Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018429.01.T01 | XP_013454710.1 | 91.431 | 1062 | 37 | 2 | 1 | 1008 | 1 | 1062 | 0 | 1989 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018429.01.T01 | A0A072UH44 | 91.431 | 1062 | 37 | 2 | 1 | 1008 | 1 | 1062 | 0.0 | 1989 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0480018429.01 | MsG0880045900.01 | 0.800701 | 1.273817e-48 | 5.970722e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018429.01.T01 | MTR_4g011610 | 91.431 | 1062 | 37 | 2 | 1 | 1008 | 1 | 1062 | 0.0 | 1989 |
MsG0480018429.01.T01 | MTR_3g464360 | 91.000 | 100 | 9 | 0 | 909 | 1008 | 12 | 111 | 1.25e-55 | 188 |
MsG0480018429.01.T01 | MTR_2g013640 | 31.111 | 405 | 258 | 6 | 559 | 957 | 522 | 911 | 8.26e-48 | 185 |
MsG0480018429.01.T01 | MTR_2g079300 | 31.316 | 380 | 233 | 12 | 581 | 957 | 531 | 885 | 3.21e-44 | 174 |
MsG0480018429.01.T01 | MTR_2g079310 | 29.288 | 379 | 232 | 10 | 581 | 957 | 561 | 905 | 6.62e-37 | 150 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018429.01.T01 | AT1G52780 | 51.210 | 1033 | 408 | 20 | 43 | 1004 | 52 | 1059 | 0.0 | 991 |
MsG0480018429.01.T01 | AT4G21700 | 27.366 | 391 | 256 | 8 | 578 | 957 | 556 | 929 | 1.31e-38 | 156 |
Find 222 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCAATTATTCTTGCAATTT+TGG | 0.024448 | 4:+4774870 | MsG0480018429.01.T01:CDS |
ACATTAAGTTTCCAATGATT+TGG | 0.235911 | 4:-4774660 | None:intergenic |
CATTAAGTTTCCAATGATTT+GGG | 0.246581 | 4:-4774659 | None:intergenic |
TGTTAATGGGGATTGGATTC+AGG | 0.259264 | 4:+4772120 | MsG0480018429.01.T01:CDS |
ATGTTATCTTTATACGGATA+TGG | 0.259788 | 4:-4772754 | None:intergenic |
TTCTCATTCGTTGCCGGATT+GGG | 0.262464 | 4:+4774585 | MsG0480018429.01.T01:CDS |
GACCCATGTTTGGGCGTTAT+TGG | 0.269185 | 4:+4773612 | MsG0480018429.01.T01:CDS |
CCATTATGCCATTTGATGAT+AGG | 0.272141 | 4:+4772158 | MsG0480018429.01.T01:CDS |
CTGAGTCAGGTTCTGACATT+TGG | 0.278689 | 4:+4774925 | MsG0480018429.01.T01:CDS |
AATGTCTCATCTTCAAGTTT+AGG | 0.280996 | 4:-4773470 | None:intergenic |
ATGTCTCATCTTCAAGTTTA+GGG | 0.282863 | 4:-4773469 | None:intergenic |
CCTATCATCAAATGGCATAA+TGG | 0.283131 | 4:-4772158 | None:intergenic |
ATCACCATGAAACCATTAAT+AGG | 0.290262 | 4:-4772292 | None:intergenic |
TGCTGCATTGTATCGATTCT+CGG | 0.293597 | 4:-4773064 | None:intergenic |
AAGAAGTCGATCCCTATTAA+TGG | 0.293623 | 4:+4772280 | MsG0480018429.01.T01:CDS |
CTCTCCGTTGGACCCATGTT+TGG | 0.294322 | 4:+4773602 | MsG0480018429.01.T01:CDS |
ATGGACAATGTGTATGATAA+TGG | 0.298181 | 4:+4772340 | MsG0480018429.01.T01:CDS |
AGAATTTATCAACCCAAGTT+TGG | 0.303306 | 4:+4774807 | MsG0480018429.01.T01:CDS |
CGTTGCTTTCTGTATATGAT+TGG | 0.303722 | 4:-4774034 | None:intergenic |
CAGTTTGGTACAACAGATAA+AGG | 0.305831 | 4:-4772850 | None:intergenic |
CGTTATTGGTATGCTCAAAA+TGG | 0.312147 | 4:+4773626 | MsG0480018429.01.T01:CDS |
GGTCTATATTCAACAAAGAT+TGG | 0.313885 | 4:+4774891 | MsG0480018429.01.T01:CDS |
TTTGAAACTGAACTAGTTCC+AGG | 0.314766 | 4:+4775000 | MsG0480018429.01.T01:CDS |
TCCTCAGAAAAGTATGGATT+TGG | 0.324481 | 4:-4774781 | None:intergenic |
GTTGGAAAGATGTATCTTAT+TGG | 0.326800 | 4:+4773806 | MsG0480018429.01.T01:CDS |
CAGCTTTCGATTCCCTTTCA+AGG | 0.327207 | 4:+4772397 | MsG0480018429.01.T01:CDS |
TCACAGTGTAATCAATGATA+TGG | 0.328329 | 4:-4774321 | None:intergenic |
TCTGTCATGTTATCTTTATA+CGG | 0.329695 | 4:-4772760 | None:intergenic |
TTTGATTATGGTGGTGTTGT+TGG | 0.336917 | 4:+4772076 | MsG0480018429.01.T01:CDS |
CTATCATCAAATGGCATAAT+GGG | 0.338103 | 4:-4772157 | None:intergenic |
TCTGCAGCATTTGCATGATA+TGG | 0.339777 | 4:-4773674 | None:intergenic |
GCGTGGTAGTCCGATGAAAT+TGG | 0.339940 | 4:+4772216 | MsG0480018429.01.T01:CDS |
CTTTATCTGTTGTACCAAAC+TGG | 0.343089 | 4:+4772851 | MsG0480018429.01.T01:CDS |
TGACGTTCACTTTGACGAAT+AGG | 0.344532 | 4:+4772593 | MsG0480018429.01.T01:CDS |
TCTGATTTGAGGTTTGATTA+TGG | 0.346892 | 4:+4772064 | MsG0480018429.01.T01:CDS |
GAGAGGGTGTTGTGTTTGCT+AGG | 0.362217 | 4:+4772451 | MsG0480018429.01.T01:CDS |
AGAGAATTCTCATTCGTTGC+CGG | 0.363213 | 4:+4774579 | MsG0480018429.01.T01:CDS |
GATGATTTCTGCAGTAGATT+AGG | 0.363294 | 4:+4772889 | MsG0480018429.01.T01:CDS |
CTCAGGAAGCTGTATTTCAT+TGG | 0.365594 | 4:+4774703 | MsG0480018429.01.T01:CDS |
TCTCCGTTGGACCCATGTTT+GGG | 0.372502 | 4:+4773603 | MsG0480018429.01.T01:CDS |
TCTGAGTCCTCAGAAAAGTA+TGG | 0.372548 | 4:-4774787 | None:intergenic |
GATCCCTATTAATGGTTTCA+TGG | 0.380725 | 4:+4772288 | MsG0480018429.01.T01:CDS |
TATCTGCTGCATCTGATTTG+AGG | 0.382376 | 4:+4772053 | MsG0480018429.01.T01:CDS |
GTGCTAGGTGTTCAATCTCT+TGG | 0.386982 | 4:+4774193 | MsG0480018429.01.T01:CDS |
TGTATATGATTGGAAAAGTC+TGG | 0.387820 | 4:-4774024 | None:intergenic |
GCCGGATTGGGCGAAGGAAT+TGG | 0.389094 | 4:+4774597 | MsG0480018429.01.T01:CDS |
TTGACGAATAGGATGATAAC+TGG | 0.391322 | 4:+4772604 | MsG0480018429.01.T01:CDS |
CGCTTGCTACCGAAGGGATC+TGG | 0.391624 | 4:+4773112 | MsG0480018429.01.T01:CDS |
CGATCCTATGCCTCGTGTGC+AGG | 0.394872 | 4:+4773550 | MsG0480018429.01.T01:CDS |
TTCTTGTTTCCCCAAATCAT+TGG | 0.395299 | 4:+4774649 | MsG0480018429.01.T01:CDS |
CTCCCATGGATTCGCAGGAT+TGG | 0.396520 | 4:-4772500 | None:intergenic |
TCGTATGATGTGTCGTCATC+TGG | 0.403840 | 4:+4774274 | MsG0480018429.01.T01:CDS |
GTCTATATTCAACAAAGATT+GGG | 0.403870 | 4:+4774892 | MsG0480018429.01.T01:CDS |
CAAAGAAAACAAAGAGCTAT+AGG | 0.407973 | 4:-4771902 | None:intergenic |
ATTCTCATTCGTTGCCGGAT+TGG | 0.408016 | 4:+4774584 | MsG0480018429.01.T01:CDS |
CAGAGCTATGATCTTGAGTC+TGG | 0.408744 | 4:+4773866 | MsG0480018429.01.T01:CDS |
TGCTTTGGATAAAATATGTT+GGG | 0.412355 | 4:-4772725 | None:intergenic |
AGCACAACAAGAGATATATA+TGG | 0.417099 | 4:-4774175 | None:intergenic |
AGTCTTAGCGGGAAAGGTTA+TGG | 0.422438 | 4:+4773740 | MsG0480018429.01.T01:CDS |
TGATAGGAATGATAATTTGC+CGG | 0.423421 | 4:+4772174 | MsG0480018429.01.T01:CDS |
TCACCATGAAACCATTAATA+GGG | 0.423859 | 4:-4772291 | None:intergenic |
TGTTCTGAGATTCTTCTGAC+TGG | 0.423964 | 4:-4774536 | None:intergenic |
CGGATATGGATCACATGCTT+TGG | 0.424010 | 4:-4772740 | None:intergenic |
GCAGCTGGTCATAGTAATAC+TGG | 0.424134 | 4:+4773000 | MsG0480018429.01.T01:CDS |
TATCTCTAGTAACTTCTTCA+AGG | 0.428854 | 4:-4772825 | None:intergenic |
GTACCATTGCATCTCCAGTT+TGG | 0.430538 | 4:-4772865 | None:intergenic |
TCCAATTCCTTCGCCCAATC+CGG | 0.432668 | 4:-4774598 | None:intergenic |
AGCTTTCGATTCCCTTTCAA+GGG | 0.443359 | 4:+4772398 | MsG0480018429.01.T01:CDS |
TGTGTCGTCATCTGGTACTT+TGG | 0.443665 | 4:+4774282 | MsG0480018429.01.T01:CDS |
TCTATAGAAATTGTGGCAGT+GGG | 0.443741 | 4:-4773953 | None:intergenic |
TATTAATGGTTTCATGGTGA+TGG | 0.445587 | 4:+4772294 | MsG0480018429.01.T01:CDS |
GATAGGAATGATAATTTGCC+GGG | 0.447716 | 4:+4772175 | MsG0480018429.01.T01:CDS |
TCATTGGAATCACTGTAGTA+AGG | 0.450441 | 4:+4774719 | MsG0480018429.01.T01:CDS |
TGAGTCAGGTTCTGACATTT+GGG | 0.456909 | 4:+4774926 | MsG0480018429.01.T01:CDS |
GCAGGATTGGTTTCTCGAGT+TGG | 0.458113 | 4:-4772487 | None:intergenic |
AAACACCGCAGACACCTTAG+TGG | 0.458415 | 4:-4773025 | None:intergenic |
ACCTTCGCCTTACATATCAT+TGG | 0.459323 | 4:+4774478 | MsG0480018429.01.T01:CDS |
AGATGTTAAACTTTATATGC+AGG | 0.459891 | 4:+4772960 | MsG0480018429.01.T01:CDS |
AAGTGAGATCTTCTGAAAGA+AGG | 0.467184 | 4:-4773508 | None:intergenic |
TTCTATAGAAATTGTGGCAG+TGG | 0.467695 | 4:-4773954 | None:intergenic |
CCATCTGAATATCAACTCTC+GGG | 0.470434 | 4:-4773574 | None:intergenic |
AGGAAATGTATAGATTTGAT+AGG | 0.473479 | 4:+4771966 | MsG0480018429.01.T01:CDS |
GAAAAGTATGGATTTGGAAC+CGG | 0.474078 | 4:-4774775 | None:intergenic |
TTCGTCAAAGTGAACGTCAA+TGG | 0.474218 | 4:-4772589 | None:intergenic |
TATATATCTCTTGTTGTGCT+AGG | 0.475305 | 4:+4774178 | MsG0480018429.01.T01:CDS |
AAACCAATCCTGCGAATCCA+TGG | 0.477479 | 4:+4772497 | MsG0480018429.01.T01:CDS |
GCAAGAATAATTGCAGTCAC+AGG | 0.479032 | 4:-4774862 | None:intergenic |
TGGACAATGTGTATGATAAT+GGG | 0.483582 | 4:+4772341 | MsG0480018429.01.T01:CDS |
GGTGGTGTTGTTGGTATGAA+AGG | 0.484254 | 4:+4772085 | MsG0480018429.01.T01:CDS |
ATCCACTCCCATGGATTCGC+AGG | 0.485065 | 4:-4772505 | None:intergenic |
GGGCTATGACAAGCTGAGTC+AGG | 0.485375 | 4:+4774912 | MsG0480018429.01.T01:CDS |
TCCATCTGAATATCAACTCT+CGG | 0.486650 | 4:-4773575 | None:intergenic |
CCGAGTTGTCGTCGGAGGAT+AGG | 0.488030 | 4:-4773918 | None:intergenic |
TATGTAACCAATGATATGTA+AGG | 0.489763 | 4:-4774485 | None:intergenic |
AGTGAGATCTTCTGAAAGAA+GGG | 0.489835 | 4:-4773507 | None:intergenic |
ATGCTTTGGATAAAATATGT+TGG | 0.494155 | 4:-4772726 | None:intergenic |
TTATCATTCCTATCATCAAA+TGG | 0.494662 | 4:-4772166 | None:intergenic |
ATATGATTACATTCGAGCTC+CGG | 0.496273 | 4:+4774756 | MsG0480018429.01.T01:CDS |
CGAAGAGAAACGGTGGGGAG+AGG | 0.499132 | 4:+4772434 | MsG0480018429.01.T01:CDS |
TTCAGTGTAAACCCCTTGAA+AGG | 0.505751 | 4:-4772410 | None:intergenic |
TGCACACGAGGCATAGGATC+GGG | 0.506191 | 4:-4773548 | None:intergenic |
CAGATGTTGATCATGCTCAT+AGG | 0.506286 | 4:+4772254 | MsG0480018429.01.T01:CDS |
TTCTGACATAGGTACATCAC+TGG | 0.506920 | 4:-4772536 | None:intergenic |
CGAATGTAATCATATATATG+AGG | 0.510676 | 4:-4774748 | None:intergenic |
TTGACTTTCTATAGAAATTG+TGG | 0.511349 | 4:-4773960 | None:intergenic |
GGGGCCTGCACACGAGGCAT+AGG | 0.512168 | 4:-4773554 | None:intergenic |
ATTAATGGTTTCATGGTGAT+GGG | 0.514498 | 4:+4772295 | MsG0480018429.01.T01:CDS |
TGGAACTAGTTCAGTTTCAA+AGG | 0.517458 | 4:-4774998 | None:intergenic |
ATTTGATCATCTTCTGACAT+AGG | 0.518471 | 4:-4772547 | None:intergenic |
TACAATGCAGCAAAGAGATC+CGG | 0.519908 | 4:+4773075 | MsG0480018429.01.T01:CDS |
TTCGTTGCCGGATTGGGCGA+AGG | 0.523327 | 4:+4774591 | MsG0480018429.01.T01:CDS |
CTTTCACAAAGAGGCGTCGA+AGG | 0.524754 | 4:+4774067 | MsG0480018429.01.T01:CDS |
CCTATCCTCCGACGACAACT+CGG | 0.526050 | 4:+4773918 | MsG0480018429.01.T01:CDS |
ACTCTCGGGGCCTGCACACG+AGG | 0.528489 | 4:-4773560 | None:intergenic |
GGGGATTGGATTCAGGAGGA+TGG | 0.529222 | 4:+4772127 | MsG0480018429.01.T01:CDS |
TCAAATCTATACATTTCCTC+AGG | 0.529340 | 4:-4771962 | None:intergenic |
GCTTCCTGAGTGGTTTGCAA+TGG | 0.530424 | 4:-4774690 | None:intergenic |
CTTCGACGCCTCTTTGTGAA+AGG | 0.532061 | 4:-4774066 | None:intergenic |
CTATGATCTTGAGTCTGGAA+TGG | 0.532139 | 4:+4773871 | MsG0480018429.01.T01:CDS |
AGAAGATTTCCAGATCCCTT+CGG | 0.533850 | 4:-4773121 | None:intergenic |
AACCTTTCATATCTAAAAGT+AGG | 0.534142 | 4:-4774964 | None:intergenic |
GGTTCACATATCATCGCAGT+TGG | 0.534330 | 4:+4772675 | MsG0480018429.01.T01:CDS |
GAACTAGTTCCAGGTATCAA+TGG | 0.535117 | 4:+4775009 | MsG0480018429.01.T01:CDS |
TTAACACTTACATTGGCAGT+TGG | 0.535291 | 4:+4774103 | MsG0480018429.01.T01:CDS |
GTTATCTGTGAGCAAGCAGC+TGG | 0.535933 | 4:+4772985 | MsG0480018429.01.T01:CDS |
TCAAGGATTTCACAAAACCT+TGG | 0.536209 | 4:-4772808 | None:intergenic |
GAGGCGTCGAAGGGATTCTC+CGG | 0.537519 | 4:+4774077 | MsG0480018429.01.T01:CDS |
GAAGAGAAACGGTGGGGAGA+GGG | 0.542951 | 4:+4772435 | MsG0480018429.01.T01:CDS |
CTGCACAACTGAGTCTTAGC+GGG | 0.543307 | 4:+4773729 | MsG0480018429.01.T01:CDS |
AGAAGATGATCAAATTCTGT+TGG | 0.543445 | 4:+4772555 | MsG0480018429.01.T01:CDS |
ATACCAATAACGCCCAAACA+TGG | 0.543940 | 4:-4773615 | None:intergenic |
TGACGACACATCATACGATT+CGG | 0.544582 | 4:-4774269 | None:intergenic |
TACACTGAATCGAAGAGAAA+CGG | 0.545248 | 4:+4772424 | MsG0480018429.01.T01:CDS |
CCAATGTAAGTGTTAAGATC+CGG | 0.545290 | 4:-4774096 | None:intergenic |
CTAAAAGACACCAATTTCAT+CGG | 0.545620 | 4:-4772226 | None:intergenic |
CAACTGAGTCTTAGCGGGAA+AGG | 0.545727 | 4:+4773734 | MsG0480018429.01.T01:CDS |
GGTCTTTATGATCCACATGT+TGG | 0.547923 | 4:+4773788 | MsG0480018429.01.T01:CDS |
AGAGGGTGTTGTGTTTGCTA+GGG | 0.548506 | 4:+4772452 | MsG0480018429.01.T01:CDS |
TAATGGGGATTGGATTCAGG+AGG | 0.548631 | 4:+4772123 | MsG0480018429.01.T01:CDS |
ATCCTGCGAATCCATGGGAG+TGG | 0.550077 | 4:+4772503 | MsG0480018429.01.T01:CDS |
TTCTAGTGGACAGCTTTGCA+TGG | 0.553041 | 4:+4773140 | MsG0480018429.01.T01:CDS |
TCACCACCACCATTGATACC+TGG | 0.554146 | 4:-4775018 | None:intergenic |
TCAGTGTAAACCCCTTGAAA+GGG | 0.558492 | 4:-4772409 | None:intergenic |
CTGCACACGAGGCATAGGAT+CGG | 0.559547 | 4:-4773549 | None:intergenic |
TAGTAATACTGGTTCCACTA+AGG | 0.561520 | 4:+4773011 | MsG0480018429.01.T01:CDS |
TTCAGAAAGTGTGGAAGTCG+CGG | 0.562895 | 4:+4774386 | MsG0480018429.01.T01:CDS |
ATGAAGTAAAGAAACAATGT+GGG | 0.563422 | 4:+4772023 | MsG0480018429.01.T01:CDS |
GATGAAGTAAAGAAACAATG+TGG | 0.563950 | 4:+4772022 | MsG0480018429.01.T01:CDS |
AACATGTCGCTTGCTACCGA+AGG | 0.566843 | 4:+4773105 | MsG0480018429.01.T01:CDS |
ATCGAAAGCTGAGAATGTCC+AGG | 0.567028 | 4:-4772385 | None:intergenic |
GATTTGAGGTTTGATTATGG+TGG | 0.567973 | 4:+4772067 | MsG0480018429.01.T01:CDS |
ATGTCATTAGTGTCTACAAA+GGG | 0.571463 | 4:+4772785 | MsG0480018429.01.T01:CDS |
AGTATTTAGAATTCGAATCA+CGG | 0.572603 | 4:-4772645 | None:intergenic |
TAGCAACGATTTCTTAATGA+CGG | 0.574040 | 4:-4773441 | None:intergenic |
AAATAATTCCAGAGTTCTGT+AGG | 0.576696 | 4:-4773332 | None:intergenic |
CCGGATCTTAACACTTACAT+TGG | 0.577654 | 4:+4774096 | MsG0480018429.01.T01:CDS |
GGACCGACGATGATACTCTT+CGG | 0.579727 | 4:+4773984 | MsG0480018429.01.T01:CDS |
GTTCACATATCATCGCAGTT+GGG | 0.580342 | 4:+4772676 | MsG0480018429.01.T01:CDS |
AGATACATCTTTCCAACATG+TGG | 0.583538 | 4:-4773800 | None:intergenic |
ACCAATGATATGTAAGGCGA+AGG | 0.583751 | 4:-4774479 | None:intergenic |
GAATTCTAAATACTTTGATG+TGG | 0.584233 | 4:+4772654 | MsG0480018429.01.T01:CDS |
AAATCCATTGCAAACCACTC+AGG | 0.587604 | 4:+4774686 | MsG0480018429.01.T01:CDS |
ATTAAGTTTCCAATGATTTG+GGG | 0.587727 | 4:-4774658 | None:intergenic |
TGGAATGGACTGTTTAATTG+AGG | 0.588014 | 4:+4773886 | MsG0480018429.01.T01:CDS |
GACACAATGCGGCTCAGAAG+AGG | 0.589472 | 4:-4774428 | None:intergenic |
TCTGCACAACTGAGTCTTAG+CGG | 0.591180 | 4:+4773728 | MsG0480018429.01.T01:CDS |
CAAGAATAATTGCAGTCACA+GGG | 0.591579 | 4:-4774861 | None:intergenic |
TTGGGAGTCAAATGTGAACT+TGG | 0.593665 | 4:-4772707 | None:intergenic |
AAGGAATTGGAAGAATATGC+AGG | 0.599727 | 4:+4774610 | MsG0480018429.01.T01:CDS |
AACCAATCCTGCGAATCCAT+GGG | 0.599738 | 4:+4772498 | MsG0480018429.01.T01:CDS |
TTGTGTTACCTACAGAACTC+TGG | 0.602229 | 4:+4773324 | MsG0480018429.01.T01:CDS |
GTTCCAGGTATCAATGGTGG+TGG | 0.602321 | 4:+4775015 | MsG0480018429.01.T01:CDS |
GTGATGGGAATTACTAGAGA+TGG | 0.602736 | 4:+4772310 | MsG0480018429.01.T01:CDS |
AGCTAGTTCACAGTTTCCTG+AGG | 0.605725 | 4:+4771946 | MsG0480018429.01.T01:CDS |
AATAATTGCAGTCACAGGGA+TGG | 0.608164 | 4:-4774857 | None:intergenic |
ACGCCCAAACATGGGTCCAA+CGG | 0.608166 | 4:-4773606 | None:intergenic |
TTAGTGTCTACAAAGGGCCA+AGG | 0.608427 | 4:+4772791 | MsG0480018429.01.T01:CDS |
AGCCACCGAGTTGTCGTCGG+AGG | 0.608910 | 4:-4773923 | None:intergenic |
CAGATGGAGATACTCTCCGT+TGG | 0.609299 | 4:+4773590 | MsG0480018429.01.T01:CDS |
TTTCACAAAGAGGCGTCGAA+GGG | 0.611149 | 4:+4774068 | MsG0480018429.01.T01:CDS |
TACCAATAACGCCCAAACAT+GGG | 0.611853 | 4:-4773614 | None:intergenic |
GGGATCTGGAAATCTTCTAG+TGG | 0.613176 | 4:+4773126 | MsG0480018429.01.T01:CDS |
ATTTGATAGGAAATCTCATG+TGG | 0.615496 | 4:+4771979 | MsG0480018429.01.T01:CDS |
AATGTCATTAGTGTCTACAA+AGG | 0.615661 | 4:+4772784 | MsG0480018429.01.T01:CDS |
CCCGAGAGTTGATATTCAGA+TGG | 0.617966 | 4:+4773574 | MsG0480018429.01.T01:CDS |
GGTGTCTGCGGTGTTTAGAG+CGG | 0.617999 | 4:+4773032 | MsG0480018429.01.T01:CDS |
GCTTTCGATTCCCTTTCAAG+GGG | 0.625094 | 4:+4772399 | MsG0480018429.01.T01:CDS |
CAATTTCTATAGAAAGTCAA+AGG | 0.629956 | 4:+4773963 | MsG0480018429.01.T01:CDS |
GCATTGTATCGATTCTCGGA+TGG | 0.634359 | 4:-4773060 | None:intergenic |
TGGTTCCACTAAGGTGTCTG+CGG | 0.636979 | 4:+4773020 | MsG0480018429.01.T01:CDS |
CTGAATCGAAGAGAAACGGT+GGG | 0.638224 | 4:+4772428 | MsG0480018429.01.T01:CDS |
AATGGACTGTTTAATTGAGG+TGG | 0.638598 | 4:+4773889 | MsG0480018429.01.T01:CDS |
GCTTCTGCATCTGTGACTAG+AGG | 0.640746 | 4:-4774226 | None:intergenic |
AAGCGACATGTTGTTGACAC+CGG | 0.646984 | 4:-4773094 | None:intergenic |
TAGGAATGATAATTTGCCGG+GGG | 0.649947 | 4:+4772177 | MsG0480018429.01.T01:CDS |
ATGAAATACAGCTTCCTGAG+TGG | 0.650636 | 4:-4774700 | None:intergenic |
ACATGTCGCTTGCTACCGAA+GGG | 0.654577 | 4:+4773106 | MsG0480018429.01.T01:CDS |
AAATCATTGGAAACTTAATG+TGG | 0.654710 | 4:+4774662 | MsG0480018429.01.T01:CDS |
GAGAGAATCAAATCGACACA+TGG | 0.655302 | 4:+4772928 | MsG0480018429.01.T01:CDS |
GAGGATGTCCTTTCACAAAG+AGG | 0.659913 | 4:+4774058 | MsG0480018429.01.T01:CDS |
TGCTCAAAATGGTTCAACTG+AGG | 0.660852 | 4:+4773637 | MsG0480018429.01.T01:CDS |
CTAGTTCCAGGTATCAATGG+TGG | 0.661988 | 4:+4775012 | MsG0480018429.01.T01:CDS |
ACTAGCCACCGAGTTGTCGT+CGG | 0.664018 | 4:-4773926 | None:intergenic |
CTATAGAAATTGTGGCAGTG+GGG | 0.672403 | 4:-4773952 | None:intergenic |
ATAGGAATGATAATTTGCCG+GGG | 0.674880 | 4:+4772176 | MsG0480018429.01.T01:CDS |
TATCGTTGCTGCTAACCCTG+CGG | 0.675722 | 4:+4774359 | MsG0480018429.01.T01:CDS |
GTACCAAACTGGAGATGCAA+TGG | 0.678491 | 4:+4772862 | MsG0480018429.01.T01:CDS |
AGAATCAAATCGACACATGG+AGG | 0.680478 | 4:+4772931 | MsG0480018429.01.T01:CDS |
TCTGACATAGGTACATCACT+GGG | 0.684304 | 4:-4772535 | None:intergenic |
ACTGAATCGAAGAGAAACGG+TGG | 0.685220 | 4:+4772427 | MsG0480018429.01.T01:CDS |
TTTGATAGGAAATCTCATGT+GGG | 0.686561 | 4:+4771980 | MsG0480018429.01.T01:CDS |
GTACTTTGGAGAACAGTGAG+TGG | 0.694108 | 4:+4774296 | MsG0480018429.01.T01:CDS |
TTATCAGTGGGGACACAATG+CGG | 0.694308 | 4:-4774439 | None:intergenic |
CATATACAGAAAGCAACGTG+AGG | 0.695447 | 4:+4774039 | MsG0480018429.01.T01:CDS |
CATCTGAATATCAACTCTCG+GGG | 0.698389 | 4:-4773573 | None:intergenic |
ATCCTCCGACGACAACTCGG+TGG | 0.702400 | 4:+4773921 | MsG0480018429.01.T01:CDS |
GAACCGAAGAGTATCATCGT+CGG | 0.709476 | 4:-4773987 | None:intergenic |
TGAATCGAAGAGAAACGGTG+GGG | 0.716303 | 4:+4772429 | MsG0480018429.01.T01:CDS |
AGGAATGATAATTTGCCGGG+GGG | 0.723634 | 4:+4772178 | MsG0480018429.01.T01:CDS |
GCAGAGACGTGCGAGCATCG+TGG | 0.727992 | 4:+4773831 | MsG0480018429.01.T01:CDS |
AATTTCATCGGACTACCACG+CGG | 0.734370 | 4:-4772214 | None:intergenic |
GGTTTGTCAGGAGATCCGCG+TGG | 0.824979 | 4:+4772199 | MsG0480018429.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TACTCAAAAATTAATATTGC+TGG | + | Chr4:4773380-4773399 | MsG0480018429.01.T01:CDS | 20.0% |
!!! | AAAACAACATAGCATTATTT+TGG | + | Chr4:4773245-4773264 | MsG0480018429.01.T01:intron | 20.0% |
!!! | AAACAACATAGCATTATTTT+GGG | + | Chr4:4773246-4773265 | MsG0480018429.01.T01:intron | 20.0% |
!!! | AATAATGCTATGTTGTTTTA+TGG | - | Chr4:4773244-4773263 | None:intergenic | 20.0% |
!!! | ATTTTTGAGTAACTGTAATT+CGG | - | Chr4:4773371-4773390 | None:intergenic | 20.0% |
! | AAATCATTGGAAACTTAATG+TGG | + | Chr4:4774662-4774681 | MsG0480018429.01.T01:CDS | 25.0% |
! | AACCTTTCATATCTAAAAGT+AGG | - | Chr4:4774967-4774986 | None:intergenic | 25.0% |
! | ACATTAAGTTTCCAATGATT+TGG | - | Chr4:4774663-4774682 | None:intergenic | 25.0% |
! | AGATGTTAAACTTTATATGC+AGG | + | Chr4:4772960-4772979 | MsG0480018429.01.T01:CDS | 25.0% |
! | AGGAAATGTATAGATTTGAT+AGG | + | Chr4:4771966-4771985 | MsG0480018429.01.T01:CDS | 25.0% |
! | ATGAAGTAAAGAAACAATGT+GGG | + | Chr4:4772023-4772042 | MsG0480018429.01.T01:CDS | 25.0% |
! | ATGTTATCTTTATACGGATA+TGG | - | Chr4:4772757-4772776 | None:intergenic | 25.0% |
! | ATTAAGTTTCCAATGATTTG+GGG | - | Chr4:4774661-4774680 | None:intergenic | 25.0% |
! | CAATTTCTATAGAAAGTCAA+AGG | + | Chr4:4773963-4773982 | MsG0480018429.01.T01:CDS | 25.0% |
! | CATTAAGTTTCCAATGATTT+GGG | - | Chr4:4774662-4774681 | None:intergenic | 25.0% |
! | CGAATGTAATCATATATATG+AGG | - | Chr4:4774751-4774770 | None:intergenic | 25.0% |
! | GAATTCTAAATACTTTGATG+TGG | + | Chr4:4772654-4772673 | MsG0480018429.01.T01:CDS | 25.0% |
! | GTCTATATTCAACAAAGATT+GGG | + | Chr4:4774892-4774911 | MsG0480018429.01.T01:CDS | 25.0% |
! | TATGTAACCAATGATATGTA+AGG | - | Chr4:4774488-4774507 | None:intergenic | 25.0% |
! | TCTGTCATGTTATCTTTATA+CGG | - | Chr4:4772763-4772782 | None:intergenic | 25.0% |
! | TGTGCTTTATGTAAAAAAGT+TGG | - | Chr4:4774141-4774160 | None:intergenic | 25.0% |
! | TTATCATTCCTATCATCAAA+TGG | - | Chr4:4772169-4772188 | None:intergenic | 25.0% |
! | TTCAAATGATAGAGGAAAAA+AGG | - | Chr4:4773300-4773319 | None:intergenic | 25.0% |
! | TTGACTTTCTATAGAAATTG+TGG | - | Chr4:4773963-4773982 | None:intergenic | 25.0% |
!! | AGTATTTAGAATTCGAATCA+CGG | - | Chr4:4772648-4772667 | None:intergenic | 25.0% |
!! | ATGCTTTGGATAAAATATGT+TGG | - | Chr4:4772729-4772748 | None:intergenic | 25.0% |
!! | TACTAGAGATGGTAATTTTA+TGG | + | Chr4:4772321-4772340 | MsG0480018429.01.T01:CDS | 25.0% |
!! | TACTTTTAGATATGAAAGGT+TGG | + | Chr4:4774966-4774985 | MsG0480018429.01.T01:CDS | 25.0% |
!! | TGCAATTATTCTTGCAATTT+TGG | + | Chr4:4774870-4774889 | MsG0480018429.01.T01:CDS | 25.0% |
!! | TGCTTTGGATAAAATATGTT+GGG | - | Chr4:4772728-4772747 | None:intergenic | 25.0% |
!! | TTGGATTTTTACTCGAAATT+TGG | + | Chr4:4774826-4774845 | MsG0480018429.01.T01:CDS | 25.0% |
!! | TTGTTTTCTTTGTCAATTGT+TGG | + | Chr4:4771913-4771932 | MsG0480018429.01.T01:CDS | 25.0% |
!! | TTTTTACATAAAGCACAATG+TGG | + | Chr4:4774144-4774163 | MsG0480018429.01.T01:CDS | 25.0% |
!!! | AAAGGCACTATTGTTATTAA+TGG | - | Chr4:4773282-4773301 | None:intergenic | 25.0% |
!!! | AAGAAGTACTTTTTTATCAG+TGG | - | Chr4:4774455-4774474 | None:intergenic | 25.0% |
!!! | AGAAGTACTTTTTTATCAGT+GGG | - | Chr4:4774454-4774473 | None:intergenic | 25.0% |
!!! | ATAATGGGAATCTTGATTTT+CGG | + | Chr4:4772356-4772375 | MsG0480018429.01.T01:CDS | 25.0% |
!!! | TTCCTACTTTTAGATATGAA+AGG | + | Chr4:4774962-4774981 | MsG0480018429.01.T01:CDS | 25.0% |
AAATAATTCCAGAGTTCTGT+AGG | - | Chr4:4773335-4773354 | None:intergenic | 30.0% | |
AATGTCATTAGTGTCTACAA+AGG | + | Chr4:4772784-4772803 | MsG0480018429.01.T01:CDS | 30.0% | |
AGAAGATGATCAAATTCTGT+TGG | + | Chr4:4772555-4772574 | MsG0480018429.01.T01:CDS | 30.0% | |
AGAATTTATCAACCCAAGTT+TGG | + | Chr4:4774807-4774826 | MsG0480018429.01.T01:CDS | 30.0% | |
AGCACAACAAGAGATATATA+TGG | - | Chr4:4774178-4774197 | None:intergenic | 30.0% | |
ATCACCATGAAACCATTAAT+AGG | - | Chr4:4772295-4772314 | None:intergenic | 30.0% | |
ATGGACAATGTGTATGATAA+TGG | + | Chr4:4772340-4772359 | MsG0480018429.01.T01:CDS | 30.0% | |
ATGTCATTAGTGTCTACAAA+GGG | + | Chr4:4772785-4772804 | MsG0480018429.01.T01:CDS | 30.0% | |
ATTAATGGTTTCATGGTGAT+GGG | + | Chr4:4772295-4772314 | MsG0480018429.01.T01:CDS | 30.0% | |
ATTTGATAGGAAATCTCATG+TGG | + | Chr4:4771979-4771998 | MsG0480018429.01.T01:CDS | 30.0% | |
ATTTGATCATCTTCTGACAT+AGG | - | Chr4:4772550-4772569 | None:intergenic | 30.0% | |
CAAAGAAAACAAAGAGCTAT+AGG | - | Chr4:4771905-4771924 | None:intergenic | 30.0% | |
CTAAAAGACACCAATTTCAT+CGG | - | Chr4:4772229-4772248 | None:intergenic | 30.0% | |
CTATCATCAAATGGCATAAT+GGG | - | Chr4:4772160-4772179 | None:intergenic | 30.0% | |
GATGAAGTAAAGAAACAATG+TGG | + | Chr4:4772022-4772041 | MsG0480018429.01.T01:CDS | 30.0% | |
GGTCTATATTCAACAAAGAT+TGG | + | Chr4:4774891-4774910 | MsG0480018429.01.T01:CDS | 30.0% | |
GTTGGAAAGATGTATCTTAT+TGG | + | Chr4:4773806-4773825 | MsG0480018429.01.T01:CDS | 30.0% | |
TAGCAACGATTTCTTAATGA+CGG | - | Chr4:4773444-4773463 | None:intergenic | 30.0% | |
TATCTCTAGTAACTTCTTCA+AGG | - | Chr4:4772828-4772847 | None:intergenic | 30.0% | |
TATTAATGGTTTCATGGTGA+TGG | + | Chr4:4772294-4772313 | MsG0480018429.01.T01:CDS | 30.0% | |
TCAAATCTATACATTTCCTC+AGG | - | Chr4:4771965-4771984 | None:intergenic | 30.0% | |
TCACAGTGTAATCAATGATA+TGG | - | Chr4:4774324-4774343 | None:intergenic | 30.0% | |
TCACCATGAAACCATTAATA+GGG | - | Chr4:4772294-4772313 | None:intergenic | 30.0% | |
TCGAGTAAAAATCCAAACTT+GGG | - | Chr4:4774822-4774841 | None:intergenic | 30.0% | |
TGGACAATGTGTATGATAAT+GGG | + | Chr4:4772341-4772360 | MsG0480018429.01.T01:CDS | 30.0% | |
TGTATATGATTGGAAAAGTC+TGG | - | Chr4:4774027-4774046 | None:intergenic | 30.0% | |
TTCGAGTAAAAATCCAAACT+TGG | - | Chr4:4774823-4774842 | None:intergenic | 30.0% | |
TTTGATAGGAAATCTCATGT+GGG | + | Chr4:4771980-4771999 | MsG0480018429.01.T01:CDS | 30.0% | |
! | AATGTCTCATCTTCAAGTTT+AGG | - | Chr4:4773473-4773492 | None:intergenic | 30.0% |
! | ATGTCTCATCTTCAAGTTTA+GGG | - | Chr4:4773472-4773491 | None:intergenic | 30.0% |
! | GTGAGCTTTCTTTTGTTAAT+GGG | + | Chr4:4772107-4772126 | MsG0480018429.01.T01:CDS | 30.0% |
! | TATATATCTCTTGTTGTGCT+AGG | + | Chr4:4774178-4774197 | MsG0480018429.01.T01:CDS | 30.0% |
! | TCTGATTTGAGGTTTGATTA+TGG | + | Chr4:4772064-4772083 | MsG0480018429.01.T01:CDS | 30.0% |
! | TGAGCTTTCTTTTGTTAATG+GGG | + | Chr4:4772108-4772127 | MsG0480018429.01.T01:CDS | 30.0% |
! | TGATAGGAATGATAATTTGC+CGG | + | Chr4:4772174-4772193 | MsG0480018429.01.T01:CDS | 30.0% |
! | TTTCTTTTGTTAATGGGGAT+TGG | + | Chr4:4772113-4772132 | MsG0480018429.01.T01:CDS | 30.0% |
!! | GATGAAATTGGTGTCTTTTA+GGG | + | Chr4:4772228-4772247 | MsG0480018429.01.T01:CDS | 30.0% |
!!! | ATGTTGTTTTATGGAGAAAG+TGG | - | Chr4:4773235-4773254 | None:intergenic | 30.0% |
!!! | GAAGTACTTTTTTATCAGTG+GGG | - | Chr4:4774453-4774472 | None:intergenic | 30.0% |
!!! | TAGATTAGGTCCTTTTTTGT+CGG | + | Chr4:4772903-4772922 | MsG0480018429.01.T01:CDS | 30.0% |
AAGAAGTCGATCCCTATTAA+TGG | + | Chr4:4772280-4772299 | MsG0480018429.01.T01:CDS | 35.0% | |
AAGGAATTGGAAGAATATGC+AGG | + | Chr4:4774610-4774629 | MsG0480018429.01.T01:CDS | 35.0% | |
AAGGGAGTAACTGTAATACT+CGG | + | Chr4:4773190-4773209 | MsG0480018429.01.T01:intron | 35.0% | |
ACAAGCTGTTCAAATGATAG+AGG | - | Chr4:4773308-4773327 | None:intergenic | 35.0% | |
AGATACATCTTTCCAACATG+TGG | - | Chr4:4773803-4773822 | None:intergenic | 35.0% | |
AGTATTACAGTTACTCCCTT+TGG | - | Chr4:4773190-4773209 | None:intergenic | 35.0% | |
ATATGATTACATTCGAGCTC+CGG | + | Chr4:4774756-4774775 | MsG0480018429.01.T01:CDS | 35.0% | |
ATGACGGTTGAAAAAGTGAA+CGG | - | Chr4:4773428-4773447 | None:intergenic | 35.0% | |
ATTCTCTCATCCGACAAAAA+AGG | - | Chr4:4772916-4772935 | None:intergenic | 35.0% | |
CAAGAATAATTGCAGTCACA+GGG | - | Chr4:4774864-4774883 | None:intergenic | 35.0% | |
CAGTTTGGTACAACAGATAA+AGG | - | Chr4:4772853-4772872 | None:intergenic | 35.0% | |
CCAATGTAAGTGTTAAGATC+CGG | - | Chr4:4774099-4774118 | None:intergenic | 35.0% | |
CCTATCATCAAATGGCATAA+TGG | - | Chr4:4772161-4772180 | None:intergenic | 35.0% | |
CGTTATTGGTATGCTCAAAA+TGG | + | Chr4:4773626-4773645 | MsG0480018429.01.T01:CDS | 35.0% | |
CTTTATCTGTTGTACCAAAC+TGG | + | Chr4:4772851-4772870 | MsG0480018429.01.T01:CDS | 35.0% | |
GATCCCTATTAATGGTTTCA+TGG | + | Chr4:4772288-4772307 | MsG0480018429.01.T01:CDS | 35.0% | |
GATGATTTCTGCAGTAGATT+AGG | + | Chr4:4772889-4772908 | MsG0480018429.01.T01:CDS | 35.0% | |
TACACTGAATCGAAGAGAAA+CGG | + | Chr4:4772424-4772443 | MsG0480018429.01.T01:CDS | 35.0% | |
TCAAGGATTTCACAAAACCT+TGG | - | Chr4:4772811-4772830 | None:intergenic | 35.0% | |
TCATTGGAATCACTGTAGTA+AGG | + | Chr4:4774719-4774738 | MsG0480018429.01.T01:CDS | 35.0% | |
TCCATCTGAATATCAACTCT+CGG | - | Chr4:4773578-4773597 | None:intergenic | 35.0% | |
TCTATAGAAATTGTGGCAGT+GGG | - | Chr4:4773956-4773975 | None:intergenic | 35.0% | |
TGGAACTAGTTCAGTTTCAA+AGG | - | Chr4:4775001-4775020 | None:intergenic | 35.0% | |
TTAACACTTACATTGGCAGT+TGG | + | Chr4:4774103-4774122 | MsG0480018429.01.T01:CDS | 35.0% | |
TTCTATAGAAATTGTGGCAG+TGG | - | Chr4:4773957-4773976 | None:intergenic | 35.0% | |
TTGACGAATAGGATGATAAC+TGG | + | Chr4:4772604-4772623 | MsG0480018429.01.T01:CDS | 35.0% | |
! | AAGTGAGATCTTCTGAAAGA+AGG | - | Chr4:4773511-4773530 | None:intergenic | 35.0% |
! | AGTGAGATCTTCTGAAAGAA+GGG | - | Chr4:4773510-4773529 | None:intergenic | 35.0% |
! | ATAGGAATGATAATTTGCCG+GGG | + | Chr4:4772176-4772195 | MsG0480018429.01.T01:CDS | 35.0% |
! | CCATTATGCCATTTGATGAT+AGG | + | Chr4:4772158-4772177 | MsG0480018429.01.T01:CDS | 35.0% |
! | CGTTGCTTTCTGTATATGAT+TGG | - | Chr4:4774037-4774056 | None:intergenic | 35.0% |
! | GAAAAGTATGGATTTGGAAC+CGG | - | Chr4:4774778-4774797 | None:intergenic | 35.0% |
! | GATAGGAATGATAATTTGCC+GGG | + | Chr4:4772175-4772194 | MsG0480018429.01.T01:CDS | 35.0% |
! | GATTTGAGGTTTGATTATGG+TGG | + | Chr4:4772067-4772086 | MsG0480018429.01.T01:CDS | 35.0% |
! | GGAATCTTGATTTTCGGTTA+TGG | + | Chr4:4772362-4772381 | MsG0480018429.01.T01:CDS | 35.0% |
! | GGTGAGCTTTCTTTTGTTAA+TGG | + | Chr4:4772106-4772125 | MsG0480018429.01.T01:CDS | 35.0% |
! | TCCAAATCCATACTTTTCTG+AGG | + | Chr4:4774780-4774799 | MsG0480018429.01.T01:CDS | 35.0% |
! | TCCTCAGAAAAGTATGGATT+TGG | - | Chr4:4774784-4774803 | None:intergenic | 35.0% |
! | TGTTTTATGGAGAAAGTGGT+AGG | - | Chr4:4773231-4773250 | None:intergenic | 35.0% |
! | TTCTTGTTTCCCCAAATCAT+TGG | + | Chr4:4774649-4774668 | MsG0480018429.01.T01:CDS | 35.0% |
! | TTTGAAACTGAACTAGTTCC+AGG | + | Chr4:4775000-4775019 | MsG0480018429.01.T01:CDS | 35.0% |
!! | AATGGACTGTTTAATTGAGG+TGG | + | Chr4:4773889-4773908 | MsG0480018429.01.T01:CDS | 35.0% |
!! | AGAAGCTCTTTTCAAGAGAA+TGG | + | Chr4:4774243-4774262 | MsG0480018429.01.T01:CDS | 35.0% |
!! | CGATGAAATTGGTGTCTTTT+AGG | + | Chr4:4772227-4772246 | MsG0480018429.01.T01:CDS | 35.0% |
!! | TAGTAATACTGGTTCCACTA+AGG | + | Chr4:4773011-4773030 | MsG0480018429.01.T01:CDS | 35.0% |
!! | TGGAATGGACTGTTTAATTG+AGG | + | Chr4:4773886-4773905 | MsG0480018429.01.T01:CDS | 35.0% |
!! | TTTGATTATGGTGGTGTTGT+TGG | + | Chr4:4772076-4772095 | MsG0480018429.01.T01:CDS | 35.0% |
!!! | ATTCTTCTGACTGGTTTTTG+TGG | - | Chr4:4774530-4774549 | None:intergenic | 35.0% |
AAATCCATTGCAAACCACTC+AGG | + | Chr4:4774686-4774705 | MsG0480018429.01.T01:CDS | 40.0% | |
AATAATTGCAGTCACAGGGA+TGG | - | Chr4:4774860-4774879 | None:intergenic | 40.0% | |
ACCAATGATATGTAAGGCGA+AGG | - | Chr4:4774482-4774501 | None:intergenic | 40.0% | |
ACCTTCGCCTTACATATCAT+TGG | + | Chr4:4774478-4774497 | MsG0480018429.01.T01:CDS | 40.0% | |
AGAAGATTTCCAGATCCCTT+CGG | - | Chr4:4773124-4773143 | None:intergenic | 40.0% | |
AGAATCAAATCGACACATGG+AGG | + | Chr4:4772931-4772950 | MsG0480018429.01.T01:CDS | 40.0% | |
AGAGAATTCTCATTCGTTGC+CGG | + | Chr4:4774579-4774598 | MsG0480018429.01.T01:CDS | 40.0% | |
AGCTTTCGATTCCCTTTCAA+GGG | + | Chr4:4772398-4772417 | MsG0480018429.01.T01:CDS | 40.0% | |
ATACCAATAACGCCCAAACA+TGG | - | Chr4:4773618-4773637 | None:intergenic | 40.0% | |
ATGAAATACAGCTTCCTGAG+TGG | - | Chr4:4774703-4774722 | None:intergenic | 40.0% | |
CAGATGTTGATCATGCTCAT+AGG | + | Chr4:4772254-4772273 | MsG0480018429.01.T01:CDS | 40.0% | |
CATATACAGAAAGCAACGTG+AGG | + | Chr4:4774039-4774058 | MsG0480018429.01.T01:CDS | 40.0% | |
CATCTGAATATCAACTCTCG+GGG | - | Chr4:4773576-4773595 | None:intergenic | 40.0% | |
CCATCTGAATATCAACTCTC+GGG | - | Chr4:4773577-4773596 | None:intergenic | 40.0% | |
CCGGATCTTAACACTTACAT+TGG | + | Chr4:4774096-4774115 | MsG0480018429.01.T01:CDS | 40.0% | |
CTATAGAAATTGTGGCAGTG+GGG | - | Chr4:4773955-4773974 | None:intergenic | 40.0% | |
CTATGATCTTGAGTCTGGAA+TGG | + | Chr4:4773871-4773890 | MsG0480018429.01.T01:CDS | 40.0% | |
CTCAGGAAGCTGTATTTCAT+TGG | + | Chr4:4774703-4774722 | MsG0480018429.01.T01:CDS | 40.0% | |
GAACTAGTTCCAGGTATCAA+TGG | + | Chr4:4775009-4775028 | MsG0480018429.01.T01:CDS | 40.0% | |
GAGAGAATCAAATCGACACA+TGG | + | Chr4:4772928-4772947 | MsG0480018429.01.T01:CDS | 40.0% | |
GCAAGAATAATTGCAGTCAC+AGG | - | Chr4:4774865-4774884 | None:intergenic | 40.0% | |
GGGGAAACAAGAAAAAGTCT+TGG | - | Chr4:4774642-4774661 | None:intergenic | 40.0% | |
GGTCTTTATGATCCACATGT+TGG | + | Chr4:4773788-4773807 | MsG0480018429.01.T01:CDS | 40.0% | |
GTTCACATATCATCGCAGTT+GGG | + | Chr4:4772676-4772695 | MsG0480018429.01.T01:CDS | 40.0% | |
TACAATGCAGCAAAGAGATC+CGG | + | Chr4:4773075-4773094 | MsG0480018429.01.T01:CDS | 40.0% | |
TACCAATAACGCCCAAACAT+GGG | - | Chr4:4773617-4773636 | None:intergenic | 40.0% | |
TCAGTGTAAACCCCTTGAAA+GGG | - | Chr4:4772412-4772431 | None:intergenic | 40.0% | |
TCTGACATAGGTACATCACT+GGG | - | Chr4:4772538-4772557 | None:intergenic | 40.0% | |
TCTGAGTCCTCAGAAAAGTA+TGG | - | Chr4:4774790-4774809 | None:intergenic | 40.0% | |
TCTGCAGCATTTGCATGATA+TGG | - | Chr4:4773677-4773696 | None:intergenic | 40.0% | |
TGACGACACATCATACGATT+CGG | - | Chr4:4774272-4774291 | None:intergenic | 40.0% | |
TGACGTTCACTTTGACGAAT+AGG | + | Chr4:4772593-4772612 | MsG0480018429.01.T01:CDS | 40.0% | |
TGCTCAAAATGGTTCAACTG+AGG | + | Chr4:4773637-4773656 | MsG0480018429.01.T01:CDS | 40.0% | |
TGTTAATGGGGATTGGATTC+AGG | + | Chr4:4772120-4772139 | MsG0480018429.01.T01:CDS | 40.0% | |
TTCAGTGTAAACCCCTTGAA+AGG | - | Chr4:4772413-4772432 | None:intergenic | 40.0% | |
TTCGTCAAAGTGAACGTCAA+TGG | - | Chr4:4772592-4772611 | None:intergenic | 40.0% | |
TTCTGACATAGGTACATCAC+TGG | - | Chr4:4772539-4772558 | None:intergenic | 40.0% | |
TTGGGAGTCAAATGTGAACT+TGG | - | Chr4:4772710-4772729 | None:intergenic | 40.0% | |
TTGTGTTACCTACAGAACTC+TGG | + | Chr4:4773324-4773343 | MsG0480018429.01.T01:CDS | 40.0% | |
! | GTGATGGGAATTACTAGAGA+TGG | + | Chr4:4772310-4772329 | MsG0480018429.01.T01:CDS | 40.0% |
! | TAGGAATGATAATTTGCCGG+GGG | + | Chr4:4772177-4772196 | MsG0480018429.01.T01:CDS | 40.0% |
! | TATCTGCTGCATCTGATTTG+AGG | + | Chr4:4772053-4772072 | MsG0480018429.01.T01:CDS | 40.0% |
! | TGAGTCAGGTTCTGACATTT+GGG | + | Chr4:4774926-4774945 | MsG0480018429.01.T01:CDS | 40.0% |
!! | GATCTCACTTTTCATGTCTC+AGG | + | Chr4:4773521-4773540 | MsG0480018429.01.T01:CDS | 40.0% |
!! | TGCTGCATTGTATCGATTCT+CGG | - | Chr4:4773067-4773086 | None:intergenic | 40.0% |
!! | TGTTCTGAGATTCTTCTGAC+TGG | - | Chr4:4774539-4774558 | None:intergenic | 40.0% |
!!! | TTTTCCGCACTTTTTCTCGA+GGG | + | Chr4:4773767-4773786 | MsG0480018429.01.T01:CDS | 40.0% |
!!! | TTTTTCCGCACTTTTTCTCG+AGG | + | Chr4:4773766-4773785 | MsG0480018429.01.T01:CDS | 40.0% |
AAACCAATCCTGCGAATCCA+TGG | + | Chr4:4772497-4772516 | MsG0480018429.01.T01:CDS | 45.0% | |
AACCAATCCTGCGAATCCAT+GGG | + | Chr4:4772498-4772517 | MsG0480018429.01.T01:CDS | 45.0% | |
AAGACCCTCGAGAAAAAGTG+CGG | - | Chr4:4773774-4773793 | None:intergenic | 45.0% | |
AAGCGACATGTTGTTGACAC+CGG | - | Chr4:4773097-4773116 | None:intergenic | 45.0% | |
AATTTCATCGGACTACCACG+CGG | - | Chr4:4772217-4772236 | None:intergenic | 45.0% | |
ACTGAATCGAAGAGAAACGG+TGG | + | Chr4:4772427-4772446 | MsG0480018429.01.T01:CDS | 45.0% | |
AGCTAGTTCACAGTTTCCTG+AGG | + | Chr4:4771946-4771965 | MsG0480018429.01.T01:CDS | 45.0% | |
AGTCTTAGCGGGAAAGGTTA+TGG | + | Chr4:4773740-4773759 | MsG0480018429.01.T01:CDS | 45.0% | |
ATCGAAAGCTGAGAATGTCC+AGG | - | Chr4:4772388-4772407 | None:intergenic | 45.0% | |
ATTCTCATTCGTTGCCGGAT+TGG | + | Chr4:4774584-4774603 | MsG0480018429.01.T01:CDS | 45.0% | |
CAGAGCTATGATCTTGAGTC+TGG | + | Chr4:4773866-4773885 | MsG0480018429.01.T01:CDS | 45.0% | |
CAGCTTTCGATTCCCTTTCA+AGG | + | Chr4:4772397-4772416 | MsG0480018429.01.T01:CDS | 45.0% | |
CGGATATGGATCACATGCTT+TGG | - | Chr4:4772743-4772762 | None:intergenic | 45.0% | |
CTAGTTCCAGGTATCAATGG+TGG | + | Chr4:4775012-4775031 | MsG0480018429.01.T01:CDS | 45.0% | |
CTGAATCGAAGAGAAACGGT+GGG | + | Chr4:4772428-4772447 | MsG0480018429.01.T01:CDS | 45.0% | |
GAGGATGTCCTTTCACAAAG+AGG | + | Chr4:4774058-4774077 | MsG0480018429.01.T01:CDS | 45.0% | |
GCAGCTGGTCATAGTAATAC+TGG | + | Chr4:4773000-4773019 | MsG0480018429.01.T01:CDS | 45.0% | |
GCTTTCGATTCCCTTTCAAG+GGG | + | Chr4:4772399-4772418 | MsG0480018429.01.T01:CDS | 45.0% | |
GGGATCTGGAAATCTTCTAG+TGG | + | Chr4:4773126-4773145 | MsG0480018429.01.T01:CDS | 45.0% | |
GGTTCACATATCATCGCAGT+TGG | + | Chr4:4772675-4772694 | MsG0480018429.01.T01:CDS | 45.0% | |
GTACCAAACTGGAGATGCAA+TGG | + | Chr4:4772862-4772881 | MsG0480018429.01.T01:CDS | 45.0% | |
GTACCATTGCATCTCCAGTT+TGG | - | Chr4:4772868-4772887 | None:intergenic | 45.0% | |
GTGCTAGGTGTTCAATCTCT+TGG | + | Chr4:4774193-4774212 | MsG0480018429.01.T01:CDS | 45.0% | |
TAATGGGGATTGGATTCAGG+AGG | + | Chr4:4772123-4772142 | MsG0480018429.01.T01:CDS | 45.0% | |
TCGTATGATGTGTCGTCATC+TGG | + | Chr4:4774274-4774293 | MsG0480018429.01.T01:CDS | 45.0% | |
TCTGCACAACTGAGTCTTAG+CGG | + | Chr4:4773728-4773747 | MsG0480018429.01.T01:CDS | 45.0% | |
TGAATCGAAGAGAAACGGTG+GGG | + | Chr4:4772429-4772448 | MsG0480018429.01.T01:CDS | 45.0% | |
TGTGTCGTCATCTGGTACTT+TGG | + | Chr4:4774282-4774301 | MsG0480018429.01.T01:CDS | 45.0% | |
TTAGTGTCTACAAAGGGCCA+AGG | + | Chr4:4772791-4772810 | MsG0480018429.01.T01:CDS | 45.0% | |
TTATCAGTGGGGACACAATG+CGG | - | Chr4:4774442-4774461 | None:intergenic | 45.0% | |
TTCTCATTCGTTGCCGGATT+GGG | + | Chr4:4774585-4774604 | MsG0480018429.01.T01:CDS | 45.0% | |
TTGGACTTGTCGATGCCAAA+GGG | + | Chr4:4773172-4773191 | MsG0480018429.01.T01:intron | 45.0% | |
! | ACACTTTCTGAAAAAGCCGC+AGG | - | Chr4:4774378-4774397 | None:intergenic | 45.0% |
! | AGGAATGATAATTTGCCGGG+GGG | + | Chr4:4772178-4772197 | MsG0480018429.01.T01:CDS | 45.0% |
! | CACTTTCTGAAAAAGCCGCA+GGG | - | Chr4:4774377-4774396 | None:intergenic | 45.0% |
! | CTGAGTCAGGTTCTGACATT+TGG | + | Chr4:4774925-4774944 | MsG0480018429.01.T01:CDS | 45.0% |
! | CTTGATTTTCGGTTATGGCC+TGG | + | Chr4:4772367-4772386 | MsG0480018429.01.T01:CDS | 45.0% |
! | GGATTTTTCATCCACTCCCA+TGG | - | Chr4:4772517-4772536 | None:intergenic | 45.0% |
! | GTACTTTGGAGAACAGTGAG+TGG | + | Chr4:4774296-4774315 | MsG0480018429.01.T01:CDS | 45.0% |
! | TTCAGAAAGTGTGGAAGTCG+CGG | + | Chr4:4774386-4774405 | MsG0480018429.01.T01:CDS | 45.0% |
! | TTCTAGTGGACAGCTTTGCA+TGG | + | Chr4:4773140-4773159 | MsG0480018429.01.T01:CDS | 45.0% |
!! | AGAGGGTGTTGTGTTTGCTA+GGG | + | Chr4:4772452-4772471 | MsG0480018429.01.T01:CDS | 45.0% |
!! | CCCGAGAGTTGATATTCAGA+TGG | + | Chr4:4773574-4773593 | MsG0480018429.01.T01:CDS | 45.0% |
!! | GAACCGAAGAGTATCATCGT+CGG | - | Chr4:4773990-4774009 | None:intergenic | 45.0% |
!! | GCATTGTATCGATTCTCGGA+TGG | - | Chr4:4773063-4773082 | None:intergenic | 45.0% |
!! | GGTGGTGTTGTTGGTATGAA+AGG | + | Chr4:4772085-4772104 | MsG0480018429.01.T01:CDS | 45.0% |
!! | TGAACGGCTCGTTTTTCTCA+AGG | - | Chr4:4773412-4773431 | None:intergenic | 45.0% |
!! | TTTCACAAAGAGGCGTCGAA+GGG | + | Chr4:4774068-4774087 | MsG0480018429.01.T01:CDS | 45.0% |
!!! | TGCGGCTTTTTCAGAAAGTG+TGG | + | Chr4:4774377-4774396 | MsG0480018429.01.T01:CDS | 45.0% |
AAACACCGCAGACACCTTAG+TGG | - | Chr4:4773028-4773047 | None:intergenic | 50.0% | |
AGTGGACAGCTTTGCATGGT+TGG | + | Chr4:4773144-4773163 | MsG0480018429.01.T01:intron | 50.0% | |
CAACTGAGTCTTAGCGGGAA+AGG | + | Chr4:4773734-4773753 | MsG0480018429.01.T01:CDS | 50.0% | |
CAGATGGAGATACTCTCCGT+TGG | + | Chr4:4773590-4773609 | MsG0480018429.01.T01:CDS | 50.0% | |
CTGCACAACTGAGTCTTAGC+GGG | + | Chr4:4773729-4773748 | MsG0480018429.01.T01:CDS | 50.0% | |
CTTCGACGCCTCTTTGTGAA+AGG | - | Chr4:4774069-4774088 | None:intergenic | 50.0% | |
CTTGGACTTGTCGATGCCAA+AGG | + | Chr4:4773171-4773190 | MsG0480018429.01.T01:intron | 50.0% | |
GACCCATGTTTGGGCGTTAT+TGG | + | Chr4:4773612-4773631 | MsG0480018429.01.T01:CDS | 50.0% | |
GCGTGGTAGTCCGATGAAAT+TGG | + | Chr4:4772216-4772235 | MsG0480018429.01.T01:CDS | 50.0% | |
GCTTCTGCATCTGTGACTAG+AGG | - | Chr4:4774229-4774248 | None:intergenic | 50.0% | |
GGACCGACGATGATACTCTT+CGG | + | Chr4:4773984-4774003 | MsG0480018429.01.T01:CDS | 50.0% | |
GTTATCTGTGAGCAAGCAGC+TGG | + | Chr4:4772985-4773004 | MsG0480018429.01.T01:CDS | 50.0% | |
GTTCCAGGTATCAATGGTGG+TGG | + | Chr4:4775015-4775034 | MsG0480018429.01.T01:CDS | 50.0% | |
TATCGTTGCTGCTAACCCTG+CGG | + | Chr4:4774359-4774378 | MsG0480018429.01.T01:CDS | 50.0% | |
TCACCACCACCATTGATACC+TGG | - | Chr4:4775021-4775040 | None:intergenic | 50.0% | |
TCCAATTCCTTCGCCCAATC+CGG | - | Chr4:4774601-4774620 | None:intergenic | 50.0% | |
TCTCCGTTGGACCCATGTTT+GGG | + | Chr4:4773603-4773622 | MsG0480018429.01.T01:CDS | 50.0% | |
! | AACATGTCGCTTGCTACCGA+AGG | + | Chr4:4773105-4773124 | MsG0480018429.01.T01:CDS | 50.0% |
! | ACATGTCGCTTGCTACCGAA+GGG | + | Chr4:4773106-4773125 | MsG0480018429.01.T01:CDS | 50.0% |
! | CTTTGCATGGTTGGTTGCCT+TGG | + | Chr4:4773153-4773172 | MsG0480018429.01.T01:intron | 50.0% |
! | GCTTCCTGAGTGGTTTGCAA+TGG | - | Chr4:4774693-4774712 | None:intergenic | 50.0% |
! | TGGTTCCACTAAGGTGTCTG+CGG | + | Chr4:4773020-4773039 | MsG0480018429.01.T01:CDS | 50.0% |
!! | CTTTCACAAAGAGGCGTCGA+AGG | + | Chr4:4774067-4774086 | MsG0480018429.01.T01:CDS | 50.0% |
!! | CTTTGGCATCGACAAGTCCA+AGG | - | Chr4:4773173-4773192 | None:intergenic | 50.0% |
!! | GAGAGGGTGTTGTGTTTGCT+AGG | + | Chr4:4772451-4772470 | MsG0480018429.01.T01:CDS | 50.0% |
!! | GCAGGATTGGTTTCTCGAGT+TGG | - | Chr4:4772490-4772509 | None:intergenic | 50.0% |
AATTTGCCGGGGGGTTTGTC+AGG | + | Chr4:4772187-4772206 | MsG0480018429.01.T01:CDS | 55.0% | |
ACGCCCAAACATGGGTCCAA+CGG | - | Chr4:4773609-4773628 | None:intergenic | 55.0% | |
ACTAGCCACCGAGTTGTCGT+CGG | - | Chr4:4773929-4773948 | None:intergenic | 55.0% | |
ATCCACTCCCATGGATTCGC+AGG | - | Chr4:4772508-4772527 | None:intergenic | 55.0% | |
ATCCTGCGAATCCATGGGAG+TGG | + | Chr4:4772503-4772522 | MsG0480018429.01.T01:CDS | 55.0% | |
CCTATCCTCCGACGACAACT+CGG | + | Chr4:4773918-4773937 | MsG0480018429.01.T01:CDS | 55.0% | |
CTCCCATGGATTCGCAGGAT+TGG | - | Chr4:4772503-4772522 | None:intergenic | 55.0% | |
CTCTCCGTTGGACCCATGTT+TGG | + | Chr4:4773602-4773621 | MsG0480018429.01.T01:CDS | 55.0% | |
CTGCACACGAGGCATAGGAT+CGG | - | Chr4:4773552-4773571 | None:intergenic | 55.0% | |
GAAGAGAAACGGTGGGGAGA+GGG | + | Chr4:4772435-4772454 | MsG0480018429.01.T01:CDS | 55.0% | |
GACACAATGCGGCTCAGAAG+AGG | - | Chr4:4774431-4774450 | None:intergenic | 55.0% | |
GGGCTATGACAAGCTGAGTC+AGG | + | Chr4:4774912-4774931 | MsG0480018429.01.T01:CDS | 55.0% | |
GGGGATTGGATTCAGGAGGA+TGG | + | Chr4:4772127-4772146 | MsG0480018429.01.T01:CDS | 55.0% | |
GGTGTCTGCGGTGTTTAGAG+CGG | + | Chr4:4773032-4773051 | MsG0480018429.01.T01:CDS | 55.0% | |
TGCACACGAGGCATAGGATC+GGG | - | Chr4:4773551-4773570 | None:intergenic | 55.0% | |
ATCCTCCGACGACAACTCGG+TGG | + | Chr4:4773921-4773940 | MsG0480018429.01.T01:CDS | 60.0% | |
CCGAGTTGTCGTCGGAGGAT+AGG | - | Chr4:4773921-4773940 | None:intergenic | 60.0% | |
CGAAGAGAAACGGTGGGGAG+AGG | + | Chr4:4772434-4772453 | MsG0480018429.01.T01:CDS | 60.0% | |
CGATCCTATGCCTCGTGTGC+AGG | + | Chr4:4773550-4773569 | MsG0480018429.01.T01:CDS | 60.0% | |
GGATCTCCTGACAAACCCCC+CGG | - | Chr4:4772196-4772215 | None:intergenic | 60.0% | |
GGTTTGTCAGGAGATCCGCG+TGG | + | Chr4:4772199-4772218 | MsG0480018429.01.T01:CDS | 60.0% | |
! | CGCTTGCTACCGAAGGGATC+TGG | + | Chr4:4773112-4773131 | MsG0480018429.01.T01:CDS | 60.0% |
! | GCCGGATTGGGCGAAGGAAT+TGG | + | Chr4:4774597-4774616 | MsG0480018429.01.T01:CDS | 60.0% |
! | TTCGTTGCCGGATTGGGCGA+AGG | + | Chr4:4774591-4774610 | MsG0480018429.01.T01:CDS | 60.0% |
!! | GAGGCGTCGAAGGGATTCTC+CGG | + | Chr4:4774077-4774096 | MsG0480018429.01.T01:CDS | 60.0% |
AGCCACCGAGTTGTCGTCGG+AGG | - | Chr4:4773926-4773945 | None:intergenic | 65.0% | |
! | GCAGAGACGTGCGAGCATCG+TGG | + | Chr4:4773831-4773850 | MsG0480018429.01.T01:CDS | 65.0% |
ACTCTCGGGGCCTGCACACG+AGG | - | Chr4:4773563-4773582 | None:intergenic | 70.0% | |
GGGGCCTGCACACGAGGCAT+AGG | - | Chr4:4773557-4773576 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 4771884 | 4775071 | 4771884 | ID=MsG0480018429.01;Name=MsG0480018429.01 |
Chr4 | mRNA | 4771884 | 4775071 | 4771884 | ID=MsG0480018429.01.T01;Parent=MsG0480018429.01;Name=MsG0480018429.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|2|0|1008 |
Chr4 | exon | 4771884 | 4773161 | 4771884 | ID=MsG0480018429.01.T01:exon:1730;Parent=MsG0480018429.01.T01 |
Chr4 | exon | 4773323 | 4775071 | 4773323 | ID=MsG0480018429.01.T01:exon:1731;Parent=MsG0480018429.01.T01 |
Chr4 | CDS | 4771884 | 4773161 | 4771884 | ID=MsG0480018429.01.T01:cds;Parent=MsG0480018429.01.T01 |
Chr4 | CDS | 4773323 | 4775071 | 4773323 | ID=MsG0480018429.01.T01:cds;Parent=MsG0480018429.01.T01 |
Gene Sequence |
Protein sequence |