124073-98124092 None:intergenic 55.0%
ATGGAAGACGACAGGTCCAC+CGG - Chr3:98120490-98120509 MsG0380017585.01.T01:intron 55.0%
CCCCACCACCCGGTATTATA+TGG + Chr3:98123025-98123044 None:intergenic 55.0%
CGATCGTCGTCTCTTCTTGG+AGG + Chr3:98121579-98121598 None:intergenic 55.0%
GAAACGACCTCGTCTCGCTT+GGG - Chr3:98121384-98121403 MsG0380017585.01.T01:intron 55.0%
GCAATGTGTGAGGCATGTCC+TGG - Chr3:98120336-98120355 MsG0380017585.01.T01:intron 55.0%
GCTAGTGCTGTAGGCACCTT+CGG - Chr3:98122590-98122609 MsG0380017585.01.T01:intron 55.0%
GGCCCGAAAAATTCACGGAC+AGG + Chr3:98124741-98124760 None:intergenic 55.0%
GGCTTCAGTCGGTGTGGATT+AGG + Chr3:98123638-98123657 None:intergenic 55.0%
GGGACCTCTACCAGAGCATA+TGG - Chr3:98125078-98125097 MsG0380017585.01.T01:intron 55.0%
TCACGACTAAGATGGCCCGA+AGG - Chr3:98125321-98125340 MsG0380017585.01.T01:intron 55.0%
TCGCGATGCAGCAATGATCG+AGG - Chr3:98122688-98122707 MsG0380017585.01.T01:intron 55.0%
TGAGCTGGGAAATGGTCGCT+GGG + Chr3:98124072-98124091 None:intergenic 55.0%
TGGACCTGTCGTCTTCCATG+AGG + Chr3:98120489-98120508 None:intergenic 55.0%
! AGGCACCTTCGGTCGAGTTT+TGG - Chr3:98122601-98122620 MsG0380017585.01.T01:intron 55.0%
! GATGGTGGCTGGATTCCTCA+TGG - Chr3:98120471-98120490 MsG0380017585.01.T01:intron 55.0%
! GCCCGAAGGAGCTGTTTCAA+GGG - Chr3:98125335-98125354 MsG0380017585.01.T01:intron 55.0%
! TGGCGCCACACATTTTCTGG+AGG + Chr3:98118598-98118617 None:intergenic 55.0%
!! ATAATACCGGGTGGTGGGGT+AGG - Chr3:98123026-98123045 MsG0380017585.01.T01:CDS 55.0%
!! TAATACCGGGTGGTGGGGTA+GGG - Chr3:98123027-98123046 MsG0380017585.01.T01:CDS 55.0%
GACGAAGAGCCGGTGAAGAG+TGG - Chr3:98120399-98120418 MsG0380017585.01.T01:intron 60.0%
GCAGTGCGGTGAGAGGAACT+AGG - Chr3:98118864-98118883 MsG0380017585.01.T01:three_prime_UTR 60.0%
GGAAACGACCTCGTCTCGCT+TGG - Chr3:98121383-98121402 MsG0380017585.01.T01:intron 60.0%
GGAGATGACCACCCTAGACC+TGG + Chr3:98124866-98124885 None:intergenic 60.0%
GGTCTTACCCCGTCTACGAC+TGG + Chr3:98118622-98118641 None:intergenic 60.0%
TTACCCCGTCTACGACTGGC+TGG + Chr3:98118618-98118637 None:intergenic 60.0%
! GGCCCGAAGGAGCTGTTTCA+AGG - Chr3:98125334-98125353 MsG0380017585.01.T01:intron 60.0%
! GGCTGGCGCCACACATTTTC+TGG + Chr3:98118601-98118620 None:intergenic 60.0%
!! AATACCGGGTGGTGGGGTAG+GGG - Chr3:98123028-98123047 MsG0380017585.01.T01:CDS 60.0%
!! GGCATGTCCTGGTGTTACGG+AGG - Chr3:98120347-98120366 MsG0380017585.01.T01:intron 60.0%
!! TTGGCAGTGGTTGGTGACGG+TGG - Chr3:98121531-98121550 MsG0380017585.01.T01:intron 60.0%
CTATCCCCTACCCCACCACC+CGG + Chr3:98123035-98123054 None:intergenic 65.0%
GCTGCATCCCAAGCGAGACG+AGG + Chr3:98121394-98121413 None:intergenic 65.0%
TGGCGCCAGCCAGTCGTAGA+CGG - Chr3:98118610-98118629 MsG0380017585.01.T01:three_prime_UTR 65.0%
GCGCCAGCCAGTCGTAGACG+GGG - Chr3:98118612-98118631 MsG0380017585.01.T01:three_prime_UTR 70.0%
GGCGCCAGCCAGTCGTAGAC+GGG - Chr3:98118611-98118630 MsG0380017585.01.T01:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 98118583 98126038 98118583 ID=MsG0380017585.01;Name=MsG0380017585.01
Chr3 mRNA 98118583 98126038 98118583 ID=MsG0380017585.01.T01;Parent=MsG0380017585.01;Name=MsG0380017585.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0.37|0.55|0.88|1|1|9|395|327
Chr3 exon 98118583 98119115 98118583 ID=MsG0380017585.01.T01:exon:6184;Parent=MsG0380017585.01.T01
Chr3 exon 98119226 98119327 98119226 ID=MsG0380017585.01.T01:exon:6183;Parent=MsG0380017585.01.T01
Chr3 exon 98119522 98119605 98119522 ID=MsG0380017585.01.T01:exon:6182;Parent=MsG0380017585.01.T01
Chr3 exon 98119690 98119754 98119690 ID=MsG0380017585.01.T01:exon:6181;Parent=MsG0380017585.01.T01
Chr3 exon 98121700 98121748 98121700 ID=MsG0380017585.01.T01:exon:6180;Parent=MsG0380017585.01.T01
Chr3 exon 98121879 98122117 98121879 ID=MsG0380017585.01.T01:exon:6179;Parent=MsG0380017585.01.T01
Chr3 exon 98122976 98123102 98122976 ID=MsG0380017585.01.T01:exon:6178;Parent=MsG0380017585.01.T01
Chr3 exon 98123180 98123249 98123180 ID=MsG0380017585.01.T01:exon:6177;Parent=MsG0380017585.01.T01
Chr3 exon 98125929 98126038 98125929 ID=MsG0380017585.01.T01:exon:6176;Parent=MsG0380017585.01.T01
Chr3 CDS 98125929 98126038 98125929 ID=MsG0380017585.01.T01:cds;Parent=MsG0380017585.01.T01
Chr3 CDS 98123180 98123249 98123180 ID=MsG0380017585.01.T01:cds;Parent=MsG0380017585.01.T01
Chr3 CDS 98122976 98123102 98122976 ID=MsG0380017585.01.T01:cds;Parent=MsG0380017585.01.T01
Chr3 CDS 98121879 98122117 98121879 ID=MsG0380017585.01.T01:cds;Parent=MsG0380017585.01.T01
Chr3 CDS 98121700 98121748 98121700 ID=MsG0380017585.01.T01:cds;Parent=MsG0380017585.01.T01
Chr3 CDS 98119690 98119754 98119690 ID=MsG0380017585.01.T01:cds;Parent=MsG0380017585.01.T01
Chr3 CDS 98119522 98119605 98119522 ID=MsG0380017585.01.T01:cds;Parent=MsG0380017585.01.T01
Chr3 CDS 98119226 98119327 98119226 ID=MsG0380017585.01.T01:cds;Parent=MsG0380017585.01.T01
Chr3 CDS 98118978 98119115 98118978 ID=MsG0380017585.01.T01:cds;Parent=MsG0380017585.01.T01
Chr3 three_prime_UTR 98118583 98118977 98118583 ID=MsG0380017585.01.T01:three_prime_utr;Parent=MsG0380017585.01.T01
Gene Sequence

>MsG0380017585.01.T01

ATGTGTCCAAAACCTCCAGAAAATGTGTGGCGCCAGCCAGTCGTAGACGGGGTAAGACCTCTAAGACAACAAGTGTTGGATCCCAACCTCATAGCTGATACAATCAAGGGGGAACGAACTCGGAAACGACCTCGTCTCGCTTGGGATGCAGCTGCAGCTCCACCTCCTTCAATTCCAAAGGTACCCAGAAATTTGGCAGTGGTTGGTGACGGTGGAATCGAAAGAAAGTATGCTTCGCCTCCAAGAAGAGACGACGATCGTGATGGCCATTATGTCTTTAATCTCGGCGAAAATCTCACTCCTAGATCAAAATGGGTGAAGGTTAGCGGTCAAGTGCTCTCTGAATACAAGTTTAAATTTTTATTTGACTCTGCTTGTGTCATTCAGCATGTTGCTAGTGCTGTAGGCACCTTCGGTCGAGTTTTGGAATGTTGGGATCGTCAAACCAGAGATTATGTAGCGATCAAGGTGATTAGAAGCATCAAGAAGTATCGCGATGCAGCAATGATCGAGGTTGATGTGCTTGAACGTCTTGTGAAGAGTGATCTGTGTACAGATCCTGAATTGGTTCGATTACCGGAATCACATATGCATTGTCTAGGGTGGTCATCTCCATGTGATTTGTGGAGTGTTGGATGCATTCTCATTGAGTTATGCACGGGAGGAGCATTGTTTCAGACTCATGAAAATTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCTCTACCAGAGCATATGGGGTACGGAAAAATATTCAAGCGTGGATCACGACTAAGATGGCCCGAAGGAGCTGTTTCAAGGGAGAGCATAAATGCAGTGAAGAAGCTTGGTGATCTTAAGGATATTATATCACGTCATGTTGAGTCGTCAAGGTCCTCATTAACTGATTTGTTGTATGGCTTATTAACATATGAACCATCCAATCGCATTACTGCTCGCCAAGCTCTTGATCATCCCTTCTTTAGGATTCCAACTTAA
Protein sequence

>MsG0380017585.01.T01

MCPKPPENVWRQPVVDGVRPLRQQVLDPNLIADTIKGERTRKRPRLAWDAAAAPPPSIPKVPRNLAVVGDGGIERKYASPPRRDDDRDGHYVFNLGENLTPRSKWVKVSGQVLSEYKFKFLFDSACVIQHVASAVGTFGRVLECWDRQTRDYVAIKVIRSIKKYRDAAMIEVDVLERLVKSDLCTDPELVRLPESHMHCLGWSSPCDLWSVGCILIELCTGGALFQTHENLEHLAMMERVLGPLPEHMGYGKIFKRGSRLRWPEGAVSRESINAVKKLGDLKDIISRHVESSRSSLTDLLYGLLTYEPSNRITARQALDHPFFRIPT*