AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019055.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019055.01.T01 MTR_4g023030 76.071 280 22 3 1 235 117 396 1.14e-128 377
MsG0480019055.01.T01 MTR_3g026650 55.000 260 68 7 19 235 83 336 3.79e-78 241
MsG0480019055.01.T01 MTR_3g026650 55.000 260 68 7 19 235 83 336 5.26e-77 240
MsG0480019055.01.T01 MTR_3g026650 55.000 260 68 7 19 235 83 336 2.87e-76 241
MsG0480019055.01.T01 MTR_4g125460 38.125 160 77 5 93 235 100 254 6.87e-28 110
MsG0480019055.01.T01 MTR_4g125460 38.125 160 77 5 93 235 239 393 1.54e-27 110
MsG0480019055.01.T01 MTR_4g100810 40.506 158 65 4 93 229 119 268 7.66e-26 105
MsG0480019055.01.T01 MTR_5g064620 36.478 159 83 4 93 235 122 278 3.09e-25 103
MsG0480019055.01.T01 MTR_5g012770 42.466 146 68 4 93 229 135 273 1.10e-24 102
MsG0480019055.01.T01 MTR_5g099010 40.000 150 79 3 93 231 130 279 4.34e-23 97.8
MsG0480019055.01.T01 MTR_3g115220 32.927 164 82 4 93 236 122 277 1.66e-22 95.9
MsG0480019055.01.T01 MTR_3g099480 35.625 160 80 5 93 235 151 304 3.94e-22 94.7
MsG0480019055.01.T01 MTR_2g059350 37.037 162 83 5 93 237 126 285 4.89e-22 94.4
MsG0480019055.01.T01 MTR_4g110030 36.970 165 79 6 93 237 127 286 8.42e-22 94.0
MsG0480019055.01.T01 MTR_3g096020 35.669 157 77 6 93 232 200 349 1.99e-21 92.8
MsG0480019055.01.T01 MTR_4g082310 35.625 160 83 6 93 235 108 264 3.48e-21 92.0
MsG0480019055.01.T01 MTR_5g081690 35.000 160 82 5 93 235 132 286 4.03e-21 92.0
MsG0480019055.01.T01 MTR_5g042200 35.000 160 84 5 93 235 96 252 8.56e-21 90.9
MsG0480019055.01.T01 MTR_6g016015 35.802 162 85 5 93 237 126 285 8.97e-21 90.9
MsG0480019055.01.T01 MTR_3g100310 36.076 158 80 5 93 229 111 268 1.03e-20 90.9
MsG0480019055.01.T01 MTR_4g084570 34.615 156 84 4 93 231 161 315 1.32e-20 90.5
MsG0480019055.01.T01 MTR_5g032100 35.583 163 76 6 93 230 97 255 1.52e-20 90.1
MsG0480019055.01.T01 MTR_4g019210 34.228 149 87 3 93 230 243 391 8.00e-20 88.2
MsG0480019055.01.T01 MTR_3g086570 29.570 186 106 5 72 235 143 325 2.17e-19 86.7
MsG0480019055.01.T01 MTR_3g086570 29.570 186 106 5 72 235 143 325 3.24e-19 86.3
MsG0480019055.01.T01 MTR_1g102030 32.075 159 92 4 93 235 99 257 1.65e-18 84.3
MsG0480019055.01.T01 MTR_1g031590 34.810 158 81 5 93 231 160 314 1.06e-17 82.0
MsG0480019055.01.T01 MTR_3g005340 34.146 164 87 4 93 235 158 321 5.99e-17 79.7
MsG0480019055.01.T01 MTR_5g059260 31.013 158 87 3 93 231 168 322 5.45e-14 71.2
MsG0480019055.01.T01 MTR_2g016470 30.864 162 80 5 93 229 200 354 7.34e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019055.01.T01 AT2G44500 49.796 245 102 6 7 235 102 341 1.14e-65 209
MsG0480019055.01.T01 AT2G44500 49.796 245 102 6 7 235 102 341 6.23e-64 209
MsG0480019055.01.T01 AT5G63390 58.442 154 53 3 93 235 175 328 3.81e-53 180
MsG0480019055.01.T01 AT3G07900 63.636 154 45 3 93 235 199 352 2.07e-49 170
MsG0480019055.01.T01 AT5G35570 38.509 161 75 6 93 235 262 416 5.19e-25 103
MsG0480019055.01.T01 AT5G01100 36.250 160 80 5 93 235 227 381 3.49e-24 100
MsG0480019055.01.T01 AT1G20550 36.774 155 87 3 93 236 120 274 5.47e-23 97.4
MsG0480019055.01.T01 AT4G38390 37.888 161 79 4 93 236 134 290 1.14e-22 96.7
MsG0480019055.01.T01 AT3G02250 34.146 164 85 5 93 237 117 276 4.17e-22 94.7
MsG0480019055.01.T01 AT5G65470 34.969 163 77 6 93 230 96 254 4.99e-22 94.4
MsG0480019055.01.T01 AT1G76270 35.583 163 78 4 93 236 117 271 6.03e-22 94.4
MsG0480019055.01.T01 AT5G15740 34.568 162 87 5 93 237 117 276 7.43e-22 94.0
MsG0480019055.01.T01 AT1G22460 36.943 157 82 5 93 235 171 324 2.59e-21 92.4
MsG0480019055.01.T01 AT3G54100 34.839 155 89 4 93 235 233 387 3.19e-21 92.4
MsG0480019055.01.T01 AT2G37980 34.228 149 87 3 93 230 237 385 3.38e-21 92.4
MsG0480019055.01.T01 AT5G64600 37.888 161 75 7 93 235 128 281 1.84e-20 90.1
MsG0480019055.01.T01 AT4G24530 32.927 164 79 6 93 230 112 270 7.62e-20 88.2
MsG0480019055.01.T01 AT1G14970 35.065 154 82 4 93 229 20 172 2.88e-19 86.3
MsG0480019055.01.T01 AT2G01480 33.974 156 85 4 93 231 165 319 2.92e-19 86.7
MsG0480019055.01.T01 AT1G14970 35.065 154 82 4 93 229 46 198 3.20e-19 86.3
MsG0480019055.01.T01 AT2G03280 33.750 160 86 5 93 235 99 255 4.65e-19 85.9
MsG0480019055.01.T01 AT2G01480 33.974 156 85 4 93 231 165 319 5.01e-19 85.9
MsG0480019055.01.T01 AT4G16650 38.816 152 76 3 93 229 133 282 6.55e-19 85.5
MsG0480019055.01.T01 AT4G16650 38.816 152 76 3 93 229 133 282 6.55e-19 85.5
MsG0480019055.01.T01 AT1G14020 34.783 161 83 6 93 235 102 258 7.37e-19 85.5
MsG0480019055.01.T01 AT1G14970 35.065 154 82 4 93 229 166 318 9.09e-19 85.1
MsG0480019055.01.T01 AT3G26370 27.957 186 109 5 72 235 151 333 2.96e-18 83.2
MsG0480019055.01.T01 AT3G26370 28.485 165 96 4 93 235 169 333 3.52e-18 83.6
MsG0480019055.01.T01 AT1G04910 32.075 159 92 5 93 235 99 257 5.23e-18 82.8
MsG0480019055.01.T01 AT3G30300 33.898 177 80 7 91 237 109 278 5.55e-17 80.1
MsG0480019055.01.T01 AT3G30300 33.898 177 80 7 91 237 109 278 5.55e-17 80.1
MsG0480019055.01.T01 AT1G11990 30.588 170 84 4 93 236 201 362 1.34e-16 79.0
MsG0480019055.01.T01 AT1G35510 34.194 155 86 4 93 231 170 324 1.94e-16 78.6
MsG0480019055.01.T01 AT1G62330 30.178 169 84 4 93 235 232 392 1.98e-16 78.6
MsG0480019055.01.T01 AT2G03280 29.412 187 85 6 93 235 99 282 2.48e-16 78.2
MsG0480019055.01.T01 AT1G11990 30.178 169 84 4 93 235 186 346 3.69e-16 77.8
MsG0480019055.01.T01 AT1G38065 30.573 157 89 5 93 231 47 201 9.77e-15 73.2
MsG0480019055.01.T01 AT1G38065 30.573 157 89 5 93 231 37 191 1.15e-14 73.2
MsG0480019055.01.T01 AT1G38131 30.573 157 89 5 93 231 166 320 1.15e-14 73.2

Find 133 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGTATGTATCCCTTTAA+TGG 0.150084 4:-13968784 None:intergenic
GCCATCTCATGGAGGAAATA+TGG 0.218103 4:+13967815 MsG0480019055.01.T01:three_prime_UTR
GTTGTTATTGCTAGGATTCT+TGG 0.223923 4:+13965904 MsG0480019055.01.T01:CDS
CCAGCCATCTTTCTTCTTCA+TGG 0.235463 4:-13967164 None:intergenic
GGGATGCATTTGTCTTTGTT+TGG 0.244474 4:-13968349 None:intergenic
GGATGCATTTGTCTTTGTTT+GGG 0.248577 4:-13968348 None:intergenic
TATAGGTTGCTTAAAGCTTT+AGG 0.261962 4:+13967589 MsG0480019055.01.T01:intron
CATACATATTAAGCATATTA+AGG 0.267084 4:-13968742 None:intergenic
GGAGTTGAAAAGAGTGAGTT+TGG 0.270388 4:+13965728 MsG0480019055.01.T01:CDS
GGTTTCCTGTGATCCATTAA+AGG 0.271188 4:+13968771 MsG0480019055.01.T01:three_prime_UTR
GAGGGAAGAATTCAGAAAAT+AGG 0.283536 4:-13968370 None:intergenic
AGATTCAATGCCAACGCTTT+TGG 0.292436 4:+13968544 MsG0480019055.01.T01:three_prime_UTR
TGCTTAATATGTATGCAATT+AGG 0.294359 4:+13968750 MsG0480019055.01.T01:three_prime_UTR
AGTTTCCACATCTTATAATA+AGG 0.307277 4:+13967692 MsG0480019055.01.T01:three_prime_UTR
AACTACTGGAGGCTACTTTC+AGG 0.308990 4:+13968649 MsG0480019055.01.T01:three_prime_UTR
AAAAGATGCAAGAATTTATT+GGG 0.322642 4:+13967618 MsG0480019055.01.T01:three_prime_UTR
AATGACATTAACTTGCAAAT+AGG 0.328925 4:-13965943 None:intergenic
AAATATGGGCCATGCGCTTC+AGG 0.329180 4:+13967830 MsG0480019055.01.T01:three_prime_UTR
CAAAACCCTTCAATCTCAAA+TGG 0.341182 4:+13965548 MsG0480019055.01.T01:CDS
GTGAGGACTGGTTGTCTACC+TGG 0.341571 4:+13967057 MsG0480019055.01.T01:three_prime_UTR
CTCAGAAACTATGTAATCTA+TGG 0.350072 4:-13967775 None:intergenic
CTTTACGCAGCTTGGATTCA+AGG 0.355620 4:+13966783 MsG0480019055.01.T01:CDS
TGACTTGGAGGAGGAAGAAA+AGG 0.368313 4:+13965700 MsG0480019055.01.T01:CDS
TAGGATTCTTGGTGCTGCTT+TGG 0.371467 4:+13965915 MsG0480019055.01.T01:CDS
ATGCTGTTAAACTCTGCTTC+AGG 0.374694 4:-13968393 None:intergenic
AGGGAAGAATTCAGAAAATA+GGG 0.381917 4:-13968369 None:intergenic
GTTTCCTGTGATCCATTAAA+GGG 0.382388 4:+13968772 MsG0480019055.01.T01:three_prime_UTR
GAATTGCATCAGAATTCATT+AGG 0.395674 4:+13968423 MsG0480019055.01.T01:three_prime_UTR
TTGCACATGCACTCCGGAAC+AGG 0.396099 4:-13968495 None:intergenic
TGTGGAAACTCATGGATTAA+TGG 0.400222 4:-13967679 None:intergenic
TTGTTTCCAAGTTCTTGAAC+TGG 0.412948 4:-13966965 None:intergenic
TCTTTCTATAGATCTTGTAT+AGG 0.417439 4:+13968823 MsG0480019055.01.T01:three_prime_UTR
ACCTTGCTAGTCCTGAGTTC+CGG 0.418631 4:-13968450 None:intergenic
GCGAAACCAGTTCAAGAACT+TGG 0.420208 4:+13966959 MsG0480019055.01.T01:CDS
AAGTGAAAGAGTGGTAATTT+CGG 0.422041 4:+13968598 MsG0480019055.01.T01:three_prime_UTR
TGCGAAGAAAGCTTCTCTAA+TGG 0.432693 4:+13967749 MsG0480019055.01.T01:three_prime_UTR
TCAAACCCATTTGAGATTGA+AGG 0.439951 4:-13965554 None:intergenic
TGAAACCACGCGTACATCAT+TGG 0.441708 4:-13966421 None:intergenic
ATGCAAGAATTTATTGGGCC+GGG 0.443277 4:+13967623 MsG0480019055.01.T01:three_prime_UTR
TTTGATCCCTCGAAAACTAC+TGG 0.449125 4:+13968635 MsG0480019055.01.T01:three_prime_UTR
AGAGAAGCTTTCTTCGCAAA+TGG 0.451160 4:-13967744 None:intergenic
GTTATTCCTTCCAGGGTCAC+AGG 0.455932 4:+13968297 MsG0480019055.01.T01:intron
TTATAAGATGTGGAAACTCA+TGG 0.456261 4:-13967687 None:intergenic
GGCTTATACCCTAACCCATC+TGG 0.457469 4:-13965757 None:intergenic
TGTCACGAAGTATCCTGTTC+CGG 0.458292 4:+13968482 MsG0480019055.01.T01:three_prime_UTR
CCAGGGTCACAGGGCTATGC+AGG 0.464293 4:+13968307 MsG0480019055.01.T01:intron
GGTGTTTGCTTTACGCAGCT+TGG 0.467316 4:+13966775 MsG0480019055.01.T01:CDS
GGTTCCTAGTGGAGTTGACT+TGG 0.467672 4:+13965685 MsG0480019055.01.T01:CDS
AAGGAAGATCTTGCATTGCC+TGG 0.471250 4:+13967711 MsG0480019055.01.T01:three_prime_UTR
GGAGGAGGAAGAAAAGGGTG+AGG 0.471319 4:+13965706 MsG0480019055.01.T01:CDS
TCCACCCAATGGTTGTCCCC+CGG 0.472197 4:-13967641 None:intergenic
AAAACCCTTCAATCTCAAAT+GGG 0.474207 4:+13965549 MsG0480019055.01.T01:CDS
TGCTGTTAAACTCTGCTTCA+GGG 0.476049 4:-13968392 None:intergenic
CCATCTCATGGAGGAAATAT+GGG 0.480168 4:+13967816 MsG0480019055.01.T01:three_prime_UTR
AGCTTATATGTCAGCCACTC+AGG 0.482733 4:+13968704 MsG0480019055.01.T01:three_prime_UTR
TAGCGCGAACGGATCCAACT+TGG 0.483932 4:-13966507 None:intergenic
ACCTGCTCTTCATCTAAGAA+TGG 0.490689 4:+13967020 MsG0480019055.01.T01:exon
GATGCAAGAATTTATTGGGC+CGG 0.492621 4:+13967622 MsG0480019055.01.T01:three_prime_UTR
CAAACCCATTTGAGATTGAA+GGG 0.494557 4:-13965553 None:intergenic
GATCTTCCTTTCAAGAGCTC+CGG 0.494862 4:-13967129 None:intergenic
TCCATTCTTAGATGAAGAGC+AGG 0.502648 4:-13967021 None:intergenic
TCTAAGAATGGAAAAGGATG+TGG 0.503408 4:+13967032 MsG0480019055.01.T01:exon
CTCTTCATGTCACTCCAAGT+TGG 0.504620 4:+13966493 MsG0480019055.01.T01:CDS
TGCAAGAATTTATTGGGCCG+GGG 0.505342 4:+13967624 MsG0480019055.01.T01:three_prime_UTR
GCAAATGGTTCTAGTTCTCC+AGG 0.505643 4:-13967729 None:intergenic
AACTCAGGACTAGCAAGGTC+GGG 0.506943 4:+13968454 MsG0480019055.01.T01:three_prime_UTR
CCTTTGCAGTTCAACAGAGA+AGG 0.513180 4:+13966754 MsG0480019055.01.T01:intron
TCTTTGTCCCTTGACTGCCA+TGG 0.516067 4:+13967187 MsG0480019055.01.T01:three_prime_UTR
TCTTAGATGAAGAGCAGGTA+GGG 0.521663 4:-13967016 None:intergenic
ATCTTCCTTATTATAAGATG+TGG 0.523297 4:-13967697 None:intergenic
TCCTAGTGGAGTTGACTTGG+AGG 0.524121 4:+13965688 MsG0480019055.01.T01:CDS
AACATTACATTAGCAATCAA+AGG 0.526009 4:-13965653 None:intergenic
TCTTCATCTAAGAATGGAAA+AGG 0.529212 4:+13967026 MsG0480019055.01.T01:exon
GATGCATTTGTCTTTGTTTG+GGG 0.531552 4:-13968347 None:intergenic
GACTTGGAGGAGGAAGAAAA+GGG 0.531687 4:+13965701 MsG0480019055.01.T01:CDS
GGTAACATCCATGGCAGTCA+AGG 0.535475 4:-13967195 None:intergenic
TAATGTAATGTTGCAAGCAA+AGG 0.539312 4:+13965664 MsG0480019055.01.T01:CDS
GAATGAGAGGAGAGAACGAC+CGG 0.540471 4:+13967110 MsG0480019055.01.T01:three_prime_UTR
CGAAGCTTCTGAAGATCTGA+AGG 0.542834 4:-13966821 None:intergenic
TATTTACCTGGTAACATCCA+TGG 0.544732 4:-13967204 None:intergenic
TCAGAATTCATTAGGACAGC+CGG 0.547453 4:+13968431 MsG0480019055.01.T01:three_prime_UTR
TGAGTTTGGAAGCAACCAGA+TGG 0.548979 4:+13965742 MsG0480019055.01.T01:CDS
CATTAGGACAGCCGGAACTC+AGG 0.555136 4:+13968439 MsG0480019055.01.T01:three_prime_UTR
AGAGGAGGACTTCCCTCCAC+TGG 0.555343 4:-13966474 None:intergenic
TTGATGCTGTTGTTATTGCT+AGG 0.555554 4:+13965896 MsG0480019055.01.T01:CDS
GTATCCCTTTAATGGATCAC+AGG 0.556376 4:-13968776 None:intergenic
ACGAGATTGTAAAGAATGAG+AGG 0.556539 4:+13967097 MsG0480019055.01.T01:three_prime_UTR
GAACGACCGGAGCTCTTGAA+AGG 0.557470 4:+13967123 MsG0480019055.01.T01:three_prime_UTR
CCATGAAGAAGAAAGATGGC+TGG 0.559490 4:+13967164 MsG0480019055.01.T01:three_prime_UTR
TTTACAATCTCGTCAAACTC+AGG 0.561693 4:-13967087 None:intergenic
GAGGAGGAAGAAAAGGGTGA+GGG 0.561708 4:+13965707 MsG0480019055.01.T01:CDS
CTTACCATGAAGAAGAAAGA+TGG 0.565853 4:+13967160 MsG0480019055.01.T01:three_prime_UTR
CCCATATTTCCTCCATGAGA+TGG 0.566943 4:-13967816 None:intergenic
TCTTCAGAAGCTTCGATGCA+AGG 0.571820 4:+13966829 MsG0480019055.01.T01:CDS
CAACTTGGAGTGACATGAAG+AGG 0.572279 4:-13966492 None:intergenic
TAGTGGAGTTGACTTGGAGG+AGG 0.574980 4:+13965691 MsG0480019055.01.T01:CDS
TTTATTCAGATATATGTACA+AGG 0.576413 4:-13968887 None:intergenic
TTTGTCATCAAGTGTGTGGA+TGG 0.580452 4:-13966450 None:intergenic
CTAAGAATGGAAAAGGATGT+GGG 0.582013 4:+13967033 MsG0480019055.01.T01:exon
GAACTCAGGACTAGCAAGGT+CGG 0.582708 4:+13968453 MsG0480019055.01.T01:three_prime_UTR
TTTGATTCAAAATCTGAACT+TGG 0.584212 4:+13965572 MsG0480019055.01.T01:CDS
CTTGGATTCAAGGCTATCAA+AGG 0.589401 4:+13966793 MsG0480019055.01.T01:CDS
TTATTCCTTCCAGGGTCACA+GGG 0.591271 4:+13968298 MsG0480019055.01.T01:intron
TGACTGCCATGGATGTTACC+AGG 0.594053 4:+13967198 MsG0480019055.01.T01:three_prime_UTR
ACTCTTTGAGATAGCGCGAA+CGG 0.595028 4:-13966518 None:intergenic
TCCTCCAAGTCAACTCCACT+AGG 0.596678 4:-13965689 None:intergenic
GCAAGAATTTATTGGGCCGG+GGG 0.602690 4:+13967625 MsG0480019055.01.T01:three_prime_UTR
AGATACTGAAAGTGAAAGAG+TGG 0.606957 4:+13968589 MsG0480019055.01.T01:three_prime_UTR
GTTAAACTCTGCTTCAGGGA+GGG 0.608437 4:-13968388 None:intergenic
TCAGGACTAGCAAGGTCGGG+AGG 0.608590 4:+13968457 MsG0480019055.01.T01:three_prime_UTR
GAGTTTGGAAGCAACCAGAT+GGG 0.612609 4:+13965743 MsG0480019055.01.T01:CDS
TGGCTTTGTCATCAAGTGTG+TGG 0.615307 4:-13966454 None:intergenic
GTAACATCCATGGCAGTCAA+GGG 0.621567 4:-13967194 None:intergenic
CTTGATGACAAAGCCAGTGG+AGG 0.623445 4:+13966461 MsG0480019055.01.T01:CDS
GCTGAGAGAATGCAGAGCAA+AGG 0.623716 4:+13966992 MsG0480019055.01.T01:CDS
AAGAATGGAAAAGGATGTGG+GGG 0.624655 4:+13967035 MsG0480019055.01.T01:exon
TTGATGACAAAGCCAGTGGA+GGG 0.626586 4:+13966462 MsG0480019055.01.T01:CDS
TCAAACTCAGGACTCAGACC+AGG 0.627651 4:-13967075 None:intergenic
CAGGACTAGCAAGGTCGGGA+GGG 0.628531 4:+13968458 MsG0480019055.01.T01:three_prime_UTR
TTTGGTAAAATCTGAACTTG+GGG 0.642353 4:+13965520 MsG0480019055.01.T01:CDS
GAGTCGTTGCACATGCACTC+CGG 0.647476 4:-13968501 None:intergenic
CTTGGAGTGACATGAAGAGG+AGG 0.650220 4:-13966489 None:intergenic
GATCCCTCGAAAACTACTGG+AGG 0.653574 4:+13968638 MsG0480019055.01.T01:three_prime_UTR
TTGCAAGCAAAGGTTCCTAG+TGG 0.655758 4:+13965674 MsG0480019055.01.T01:CDS
TTCTTAGATGAAGAGCAGGT+AGG 0.661472 4:-13967017 None:intergenic
GCCGGAACTCAGGACTAGCA+AGG 0.665088 4:+13968449 MsG0480019055.01.T01:three_prime_UTR
CTGGAGGGATGAATCAGCAG+AGG 0.666148 4:+13965863 MsG0480019055.01.T01:intron
TAAGAATGGAAAAGGATGTG+GGG 0.666905 4:+13967034 MsG0480019055.01.T01:exon
ATAGTCATACCTGAAGCGCA+TGG 0.668438 4:-13967839 None:intergenic
ACACTTGATGACAAAGCCAG+TGG 0.673399 4:+13966458 MsG0480019055.01.T01:CDS
TGTTAAACTCTGCTTCAGGG+AGG 0.699216 4:-13968389 None:intergenic
TCTTGCCAATGATGTACGCG+TGG 0.704047 4:+13966416 MsG0480019055.01.T01:CDS
ATAATGCGTGTACACCTGAG+TGG 0.769432 4:-13968718 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAAAATGAGATTTTTAA+TGG + Chr4:13965491-13965510 MsG0480019055.01.T01:CDS 10.0%
!!! TTTATTTGTTTTTGATTTAT+AGG + Chr4:13967572-13967591 MsG0480019055.01.T01:intron 10.0%
!! AAACAAAATCAAAATCAATA+AGG - Chr4:13966349-13966368 None:intergenic 15.0%
!! ATATTTAGCTGTTATAAATT+TGG + Chr4:13966176-13966195 MsG0480019055.01.T01:intron 15.0%
!! TTATTAAATATGAAGACTAA+AGG - Chr4:13968044-13968063 None:intergenic 15.0%
!!! TAAGTTTAGTTATTACATTT+TGG + Chr4:13966054-13966073 MsG0480019055.01.T01:intron 15.0%
!! AAAAAGATGCAAGAATTTAT+TGG + Chr4:13967617-13967636 MsG0480019055.01.T01:three_prime_UTR 20.0%
!! AAAACATATTTCTCCATAAA+TGG + Chr4:13968151-13968170 MsG0480019055.01.T01:intron 20.0%
!! AAAAGATGCAAGAATTTATT+GGG + Chr4:13967618-13967637 MsG0480019055.01.T01:three_prime_UTR 20.0%
!! AGAAGAATTTAATATTTACC+TGG - Chr4:13967219-13967238 None:intergenic 20.0%
!! CATACATATTAAGCATATTA+AGG - Chr4:13968745-13968764 None:intergenic 20.0%
!! TTACACTTATGAAACTATTT+GGG + Chr4:13967291-13967310 MsG0480019055.01.T01:intron 20.0%
!! TTCTGTGGAAATAAAAATTT+GGG + Chr4:13966705-13966724 MsG0480019055.01.T01:intron 20.0%
!! TTTACACTTATGAAACTATT+TGG + Chr4:13967290-13967309 MsG0480019055.01.T01:intron 20.0%
!! TTTATTCAGATATATGTACA+AGG - Chr4:13968890-13968909 None:intergenic 20.0%
!! TTTGGTATAAAAAGATTACA+CGG + Chr4:13968562-13968581 MsG0480019055.01.T01:three_prime_UTR 20.0%
!!! AAACAATCATAAAATTTTGC+AGG - Chr4:13968936-13968955 None:intergenic 20.0%
!!! AAATTCTTCTACTTTTGTAT+AGG + Chr4:13967229-13967248 MsG0480019055.01.T01:intron 20.0%
!!! ATGATACAATCAATTCTTTT+AGG + Chr4:13968097-13968116 MsG0480019055.01.T01:intron 20.0%
!!! TGATACAATCAATTCTTTTA+GGG + Chr4:13968098-13968117 MsG0480019055.01.T01:intron 20.0%
!!! TGTGCTTTTAGTAATTAAAA+AGG + Chr4:13968070-13968089 MsG0480019055.01.T01:intron 20.0%
! AACATTACATTAGCAATCAA+AGG - Chr4:13965656-13965675 None:intergenic 25.0%
! AATTAAGATAGTCACATTGA+TGG + Chr4:13968183-13968202 MsG0480019055.01.T01:intron 25.0%
! AATTGCATGATTACCATTTA+TGG - Chr4:13968167-13968186 None:intergenic 25.0%
! AGTTTCCACATCTTATAATA+AGG + Chr4:13967692-13967711 MsG0480019055.01.T01:three_prime_UTR 25.0%
! ATCTTCATTTGTGTAACAAT+CGG + Chr4:13966872-13966891 MsG0480019055.01.T01:intron 25.0%
! ATCTTCCTTATTATAAGATG+TGG - Chr4:13967700-13967719 None:intergenic 25.0%
! ATTATAGAAGAGAAAGTGAT+GGG + Chr4:13965800-13965819 MsG0480019055.01.T01:intron 25.0%
! ATTTGCAAGTTAATGTCATT+TGG + Chr4:13965946-13965965 MsG0480019055.01.T01:intron 25.0%
! CTTCTGTGGAAATAAAAATT+TGG + Chr4:13966704-13966723 MsG0480019055.01.T01:intron 25.0%
! GAATAGTATATATGAATGCA+TGG - Chr4:13967959-13967978 None:intergenic 25.0%
! GCTAAATATATATCCAAATC+TGG - Chr4:13966165-13966184 None:intergenic 25.0%
! GTAATCATGCTTACATATAT+TGG + Chr4:13967933-13967952 MsG0480019055.01.T01:intron 25.0%
! TCTTTCTATAGATCTTGTAT+AGG + Chr4:13968823-13968842 MsG0480019055.01.T01:three_prime_UTR 25.0%
! TGCTTAATATGTATGCAATT+AGG + Chr4:13968750-13968769 MsG0480019055.01.T01:three_prime_UTR 25.0%
! TTTACTATTCTTCTTGTTCA+TGG + Chr4:13965985-13966004 MsG0480019055.01.T01:intron 25.0%
! TTTGATTCAAAATCTGAACT+TGG + Chr4:13965572-13965591 MsG0480019055.01.T01:CDS 25.0%
!! AAAGATGAGATTTTGAATGA+TGG + Chr4:13965611-13965630 MsG0480019055.01.T01:CDS 25.0%
!! AAAGGTGAGTACAATTTTAT+AGG - Chr4:13968026-13968045 None:intergenic 25.0%
!! AAGGTGAGTACAATTTTATA+GGG - Chr4:13968025-13968044 None:intergenic 25.0%
!! TACAATTTTATAGGGACTAA+AGG - Chr4:13968017-13968036 None:intergenic 25.0%
!! TTTGCAAGTTAATGTCATTT+GGG + Chr4:13965947-13965966 MsG0480019055.01.T01:intron 25.0%
!! TTTTGGTAAAATCTGAACTT+GGG + Chr4:13965519-13965538 MsG0480019055.01.T01:CDS 25.0%
!!! AATGACATTAACTTGCAAAT+AGG - Chr4:13965946-13965965 None:intergenic 25.0%
!!! GAATAGAAAAAGGTATCTTA+TGG + Chr4:13965831-13965850 MsG0480019055.01.T01:intron 25.0%
!!! GATTTTTAATGGTGATGTTT+TGG + Chr4:13965502-13965521 MsG0480019055.01.T01:CDS 25.0%
!!! TCTTATGTTTTAGCATCTTT+AGG + Chr4:13966564-13966583 MsG0480019055.01.T01:intron 25.0%
AAAACCCTTCAATCTCAAAT+GGG + Chr4:13965549-13965568 MsG0480019055.01.T01:CDS 30.0%
AACAAGATCAAACTATGCTT+AGG - Chr4:13966122-13966141 None:intergenic 30.0%
AAGTGAAAGAGTGGTAATTT+CGG + Chr4:13968598-13968617 MsG0480019055.01.T01:three_prime_UTR 30.0%
AATAAGCTGGAAACAGTTTA+TGG - Chr4:13967343-13967362 None:intergenic 30.0%
AGGGAAGAATTCAGAAAATA+GGG - Chr4:13968372-13968391 None:intergenic 30.0%
ATCTTGCTAATGACCAATAT+TGG + Chr4:13966083-13966102 MsG0480019055.01.T01:intron 30.0%
CTCAGAAACTATGTAATCTA+TGG - Chr4:13967778-13967797 None:intergenic 30.0%
CTTAGATTATGCTCCAATAT+TGG - Chr4:13966099-13966118 None:intergenic 30.0%
GAATTGCATCAGAATTCATT+AGG + Chr4:13968423-13968442 MsG0480019055.01.T01:three_prime_UTR 30.0%
GATTATAGAAGAGAAAGTGA+TGG + Chr4:13965799-13965818 MsG0480019055.01.T01:intron 30.0%
GCAAAAGTAGACAAAAACTT+AGG - Chr4:13966597-13966616 None:intergenic 30.0%
GGATTGTGAAGAATAGAAAA+AGG + Chr4:13965821-13965840 MsG0480019055.01.T01:intron 30.0%
TAAAAGCAACCTGAAAACAT+AGG - Chr4:13966925-13966944 None:intergenic 30.0%
TAATGTAATGTTGCAAGCAA+AGG + Chr4:13965664-13965683 MsG0480019055.01.T01:CDS 30.0%
TATAGGTTGCTTAAAGCTTT+AGG + Chr4:13967589-13967608 MsG0480019055.01.T01:intron 30.0%
TCTTCATCTAAGAATGGAAA+AGG + Chr4:13967026-13967045 MsG0480019055.01.T01:exon 30.0%
TGTTTATCCAAAGATCCTAT+AGG + Chr4:13967503-13967522 MsG0480019055.01.T01:intron 30.0%
TTATAAGATGTGGAAACTCA+TGG - Chr4:13967690-13967709 None:intergenic 30.0%
TTGTGTATGTATCCCTTTAA+TGG - Chr4:13968787-13968806 None:intergenic 30.0%
TTTGGTAAAATCTGAACTTG+GGG + Chr4:13965520-13965539 MsG0480019055.01.T01:CDS 30.0%
! AATAAAAGCTTTGACTTCTG+TGG + Chr4:13966690-13966709 MsG0480019055.01.T01:intron 30.0%
! ACTGATTTCATAAGCTATCT+TGG - Chr4:13967378-13967397 None:intergenic 30.0%
! CTCTTATTCGAGTTTATTAC+TGG + Chr4:13967265-13967284 MsG0480019055.01.T01:intron 30.0%
! TTGATGAGTCGTGATTTTAT+AGG + Chr4:13968124-13968143 MsG0480019055.01.T01:intron 30.0%
!! GTTTTGGTAAAATCTGAACT+TGG + Chr4:13965518-13965537 MsG0480019055.01.T01:CDS 30.0%
!! TAGAAAAAGGTATCTTATGG+TGG + Chr4:13965834-13965853 MsG0480019055.01.T01:intron 30.0%
!! TCTTTTTATACCAAAAGCGT+TGG - Chr4:13968557-13968576 None:intergenic 30.0%
!!! AATGTTGCTTTTGAGAACTA+TGG - Chr4:13968678-13968697 None:intergenic 30.0%
AAACTATTTGGGAGAGCTTA+TGG + Chr4:13967302-13967321 MsG0480019055.01.T01:intron 35.0%
ACCTAAATGTTATTCCTTCC+AGG + Chr4:13968289-13968308 MsG0480019055.01.T01:intron 35.0%
ACGAGATTGTAAAGAATGAG+AGG + Chr4:13967097-13967116 MsG0480019055.01.T01:three_prime_UTR 35.0%
AGATACTGAAAGTGAAAGAG+TGG + Chr4:13968589-13968608 MsG0480019055.01.T01:three_prime_UTR 35.0%
CAAAACCCTTCAATCTCAAA+TGG + Chr4:13965548-13965567 MsG0480019055.01.T01:CDS 35.0%
CCTAAATGTTATTCCTTCCA+GGG + Chr4:13968290-13968309 MsG0480019055.01.T01:intron 35.0%
CTAAGAATGGAAAAGGATGT+GGG + Chr4:13967033-13967052 MsG0480019055.01.T01:exon 35.0%
CTTACCATGAAGAAGAAAGA+TGG + Chr4:13967160-13967179 MsG0480019055.01.T01:three_prime_UTR 35.0%
GAGGGAAGAATTCAGAAAAT+AGG - Chr4:13968373-13968392 None:intergenic 35.0%
GTTTCCTGTGATCCATTAAA+GGG + Chr4:13968772-13968791 MsG0480019055.01.T01:three_prime_UTR 35.0%
TAAGAATGGAAAAGGATGTG+GGG + Chr4:13967034-13967053 MsG0480019055.01.T01:exon 35.0%
TATTTACCTGGTAACATCCA+TGG - Chr4:13967207-13967226 None:intergenic 35.0%
TCTAAGAATGGAAAAGGATG+TGG + Chr4:13967032-13967051 MsG0480019055.01.T01:exon 35.0%
TGTTTGATGAAGACCAGATT+TGG + Chr4:13966149-13966168 MsG0480019055.01.T01:intron 35.0%
TTATAGGGACTAAAGGTGAA+AGG - Chr4:13968010-13968029 None:intergenic 35.0%
TTGTTTCCAAGTTCTTGAAC+TGG - Chr4:13966968-13966987 None:intergenic 35.0%
TTTACAATCTCGTCAAACTC+AGG - Chr4:13967090-13967109 None:intergenic 35.0%
! AATGTCATTTGGGAGATGAA+AGG + Chr4:13965957-13965976 MsG0480019055.01.T01:intron 35.0%
! CAAACCCATTTGAGATTGAA+GGG - Chr4:13965556-13965575 None:intergenic 35.0%
! GATGCATTTGTCTTTGTTTG+GGG - Chr4:13968350-13968369 None:intergenic 35.0%
! GGATGCATTTGTCTTTGTTT+GGG - Chr4:13968351-13968370 None:intergenic 35.0%
! GTTGTTATTGCTAGGATTCT+TGG + Chr4:13965904-13965923 MsG0480019055.01.T01:CDS 35.0%
! TATCTTATGGTGGTTGTTTC+TGG + Chr4:13965844-13965863 MsG0480019055.01.T01:intron 35.0%
! TCAAACCCATTTGAGATTGA+AGG - Chr4:13965557-13965576 None:intergenic 35.0%
! TGTGGAAACTCATGGATTAA+TGG - Chr4:13967682-13967701 None:intergenic 35.0%
! TTGATGCTGTTGTTATTGCT+AGG + Chr4:13965896-13965915 MsG0480019055.01.T01:CDS 35.0%
AAGAATGGAAAAGGATGTGG+GGG + Chr4:13967035-13967054 MsG0480019055.01.T01:exon 40.0%
AAGCTATCTTGGAGATCTTG+TGG - Chr4:13967367-13967386 None:intergenic 40.0%
ACCTGCTCTTCATCTAAGAA+TGG + Chr4:13967020-13967039 MsG0480019055.01.T01:exon 40.0%
AGAGAAGCTTTCTTCGCAAA+TGG - Chr4:13967747-13967766 None:intergenic 40.0%
AGCTATCTTGGAGATCTTGT+GGG - Chr4:13967366-13967385 None:intergenic 40.0%
AGTGAAGCCTATAGGATCTT+TGG - Chr4:13967513-13967532 None:intergenic 40.0%
ATGCAAGAATTTATTGGGCC+GGG + Chr4:13967623-13967642 MsG0480019055.01.T01:three_prime_UTR 40.0%
ATGCTGTTAAACTCTGCTTC+AGG - Chr4:13968396-13968415 None:intergenic 40.0%
CACTGAAAAGTGAAGCCTAT+AGG - Chr4:13967521-13967540 None:intergenic 40.0%
CCATCTCATGGAGGAAATAT+GGG + Chr4:13967816-13967835 MsG0480019055.01.T01:three_prime_UTR 40.0%
CCCTGGAAGGAATAACATTT+AGG - Chr4:13968293-13968312 None:intergenic 40.0%
CTTGGATTCAAGGCTATCAA+AGG + Chr4:13966793-13966812 MsG0480019055.01.T01:CDS 40.0%
GATGCAAGAATTTATTGGGC+CGG + Chr4:13967622-13967641 MsG0480019055.01.T01:three_prime_UTR 40.0%
GGAGTTGAAAAGAGTGAGTT+TGG + Chr4:13965728-13965747 MsG0480019055.01.T01:CDS 40.0%
GGGATGCATTTGTCTTTGTT+TGG - Chr4:13968352-13968371 None:intergenic 40.0%
GGTTTCCTGTGATCCATTAA+AGG + Chr4:13968771-13968790 MsG0480019055.01.T01:three_prime_UTR 40.0%
TCAGAATTCATTAGGACAGC+CGG + Chr4:13968431-13968450 MsG0480019055.01.T01:three_prime_UTR 40.0%
TCCATTCTTAGATGAAGAGC+AGG - Chr4:13967024-13967043 None:intergenic 40.0%
TCCCTACTGAAATCCAAACA+AGG - Chr4:13965781-13965800 None:intergenic 40.0%
TCTTAGATGAAGAGCAGGTA+GGG - Chr4:13967019-13967038 None:intergenic 40.0%
TGCGAAGAAAGCTTCTCTAA+TGG + Chr4:13967749-13967768 MsG0480019055.01.T01:three_prime_UTR 40.0%
TGCTGTTAAACTCTGCTTCA+GGG - Chr4:13968395-13968414 None:intergenic 40.0%
TTCTTAGATGAAGAGCAGGT+AGG - Chr4:13967020-13967039 None:intergenic 40.0%
TTTGATCCCTCGAAAACTAC+TGG + Chr4:13968635-13968654 MsG0480019055.01.T01:three_prime_UTR 40.0%
TTTGTCATCAAGTGTGTGGA+TGG - Chr4:13966453-13966472 None:intergenic 40.0%
! AAAGCTTCTTTTCCACCCAA+TGG - Chr4:13967655-13967674 None:intergenic 40.0%
! AGATTCAATGCCAACGCTTT+TGG + Chr4:13968544-13968563 MsG0480019055.01.T01:three_prime_UTR 40.0%
! CTCATCTCACCTATGTTTTC+AGG + Chr4:13966913-13966932 MsG0480019055.01.T01:intron 40.0%
! GTATCCCTTTAATGGATCAC+AGG - Chr4:13968779-13968798 None:intergenic 40.0%
!! AGCCTTGTTTGGATTTCAGT+AGG + Chr4:13965776-13965795 MsG0480019055.01.T01:intron 40.0%
!! CTATAGGCTTCACTTTTCAG+TGG + Chr4:13967519-13967538 MsG0480019055.01.T01:intron 40.0%
!! GCCTTGTTTGGATTTCAGTA+GGG + Chr4:13965777-13965796 MsG0480019055.01.T01:intron 40.0%
!! GTTAGGGTATAAGCCTTGTT+TGG + Chr4:13965765-13965784 MsG0480019055.01.T01:intron 40.0%
!! TTATGGTGGTTGTTTCTGGA+GGG + Chr4:13965848-13965867 MsG0480019055.01.T01:intron 40.0%
AAGGAAGATCTTGCATTGCC+TGG + Chr4:13967711-13967730 MsG0480019055.01.T01:three_prime_UTR 45.0%
AGCTTATATGTCAGCCACTC+AGG + Chr4:13968704-13968723 MsG0480019055.01.T01:three_prime_UTR 45.0%
ATAATGCGTGTACACCTGAG+TGG - Chr4:13968721-13968740 None:intergenic 45.0%
ATAGTCATACCTGAAGCGCA+TGG - Chr4:13967842-13967861 None:intergenic 45.0%
CAACTTGGAGTGACATGAAG+AGG - Chr4:13966495-13966514 None:intergenic 45.0%
CCAGCCATCTTTCTTCTTCA+TGG - Chr4:13967167-13967186 None:intergenic 45.0%
CCATGAAGAAGAAAGATGGC+TGG + Chr4:13967164-13967183 MsG0480019055.01.T01:three_prime_UTR 45.0%
CCCATATTTCCTCCATGAGA+TGG - Chr4:13967819-13967838 None:intergenic 45.0%
CCTTCTCTGTTGAACTGCAA+AGG - Chr4:13966757-13966776 None:intergenic 45.0%
CCTTTGCAGTTCAACAGAGA+AGG + Chr4:13966754-13966773 MsG0480019055.01.T01:intron 45.0%
CTCTTCATGTCACTCCAAGT+TGG + Chr4:13966493-13966512 MsG0480019055.01.T01:CDS 45.0%
CTTTACGCAGCTTGGATTCA+AGG + Chr4:13966783-13966802 MsG0480019055.01.T01:CDS 45.0%
GACTTGGAGGAGGAAGAAAA+GGG + Chr4:13965701-13965720 MsG0480019055.01.T01:CDS 45.0%
GAGATCTTGTGGGAATAAGC+TGG - Chr4:13967356-13967375 None:intergenic 45.0%
GAGTTTGGAAGCAACCAGAT+GGG + Chr4:13965743-13965762 MsG0480019055.01.T01:CDS 45.0%
GATCTTCCTTTCAAGAGCTC+CGG - Chr4:13967132-13967151 None:intergenic 45.0%
GCCATCTCATGGAGGAAATA+TGG + Chr4:13967815-13967834 MsG0480019055.01.T01:three_prime_UTR 45.0%
GCGAAACCAGTTCAAGAACT+TGG + Chr4:13966959-13966978 MsG0480019055.01.T01:CDS 45.0%
GTAACATCCATGGCAGTCAA+GGG - Chr4:13967197-13967216 None:intergenic 45.0%
GTTAAACTCTGCTTCAGGGA+GGG - Chr4:13968391-13968410 None:intergenic 45.0%
TCTTCAGAAGCTTCGATGCA+AGG + Chr4:13966829-13966848 MsG0480019055.01.T01:CDS 45.0%
TGAAACCACGCGTACATCAT+TGG - Chr4:13966424-13966443 None:intergenic 45.0%
TGAGTTTGGAAGCAACCAGA+TGG + Chr4:13965742-13965761 MsG0480019055.01.T01:CDS 45.0%
TGCAAGAATTTATTGGGCCG+GGG + Chr4:13967624-13967643 MsG0480019055.01.T01:three_prime_UTR 45.0%
TGTTAAACTCTGCTTCAGGG+AGG - Chr4:13968392-13968411 None:intergenic 45.0%
TTATTCCTTCCAGGGTCACA+GGG + Chr4:13968298-13968317 MsG0480019055.01.T01:intron 45.0%
TTGCAAGCAAAGGTTCCTAG+TGG + Chr4:13965674-13965693 MsG0480019055.01.T01:CDS 45.0%
! AACTACTGGAGGCTACTTTC+AGG + Chr4:13968649-13968668 MsG0480019055.01.T01:three_prime_UTR 45.0%
! ACACTTGATGACAAAGCCAG+TGG + Chr4:13966458-13966477 MsG0480019055.01.T01:CDS 45.0%
! CGAAGCTTCTGAAGATCTGA+AGG - Chr4:13966824-13966843 None:intergenic 45.0%
! GACGTTTTCATGCCATCTCA+TGG + Chr4:13967804-13967823 MsG0480019055.01.T01:three_prime_UTR 45.0%
! GTTTTCATGCCATCTCATGG+AGG + Chr4:13967807-13967826 MsG0480019055.01.T01:three_prime_UTR 45.0%
! TAGCCTCCAGTAGTTTTCGA+GGG - Chr4:13968644-13968663 None:intergenic 45.0%
! TGACTTGGAGGAGGAAGAAA+AGG + Chr4:13965700-13965719 MsG0480019055.01.T01:CDS 45.0%
! TGTCACGAAGTATCCTGTTC+CGG + Chr4:13968482-13968501 MsG0480019055.01.T01:three_prime_UTR 45.0%
! TTGATGACAAAGCCAGTGGA+GGG + Chr4:13966462-13966481 MsG0480019055.01.T01:CDS 45.0%
!! ACTCTTTGAGATAGCGCGAA+CGG - Chr4:13966521-13966540 None:intergenic 45.0%
!! CTTATGGTGGTTGTTTCTGG+AGG + Chr4:13965847-13965866 MsG0480019055.01.T01:intron 45.0%
!! GCAAATGGTTCTAGTTCTCC+AGG - Chr4:13967732-13967751 None:intergenic 45.0%
!! TAGGATTCTTGGTGCTGCTT+TGG + Chr4:13965915-13965934 MsG0480019055.01.T01:CDS 45.0%
!! TGGCTTTGTCATCAAGTGTG+TGG - Chr4:13966457-13966476 None:intergenic 45.0%
AAATATGGGCCATGCGCTTC+AGG + Chr4:13967830-13967849 MsG0480019055.01.T01:three_prime_UTR 50.0%
ACCTTGCTAGTCCTGAGTTC+CGG - Chr4:13968453-13968472 None:intergenic 50.0%
CTTGGAGTGACATGAAGAGG+AGG - Chr4:13966492-13966511 None:intergenic 50.0%
GAATGAGAGGAGAGAACGAC+CGG + Chr4:13967110-13967129 MsG0480019055.01.T01:three_prime_UTR 50.0%
GAGGAGGAAGAAAAGGGTGA+GGG + Chr4:13965707-13965726 MsG0480019055.01.T01:CDS 50.0%
GATCCCTCGAAAACTACTGG+AGG + Chr4:13968638-13968657 MsG0480019055.01.T01:three_prime_UTR 50.0%
GCAAGAATTTATTGGGCCGG+GGG + Chr4:13967625-13967644 MsG0480019055.01.T01:three_prime_UTR 50.0%
GCTGAGAGAATGCAGAGCAA+AGG + Chr4:13966992-13967011 MsG0480019055.01.T01:CDS 50.0%
GGCTTATACCCTAACCCATC+TGG - Chr4:13965760-13965779 None:intergenic 50.0%
GGTAACATCCATGGCAGTCA+AGG - Chr4:13967198-13967217 None:intergenic 50.0%
GGTGTTTGCTTTACGCAGCT+TGG + Chr4:13966775-13966794 MsG0480019055.01.T01:CDS 50.0%
GGTTCCTAGTGGAGTTGACT+TGG + Chr4:13965685-13965704 MsG0480019055.01.T01:CDS 50.0%
GTTATTCCTTCCAGGGTCAC+AGG + Chr4:13968297-13968316 MsG0480019055.01.T01:intron 50.0%
TCAAACTCAGGACTCAGACC+AGG - Chr4:13967078-13967097 None:intergenic 50.0%
TCCTCCAAGTCAACTCCACT+AGG - Chr4:13965692-13965711 None:intergenic 50.0%
TCTTGCCAATGATGTACGCG+TGG + Chr4:13966416-13966435 MsG0480019055.01.T01:CDS 50.0%
TCTTTGTCCCTTGACTGCCA+TGG + Chr4:13967187-13967206 MsG0480019055.01.T01:three_prime_UTR 50.0%
TGACTGCCATGGATGTTACC+AGG + Chr4:13967198-13967217 MsG0480019055.01.T01:three_prime_UTR 50.0%
! AACTCAGGACTAGCAAGGTC+GGG + Chr4:13968454-13968473 MsG0480019055.01.T01:three_prime_UTR 50.0%
! CTTGATGACAAAGCCAGTGG+AGG + Chr4:13966461-13966480 MsG0480019055.01.T01:CDS 50.0%
! GAACTCAGGACTAGCAAGGT+CGG + Chr4:13968453-13968472 MsG0480019055.01.T01:three_prime_UTR 50.0%
! GTAGCCTCCAGTAGTTTTCG+AGG - Chr4:13968645-13968664 None:intergenic 50.0%
! TGGAAGCAACCAGATGGGTT+AGG + Chr4:13965748-13965767 MsG0480019055.01.T01:intron 50.0%
!! GGAAGCAACCAGATGGGTTA+GGG + Chr4:13965749-13965768 MsG0480019055.01.T01:intron 50.0%
!! TAGTGGAGTTGACTTGGAGG+AGG + Chr4:13965691-13965710 MsG0480019055.01.T01:CDS 50.0%
!! TCCTAGTGGAGTTGACTTGG+AGG + Chr4:13965688-13965707 MsG0480019055.01.T01:CDS 50.0%
CATTAGGACAGCCGGAACTC+AGG + Chr4:13968439-13968458 MsG0480019055.01.T01:three_prime_UTR 55.0%
CTGGAGGGATGAATCAGCAG+AGG + Chr4:13965863-13965882 MsG0480019055.01.T01:intron 55.0%
GAACGACCGGAGCTCTTGAA+AGG + Chr4:13967123-13967142 MsG0480019055.01.T01:three_prime_UTR 55.0%
GAGTCGTTGCACATGCACTC+CGG - Chr4:13968504-13968523 None:intergenic 55.0%
GGAGGAGGAAGAAAAGGGTG+AGG + Chr4:13965706-13965725 MsG0480019055.01.T01:CDS 55.0%
TAGCGCGAACGGATCCAACT+TGG - Chr4:13966510-13966529 None:intergenic 55.0%
TGGAAAAGGATGTGGGGGTG+AGG + Chr4:13967040-13967059 MsG0480019055.01.T01:three_prime_UTR 55.0%
TTGCACATGCACTCCGGAAC+AGG - Chr4:13968498-13968517 None:intergenic 55.0%
!! GTGAGGACTGGTTGTCTACC+TGG + Chr4:13967057-13967076 MsG0480019055.01.T01:three_prime_UTR 55.0%
AAGGATGTGGGGGTGAGGAC+TGG + Chr4:13967045-13967064 MsG0480019055.01.T01:three_prime_UTR 60.0%
AGAGGAGGACTTCCCTCCAC+TGG - Chr4:13966477-13966496 None:intergenic 60.0%
CATAGCCCTGTGACCCTGGA+AGG - Chr4:13968306-13968325 None:intergenic 60.0%
TCCACCCAATGGTTGTCCCC+CGG - Chr4:13967644-13967663 None:intergenic 60.0%
! CAGGACTAGCAAGGTCGGGA+GGG + Chr4:13968458-13968477 MsG0480019055.01.T01:three_prime_UTR 60.0%
! GCCGGAACTCAGGACTAGCA+AGG + Chr4:13968449-13968468 MsG0480019055.01.T01:three_prime_UTR 60.0%
! TCAGGACTAGCAAGGTCGGG+AGG + Chr4:13968457-13968476 MsG0480019055.01.T01:three_prime_UTR 60.0%
CCAGGGTCACAGGGCTATGC+AGG + Chr4:13968307-13968326 MsG0480019055.01.T01:intron 65.0%
CCTGCATAGCCCTGTGACCC+TGG - Chr4:13968310-13968329 None:intergenic 65.0%
TGGGCCGGGGGACAACCATT+GGG + Chr4:13967637-13967656 MsG0480019055.01.T01:three_prime_UTR 65.0%
TTGGGCCGGGGGACAACCAT+TGG + Chr4:13967636-13967655 MsG0480019055.01.T01:three_prime_UTR 65.0%
GCCGGGGGACAACCATTGGG+TGG + Chr4:13967640-13967659 MsG0480019055.01.T01:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 13965488 13968955 13965488 ID=MsG0480019055.01;Name=MsG0480019055.01
Chr4 mRNA 13965488 13968955 13965488 ID=MsG0480019055.01.T01;Parent=MsG0480019055.01;Name=MsG0480019055.01.T01;_AED=0.25;_eAED=0.25;_QI=0|0.66|0.71|1|0.66|0.57|7|1086|238
Chr4 exon 13965488 13965764 13965488 ID=MsG0480019055.01.T01:exon:8640;Parent=MsG0480019055.01.T01
Chr4 exon 13965869 13965953 13965869 ID=MsG0480019055.01.T01:exon:8641;Parent=MsG0480019055.01.T01
Chr4 exon 13966374 13966538 13966374 ID=MsG0480019055.01.T01:exon:8642;Parent=MsG0480019055.01.T01
Chr4 exon 13966763 13966850 13966763 ID=MsG0480019055.01.T01:exon:8643;Parent=MsG0480019055.01.T01
Chr4 exon 13966935 13967219 13966935 ID=MsG0480019055.01.T01:exon:8644;Parent=MsG0480019055.01.T01
Chr4 exon 13967594 13967851 13967594 ID=MsG0480019055.01.T01:exon:8645;Parent=MsG0480019055.01.T01
Chr4 exon 13968311 13968955 13968311 ID=MsG0480019055.01.T01:exon:8646;Parent=MsG0480019055.01.T01
Chr4 CDS 13965488 13965764 13965488 ID=MsG0480019055.01.T01:cds;Parent=MsG0480019055.01.T01
Chr4 CDS 13965869 13965953 13965869 ID=MsG0480019055.01.T01:cds;Parent=MsG0480019055.01.T01
Chr4 CDS 13966374 13966538 13966374 ID=MsG0480019055.01.T01:cds;Parent=MsG0480019055.01.T01
Chr4 CDS 13966763 13966850 13966763 ID=MsG0480019055.01.T01:cds;Parent=MsG0480019055.01.T01
Chr4 CDS 13966935 13967036 13966935 ID=MsG0480019055.01.T01:cds;Parent=MsG0480019055.01.T01
Chr4 three_prime_UTR 13967037 13967219 13967037 ID=MsG0480019055.01.T01:three_prime_utr;Parent=MsG0480019055.01.T01
Chr4 three_prime_UTR 13967594 13967851 13967594 ID=MsG0480019055.01.T01:three_prime_utr;Parent=MsG0480019055.01.T01
Chr4 three_prime_UTR 13968311 13968955 13968311 ID=MsG0480019055.01.T01:three_prime_utr;Parent=MsG0480019055.01.T01
Gene Sequence

>MsG0480019055.01.T01

ATGAATAAAAATGAGATTTTTAATGGTGATGTTTTGGTAAAATCTGAACTTGGGGTTGTTCAAAACCCTTCAATCTCAAATGGGTTTGATTCAAAATCTGAACTTGGTGCTGTTTCAATGAATAAAGATGAGATTTTGAATGATGGTAGTTTGTCAAATTCACTTCCTTTGATTGCTAATGTAATGTTGCAAGCAAAGGTTCCTAGTGGAGTTGACTTGGAGGAGGAAGAAAAGGGTGAGGGAGTTGAAAAGAGTGAGTTTGGAAGCAACCAGATGGGGATGAATCAGCAGAGGAATCAAATTGTTGATGCTGTTGTTATTGCTAGGATTCTTGGTGCTGCTTTGGTTGTTCCTATTTGCAATGAATTTGCTGATATATTTGATTTTGAGCACTTCAAGAATGTTCTTGCCAATGATGTACGCGTGGTTTCATCATTGCCATCCACACACTTGATGACAAAGCCAGTGGAGGGAAGTCCTCCTCTTCATGTCACTCCAAGTTGGATCCGTTCGCGCTATCTCAAAGATTCAACAGAGAAGGTGTTTGCTTTACGCAGCTTGGATTCAAGGCTATCAAAGGATCTTCCTTCAGATCTTCAGAAGCTTCGATGCAAGGTTGCTTTTAGTGCATTGAGATTTGCGAAACCAGTTCAAGAACTTGGAAACAAGATTGCTGAGAGAATGCAGAGCAAAGGACCCTACCTGCTCTTCATCTAA
Protein sequence

>MsG0480019055.01.T01

MNKNEIFNGDVLVKSELGVVQNPSISNGFDSKSELGAVSMNKDEILNDGSLSNSLPLIANVMLQAKVPSGVDLEEEEKGEGVEKSEFGSNQMGMNQQRNQIVDAVVIARILGAALVVPICNEFADIFDFEHFKNVLANDVRVVSSLPSTHLMTKPVEGSPPLHVTPSWIRSRYLKDSTEKVFALRSLDSRLSKDLPSDLQKLRCKVAFSALRFAKPVQELGNKIAERMQSKGPYLLFI*