AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018109.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018109.01.T01 MTR_4g005410 100.000 624 0 0 1 624 1 624 0.0 1288
MsG0480018109.01.T01 MTR_1g108770 28.313 332 212 9 203 526 183 496 1.60e-26 114
MsG0480018109.01.T01 MTR_1g108765 28.012 332 213 9 203 526 180 493 8.96e-26 112
MsG0480018109.01.T01 MTR_0002s0650 28.395 324 211 7 211 529 129 436 1.49e-23 105
MsG0480018109.01.T01 MTR_4g451275 29.180 305 190 7 232 529 151 436 1.12e-22 102
MsG0480018109.01.T01 MTR_7g033765 26.722 363 234 8 232 581 151 494 1.49e-22 102
MsG0480018109.01.T01 MTR_7g021780 29.180 305 190 7 232 529 151 436 1.94e-22 102
MsG0480018109.01.T01 MTR_3g035730 28.852 305 191 7 232 529 151 436 8.36e-22 99.4
MsG0480018109.01.T01 MTR_1g112870 28.936 235 158 4 303 535 226 453 4.88e-21 97.1
MsG0480018109.01.T01 MTR_7g081010 28.936 235 158 4 303 535 224 451 5.00e-21 97.1
MsG0480018109.01.T01 MTR_0002s0550 29.658 263 159 8 210 464 126 370 8.44e-18 87.0
MsG0480018109.01.T01 MTR_1829s0010 29.949 197 118 5 337 529 1 181 2.35e-16 81.3
MsG0480018109.01.T01 MTR_2g066870 24.918 305 201 8 228 526 74 356 6.84e-16 80.9
MsG0480018109.01.T01 MTR_0212s0040 26.966 267 164 8 214 466 133 382 4.88e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018109.01.T01 AT1G78900 93.109 624 42 1 1 624 1 623 0.0 1205
MsG0480018109.01.T01 AT1G78900 93.109 624 42 1 1 624 1 623 0.0 1205
MsG0480018109.01.T01 AT5G08670 29.102 323 203 9 212 526 189 493 1.35e-26 114
MsG0480018109.01.T01 AT5G08690 29.102 323 203 9 212 526 189 493 1.36e-26 114
MsG0480018109.01.T01 AT5G08680 29.102 323 203 9 212 526 192 496 1.86e-26 114
MsG0480018109.01.T01 ATCG00480 29.180 305 190 7 232 529 151 436 6.40e-23 103
MsG0480018109.01.T01 AT4G38510 28.936 235 158 4 303 535 224 451 5.63e-21 97.1
MsG0480018109.01.T01 AT4G38510 28.936 235 158 4 303 535 224 451 5.63e-21 97.1
MsG0480018109.01.T01 AT4G38510 28.936 235 158 4 303 535 224 451 5.63e-21 97.1
MsG0480018109.01.T01 AT4G38510 28.936 235 158 4 303 535 224 451 5.63e-21 97.1
MsG0480018109.01.T01 AT4G38510 28.936 235 158 4 303 535 231 458 5.71e-21 97.1
MsG0480018109.01.T01 AT1G76030 28.511 235 159 4 303 535 223 450 2.41e-20 95.1
MsG0480018109.01.T01 AT1G20260 28.511 235 159 4 303 535 224 451 2.45e-20 95.1
MsG0480018109.01.T01 AT1G16820 79.487 39 8 0 529 567 4 42 9.03e-17 75.5
MsG0480018109.01.T01 ATCG00120 28.148 270 168 8 203 464 119 370 1.27e-16 83.6
MsG0480018109.01.T01 AT1G16820 81.579 38 7 0 530 567 32 69 2.88e-16 74.7
MsG0480018109.01.T01 ATMG01190 26.984 252 154 7 229 466 147 382 5.20e-13 72.4
MsG0480018109.01.T01 AT2G07698 27.099 262 159 7 220 466 408 652 1.02e-12 71.6

Find 214 sgRNAs with CRISPR-Local

Find 399 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCACATTTATTTCCTTTCT+TGG 0.160139 4:+314018 MsG0480018109.01.T01:three_prime_UTR
GCCTGCGGGCATGTGGATTC+TGG 0.181159 4:+314185 MsG0480018109.01.T01:three_prime_UTR
CATTATTCATTTCTACAATT+TGG 0.183883 4:+313298 MsG0480018109.01.T01:CDS
AGTGTTCTCTCGTATTTATT+TGG 0.245283 4:+313978 MsG0480018109.01.T01:three_prime_UTR
CTCATGTAACTGAGTAAATT+TGG 0.254624 4:-313828 None:intergenic
CATCCAGACCGACTTGTAAA+AGG 0.256724 4:-313267 None:intergenic
TGGATCAAATTGCTCGTAAA+AGG 0.269590 4:-312626 None:intergenic
CCCTGTTTGTTCCAGCTTGT+GGG 0.274505 4:+313036 MsG0480018109.01.T01:intron
AACAAAATGCCTGCCGTATA+TGG 0.279347 4:+308971 MsG0480018109.01.T01:exon
TTTCTACAATTTGGCAAATC+AGG 0.281762 4:+313307 MsG0480018109.01.T01:CDS
GTCCTAATGTTAATAAAATC+TGG 0.286727 4:-312646 None:intergenic
GAATTTCAGCCTAAGAAAAT+TGG 0.297288 4:+309955 MsG0480018109.01.T01:CDS
GGCATGTGGATTCTGGGTTC+TGG 0.306264 4:+314192 MsG0480018109.01.T01:three_prime_UTR
TTGTCCGTGGAGTTGGGTCC+TGG 0.312081 4:+309719 MsG0480018109.01.T01:CDS
GGAGTTGGGTCCTGGAATAT+TGG 0.329389 4:+309727 MsG0480018109.01.T01:CDS
CTGGGTTCTGGATTCATTGA+TGG 0.340065 4:+314204 MsG0480018109.01.T01:three_prime_UTR
AATGTTTGTTCAGGTTCTAA+TGG 0.343153 4:+311194 MsG0480018109.01.T01:intron
AAAGAAGTTCACCATGCTTC+AGG 0.343214 4:+310581 MsG0480018109.01.T01:CDS
TTCCTTTCTTGGCACTGGTT+TGG 0.344931 4:+314029 MsG0480018109.01.T01:three_prime_UTR
CACCCTCATCAAGCATCGTT+TGG 0.345840 4:+313654 MsG0480018109.01.T01:CDS
GCTGATACTCCTCTTCTTAC+TGG 0.347931 4:+310748 MsG0480018109.01.T01:CDS
CATCGGTGAAATTATTCGTT+TGG 0.350572 4:+309403 MsG0480018109.01.T01:CDS
CACTTGACAAAGATACACTA+TGG 0.351568 4:+309932 MsG0480018109.01.T01:CDS
AACTTGCAATCTACAATTAT+CGG 0.352472 4:-313889 None:intergenic
CATTAGTCAAGCTCTTTCTA+AGG 0.356071 4:+310935 MsG0480018109.01.T01:CDS
GTCTTTATTCCTATAGTAAG+AGG 0.361676 4:+313924 MsG0480018109.01.T01:three_prime_UTR
TAGAAGCCTCAATATTTAAC+CGG 0.362814 4:+314320 MsG0480018109.01.T01:three_prime_UTR
CGAAGAAACCGCTGGGTTGA+TGG 0.363561 4:+309582 MsG0480018109.01.T01:CDS
AACACTTTCCTTCTGTGAAC+TGG 0.365681 4:+312439 MsG0480018109.01.T01:CDS
AAAATATTTCCCAATATTCC+AGG 0.379934 4:-309737 None:intergenic
CATACGAGCTCCTCCATATA+CGG 0.381466 4:-308984 None:intergenic
ACAGCCTTTGTCCGTGGAGT+TGG 0.386521 4:+309712 MsG0480018109.01.T01:intron
CTGTTATTTACGTTGGTTGT+GGG 0.387366 4:+311072 MsG0480018109.01.T01:CDS
AGCTGAAGGGGAAGCCGCTT+TGG 0.388172 4:+313802 MsG0480018109.01.T01:CDS
TGTGCCATACCTGGAGCTTT+CGG 0.393237 4:+310897 MsG0480018109.01.T01:CDS
TTTATTTCCTTTCTTGGCAC+TGG 0.394653 4:+314024 MsG0480018109.01.T01:three_prime_UTR
CACCAAGTACAGAGGGGAAA+AGG 0.395658 4:-310869 None:intergenic
AGAGAGAGATAGATAGAGAT+CGG 0.400182 4:-308868 None:intergenic
CCTGCGGGCATGTGGATTCT+GGG 0.401633 4:+314186 MsG0480018109.01.T01:three_prime_UTR
GCTTGTGGGAAAGGATGCTT+TGG 0.404161 4:+313050 MsG0480018109.01.T01:intron
CGTGAAGCTTCAATTTATAC+AGG 0.408841 4:+311318 MsG0480018109.01.T01:CDS
CAGCCTTTGTCCGTGGAGTT+GGG 0.411118 4:+309713 MsG0480018109.01.T01:intron
TGCAACCCTCAGCATAGTTC+AGG 0.411286 4:+312175 MsG0480018109.01.T01:CDS
GTTACACTACCTGTCCGTTC+AGG 0.413292 4:-312098 None:intergenic
GTGTTAGAACTTGAGTTTCA+AGG 0.416234 4:+310552 MsG0480018109.01.T01:CDS
ATACCTGGAGCTTTCGGTTG+TGG 0.417647 4:+310903 MsG0480018109.01.T01:CDS
TCCTATAGTAAGAGGCAATC+TGG 0.420149 4:+313932 MsG0480018109.01.T01:three_prime_UTR
ACCCTCATCAAGCATCGTTT+GGG 0.421862 4:+313655 MsG0480018109.01.T01:CDS
GAGTTGGGTCCTGGAATATT+GGG 0.426379 4:+309728 MsG0480018109.01.T01:CDS
CGCACTTCCTCCTGATGCCA+TGG 0.432380 4:+310246 MsG0480018109.01.T01:CDS
GAAGCATTGCGTGAAATCTC+AGG 0.432730 4:+311751 MsG0480018109.01.T01:CDS
GCCTCTTTCTACGAACGTGC+TGG 0.433627 4:+312053 MsG0480018109.01.T01:CDS
GTCATTGCTGATGGCATGAA+TGG 0.439136 4:+309338 MsG0480018109.01.T01:CDS
CCCAGCACGTTCGTAGAAAG+AGG 0.439877 4:-312054 None:intergenic
GGTGAAGGAGATCTATTAAC+TGG 0.440637 4:+310073 MsG0480018109.01.T01:intron
TGATAATGAAGAAGAAGATC+TGG 0.440741 4:-308914 None:intergenic
TGTTTCGTCTATTATTCTCT+AGG 0.450189 4:-314113 None:intergenic
CTGCTATCGGCATACATGAA+TGG 0.461104 4:-314367 None:intergenic
TACTCCTCTTCTTACTGGTC+AGG 0.461627 4:+310753 MsG0480018109.01.T01:CDS
TCAATCTCATAACAGGTGTC+TGG 0.462933 4:+309308 MsG0480018109.01.T01:intron
ACCAGATTGCCTCTTACTAT+AGG 0.467067 4:-313933 None:intergenic
TCATTGCTGATGGCATGAAT+GGG 0.469503 4:+309339 MsG0480018109.01.T01:CDS
GAGAGAGATAGATAGAGATC+GGG 0.472107 4:-308867 None:intergenic
TTTGTTCCAGCTTGTGGGAA+AGG 0.472344 4:+313041 MsG0480018109.01.T01:intron
GTAACCTTTCCCATGGCATC+AGG 0.473055 4:-310256 None:intergenic
GCGGAAATGCCTGCTGATAG+TGG 0.473448 4:+312002 MsG0480018109.01.T01:CDS
GTCGGTGCTGTTTCTCCACC+TGG 0.474875 4:+312125 MsG0480018109.01.T01:CDS
GCTTCTAAAATTTATTGCTA+GGG 0.478915 4:-314304 None:intergenic
AGCCAAACCAGTGCCAAGAA+AGG 0.482138 4:-314031 None:intergenic
AGCTGGACAATATTCCTTGA+AGG 0.483863 4:+310291 MsG0480018109.01.T01:CDS
GCGTGAAATCTCAGGGAGAC+TGG 0.483866 4:+311759 MsG0480018109.01.T01:CDS
GGCTTCTAAAATTTATTGCT+AGG 0.486085 4:-314305 None:intergenic
TTTCAAAATATAACTGCTAT+CGG 0.486761 4:-314380 None:intergenic
GTTTAACCGACAAACCTTCA+AGG 0.487349 4:-310305 None:intergenic
ACTTGCAATCTACAATTATC+GGG 0.488476 4:-313888 None:intergenic
TTCAAGGAATATTGTCCAGC+TGG 0.489544 4:-310289 None:intergenic
GTGGCTTTGTGTTTGTGTTG+TGG 0.491137 4:-308789 None:intergenic
TTGCCACAACCGAAAGCTCC+AGG 0.493467 4:-310906 None:intergenic
TCGGCATACATGAATGGAAA+GGG 0.495718 4:-314361 None:intergenic
TCTGAGAAGGAGAGTGAATA+CGG 0.498885 4:+309022 MsG0480018109.01.T01:CDS
ATATGCCCGGTTAAATATTG+AGG 0.498910 4:-314326 None:intergenic
ACAGATTCTTCACGACCATC+AGG 0.502228 4:-311243 None:intergenic
AAAGCGGCTTCCCCTTCAGC+TGG 0.504457 4:-313800 None:intergenic
TGAAATTATTCGTTTGGAAG+GGG 0.507266 4:+309409 MsG0480018109.01.T01:CDS
GGATTCATTGATGGAAATTG+TGG 0.508833 4:+314213 MsG0480018109.01.T01:three_prime_UTR
CAAACAAAACAAATAATGAC+CGG 0.509380 4:-308740 None:intergenic
ATCCAGACCGACTTGTAAAA+GGG 0.509528 4:-313266 None:intergenic
CAGGCAGTAGAGAGGGGAGC+TGG 0.509847 4:+313607 MsG0480018109.01.T01:intron
ACAGGTAGTGTAACAATTGT+CGG 0.512435 4:+312107 MsG0480018109.01.T01:CDS
ACCAAGTACAGAGGGGAAAA+GGG 0.513659 4:-310868 None:intergenic
TTGTCCAGCTGGTGCTACAT+AGG 0.513702 4:-310278 None:intergenic
AATAAATACGAGAGAACACT+CGG 0.516965 4:-313975 None:intergenic
GTGAAATTATTCGTTTGGAA+GGG 0.517116 4:+309408 MsG0480018109.01.T01:CDS
TGATGGCAGATTCAACATCT+AGG 0.517164 4:+311722 MsG0480018109.01.T01:CDS
GAGAGGGGAGCTGGTACTGA+TGG 0.520025 4:+313616 MsG0480018109.01.T01:CDS
AGTGTATCTTTGTCAAGTGC+AGG 0.525694 4:-309928 None:intergenic
AAACGTGCAGCAAGGTAAGC+AGG 0.525996 4:-312029 None:intergenic
ACATTTGCAGGCAGTAGAGA+GGG 0.529946 4:+313600 MsG0480018109.01.T01:intron
GGACCTGTCGTCATTGCTGA+TGG 0.531125 4:+309329 MsG0480018109.01.T01:CDS
ATCTTATTCAAAGTATTCAA+CGG 0.531735 4:+312467 MsG0480018109.01.T01:CDS
TCTGAAGAAATATTAACTAT+CGG 0.533858 4:+314459 MsG0480018109.01.T01:three_prime_UTR
GTTACCTATGTAGCACCAGC+TGG 0.536200 4:+310274 MsG0480018109.01.T01:CDS
GTTTCGTCTATTATTCTCTA+GGG 0.536311 4:-314112 None:intergenic
GGTAATGTCATTGTAAGTTG+TGG 0.537002 4:-311222 None:intergenic
CCTCTTTCTACGAACGTGCT+GGG 0.541508 4:+312054 MsG0480018109.01.T01:CDS
CTTCTAAAATTTATTGCTAG+GGG 0.541802 4:-314303 None:intergenic
GGTGGGACATGTGCCATACC+TGG 0.542679 4:+310888 MsG0480018109.01.T01:CDS
TTCAAATACACATTGCTGCA+TGG 0.544858 4:-314254 None:intergenic
TGGGGAACGTGGAAATGAAA+TGG 0.545215 4:+311091 MsG0480018109.01.T01:CDS
GGTGAAATTATTCGTTTGGA+AGG 0.546857 4:+309407 MsG0480018109.01.T01:CDS
GGGGATTCTGCCACTATCCA+AGG 0.547337 4:+309428 MsG0480018109.01.T01:CDS
TCCTCCTGATGCCATGGGAA+AGG 0.549228 4:+310252 MsG0480018109.01.T01:CDS
GCTGGGAAAGTAAAATGTCT+TGG 0.549532 4:+312071 MsG0480018109.01.T01:CDS
TGACCGGGTGCGGACATATG+TGG 0.550479 4:-308724 None:intergenic
AATTCGAGGATCCAGCTGAA+GGG 0.551165 4:+313789 MsG0480018109.01.T01:CDS
GCTGTTATTTACGTTGGTTG+TGG 0.553122 4:+311071 MsG0480018109.01.T01:CDS
AAACAAATAATGACCGGGTG+CGG 0.554655 4:-308734 None:intergenic
CGATCTGAATGAAATTGTCC+AGG 0.555419 4:+312699 MsG0480018109.01.T01:CDS
CTGAGGGTTGCAGATGTCAC+GGG 0.557180 4:-312164 None:intergenic
GGGCTTCATCCTCAAGGTTG+CGG 0.558081 4:-313868 None:intergenic
GGGTTACAATGTCAGTATGA+TGG 0.558528 4:+311705 MsG0480018109.01.T01:CDS
GATTCATTGATGGAAATTGT+GGG 0.560783 4:+314214 MsG0480018109.01.T01:three_prime_UTR
CTTCATTATCATCATCTCTG+TGG 0.560916 4:+308926 MsG0480018109.01.T01:five_prime_UTR
GCAGGATATCCACTATCAGC+AGG 0.561487 4:-312011 None:intergenic
CCCAGAATCCACATGCCCGC+AGG 0.561591 4:-314186 None:intergenic
GGGAAAGTAAAATGTCTTGG+AGG 0.565366 4:+312074 MsG0480018109.01.T01:CDS
GGAAGTAAATAGAATATGCC+CGG 0.565616 4:-314339 None:intergenic
TCAGTTTACGAAGAAACCGC+TGG 0.566691 4:+309574 MsG0480018109.01.T01:intron
AGAAGCCTCAATATTTAACC+GGG 0.568111 4:+314321 MsG0480018109.01.T01:three_prime_UTR
ACCCATATCTCTAAAATACT+CGG 0.570251 4:-311686 None:intergenic
AAATTCGAGGATCCAGCTGA+AGG 0.571061 4:+313788 MsG0480018109.01.T01:CDS
TTACATGAGGACTTGACTAA+CGG 0.571744 4:+313842 MsG0480018109.01.T01:CDS
GCTGAGGGTTGCAGATGTCA+CGG 0.573005 4:-312165 None:intergenic
GGACCCAACTCCACGGACAA+AGG 0.574430 4:-309716 None:intergenic
CGAGCTCCTCCATATACGGC+AGG 0.575361 4:-308980 None:intergenic
ACTTTAACAGCCTTTGTCCG+TGG 0.576553 4:+309706 MsG0480018109.01.T01:intron
CTCCCAAACGATGCTTGATG+AGG 0.576595 4:-313657 None:intergenic
GCACTTCCTCCTGATGCCAT+GGG 0.579444 4:+310247 MsG0480018109.01.T01:CDS
GAAGCTTCACGAGCAGCCAC+AGG 0.579495 4:-311306 None:intergenic
GATCCACATATGTCCGCACC+CGG 0.579969 4:+308721 MsG0480018109.01.T01:five_prime_UTR
GGAAAGGATGCTTTGGCTGA+AGG 0.581501 4:+313057 MsG0480018109.01.T01:CDS
GATATAAGCCAGTTCACAGA+AGG 0.581665 4:-312447 None:intergenic
TTACAACATGAAGTGCCTGC+GGG 0.581678 4:+314171 MsG0480018109.01.T01:three_prime_UTR
TCCCGTGTTGCGTACTCACA+AGG 0.581708 4:+309612 MsG0480018109.01.T01:CDS
ACAACCGAAAGCTCCAGGTA+TGG 0.582873 4:-310901 None:intergenic
AGAAGAAGTACCTTGGATAG+TGG 0.583307 4:-309438 None:intergenic
ATTCGAGGATCCAGCTGAAG+GGG 0.584331 4:+313790 MsG0480018109.01.T01:CDS
AGAGGCAATCTGGTATCCAT+TGG 0.585006 4:+313942 MsG0480018109.01.T01:three_prime_UTR
ATGCCATCAGCAATGACGAC+AGG 0.585841 4:-309332 None:intergenic
ATTATCGGGCTTCATCCTCA+AGG 0.586083 4:-313874 None:intergenic
TCTGATGCTGTTATTTACGT+TGG 0.589546 4:+311065 MsG0480018109.01.T01:CDS
CTTGGAGGTCCTGAACGGAC+AGG 0.589572 4:+312089 MsG0480018109.01.T01:CDS
TAACGGTTTCCGCAACCTTG+AGG 0.592048 4:+313859 MsG0480018109.01.T01:CDS
GGCAGATTCAACATCTAGGT+GGG 0.593522 4:+311726 MsG0480018109.01.T01:CDS
GGATCAGAGAAATCTCCTCC+AGG 0.594174 4:-312143 None:intergenic
TTTGATGATGAGATTAGCAG+TGG 0.594742 4:-308808 None:intergenic
GAAGGAGATCTATTAACTGG+TGG 0.596709 4:+310076 MsG0480018109.01.T01:CDS
CTCCTTCTCAGAATCTTCGA+AGG 0.596821 4:-309011 None:intergenic
TACGTTGGTTGTGGGGAACG+TGG 0.597398 4:+311080 MsG0480018109.01.T01:CDS
TACATTTGCAGGCAGTAGAG+AGG 0.599451 4:+313599 MsG0480018109.01.T01:intron
CAAATTTACTCAGTTACATG+AGG 0.600230 4:+313829 MsG0480018109.01.T01:CDS
CATGAAGCGTACGACACTTG+TGG 0.601629 4:+311266 MsG0480018109.01.T01:CDS
ATGAAGTGCCTGCGGGCATG+TGG 0.602125 4:+314178 MsG0480018109.01.T01:three_prime_UTR
TCCCAAACGATGCTTGATGA+GGG 0.603431 4:-313656 None:intergenic
GTTGGTAATGATAATCTCAT+CGG 0.604917 4:+309386 MsG0480018109.01.T01:CDS
CACCTTCGAAGATTCTGAGA+AGG 0.608522 4:+309009 MsG0480018109.01.T01:CDS
TGAATACGGTTATGTTCGCA+AGG 0.608714 4:+309036 MsG0480018109.01.T01:CDS
GTCTTGTCATTCAGTCACCT+CGG 0.608860 4:+314082 MsG0480018109.01.T01:three_prime_UTR
ACCTTTCCCATGGCATCAGG+AGG 0.614069 4:-310253 None:intergenic
ACCTTGTGAGTACGCAACAC+GGG 0.615506 4:-309613 None:intergenic
TTGCAGGTCTCAGAAATTCG+AGG 0.615893 4:+313775 MsG0480018109.01.T01:intron
CATGTCCCACCAAGTACAGA+GGG 0.616525 4:-310876 None:intergenic
GTATTACCTGAACTATGCTG+AGG 0.617968 4:-312181 None:intergenic
CAGTTTACGAAGAAACCGCT+GGG 0.618918 4:+309575 MsG0480018109.01.T01:intron
AGTAAATTTGGCAACCAAAG+CGG 0.619646 4:-313816 None:intergenic
CTTACAATGACATTACCTGA+TGG 0.620185 4:+311228 MsG0480018109.01.T01:CDS
ATCGGCATACATGAATGGAA+AGG 0.620688 4:-314362 None:intergenic
TACATAGGTAACCTTTCCCA+TGG 0.626296 4:-310263 None:intergenic
AAGCATTGCGTGAAATCTCA+GGG 0.627454 4:+311752 MsG0480018109.01.T01:CDS
TGTTATTTACGTTGGTTGTG+GGG 0.630520 4:+311073 MsG0480018109.01.T01:CDS
ACTTGACAAAGATACACTAT+GGG 0.630782 4:+309933 MsG0480018109.01.T01:CDS
ACGTGGAAATGAAATGGCAG+AGG 0.635660 4:+311097 MsG0480018109.01.T01:CDS
GACCTTGTGAGTACGCAACA+CGG 0.636903 4:-309614 None:intergenic
ACTCGGGACATAGCTACCAA+TGG 0.637292 4:-313958 None:intergenic
TATTACCTGAACTATGCTGA+GGG 0.639805 4:-312180 None:intergenic
CTTACCTGACCAGTAAGAAG+AGG 0.641279 4:-310757 None:intergenic
CATTTGCAGGCAGTAGAGAG+GGG 0.642454 4:+313601 MsG0480018109.01.T01:intron
AATGTCTTGGAGGTCCTGAA+CGG 0.642970 4:+312084 MsG0480018109.01.T01:CDS
CTTCTCAGAATCTTCGAAGG+TGG 0.643607 4:-309008 None:intergenic
TTCTCTAGGGACAAAAGCCG+AGG 0.644552 4:-314099 None:intergenic
ACAGGCCTAGGTGTACGTAC+AGG 0.650613 4:-310709 None:intergenic
TTTACAACATGAAGTGCCTG+CGG 0.652133 4:+314170 MsG0480018109.01.T01:three_prime_UTR
CGGCATACATGAATGGAAAG+GGG 0.652431 4:-314360 None:intergenic
CATCAGGAGGAAGTGCGACA+CGG 0.652949 4:-310240 None:intergenic
AAACAAAACAAATAATGACC+GGG 0.654737 4:-308739 None:intergenic
ATGGCCACAGACCTGAAGCA+TGG 0.657103 4:-310592 None:intergenic
AAACACTTCAAACATGCCTG+TGG 0.657646 4:+311290 MsG0480018109.01.T01:CDS
AAAATGCCTGCCGTATATGG+AGG 0.658083 4:+308974 MsG0480018109.01.T01:exon
TATTCCAGGACCCAACTCCA+CGG 0.660424 4:-309723 None:intergenic
ATGTATGAACTTGTCCGTGT+TGG 0.660568 4:+309368 MsG0480018109.01.T01:CDS
CATTGCTGATGGCATGAATG+GGG 0.661823 4:+309340 MsG0480018109.01.T01:CDS
TGGCAGATTCAACATCTAGG+TGG 0.662633 4:+311725 MsG0480018109.01.T01:CDS
AAGAGGCTAAACGTGCAGCA+AGG 0.667314 4:-312037 None:intergenic
ACATGTCCCACCAAGTACAG+AGG 0.675200 4:-310877 None:intergenic
ATCATTAACCATCAACCCAG+CGG 0.685558 4:-309590 None:intergenic
TCAGAGAAATCTCCTCCAGG+TGG 0.694008 4:-312140 None:intergenic
GGTGCTGTTTCTCCACCTGG+AGG 0.696178 4:+312128 MsG0480018109.01.T01:CDS
GTTGGCCTGTACGTACACCT+AGG 0.708793 4:+310704 MsG0480018109.01.T01:CDS
ATTCATTGATGGAAATTGTG+GGG 0.714055 4:+314215 MsG0480018109.01.T01:three_prime_UTR
TGAGATTATCATTACCAACA+CGG 0.734535 4:-309382 None:intergenic
GCTGACGTCTATATTCCTCG+TGG 0.745785 4:+309895 MsG0480018109.01.T01:CDS
ATAAATACGAGAGAACACTC+GGG 0.758507 4:-313974 None:intergenic
GCAGGAACAGACACGCCACG+AGG 0.766426 4:-309910 None:intergenic
ATGTCCCACCAAGTACAGAG+GGG 0.790841 4:-310875 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAATTAATTAATCG+AGG - Chr4:309189-309208 None:intergenic 10.0%
!! TAAACATAAAAATGAAATAA+TGG - Chr4:310379-310398 None:intergenic 10.0%
!! TTAATTAATTAATTAATCGA+GGG - Chr4:309188-309207 None:intergenic 10.0%
!!! AAAAATTGCTTTTAATAATT+TGG + Chr4:310996-311015 MsG0480018109.01.T01:intron 10.0%
!! ATATATGTTTGTCAAAATAT+AGG + Chr4:312215-312234 MsG0480018109.01.T01:intron 15.0%
!! ATTAAAATTGTGAATGAAAT+CGG - Chr4:309111-309130 None:intergenic 15.0%
!! TATATGTTTGTCAAAATATA+GGG + Chr4:312216-312235 MsG0480018109.01.T01:intron 15.0%
!! TTAAGTTATAATGAAACATA+AGG - Chr4:310659-310678 None:intergenic 15.0%
!! TTTGATATAAATAACGTAAA+AGG - Chr4:311130-311149 None:intergenic 15.0%
!!! ATTTAAAACCAAATATTCAT+AGG - Chr4:309788-309807 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTTTCCAC+AGG + Chr4:311980-311999 MsG0480018109.01.T01:intron 15.0%
!! AATATAACAAAGTTTCATCT+CGG - Chr4:311587-311606 None:intergenic 20.0%
!! ATATCTATTACAAACACAAA+AGG - Chr4:313234-313253 None:intergenic 20.0%
!! ATATTGAAAATTTGAAAAGC+CGG - Chr4:309830-309849 None:intergenic 20.0%
!! ATCAAAGCTAACAATTTAAA+AGG - Chr4:313160-313179 None:intergenic 20.0%
!! CATTATTCATTTCTACAATT+TGG + Chr4:313298-313317 MsG0480018109.01.T01:CDS 20.0%
!! GATATTAAATTATGAATCGA+TGG - Chr4:309072-309091 None:intergenic 20.0%
!! TATAGAACTTAAGCATAAAA+TGG - Chr4:309992-310011 None:intergenic 20.0%
!! TCAAAGCTAACAATTTAAAA+GGG - Chr4:313159-313178 None:intergenic 20.0%
!! TCTCATTAAAAACAAAGAAA+AGG - Chr4:309519-309538 None:intergenic 20.0%
!! TCTGAAGAAATATTAACTAT+CGG + Chr4:314459-314478 MsG0480018109.01.T01:three_prime_UTR 20.0%
!! TTAAAATTGTGAATGAAATC+GGG - Chr4:309110-309129 None:intergenic 20.0%
!! TTTCAAAATATAACTGCTAT+CGG - Chr4:314383-314402 None:intergenic 20.0%
!!! AAAAAGAAGTTTTAGACTTT+AGG - Chr4:311357-311376 None:intergenic 20.0%
!!! AAATATTTTTGATGGAATTC+AGG + Chr4:309751-309770 MsG0480018109.01.T01:CDS 20.0%
!!! AAATTCTTTCTAAAAGAAAC+TGG - Chr4:311818-311837 None:intergenic 20.0%
!!! AATATTTTCTATCTTAACAG+AGG + Chr4:309845-309864 MsG0480018109.01.T01:intron 20.0%
!!! ACATTATTTCTATTATTTGC+AGG + Chr4:310524-310543 MsG0480018109.01.T01:intron 20.0%
!!! ATATTGGGAAATATTTTTGA+TGG + Chr4:309743-309762 MsG0480018109.01.T01:CDS 20.0%
!!! ATCCAGATTTTATTAACATT+AGG + Chr4:312644-312663 MsG0480018109.01.T01:CDS 20.0%
!!! ATCTTATTCAAAGTATTCAA+CGG + Chr4:312467-312486 MsG0480018109.01.T01:CDS 20.0%
!!! ATTAGTATTGTTTTGTTGTT+TGG + Chr4:312938-312957 MsG0480018109.01.T01:intron 20.0%
!!! ATTCTGTTCTATTTTATTAC+TGG + Chr4:310045-310064 MsG0480018109.01.T01:intron 20.0%
!!! ATTTTTGCAATAGTTTTCAA+TGG - Chr4:309871-309890 None:intergenic 20.0%
!!! GTATTTTTCCTATGAATATT+TGG + Chr4:309777-309796 MsG0480018109.01.T01:intron 20.0%
!!! TATGAGATTGATTCAAATTA+TGG - Chr4:309299-309318 None:intergenic 20.0%
!!! TCTATATCTTTTGCAATATT+TGG + Chr4:310499-310518 MsG0480018109.01.T01:intron 20.0%
! AAAATATTTCCCAATATTCC+AGG - Chr4:309740-309759 None:intergenic 25.0%
! AAACAAAACAAATAATGACC+GGG - Chr4:308742-308761 None:intergenic 25.0%
! AACAATGTTACATTAGAGTA+AGG + Chr4:313349-313368 MsG0480018109.01.T01:intron 25.0%
! AACAGAATATCAGAACAAAT+GGG - Chr4:310033-310052 None:intergenic 25.0%
! AACCTGAACAAACATTAAAA+TGG - Chr4:311190-311209 None:intergenic 25.0%
! AACTTGCAATCTACAATTAT+CGG - Chr4:313892-313911 None:intergenic 25.0%
! AAGCAACTAAAAAAAAGAGA+TGG - Chr4:310614-310633 None:intergenic 25.0%
! AATAATCGACAAAAAGATTC+AGG - Chr4:310180-310199 None:intergenic 25.0%
! AATGATCTTCTAACAGAAAT+AGG - Chr4:310349-310368 None:intergenic 25.0%
! AATTTGAATACTGTCAAAGA+GGG - Chr4:311046-311065 None:intergenic 25.0%
! ACAAGGCACAAAATAAAAAT+TGG - Chr4:310784-310803 None:intergenic 25.0%
! ACAAGGGTTTAAGTAATTTA+TGG - Chr4:312287-312306 None:intergenic 25.0%
! AGAAATACGGGAATATAAAA+TGG - Chr4:311561-311580 None:intergenic 25.0%
! ATAATGACTAATGAGATACA+TGG + Chr4:311928-311947 MsG0480018109.01.T01:intron 25.0%
! ATATAACAAAGTTTCATCTC+GGG - Chr4:311586-311605 None:intergenic 25.0%
! ATCACATTTATTTCCTTTCT+TGG + Chr4:314018-314037 MsG0480018109.01.T01:three_prime_UTR 25.0%
! ATGATCTTCTAACAGAAATA+GGG - Chr4:310348-310367 None:intergenic 25.0%
! ATTGATCACTGTAAATTGAT+GGG + Chr4:311953-311972 MsG0480018109.01.T01:intron 25.0%
! ATTTGAATCAATCTCATAAC+AGG + Chr4:309301-309320 MsG0480018109.01.T01:intron 25.0%
! CAAACAAAACAAATAATGAC+CGG - Chr4:308743-308762 None:intergenic 25.0%
! CAAATGCAAAATTTATTTGC+AGG - Chr4:312248-312267 None:intergenic 25.0%
! CAAGGGTTTAAGTAATTTAT+GGG - Chr4:312286-312305 None:intergenic 25.0%
! CATATCAATATGCATAATTC+AGG - Chr4:311538-311557 None:intergenic 25.0%
! CTATAACGAAAACATATACA+CGG + Chr4:310007-310026 MsG0480018109.01.T01:intron 25.0%
! GATTATCTATTCTACATTAG+TGG - Chr4:311902-311921 None:intergenic 25.0%
! GTCCTAATGTTAATAAAATC+TGG - Chr4:312649-312668 None:intergenic 25.0%
! TAATTACTAATAACACCCTT+TGG - Chr4:313499-313518 None:intergenic 25.0%
! TCAAGATGATTAATGTACAA+AGG - Chr4:312731-312750 None:intergenic 25.0%
! TCTTAAGCTATCATTTGTAA+TGG + Chr4:312528-312547 MsG0480018109.01.T01:intron 25.0%
!! ATATTTTCTATGGTATCATC+AGG + Chr4:312594-312613 MsG0480018109.01.T01:intron 25.0%
!! CAATATGTACCAATTTTCTT+AGG - Chr4:309967-309986 None:intergenic 25.0%
!! CTGCAAATAAATTTTGCATT+TGG + Chr4:312246-312265 MsG0480018109.01.T01:intron 25.0%
!! TAATTTGATCTTTTGCTACT+TGG + Chr4:312376-312395 MsG0480018109.01.T01:intron 25.0%
!!! AACCATTTTAATGTTTGTTC+AGG + Chr4:311185-311204 MsG0480018109.01.T01:intron 25.0%
!!! AATGAAAGTTCTGAAAGAAT+AGG - Chr4:312349-312368 None:intergenic 25.0%
!!! CTTATTTTGACATGTAAAGT+AGG + Chr4:313728-313747 MsG0480018109.01.T01:intron 25.0%
!!! CTTCTAAAATTTATTGCTAG+GGG - Chr4:314306-314325 None:intergenic 25.0%
!!! GCTTCTAAAATTTATTGCTA+GGG - Chr4:314307-314326 None:intergenic 25.0%
!!! TAAAGTAGGTCTTATTATGT+TGG + Chr4:313742-313761 MsG0480018109.01.T01:intron 25.0%
!!! TCAGCTTCTTTTTTAAATAG+AGG + Chr4:312807-312826 MsG0480018109.01.T01:intron 25.0%
!!! TTTTTTTTTTTTTCCACAGG+CGG + Chr4:311983-312002 MsG0480018109.01.T01:intron 25.0%
AAACAGAATAGTCAGAATCT+AGG - Chr4:311643-311662 None:intergenic 30.0%
AATAAATACGAGAGAACACT+CGG - Chr4:313978-313997 None:intergenic 30.0%
AATATTCCTTGAAGGTTTGT+CGG + Chr4:310299-310318 MsG0480018109.01.T01:intron 30.0%
ACATTCCAAATATTGACAGT+AGG - Chr4:311412-311431 None:intergenic 30.0%
ACTTGACAAAGATACACTAT+GGG + Chr4:309933-309952 MsG0480018109.01.T01:CDS 30.0%
ACTTGCAATCTACAATTATC+GGG - Chr4:313891-313910 None:intergenic 30.0%
AGAATCTAGGAGGTAAAAAA+AGG - Chr4:311630-311649 None:intergenic 30.0%
AGAGAGACAGTTAAAAAAAG+AGG + Chr4:308687-308706 MsG0480018109.01.T01:five_prime_UTR 30.0%
AGTGTTCTCTCGTATTTATT+TGG + Chr4:313978-313997 MsG0480018109.01.T01:three_prime_UTR 30.0%
ATCTATCTGATTTCAATTGC+CGG + Chr4:309808-309827 MsG0480018109.01.T01:intron 30.0%
ATTAATTAATCGAGGGATGA+TGG - Chr4:309181-309200 None:intergenic 30.0%
ATTCATTGATGGAAATTGTG+GGG + Chr4:314215-314234 MsG0480018109.01.T01:three_prime_UTR 30.0%
CAAATTTACTCAGTTACATG+AGG + Chr4:313829-313848 MsG0480018109.01.T01:CDS 30.0%
CATTGATCACTGTAAATTGA+TGG + Chr4:311952-311971 MsG0480018109.01.T01:intron 30.0%
CTCATGTAACTGAGTAAATT+TGG - Chr4:313831-313850 None:intergenic 30.0%
GAAAAGAGATTTCAGTAAGA+TGG + Chr4:313534-313553 MsG0480018109.01.T01:intron 30.0%
GAACAGAATATCAGAACAAA+TGG - Chr4:310034-310053 None:intergenic 30.0%
GAATTTCAGCCTAAGAAAAT+TGG + Chr4:309955-309974 MsG0480018109.01.T01:CDS 30.0%
GAATTTGAATACTGTCAAAG+AGG - Chr4:311047-311066 None:intergenic 30.0%
GATTCATTGATGGAAATTGT+GGG + Chr4:314214-314233 MsG0480018109.01.T01:three_prime_UTR 30.0%
GTCTTTATTCCTATAGTAAG+AGG + Chr4:313924-313943 MsG0480018109.01.T01:three_prime_UTR 30.0%
GTGAAATTATTCGTTTGGAA+GGG + Chr4:309408-309427 MsG0480018109.01.T01:CDS 30.0%
GTTTCGTCTATTATTCTCTA+GGG - Chr4:314115-314134 None:intergenic 30.0%
TAGAACATATAACAATGCAC+AGG - Chr4:310141-310160 None:intergenic 30.0%
TAGAAGCCTCAATATTTAAC+CGG + Chr4:314320-314339 MsG0480018109.01.T01:three_prime_UTR 30.0%
TATCTATTCTACATTAGTGG+AGG - Chr4:311899-311918 None:intergenic 30.0%
TCAGAATTTGATCATACACA+AGG - Chr4:310801-310820 None:intergenic 30.0%
TGAAATTATTCGTTTGGAAG+GGG + Chr4:309409-309428 MsG0480018109.01.T01:CDS 30.0%
TGAATAAACGCATTCAAACT+TGG - Chr4:310452-310471 None:intergenic 30.0%
TGAGATTATCATTACCAACA+CGG - Chr4:309385-309404 None:intergenic 30.0%
TGCTTGATTCATTGAAGTAT+TGG + Chr4:310629-310648 MsG0480018109.01.T01:intron 30.0%
TGTGCTTAGTGTAAAAATTG+AGG + Chr4:311511-311530 MsG0480018109.01.T01:intron 30.0%
TGTTTCGTCTATTATTCTCT+AGG - Chr4:314116-314135 None:intergenic 30.0%
TTACATATTGTTCCTTGACA+TGG - Chr4:310974-310993 None:intergenic 30.0%
TTATTAGACTATCCATTGCA+TGG - Chr4:312903-312922 None:intergenic 30.0%
TTCATAGAATATGTGAGTGA+AGG - Chr4:313434-313453 None:intergenic 30.0%
TTTCTACAATTTGGCAAATC+AGG + Chr4:313307-313326 MsG0480018109.01.T01:CDS 30.0%
! AATAATTTTCAACCCATACC+AGG - Chr4:312788-312807 None:intergenic 30.0%
! AATGTTTGTTCAGGTTCTAA+TGG + Chr4:311194-311213 MsG0480018109.01.T01:intron 30.0%
! CAAAAGTTTTGCAGTTTCTA+AGG - Chr4:313094-313113 None:intergenic 30.0%
! TCTATTTTATTACTGGTCAC+AGG + Chr4:310052-310071 MsG0480018109.01.T01:intron 30.0%
! TCTTACTGAAATCTCTTTTC+AGG - Chr4:313534-313553 None:intergenic 30.0%
! TGATAATGAAGAAGAAGATC+TGG - Chr4:308917-308936 None:intergenic 30.0%
!! ACAATTTAAAAGGGCACTTA+CGG - Chr4:313150-313169 None:intergenic 30.0%
!! ACCCATATCTCTAAAATACT+CGG - Chr4:311689-311708 None:intergenic 30.0%
!! GGCTTCTAAAATTTATTGCT+AGG - Chr4:314308-314327 None:intergenic 30.0%
!! GTTGGTAATGATAATCTCAT+CGG + Chr4:309386-309405 MsG0480018109.01.T01:CDS 30.0%
!! TGTTTTCGAGAACAGTTTAA+TGG + Chr4:310213-310232 MsG0480018109.01.T01:CDS 30.0%
!!! AAGAAGTTTTAGACTTTAGG+AGG - Chr4:311354-311373 None:intergenic 30.0%
!!! GCTTCTTTTTTAAATAGAGG+TGG + Chr4:312810-312829 MsG0480018109.01.T01:intron 30.0%
AATCTTCCTATGATCTTTCC+TGG + Chr4:312767-312786 MsG0480018109.01.T01:intron 35.0%
AATGCACAGGCTAATCTAAT+TGG - Chr4:310128-310147 None:intergenic 35.0%
ACAATTTGGCAAATCAGGTA+TGG + Chr4:313312-313331 MsG0480018109.01.T01:intron 35.0%
ACAGGTAGTGTAACAATTGT+CGG + Chr4:312107-312126 MsG0480018109.01.T01:CDS 35.0%
AGAAGCCTCAATATTTAACC+GGG + Chr4:314321-314340 MsG0480018109.01.T01:three_prime_UTR 35.0%
AGAGAGAGATAGATAGAGAT+CGG - Chr4:308871-308890 None:intergenic 35.0%
AGTAAATTTGGCAACCAAAG+CGG - Chr4:313819-313838 None:intergenic 35.0%
ATAAATACGAGAGAACACTC+GGG - Chr4:313977-313996 None:intergenic 35.0%
ATATGCCCGGTTAAATATTG+AGG - Chr4:314329-314348 None:intergenic 35.0%
CACTTGACAAAGATACACTA+TGG + Chr4:309932-309951 MsG0480018109.01.T01:CDS 35.0%
CATCGGTGAAATTATTCGTT+TGG + Chr4:309403-309422 MsG0480018109.01.T01:CDS 35.0%
CATTAGTCAAGCTCTTTCTA+AGG + Chr4:310935-310954 MsG0480018109.01.T01:CDS 35.0%
CGTGAAGCTTCAATTTATAC+AGG + Chr4:311318-311337 MsG0480018109.01.T01:CDS 35.0%
CTTACAATGACATTACCTGA+TGG + Chr4:311228-311247 MsG0480018109.01.T01:CDS 35.0%
CTTCATTATCATCATCTCTG+TGG + Chr4:308926-308945 MsG0480018109.01.T01:five_prime_UTR 35.0%
GCAATGGATAGTCTAATAAG+TGG + Chr4:312904-312923 MsG0480018109.01.T01:intron 35.0%
GCATAATATAGTCCATGCAA+TGG + Chr4:312888-312907 MsG0480018109.01.T01:intron 35.0%
GGAAAAGTCCATCTAAATGT+AGG + Chr4:313370-313389 MsG0480018109.01.T01:intron 35.0%
GGAAGTAAATAGAATATGCC+CGG - Chr4:314342-314361 None:intergenic 35.0%
GGATTCATTGATGGAAATTG+TGG + Chr4:314213-314232 MsG0480018109.01.T01:three_prime_UTR 35.0%
GGGAAACAGGAAAAATTAAG+AGG - Chr4:311026-311045 None:intergenic 35.0%
GGTAATGTCATTGTAAGTTG+TGG - Chr4:311225-311244 None:intergenic 35.0%
GGTGAAATTATTCGTTTGGA+AGG + Chr4:309407-309426 MsG0480018109.01.T01:CDS 35.0%
GTGTTAGAACTTGAGTTTCA+AGG + Chr4:310552-310571 MsG0480018109.01.T01:CDS 35.0%
TACACAAAACAGAAGTCATC+AGG - Chr4:310834-310853 None:intergenic 35.0%
TATTACCTGAACTATGCTGA+GGG - Chr4:312183-312202 None:intergenic 35.0%
TCTCTCCTACTGTCAATATT+TGG + Chr4:311404-311423 MsG0480018109.01.T01:intron 35.0%
TGGACTATATTATGCAAACC+AGG - Chr4:312883-312902 None:intergenic 35.0%
TGGATCAAATTGCTCGTAAA+AGG - Chr4:312629-312648 None:intergenic 35.0%
TTACATGAGGACTTGACTAA+CGG + Chr4:313842-313861 MsG0480018109.01.T01:CDS 35.0%
TTCAAATACACATTGCTGCA+TGG - Chr4:314257-314276 None:intergenic 35.0%
TTCATCTCGGGTAAGAAATA+CGG - Chr4:311574-311593 None:intergenic 35.0%
TTGTTTGGACAAAGTTTGTC+AGG + Chr4:312953-312972 MsG0480018109.01.T01:intron 35.0%
TTTATTTCCTTTCTTGGCAC+TGG + Chr4:314024-314043 MsG0480018109.01.T01:three_prime_UTR 35.0%
! ACTGTACCAATTTTCAGAGT+TGG + Chr4:310686-310705 MsG0480018109.01.T01:intron 35.0%
! CTGTTATTTACGTTGGTTGT+GGG + Chr4:311072-311091 MsG0480018109.01.T01:CDS 35.0%
! GAGTAATTTTACTGCTACTC+TGG + Chr4:313701-313720 MsG0480018109.01.T01:intron 35.0%
! TCTGATGCTGTTATTTACGT+TGG + Chr4:311065-311084 MsG0480018109.01.T01:CDS 35.0%
! TGTTATTTACGTTGGTTGTG+GGG + Chr4:311073-311092 MsG0480018109.01.T01:CDS 35.0%
!! AACTGCAAAACTTTTGAGAG+AGG + Chr4:313098-313117 MsG0480018109.01.T01:CDS 35.0%
!! AGCCGAGTATTTTAGAGATA+TGG + Chr4:311684-311703 MsG0480018109.01.T01:CDS 35.0%
!! GCCGAGTATTTTAGAGATAT+GGG + Chr4:311685-311704 MsG0480018109.01.T01:CDS 35.0%
!! TTTGATGATGAGATTAGCAG+TGG - Chr4:308811-308830 None:intergenic 35.0%
AAACAAATAATGACCGGGTG+CGG - Chr4:308737-308756 None:intergenic 40.0%
AAACACTTCAAACATGCCTG+TGG + Chr4:311290-311309 MsG0480018109.01.T01:CDS 40.0%
AAAGAAGTTCACCATGCTTC+AGG + Chr4:310581-310600 MsG0480018109.01.T01:CDS 40.0%
AACAAAATGCCTGCCGTATA+TGG + Chr4:308971-308990 MsG0480018109.01.T01:exon 40.0%
AACACTTTCCTTCTGTGAAC+TGG + Chr4:312439-312458 MsG0480018109.01.T01:CDS 40.0%
AACCAAAGATCATAGTGACG+AGG - Chr4:312314-312333 None:intergenic 40.0%
AAGATCTGGATCAAAAACCC+AGG - Chr4:308903-308922 None:intergenic 40.0%
AATGTACAAAGGAACACACC+TGG - Chr4:312720-312739 None:intergenic 40.0%
ACCAAAGATCATAGTGACGA+GGG - Chr4:312313-312332 None:intergenic 40.0%
ACCAGATTGCCTCTTACTAT+AGG - Chr4:313936-313955 None:intergenic 40.0%
AGATCTGGATCAAAAACCCA+GGG - Chr4:308902-308921 None:intergenic 40.0%
AGCTGGACAATATTCCTTGA+AGG + Chr4:310291-310310 MsG0480018109.01.T01:CDS 40.0%
AGTAATGTCCAGTCTAAACC+TGG + Chr4:312862-312881 MsG0480018109.01.T01:intron 40.0%
AGTGATATGTGTGTGTGTGT+GGG + Chr4:310400-310419 MsG0480018109.01.T01:intron 40.0%
AGTGTATCTTTGTCAAGTGC+AGG - Chr4:309931-309950 None:intergenic 40.0%
ATACTGTCAAAGAGGGAAAC+AGG - Chr4:311039-311058 None:intergenic 40.0%
ATCATTAACCATCAACCCAG+CGG - Chr4:309593-309612 None:intergenic 40.0%
ATCGGCATACATGAATGGAA+AGG - Chr4:314365-314384 None:intergenic 40.0%
ATGTATGAACTTGTCCGTGT+TGG + Chr4:309368-309387 MsG0480018109.01.T01:CDS 40.0%
CAAATCAGGTATGGTGTGTA+AGG + Chr4:313321-313340 MsG0480018109.01.T01:intron 40.0%
CAGAATAGTCAGAATCTAGG+AGG - Chr4:311640-311659 None:intergenic 40.0%
CCATCTAAATGTAGGCATGT+AGG + Chr4:313378-313397 MsG0480018109.01.T01:intron 40.0%
CCTACATGCCTACATTTAGA+TGG - Chr4:313381-313400 None:intergenic 40.0%
CCTATGATCTTTCCTGGTAT+GGG + Chr4:312773-312792 MsG0480018109.01.T01:intron 40.0%
CGATCTGAATGAAATTGTCC+AGG + Chr4:312699-312718 MsG0480018109.01.T01:CDS 40.0%
GAAGGAGATCTATTAACTGG+TGG + Chr4:310076-310095 MsG0480018109.01.T01:CDS 40.0%
GAGAGAGATAGATAGAGATC+GGG - Chr4:308870-308889 None:intergenic 40.0%
GATATAAGCCAGTTCACAGA+AGG - Chr4:312450-312469 None:intergenic 40.0%
GCTGGGAAAGTAAAATGTCT+TGG + Chr4:312071-312090 MsG0480018109.01.T01:CDS 40.0%
GGGAAAGTAAAATGTCTTGG+AGG + Chr4:312074-312093 MsG0480018109.01.T01:CDS 40.0%
GGGTTACAATGTCAGTATGA+TGG + Chr4:311705-311724 MsG0480018109.01.T01:CDS 40.0%
GGTGAAGGAGATCTATTAAC+TGG + Chr4:310073-310092 MsG0480018109.01.T01:intron 40.0%
GTATTACCTGAACTATGCTG+AGG - Chr4:312184-312203 None:intergenic 40.0%
GTCGATCTTTAACGTGAAAC+TGG + Chr4:313575-313594 MsG0480018109.01.T01:intron 40.0%
GTTTAACCGACAAACCTTCA+AGG - Chr4:310308-310327 None:intergenic 40.0%
TACATAGGTAACCTTTCCCA+TGG - Chr4:310266-310285 None:intergenic 40.0%
TATCAACCGCATAACAGCAA+GGG - Chr4:311165-311184 None:intergenic 40.0%
TATGCAAACCAGGTTTAGAC+TGG - Chr4:312873-312892 None:intergenic 40.0%
TATTGACAGTAGGAGAGAAC+TGG - Chr4:311402-311421 None:intergenic 40.0%
TCAATCTCATAACAGGTGTC+TGG + Chr4:309308-309327 MsG0480018109.01.T01:intron 40.0%
TCATCTCGGGTAAGAAATAC+GGG - Chr4:311573-311592 None:intergenic 40.0%
TCATTGCTGATGGCATGAAT+GGG + Chr4:309339-309358 MsG0480018109.01.T01:CDS 40.0%
TCCTATAGTAAGAGGCAATC+TGG + Chr4:313932-313951 MsG0480018109.01.T01:three_prime_UTR 40.0%
TCCTATGATCTTTCCTGGTA+TGG + Chr4:312772-312791 MsG0480018109.01.T01:intron 40.0%
TCGGCATACATGAATGGAAA+GGG - Chr4:314364-314383 None:intergenic 40.0%
TCTGAGAAGGAGAGTGAATA+CGG + Chr4:309022-309041 MsG0480018109.01.T01:CDS 40.0%
TGAATACGGTTATGTTCGCA+AGG + Chr4:309036-309055 MsG0480018109.01.T01:CDS 40.0%
TGATGGCAGATTCAACATCT+AGG + Chr4:311722-311741 MsG0480018109.01.T01:CDS 40.0%
TGCAATGAGTAGTGTTTCTC+AGG + Chr4:311451-311470 MsG0480018109.01.T01:intron 40.0%
TTATCAACCGCATAACAGCA+AGG - Chr4:311166-311185 None:intergenic 40.0%
TTATTACTGGTCACAGGTGA+AGG + Chr4:310058-310077 MsG0480018109.01.T01:intron 40.0%
TTCAAGGAATATTGTCCAGC+TGG - Chr4:310292-310311 None:intergenic 40.0%
TTCTCGAAAACAGTCTGCAA+TGG - Chr4:310205-310224 None:intergenic 40.0%
TTTGTCATAGCTCAGCCAAA+GGG + Chr4:313481-313500 MsG0480018109.01.T01:intron 40.0%
! AAGCATTGCGTGAAATCTCA+GGG + Chr4:311752-311771 MsG0480018109.01.T01:CDS 40.0%
! CGAGCTTTAGTTTCTGATGT+TGG + Chr4:311865-311884 MsG0480018109.01.T01:intron 40.0%
! GCTGTTATTTACGTTGGTTG+TGG + Chr4:311071-311090 MsG0480018109.01.T01:CDS 40.0%
! GTTCTGTCCCTTTTACAAGT+CGG + Chr4:313259-313278 MsG0480018109.01.T01:CDS 40.0%
! TACAGGCCAACTCTGAAAAT+TGG - Chr4:310695-310714 None:intergenic 40.0%
! TCTGAGACCTGCAATAACAA+CGG - Chr4:313769-313788 None:intergenic 40.0%
! TTTACAACATGAAGTGCCTG+CGG + Chr4:314170-314189 MsG0480018109.01.T01:three_prime_UTR 40.0%
!! AGAAGAAGTACCTTGGATAG+TGG - Chr4:309441-309460 None:intergenic 40.0%
!! AGTGTCTAGAAGAAGTACCT+TGG - Chr4:309448-309467 None:intergenic 40.0%
!! ATCCAGACCGACTTGTAAAA+GGG - Chr4:313269-313288 None:intergenic 40.0%
!! TCTCAGGACCTGTTATTTCT+GGG + Chr4:311467-311486 MsG0480018109.01.T01:intron 40.0%
!! TTCTCAGGACCTGTTATTTC+TGG + Chr4:311466-311485 MsG0480018109.01.T01:intron 40.0%
!! TTGATCTTTTGCTACTTGGC+AGG + Chr4:312380-312399 MsG0480018109.01.T01:intron 40.0%
!!! CTATTCTGTTTTCGAGTCTC+AGG + Chr4:311652-311671 MsG0480018109.01.T01:intron 40.0%
!!! GCGTAAAAGCATTTTGAGCA+AGG - Chr4:313128-313147 None:intergenic 40.0%
AAAATGCCTGCCGTATATGG+AGG + Chr4:308974-308993 MsG0480018109.01.T01:exon 45.0%
AAATTCGAGGATCCAGCTGA+AGG + Chr4:313788-313807 MsG0480018109.01.T01:CDS 45.0%
AATGTCTTGGAGGTCCTGAA+CGG + Chr4:312084-312103 MsG0480018109.01.T01:CDS 45.0%
AATTCGAGGATCCAGCTGAA+GGG + Chr4:313789-313808 MsG0480018109.01.T01:CDS 45.0%
ACAGATTCTTCACGACCATC+AGG - Chr4:311246-311265 None:intergenic 45.0%
ACATTTGCAGGCAGTAGAGA+GGG + Chr4:313600-313619 MsG0480018109.01.T01:intron 45.0%
ACCAAGTACAGAGGGGAAAA+GGG - Chr4:310871-310890 None:intergenic 45.0%
ACGTGGAAATGAAATGGCAG+AGG + Chr4:311097-311116 MsG0480018109.01.T01:CDS 45.0%
ACTTTAACAGCCTTTGTCCG+TGG + Chr4:309706-309725 MsG0480018109.01.T01:intron 45.0%
AGAGGCAATCTGGTATCCAT+TGG + Chr4:313942-313961 MsG0480018109.01.T01:three_prime_UTR 45.0%
ATAGTGACGAGGGACAACAA+GGG - Chr4:312303-312322 None:intergenic 45.0%
ATTATCGGGCTTCATCCTCA+AGG - Chr4:313877-313896 None:intergenic 45.0%
CAGTTTACGAAGAAACCGCT+GGG + Chr4:309575-309594 MsG0480018109.01.T01:intron 45.0%
CATACGAGCTCCTCCATATA+CGG - Chr4:308987-309006 None:intergenic 45.0%
CATTGCTGATGGCATGAATG+GGG + Chr4:309340-309359 MsG0480018109.01.T01:CDS 45.0%
CCCATACCAGGAAAGATCAT+AGG - Chr4:312776-312795 None:intergenic 45.0%
CGGCATACATGAATGGAAAG+GGG - Chr4:314363-314382 None:intergenic 45.0%
CTCCTTCTCAGAATCTTCGA+AGG - Chr4:309014-309033 None:intergenic 45.0%
CTGCTATCGGCATACATGAA+TGG - Chr4:314370-314389 None:intergenic 45.0%
CTTACCTGACCAGTAAGAAG+AGG - Chr4:310760-310779 None:intergenic 45.0%
CTTCTCAGAATCTTCGAAGG+TGG - Chr4:309011-309030 None:intergenic 45.0%
CTTTGTCATAGCTCAGCCAA+AGG + Chr4:313480-313499 MsG0480018109.01.T01:intron 45.0%
GAGTGATATGTGTGTGTGTG+TGG + Chr4:310399-310418 MsG0480018109.01.T01:intron 45.0%
GAGTTGGGTCCTGGAATATT+GGG + Chr4:309728-309747 MsG0480018109.01.T01:CDS 45.0%
GATCCTAACACACCATGTCA+AGG + Chr4:310959-310978 MsG0480018109.01.T01:intron 45.0%
GATCTGGATCAAAAACCCAG+GGG - Chr4:308901-308920 None:intergenic 45.0%
GCTGATACTCCTCTTCTTAC+TGG + Chr4:310748-310767 MsG0480018109.01.T01:CDS 45.0%
GGCAGATTCAACATCTAGGT+GGG + Chr4:311726-311745 MsG0480018109.01.T01:CDS 45.0%
GTCATTGCTGATGGCATGAA+TGG + Chr4:309338-309357 MsG0480018109.01.T01:CDS 45.0%
GTCTACTGCCCAGAAATAAC+AGG - Chr4:311478-311497 None:intergenic 45.0%
GTCTTGTCATTCAGTCACCT+CGG + Chr4:314082-314101 MsG0480018109.01.T01:three_prime_UTR 45.0%
GTGAAACTGGCTACATTTGC+AGG + Chr4:313588-313607 MsG0480018109.01.T01:intron 45.0%
GTTACAGAGACACCAACTCT+AGG - Chr4:312498-312517 None:intergenic 45.0%
GTTCCTTGACATGGTGTGTT+AGG - Chr4:310965-310984 None:intergenic 45.0%
TACATTTGCAGGCAGTAGAG+AGG + Chr4:313599-313618 MsG0480018109.01.T01:intron 45.0%
TACTCCTCTTCTTACTGGTC+AGG + Chr4:310753-310772 MsG0480018109.01.T01:CDS 45.0%
TCAACGGTATGTCCTAGAGT+TGG + Chr4:312483-312502 MsG0480018109.01.T01:intron 45.0%
TCAGTTTACGAAGAAACCGC+TGG + Chr4:309574-309593 MsG0480018109.01.T01:intron 45.0%
TCCCAAACGATGCTTGATGA+GGG - Chr4:313659-313678 None:intergenic 45.0%
TCCCTCGTCACTATGATCTT+TGG + Chr4:312309-312328 MsG0480018109.01.T01:intron 45.0%
TGGCAGATTCAACATCTAGG+TGG + Chr4:311725-311744 MsG0480018109.01.T01:CDS 45.0%
TGGGGAACGTGGAAATGAAA+TGG + Chr4:311091-311110 MsG0480018109.01.T01:CDS 45.0%
TGTTTCTCTGTTGCGTGCTT+TGG + Chr4:309661-309680 MsG0480018109.01.T01:intron 45.0%
TTGCAGGTCTCAGAAATTCG+AGG + Chr4:313775-313794 MsG0480018109.01.T01:intron 45.0%
TTTGTTCCAGCTTGTGGGAA+AGG + Chr4:313041-313060 MsG0480018109.01.T01:intron 45.0%
! ACCCTCATCAAGCATCGTTT+GGG + Chr4:313655-313674 MsG0480018109.01.T01:CDS 45.0%
! CACCTTCGAAGATTCTGAGA+AGG + Chr4:309009-309028 MsG0480018109.01.T01:CDS 45.0%
! TAGAAAAAGCTCGAGAGTGC+AGG - Chr4:310483-310502 None:intergenic 45.0%
! TGGACAAAAAGCTTGCTCAG+AGG + Chr4:312415-312434 MsG0480018109.01.T01:CDS 45.0%
! TGTTGGTCCGTTGTTATTGC+AGG + Chr4:313759-313778 MsG0480018109.01.T01:intron 45.0%
! TTACAACATGAAGTGCCTGC+GGG + Chr4:314171-314190 MsG0480018109.01.T01:three_prime_UTR 45.0%
! TTTTCCCCTCTGTACTTGGT+GGG + Chr4:310871-310890 MsG0480018109.01.T01:CDS 45.0%
!! AGTTTTGATGCAACAGGCCT+AGG - Chr4:310724-310743 None:intergenic 45.0%
!! CATCCAGACCGACTTGTAAA+AGG - Chr4:313270-313289 None:intergenic 45.0%
!! CTGGGTTCTGGATTCATTGA+TGG + Chr4:314204-314223 MsG0480018109.01.T01:three_prime_UTR 45.0%
!! GAAGCATTGCGTGAAATCTC+AGG + Chr4:311751-311770 MsG0480018109.01.T01:CDS 45.0%
!! GCTGCAAGTTTTGATGCAAC+AGG - Chr4:310730-310749 None:intergenic 45.0%
!! GTGGCTTTGTGTTTGTGTTG+TGG - Chr4:308792-308811 None:intergenic 45.0%
!! TGCTACTTGGCAGGTTTTCT+GGG + Chr4:312389-312408 MsG0480018109.01.T01:intron 45.0%
!! TTCCTTTCTTGGCACTGGTT+TGG + Chr4:314029-314048 MsG0480018109.01.T01:three_prime_UTR 45.0%
!! TTGCTACTTGGCAGGTTTTC+TGG + Chr4:312388-312407 MsG0480018109.01.T01:intron 45.0%
!!! ATTATTTATAATATTTTCTA+TGG + Chr4:312584-312603 MsG0480018109.01.T01:intron 5.0%
AAACGTGCAGCAAGGTAAGC+AGG - Chr4:312032-312051 None:intergenic 50.0%
AAGAGGCTAAACGTGCAGCA+AGG - Chr4:312040-312059 None:intergenic 50.0%
AAGCATCCTTTCCCACAAGC+TGG - Chr4:313050-313069 None:intergenic 50.0%
ACAACCGAAAGCTCCAGGTA+TGG - Chr4:310904-310923 None:intergenic 50.0%
ACATGTCCCACCAAGTACAG+AGG - Chr4:310880-310899 None:intergenic 50.0%
ACCTTGTGAGTACGCAACAC+GGG - Chr4:309616-309635 None:intergenic 50.0%
ACTCGGGACATAGCTACCAA+TGG - Chr4:313961-313980 None:intergenic 50.0%
AGCCAAACCAGTGCCAAGAA+AGG - Chr4:314034-314053 None:intergenic 50.0%
ATACCTGGAGCTTTCGGTTG+TGG + Chr4:310903-310922 MsG0480018109.01.T01:CDS 50.0%
ATGCCATCAGCAATGACGAC+AGG - Chr4:309335-309354 None:intergenic 50.0%
ATGTCCCACCAAGTACAGAG+GGG - Chr4:310878-310897 None:intergenic 50.0%
ATTCGAGGATCCAGCTGAAG+GGG + Chr4:313790-313809 MsG0480018109.01.T01:CDS 50.0%
CAAGCTGGAACAAACAGGGA+TGG - Chr4:313035-313054 None:intergenic 50.0%
CACCAAGTACAGAGGGGAAA+AGG - Chr4:310872-310891 None:intergenic 50.0%
CATAGTGACGAGGGACAACA+AGG - Chr4:312304-312323 None:intergenic 50.0%
CATGAAGCGTACGACACTTG+TGG + Chr4:311266-311285 MsG0480018109.01.T01:CDS 50.0%
CATGTCCCACCAAGTACAGA+GGG - Chr4:310879-310898 None:intergenic 50.0%
CATTTGCAGGCAGTAGAGAG+GGG + Chr4:313601-313620 MsG0480018109.01.T01:intron 50.0%
CCCACAAGCTGGAACAAACA+GGG - Chr4:313039-313058 None:intergenic 50.0%
CCCTGTTTGTTCCAGCTTGT+GGG + Chr4:313036-313055 MsG0480018109.01.T01:intron 50.0%
CCTCTTTCTACGAACGTGCT+GGG + Chr4:312054-312073 MsG0480018109.01.T01:CDS 50.0%
CTCCCAAACGATGCTTGATG+AGG - Chr4:313660-313679 None:intergenic 50.0%
GACCTTGTGAGTACGCAACA+CGG - Chr4:309617-309636 None:intergenic 50.0%
GCAGGATATCCACTATCAGC+AGG - Chr4:312014-312033 None:intergenic 50.0%
GCTGACGTCTATATTCCTCG+TGG + Chr4:309895-309914 MsG0480018109.01.T01:CDS 50.0%
GCTTGTGGGAAAGGATGCTT+TGG + Chr4:313050-313069 MsG0480018109.01.T01:intron 50.0%
GGAAAGGATGCTTTGGCTGA+AGG + Chr4:313057-313076 MsG0480018109.01.T01:CDS 50.0%
GGAGTTGGGTCCTGGAATAT+TGG + Chr4:309727-309746 MsG0480018109.01.T01:CDS 50.0%
GGATCAGAGAAATCTCCTCC+AGG - Chr4:312146-312165 None:intergenic 50.0%
GTAACCTTTCCCATGGCATC+AGG - Chr4:310259-310278 None:intergenic 50.0%
GTTACACTACCTGTCCGTTC+AGG - Chr4:312101-312120 None:intergenic 50.0%
GTTACCTATGTAGCACCAGC+TGG + Chr4:310274-310293 MsG0480018109.01.T01:CDS 50.0%
TAACGGTTTCCGCAACCTTG+AGG + Chr4:313859-313878 MsG0480018109.01.T01:CDS 50.0%
TATTCCAGGACCCAACTCCA+CGG - Chr4:309726-309745 None:intergenic 50.0%
TCAGAGAAATCTCCTCCAGG+TGG - Chr4:312143-312162 None:intergenic 50.0%
TCCCACAAGCTGGAACAAAC+AGG - Chr4:313040-313059 None:intergenic 50.0%
TCCCTGTTTGTTCCAGCTTG+TGG + Chr4:313035-313054 MsG0480018109.01.T01:intron 50.0%
TGCAACCCTCAGCATAGTTC+AGG + Chr4:312175-312194 MsG0480018109.01.T01:CDS 50.0%
TGTGCCATACCTGGAGCTTT+CGG + Chr4:310897-310916 MsG0480018109.01.T01:CDS 50.0%
TTCACCATGCTTCAGGTCTG+TGG + Chr4:310588-310607 MsG0480018109.01.T01:intron 50.0%
! CACCCTCATCAAGCATCGTT+TGG + Chr4:313654-313673 MsG0480018109.01.T01:CDS 50.0%
! CTTTTCCCCTCTGTACTTGG+TGG + Chr4:310870-310889 MsG0480018109.01.T01:CDS 50.0%
! GCTACTTGGCAGGTTTTCTG+GGG + Chr4:312390-312409 MsG0480018109.01.T01:intron 50.0%
! GTCCCTTTTACAAGTCGGTC+TGG + Chr4:313264-313283 MsG0480018109.01.T01:CDS 50.0%
! TTCTCTAGGGACAAAAGCCG+AGG - Chr4:314102-314121 None:intergenic 50.0%
!! TGCTTGCCCTTGCTGTTATG+CGG + Chr4:311156-311175 MsG0480018109.01.T01:intron 50.0%
!! TTGGCAGGTTTTCTGGGGAT+TGG + Chr4:312395-312414 MsG0480018109.01.T01:intron 50.0%
!! TTGTCCAGCTGGTGCTACAT+AGG - Chr4:310281-310300 None:intergenic 50.0%
ACAGCCTTTGTCCGTGGAGT+TGG + Chr4:309712-309731 MsG0480018109.01.T01:intron 55.0%
ACAGGCCTAGGTGTACGTAC+AGG - Chr4:310712-310731 None:intergenic 55.0%
ACCTTTCCCATGGCATCAGG+AGG - Chr4:310256-310275 None:intergenic 55.0%
ATGGCCACAGACCTGAAGCA+TGG - Chr4:310595-310614 None:intergenic 55.0%
CAGCCTTTGTCCGTGGAGTT+GGG + Chr4:309713-309732 MsG0480018109.01.T01:intron 55.0%
CCCAGCACGTTCGTAGAAAG+AGG - Chr4:312057-312076 None:intergenic 55.0%
CTGAGGGTTGCAGATGTCAC+GGG - Chr4:312167-312186 None:intergenic 55.0%
CTGGATCAAAAACCCAGGGG+TGG - Chr4:308898-308917 None:intergenic 55.0%
GATCCACATATGTCCGCACC+CGG + Chr4:308721-308740 MsG0480018109.01.T01:five_prime_UTR 55.0%
GCACTTCCTCCTGATGCCAT+GGG + Chr4:310247-310266 MsG0480018109.01.T01:CDS 55.0%
GCCTCTTTCTACGAACGTGC+TGG + Chr4:312053-312072 MsG0480018109.01.T01:CDS 55.0%
GCGGAAATGCCTGCTGATAG+TGG + Chr4:312002-312021 MsG0480018109.01.T01:CDS 55.0%
GCGTGAAATCTCAGGGAGAC+TGG + Chr4:311759-311778 MsG0480018109.01.T01:CDS 55.0%
GCTGAGGGTTGCAGATGTCA+CGG - Chr4:312168-312187 None:intergenic 55.0%
GGACCTGTCGTCATTGCTGA+TGG + Chr4:309329-309348 MsG0480018109.01.T01:CDS 55.0%
GGCATGTGGATTCTGGGTTC+TGG + Chr4:314192-314211 MsG0480018109.01.T01:three_prime_UTR 55.0%
GGGCTTCATCCTCAAGGTTG+CGG - Chr4:313871-313890 None:intergenic 55.0%
GGGGATTCTGCCACTATCCA+AGG + Chr4:309428-309447 MsG0480018109.01.T01:CDS 55.0%
GTGGGTGTGTGTGTGTGTTG+TGG + Chr4:310418-310437 MsG0480018109.01.T01:intron 55.0%
TCCCGTGTTGCGTACTCACA+AGG + Chr4:309612-309631 MsG0480018109.01.T01:CDS 55.0%
TCCTCCTGATGCCATGGGAA+AGG + Chr4:310252-310271 MsG0480018109.01.T01:CDS 55.0%
TTGCCACAACCGAAAGCTCC+AGG - Chr4:310909-310928 None:intergenic 55.0%
! CATCAGGAGGAAGTGCGACA+CGG - Chr4:310243-310262 None:intergenic 55.0%
! CGAAGAAACCGCTGGGTTGA+TGG + Chr4:309582-309601 MsG0480018109.01.T01:CDS 55.0%
! GCCCTTTTCCCCTCTGTACT+TGG + Chr4:310867-310886 MsG0480018109.01.T01:CDS 55.0%
! GTTGGCCTGTACGTACACCT+AGG + Chr4:310704-310723 MsG0480018109.01.T01:CDS 55.0%
! TACGTTGGTTGTGGGGAACG+TGG + Chr4:311080-311099 MsG0480018109.01.T01:CDS 55.0%
AAAGCGGCTTCCCCTTCAGC+TGG - Chr4:313803-313822 None:intergenic 60.0%
AGCTGAAGGGGAAGCCGCTT+TGG + Chr4:313802-313821 MsG0480018109.01.T01:CDS 60.0%
CCTGCGGGCATGTGGATTCT+GGG + Chr4:314186-314205 MsG0480018109.01.T01:three_prime_UTR 60.0%
CGAGCTCCTCCATATACGGC+AGG - Chr4:308983-309002 None:intergenic 60.0%
CGCACTTCCTCCTGATGCCA+TGG + Chr4:310246-310265 MsG0480018109.01.T01:CDS 60.0%
CTCTCTCTCTCTCCACCCCT+GGG + Chr4:308883-308902 MsG0480018109.01.T01:five_prime_UTR 60.0%
CTTGGAGGTCCTGAACGGAC+AGG + Chr4:312089-312108 MsG0480018109.01.T01:CDS 60.0%
GAAGCTTCACGAGCAGCCAC+AGG - Chr4:311309-311328 None:intergenic 60.0%
GGACCCAACTCCACGGACAA+AGG - Chr4:309719-309738 None:intergenic 60.0%
GGTGGGACATGTGCCATACC+TGG + Chr4:310888-310907 MsG0480018109.01.T01:CDS 60.0%
TCAGCAGGCATTTCCGCCTG+TGG - Chr4:311999-312018 None:intergenic 60.0%
TCTCTCTCTCTCTCCACCCC+TGG + Chr4:308882-308901 MsG0480018109.01.T01:five_prime_UTR 60.0%
TGACCGGGTGCGGACATATG+TGG - Chr4:308727-308746 None:intergenic 60.0%
TTGTCCGTGGAGTTGGGTCC+TGG + Chr4:309719-309738 MsG0480018109.01.T01:CDS 60.0%
! ATGAAGTGCCTGCGGGCATG+TGG + Chr4:314178-314197 MsG0480018109.01.T01:three_prime_UTR 60.0%
! GAGAGGGGAGCTGGTACTGA+TGG + Chr4:313616-313635 MsG0480018109.01.T01:CDS 60.0%
!! GGTGCTGTTTCTCCACCTGG+AGG + Chr4:312128-312147 MsG0480018109.01.T01:CDS 60.0%
!! GTCGGTGCTGTTTCTCCACC+TGG + Chr4:312125-312144 MsG0480018109.01.T01:CDS 60.0%
CAGGCAGTAGAGAGGGGAGC+TGG + Chr4:313607-313626 MsG0480018109.01.T01:intron 65.0%
CCCAGAATCCACATGCCCGC+AGG - Chr4:314189-314208 None:intergenic 65.0%
GCAGGAACAGACACGCCACG+AGG - Chr4:309913-309932 None:intergenic 65.0%
GCCTGCGGGCATGTGGATTC+TGG + Chr4:314185-314204 MsG0480018109.01.T01:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 308674 314481 308674 ID=MsG0480018109.01;Name=MsG0480018109.01
Chr4 mRNA 308674 314481 308674 ID=MsG0480018109.01.T01;Parent=MsG0480018109.01;Name=MsG0480018109.01.T01;_AED=0.35;_eAED=0.35;_QI=303|1|1|1|1|1|20|586|624
Chr4 exon 308674 309057 308674 ID=MsG0480018109.01.T01:exon:305;Parent=MsG0480018109.01.T01
Chr4 exon 309323 309449 309323 ID=MsG0480018109.01.T01:exon:306;Parent=MsG0480018109.01.T01
Chr4 exon 309578 309633 309578 ID=MsG0480018109.01.T01:exon:307;Parent=MsG0480018109.01.T01
Chr4 exon 309716 309772 309716 ID=MsG0480018109.01.T01:exon:308;Parent=MsG0480018109.01.T01
Chr4 exon 309865 309976 309865 ID=MsG0480018109.01.T01:exon:309;Parent=MsG0480018109.01.T01
Chr4 exon 310074 310111 310074 ID=MsG0480018109.01.T01:exon:310;Parent=MsG0480018109.01.T01
Chr4 exon 310211 310312 310211 ID=MsG0480018109.01.T01:exon:311;Parent=MsG0480018109.01.T01
Chr4 exon 310546 310602 310546 ID=MsG0480018109.01.T01:exon:312;Parent=MsG0480018109.01.T01
Chr4 exon 310703 310774 310703 ID=MsG0480018109.01.T01:exon:313;Parent=MsG0480018109.01.T01
Chr4 exon 310855 310956 310855 ID=MsG0480018109.01.T01:exon:314;Parent=MsG0480018109.01.T01
Chr4 exon 311056 311118 311056 ID=MsG0480018109.01.T01:exon:315;Parent=MsG0480018109.01.T01
Chr4 exon 311207 311339 311207 ID=MsG0480018109.01.T01:exon:316;Parent=MsG0480018109.01.T01
Chr4 exon 311674 311780 311674 ID=MsG0480018109.01.T01:exon:317;Parent=MsG0480018109.01.T01
Chr4 exon 312002 312196 312002 ID=MsG0480018109.01.T01:exon:318;Parent=MsG0480018109.01.T01
Chr4 exon 312402 312488 312402 ID=MsG0480018109.01.T01:exon:319;Parent=MsG0480018109.01.T01
Chr4 exon 312616 312720 312616 ID=MsG0480018109.01.T01:exon:320;Parent=MsG0480018109.01.T01
Chr4 exon 313051 313148 313051 ID=MsG0480018109.01.T01:exon:321;Parent=MsG0480018109.01.T01
Chr4 exon 313250 313328 313250 ID=MsG0480018109.01.T01:exon:322;Parent=MsG0480018109.01.T01
Chr4 exon 313610 313698 313610 ID=MsG0480018109.01.T01:exon:323;Parent=MsG0480018109.01.T01
Chr4 exon 313781 314481 313781 ID=MsG0480018109.01.T01:exon:324;Parent=MsG0480018109.01.T01
Chr4 five_prime_UTR 308674 308976 308674 ID=MsG0480018109.01.T01:five_prime_utr;Parent=MsG0480018109.01.T01
Chr4 CDS 308977 309057 308977 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 309323 309449 309323 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 309578 309633 309578 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 309716 309772 309716 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 309865 309976 309865 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 310074 310111 310074 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 310211 310312 310211 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 310546 310602 310546 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 310703 310774 310703 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 310855 310956 310855 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 311056 311118 311056 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 311207 311339 311207 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 311674 311780 311674 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 312002 312196 312002 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 312402 312488 312402 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 312616 312720 312616 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 313051 313148 313051 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 313250 313328 313250 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 313610 313698 313610 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 CDS 313781 313895 313781 ID=MsG0480018109.01.T01:cds;Parent=MsG0480018109.01.T01
Chr4 three_prime_UTR 313896 314481 313896 ID=MsG0480018109.01.T01:three_prime_utr;Parent=MsG0480018109.01.T01
Gene Sequence

>MsG0480018109.01.T01

ATGCCTGCCGTATATGGAGGAGCTCGTATGACCACCTTCGAAGATTCTGAGAAGGAGAGTGAATACGGTTATGTTCGCAAGGTGTCTGGACCTGTCGTCATTGCTGATGGCATGAATGGGGCTGCTATGTATGAACTTGTCCGTGTTGGTAATGATAATCTCATCGGTGAAATTATTCGTTTGGAAGGGGATTCTGCCACTATCCAAGTTTACGAAGAAACCGCTGGGTTGATGGTTAATGATCCCGTGTTGCGTACTCACAAGCCTTTGTCCGTGGAGTTGGGTCCTGGAATATTGGGAAATATTTTTGATGGAATTCAGAGGCCATTGAAAACTATTGCAAAAATATCTGCTGACGTCTATATTCCTCGTGGCGTGTCTGTTCCTGCACTTGACAAAGATACACTATGGGAATTTCAGCCTAAGAAAATTGGTGAAGGAGATCTATTAACTGGTGGAGACTTATATGCTACTGTTTTCGAGAACAGTTTAATGGAACACCGTGTCGCACTTCCTCCTGATGCCATGGGAAAGGTTACCTATGTAGCACCAGCTGGACAATATTCCTTGAAGGACACTGTGTTAGAACTTGAGTTTCAAGGTGTCAAAAAGAAGTTCACCATGCTTCAGAGTTGGCCTGTACGTACACCTAGGCCTGTTGCATCAAAACTTGCAGCTGATACTCCTCTTCTTACTGGTCAGCGTGTTCTTGATGCCCTTTTCCCCTCTGTACTTGGTGGGACATGTGCCATACCTGGAGCTTTCGGTTGTGGCAAAACAGTCATTAGTCAAGCTCTTTCTAAGTATTCAAATTCTGATGCTGTTATTTACGTTGGTTGTGGGGAACGTGGAAATGAAATGGCAGAGGTTCTAATGGACTTTCCACAACTTACAATGACATTACCTGATGGTCGTGAAGAATCTGTCATGAAGCGTACGACACTTGTGGCAAACACTTCAAACATGCCTGTGGCTGCTCGTGAAGCTTCAATTTATACAGGAATCACTTTAGCCGAGTATTTTAGAGATATGGGTTACAATGTCAGTATGATGGCAGATTCAACATCTAGGTGGGCAGAAGCATTGCGTGAAATCTCAGGGAGACTGGCGGAAATGCCTGCTGATAGTGGATATCCTGCTTACCTTGCTGCACGTTTAGCCTCTTTCTACGAACGTGCTGGGAAAGTAAAATGTCTTGGAGGTCCTGAACGGACAGGTAGTGTAACAATTGTCGGTGCTGTTTCTCCACCTGGAGGAGATTTCTCTGATCCCGTGACATCTGCAACCCTCAGCATAGTTCAGGTTTTCTGGGGATTGGACAAAAAGCTTGCTCAGAGGAAACACTTTCCTTCTGTGAACTGGCTTATATCTTATTCAAAGTATTCAACGGCACTTGAATCCTTTTACGAGCAATTTGATCCAGATTTTATTAACATTAGGACAAAGGCTCGTGAAGTTCTGCAAAGAGAAGACGATCTGAATGAAATTGTCCAGCTTGTGGGAAAGGATGCTTTGGCTGAAGGAGACAAGATCACCTTAGAAACTGCAAAACTTTTGAGAGAGGATTACCTTGCTCAAAATGCTTTTACGCCATATGACAAGTTCTGTCCCTTTTACAAGTCGGTCTGGATGATGCGCAACATTATTCATTTCTACAATTTGGCAAATCAGGCAGTAGAGAGGGGAGCTGGTACTGATGGTCAGAAGATAACTTACACCCTCATCAAGCATCGTTTGGGAGATCTCTTCTATCGTTTAGTGTCTCAGAAATTCGAGGATCCAGCTGAAGGGGAAGCCGCTTTGGTTGCCAAATTTACTCAGTTACATGAGGACTTGACTAACGGTTTCCGCAACCTTGAGGATGAAGCCCGATAA
Protein sequence

>MsG0480018109.01.T01

MPAVYGGARMTTFEDSEKESEYGYVRKVSGPVVIADGMNGAAMYELVRVGNDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKISADVYIPRGVSVPALDKDTLWEFQPKKIGEGDLLTGGDLYATVFENSLMEHRVALPPDAMGKVTYVAPAGQYSLKDTVLELEFQGVKKKFTMLQSWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDAVIYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGTDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEAALVAKFTQLHEDLTNGFRNLEDEAR*