AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020262.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020262.01.T01 MTR_4g045670 92.400 829 60 2 51 876 32 860 0.0 1333
MsG0480020262.01.T01 MTR_2g089040 55.379 883 312 18 2 863 8 829 0.0 771
MsG0480020262.01.T01 MTR_4g081410 60.236 508 179 7 369 871 499 988 0.0 592
MsG0480020262.01.T01 MTR_4g081410 60.236 508 179 7 369 871 493 982 0.0 591
MsG0480020262.01.T01 MTR_2g082190 62.035 511 161 11 364 863 362 850 0.0 589
MsG0480020262.01.T01 MTR_5g015690 48.869 442 196 7 393 821 453 877 5.29e-125 399
MsG0480020262.01.T01 MTR_4g095780 48.611 432 195 7 403 821 409 826 1.11e-119 384
MsG0480020262.01.T01 MTR_4g087890 47.241 453 212 8 394 827 423 867 5.45e-118 380
MsG0480020262.01.T01 MTR_7g080920 47.742 465 196 11 356 808 536 965 7.60e-117 380
MsG0480020262.01.T01 MTR_8g027995 49.881 421 192 8 397 808 615 1025 1.73e-116 380
MsG0480020262.01.T01 MTR_1g083260 43.966 464 227 6 355 811 459 896 1.14e-109 358
MsG0480020262.01.T01 MTR_5g036540 41.048 458 233 8 373 808 341 783 4.38e-94 314
MsG0480020262.01.T01 MTR_8g062830 38.170 448 249 11 380 808 287 725 1.25e-85 290
MsG0480020262.01.T01 MTR_3g078623 38.310 509 265 12 347 833 176 657 5.29e-82 278
MsG0480020262.01.T01 MTR_4g109040 29.643 280 172 8 391 651 818 1091 1.86e-29 127
MsG0480020262.01.T01 MTR_4g109040 30.000 280 171 8 391 651 1152 1425 6.69e-29 125
MsG0480020262.01.T01 MTR_1g013800 27.303 304 195 8 355 643 1317 1609 3.70e-27 119
MsG0480020262.01.T01 MTR_5g026645 27.551 294 194 8 364 643 590 878 4.74e-26 115
MsG0480020262.01.T01 MTR_5g026645 27.551 294 194 8 364 643 749 1037 4.74e-26 115
MsG0480020262.01.T01 MTR_5g026645 27.551 294 194 8 364 643 764 1052 4.78e-26 115
MsG0480020262.01.T01 MTR_4g131020 26.877 253 174 4 401 643 785 1036 1.26e-25 114
MsG0480020262.01.T01 MTR_4g131020 26.877 253 174 4 401 643 785 1036 1.38e-25 114
MsG0480020262.01.T01 MTR_3g037080 26.007 273 179 5 383 643 1493 1754 2.55e-24 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020262.01.T01 AT5G54650 62.869 474 161 4 403 871 437 900 0.0 579
MsG0480020262.01.T01 AT5G54650 62.869 474 161 4 403 871 437 900 0.0 579
MsG0480020262.01.T01 AT5G67470 47.682 453 205 8 366 809 420 849 3.74e-119 384
MsG0480020262.01.T01 AT3G05470 47.955 440 208 7 381 809 440 869 1.81e-116 376
MsG0480020262.01.T01 AT3G25500 46.201 487 206 10 350 808 533 991 4.60e-112 368
MsG0480020262.01.T01 AT2G43800 44.259 479 230 10 406 876 445 894 2.48e-110 360
MsG0480020262.01.T01 AT1G59910 42.067 416 224 8 403 808 457 865 1.07e-90 308
MsG0480020262.01.T01 AT1G70140 39.735 453 236 9 370 808 284 713 1.77e-87 295
MsG0480020262.01.T01 AT5G48360 38.404 401 188 10 420 808 427 780 7.52e-69 244
MsG0480020262.01.T01 AT3G07540 34.112 428 216 9 393 809 463 835 2.42e-55 206
MsG0480020262.01.T01 AT4G15200 69.930 143 38 3 399 537 320 461 5.39e-54 195
MsG0480020262.01.T01 AT4G15200 69.930 143 38 3 399 537 321 462 5.51e-54 195
MsG0480020262.01.T01 AT1G24150 42.308 208 116 2 408 611 312 519 2.20e-42 163
MsG0480020262.01.T01 AT4G15200 35.059 425 172 16 133 501 50 426 4.49e-34 136
MsG0480020262.01.T01 AT5G07740 29.600 250 160 5 406 643 1244 1489 9.46e-28 121
MsG0480020262.01.T01 AT5G07740 29.600 250 160 5 406 643 1222 1467 9.90e-28 121
MsG0480020262.01.T01 AT5G58160 27.562 283 184 7 374 643 806 1080 2.40e-26 117
MsG0480020262.01.T01 AT1G31810 27.953 254 163 6 406 645 816 1063 1.82e-24 110
MsG0480020262.01.T01 AT1G31810 27.953 254 163 6 406 645 816 1063 1.82e-24 110
MsG0480020262.01.T01 AT3G32400 27.626 257 166 5 402 643 89 340 5.89e-24 107
MsG0480020262.01.T01 AT2G25050 25.623 281 165 6 402 643 738 1013 7.44e-21 99.4
MsG0480020262.01.T01 AT5G07760 28.000 175 124 1 471 643 523 697 4.01e-18 90.1
MsG0480020262.01.T01 AT3G32400 26.493 268 161 8 402 644 81 337 5.74e-18 88.6
MsG0480020262.01.T01 AT5G07760 28.000 175 124 1 471 643 523 697 5.88e-18 89.7
MsG0480020262.01.T01 AT5G07770 25.220 341 208 10 363 688 25 333 1.28e-17 87.8
MsG0480020262.01.T01 AT5G07770 25.220 341 208 10 363 688 166 474 1.31e-17 88.2
MsG0480020262.01.T01 AT5G07770 25.220 341 208 10 363 688 159 467 1.45e-17 88.2
MsG0480020262.01.T01 AT5G07650 27.586 174 124 1 472 643 470 643 6.99e-17 86.3
MsG0480020262.01.T01 AT5G07740 28.448 348 182 12 355 643 1184 1523 2.56e-16 84.7
MsG0480020262.01.T01 AT5G07780 28.977 176 122 1 471 643 144 319 3.55e-16 82.8
MsG0480020262.01.T01 AT5G07770 23.476 328 203 7 363 688 159 440 6.21e-15 79.7
MsG0480020262.01.T01 AT5G07650 25.628 199 120 3 472 643 470 667 2.20e-13 74.7

Find 231 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAAATTCTGTGCTTTCTT+TGG 0.161961 4:-37692134 None:intergenic
AAGTTGTGTAGAAAAGTTTA+TGG 0.174222 4:+37693745 MsG0480020262.01.T01:CDS
TTTGCAACTTCGTGGGATTT+TGG 0.188927 4:+37688823 MsG0480020262.01.T01:five_prime_UTR
GAACACTGATCTTAAGAATT+TGG 0.208361 4:+37693703 MsG0480020262.01.T01:CDS
TGCTAATGCTTTGTATTCTA+TGG 0.211623 4:+37694523 MsG0480020262.01.T01:three_prime_UTR
TCTTCATAGGCGATTGTTTC+CGG 0.221039 4:+37694063 MsG0480020262.01.T01:CDS
AAGGAAGGAAGCAATTATTT+TGG 0.225656 4:+37690475 MsG0480020262.01.T01:CDS
AGACATGAACAAGGAATTAT+TGG 0.230502 4:+37688938 MsG0480020262.01.T01:five_prime_UTR
TTAAAACTTTCCGACGTAAA+AGG 0.235442 4:+37693383 MsG0480020262.01.T01:CDS
AACGCTTCTGCTTGCTCTTT+CGG 0.235768 4:-37693483 None:intergenic
GCCATATCCCTCATCAATTT+AGG 0.245573 4:-37694396 None:intergenic
GAAATGATGGAGTCTTTATT+TGG 0.247521 4:+37692032 MsG0480020262.01.T01:CDS
CTTTCTTTGGGTCAATAATC+TGG 0.254238 4:-37692121 None:intergenic
TTGTTGTACACATATATATT+TGG 0.265440 4:+37688865 MsG0480020262.01.T01:five_prime_UTR
CATATATATTTGGAAGATAA+AGG 0.294995 4:+37688875 MsG0480020262.01.T01:five_prime_UTR
TAGTATTACAAATGTAAAAT+TGG 0.295953 4:+37694434 MsG0480020262.01.T01:three_prime_UTR
TCAGAACTTCCTTGATTTAG+TGG 0.297012 4:-37691522 None:intergenic
GGAGTTGGAGCACTTGTTAT+AGG 0.299651 4:-37690425 None:intergenic
GCGTGACTTCTTGATAATAT+TGG 0.301506 4:+37693898 MsG0480020262.01.T01:CDS
TGAAGTCTGTGAAGGGTTCT+TGG 0.310387 4:+37693954 MsG0480020262.01.T01:CDS
CTCCTTTGTGCTTTGGCTCA+AGG 0.313505 4:+37689030 MsG0480020262.01.T01:CDS
TCCATCGTTCATGCGGTTTC+CGG 0.314037 4:-37693318 None:intergenic
AATAGTTCCATTCTCTCATT+TGG 0.317480 4:+37689931 MsG0480020262.01.T01:intron
TGTCATCCTCCTTTGTGCTT+TGG 0.325605 4:+37689023 MsG0480020262.01.T01:CDS
GGAATCTTTCGCAACTTTAG+AGG 0.327750 4:+37692783 MsG0480020262.01.T01:CDS
TCCACATAAGGTTGTCCATT+TGG 0.329961 4:+37691179 MsG0480020262.01.T01:CDS
GGTGAATTTAGAAGCAATAA+TGG 0.331814 4:+37688969 MsG0480020262.01.T01:exon
CCACATAAGGTTGTCCATTT+GGG 0.342352 4:+37691180 MsG0480020262.01.T01:CDS
GGTGGTGGATGACCAGCTTT+TGG 0.344535 4:-37691450 None:intergenic
ATAAATTCTGTGCTTTCTTT+GGG 0.349559 4:-37692133 None:intergenic
CTTCTTGATAATATTGGATA+AGG 0.351109 4:+37693904 MsG0480020262.01.T01:CDS
GGTGGCCGTGGAGGAGGAAG+TGG 0.351923 4:-37691399 None:intergenic
AGCAACAACATCAGGAGAAA+TGG 0.352524 4:+37691317 MsG0480020262.01.T01:CDS
AATGGCTTTAGTTTAGGCTT+TGG 0.362541 4:-37691561 None:intergenic
TTCTCTCATTTGGTTGATAC+AGG 0.369266 4:+37689941 MsG0480020262.01.T01:CDS
GAGAAGAGGCCTCGAGCATC+AGG 0.370117 4:+37692761 MsG0480020262.01.T01:CDS
GGAGACGGCCCAGACTTATC+TGG 0.372040 4:-37690359 None:intergenic
TCCTTTGTGCTTTGGCTCAA+GGG 0.373779 4:+37689031 MsG0480020262.01.T01:CDS
ATGATCGTTTCTAGAATGTT+TGG 0.379090 4:-37690063 None:intergenic
AAAATTTGAAAAGGATTAAC+CGG 0.380381 4:-37690398 None:intergenic
AGGAAGTGGAGGCGGACCAG+GGG 0.385246 4:-37691385 None:intergenic
GGAGGAAGTGGAGGCGGACC+AGG 0.385674 4:-37691387 None:intergenic
TTTCATTATTCATGGAAAAC+AGG 0.388040 4:+37689107 MsG0480020262.01.T01:CDS
TCCTAAATTGATGAGGGATA+TGG 0.400159 4:+37694395 MsG0480020262.01.T01:three_prime_UTR
CAAATAGCAGGAACTTCTTC+CGG 0.400672 4:+37691345 MsG0480020262.01.T01:CDS
GACATAAATAACCGCACAAC+CGG 0.405298 4:-37689004 None:intergenic
GTGCCATCTTCAACAACGTT+TGG 0.409309 4:-37692594 None:intergenic
AGAATGTGTGGAAACGTTGC+AGG 0.409536 4:+37689967 MsG0480020262.01.T01:CDS
TGCCACACCATTGATTGATC+AGG 0.412215 4:-37691609 None:intergenic
CCACTCACTCCAGATAAGTC+TGG 0.412353 4:+37690350 MsG0480020262.01.T01:CDS
GCCATTGGCTTGGGAGGAGC+AGG 0.412952 4:-37691471 None:intergenic
CCTACTCCTGTTCCGAGTAC+TGG 0.415431 4:+37690314 MsG0480020262.01.T01:CDS
AGAGGAGGTGGCCGTGGAGG+AGG 0.415893 4:-37691405 None:intergenic
CTGTATTAGCATTTCCCAAA+TGG 0.419889 4:-37691194 None:intergenic
TCACCGAGTCCTAGTGCTAA+TGG 0.423135 4:+37690164 MsG0480020262.01.T01:CDS
CGATATATTGTTATTATCTC+CGG 0.427206 4:-37691283 None:intergenic
TGTTGAAAATTCGTCGATGA+AGG 0.427679 4:+37691260 MsG0480020262.01.T01:CDS
CGCCGCCTTCTGATCTTCAT+AGG 0.428693 4:+37694050 MsG0480020262.01.T01:CDS
GACAACGCTATTACACTTCG+TGG 0.431300 4:+37693418 MsG0480020262.01.T01:CDS
GGCTTGGGAGGAGCAGGTGG+TGG 0.432225 4:-37691465 None:intergenic
TCCACCTCCACCGCATCAAC+CGG 0.434739 4:+37690379 MsG0480020262.01.T01:CDS
TTCAGTTCCTCTTCTTGTGT+CGG 0.442222 4:-37692616 None:intergenic
TCAGAAGGCGGCGGCGGCTG+TGG 0.442685 4:-37694040 None:intergenic
GCTATAAATCTGTGAAGAAA+AGG 0.443492 4:+37694296 MsG0480020262.01.T01:intron
GAACAAGGAATTATTGGGTT+GGG 0.447112 4:+37688944 MsG0480020262.01.T01:five_prime_UTR
AATGCTAATACAGAAGAATC+TGG 0.447179 4:+37691204 MsG0480020262.01.T01:CDS
ACCGGTTGATGCGGTGGAGG+TGG 0.447511 4:-37690380 None:intergenic
AGAAAAGAAGATAATGTTGT+TGG 0.448503 4:+37693805 MsG0480020262.01.T01:CDS
CCCAAATGGACAACCTTATG+TGG 0.450340 4:-37691180 None:intergenic
ATAATGGAATTGACAAGAAC+CGG 0.451228 4:+37688985 MsG0480020262.01.T01:exon
GGCGCAAGAGGAGGTGGCCG+TGG 0.453169 4:-37691411 None:intergenic
CATCGTCATCGTCGTCATCA+TGG 0.454695 4:+37690086 MsG0480020262.01.T01:CDS
TATCCAAACGTTGTTGAAGA+TGG 0.455135 4:+37692591 MsG0480020262.01.T01:CDS
GTTGAAACAGCAACAACATC+AGG 0.457322 4:+37691309 MsG0480020262.01.T01:CDS
ATTGGATAAGGTTTGTAAAG+AGG 0.458782 4:+37693916 MsG0480020262.01.T01:CDS
GCTGGTGTTGATAGATGAAT+TGG 0.461041 4:-37690215 None:intergenic
GTTATTGATGCACTTAAAGA+AGG 0.461087 4:+37692194 MsG0480020262.01.T01:CDS
CGGAGATAATAACAATATAT+CGG 0.463103 4:+37691284 MsG0480020262.01.T01:CDS
GACATGAACAAGGAATTATT+GGG 0.465687 4:+37688939 MsG0480020262.01.T01:five_prime_UTR
AGAGAGGTTTCTCAAAGTAT+TGG 0.467404 4:+37692681 MsG0480020262.01.T01:CDS
TATTATTTCAGGTCCACATA+AGG 0.467955 4:+37691167 MsG0480020262.01.T01:intron
GCAACAACATCAGGAGAAAT+GGG 0.469329 4:+37691318 MsG0480020262.01.T01:CDS
CATGTTTATTCTTCGAGAAG+AGG 0.472587 4:+37692747 MsG0480020262.01.T01:CDS
TTGGTTAGCAAGTATCTTGA+AGG 0.472604 4:-37690044 None:intergenic
CTTGAAGCAGTACTCAAAAC+CGG 0.475753 4:+37693299 MsG0480020262.01.T01:CDS
CCGTGAGATTTGCAACTTCG+TGG 0.476594 4:+37688815 MsG0480020262.01.T01:five_prime_UTR
TCAACTCCAGTACTCGGAAC+AGG 0.476936 4:-37690320 None:intergenic
TTAAAAGAAGGTGAAGGAGT+TGG 0.478995 4:-37690440 None:intergenic
CAGGTTCAATGAGGAAATGA+TGG 0.480249 4:+37692019 MsG0480020262.01.T01:intron
CCTTTGTGCTTTGGCTCAAG+GGG 0.483638 4:+37689032 MsG0480020262.01.T01:CDS
ACTTTGAGAAACCTCTCTGC+TGG 0.486404 4:-37692676 None:intergenic
AGTGGTGGTGCCATCTTCTC+CGG 0.487709 4:+37693994 MsG0480020262.01.T01:CDS
GTGGTCCATGAGGCGTAACT+TGG 0.489218 4:-37691503 None:intergenic
CCTCCACCGCCGCCAAAAGC+TGG 0.489751 4:+37691438 MsG0480020262.01.T01:CDS
TAAATAATCACGTGGTGACT+CGG 0.493766 4:-37690123 None:intergenic
TCCATCCCCTAGGCATTCAT+TGG 0.496019 4:+37690187 MsG0480020262.01.T01:CDS
GGACGAGGCGCAAGAGGAGG+TGG 0.496996 4:-37691417 None:intergenic
AAGGAATTATTGGGTTGGGT+TGG 0.497179 4:+37688948 MsG0480020262.01.T01:five_prime_UTR
GCGATTGTTTCCGGCTATTG+CGG 0.499333 4:+37694072 MsG0480020262.01.T01:CDS
ATTGGCTTGGGAGGAGCAGG+TGG 0.499352 4:-37691468 None:intergenic
CGTGGAGGAGGAAGTGGAGG+CGG 0.500368 4:-37691393 None:intergenic
TTTGGCGGCGGTGGAGGACG+AGG 0.500919 4:-37691432 None:intergenic
ACTCTTCGATCCGCAATAGC+CGG 0.501778 4:-37694082 None:intergenic
CACTCACTCCAGATAAGTCT+GGG 0.504196 4:+37690351 MsG0480020262.01.T01:CDS
GGAAGTGGAGGCGGACCAGG+GGG 0.504762 4:-37691384 None:intergenic
TCAAGACGTTTGAAAGCGAA+TGG 0.507580 4:-37692712 None:intergenic
GGGAATGCAGGGAAAGATGA+AGG 0.510457 4:+37693854 MsG0480020262.01.T01:CDS
TGAAGATCAGAAGGCGGCGG+CGG 0.510620 4:-37694046 None:intergenic
GGTGGAGGACGAGGCGCAAG+AGG 0.512688 4:-37691423 None:intergenic
CTGAAACTGAGGTTATTCTC+TGG 0.513366 4:+37692634 MsG0480020262.01.T01:CDS
AATGTAACATATTATGCTAC+TGG 0.513677 4:+37694471 MsG0480020262.01.T01:three_prime_UTR
CGTGAGATTTGCAACTTCGT+GGG 0.514097 4:+37688816 MsG0480020262.01.T01:five_prime_UTR
GTATCAACCAAATGAGAGAA+TGG 0.514702 4:-37689938 None:intergenic
AATGTTGTTGGTTAAGAGTA+CGG 0.515675 4:+37693817 MsG0480020262.01.T01:CDS
TGCAAAACCTGATCAATCAA+TGG 0.516455 4:+37691602 MsG0480020262.01.T01:CDS
ACCGGAAACCGCATGAACGA+TGG 0.519505 4:+37693317 MsG0480020262.01.T01:CDS
ACCTGCTCCTCCCAAGCCAA+TGG 0.521150 4:+37691470 MsG0480020262.01.T01:CDS
GAAGAACACTATCGTAGCCT+TGG 0.521321 4:+37693551 MsG0480020262.01.T01:CDS
CCGGATACAAGTCATCATCC+AGG 0.522687 4:+37694013 MsG0480020262.01.T01:CDS
GCTCCTCCCAAGCCAATGGC+TGG 0.527475 4:+37691474 MsG0480020262.01.T01:CDS
TGAGTACTCGGAGCAGGAGT+AGG 0.529407 4:-37690257 None:intergenic
TGAACAAGGAATTATTGGGT+TGG 0.530549 4:+37688943 MsG0480020262.01.T01:five_prime_UTR
TTACCAGCCATTGGCTTGGG+AGG 0.533465 4:-37691477 None:intergenic
CTGTGTTGATTGTTAAAAGA+AGG 0.533681 4:-37690452 None:intergenic
GCAAGAGGAGGTGGCCGTGG+AGG 0.535310 4:-37691408 None:intergenic
CGCCTCCACTTCCTCCTCCA+CGG 0.535521 4:+37691394 MsG0480020262.01.T01:CDS
TTGCAGGAAAGAATTGATAG+AGG 0.537846 4:+37689983 MsG0480020262.01.T01:CDS
TGATGCGGTGGAGGTGGAGA+CGG 0.538520 4:-37690374 None:intergenic
ACCTCCAGCATAATCATTCG+AGG 0.539934 4:-37690603 None:intergenic
GGCGATACCAATGAATGCCT+AGG 0.542078 4:-37690194 None:intergenic
CAAGAAATTATACGTTCAGA+AGG 0.545236 4:+37693443 MsG0480020262.01.T01:CDS
CCTGGATGATGACTTGTATC+CGG 0.546244 4:-37694013 None:intergenic
GAAGGGTTCTTGGAAGAAAG+AGG 0.547105 4:+37693964 MsG0480020262.01.T01:CDS
GGAGGACGAGGCGCAAGAGG+AGG 0.549060 4:-37691420 None:intergenic
TTAACCTCGAATGATTATGC+TGG 0.551221 4:+37690599 MsG0480020262.01.T01:CDS
ACCAATGAATGCCTAGGGGA+TGG 0.551245 4:-37690188 None:intergenic
GAAGAACTTGCCAGTGTTGG+TGG 0.553090 4:-37690281 None:intergenic
GACGGTGATGAAGAACTTGC+TGG 0.553562 4:-37690233 None:intergenic
CCAGTACTCGGAACAGGAGT+AGG 0.553966 4:-37690314 None:intergenic
GAAAATTCGTCGATGAAGGC+CGG 0.554035 4:+37691264 MsG0480020262.01.T01:CDS
GGCCGTGGAGGAGGAAGTGG+AGG 0.555819 4:-37691396 None:intergenic
GCGATACCAATGAATGCCTA+GGG 0.555850 4:-37690193 None:intergenic
GGTGGATGAGTACTCGGAGC+AGG 0.556065 4:-37690263 None:intergenic
AGCAGAAGCGTTTCAAGCAT+AGG 0.558754 4:+37693494 MsG0480020262.01.T01:CDS
TGACTTGTATCCGGAGAAGA+TGG 0.559174 4:-37694004 None:intergenic
GGATTAACCGGTTGATGCGG+TGG 0.559395 4:-37690386 None:intergenic
GTGCTAATGGTCCATCCCCT+AGG 0.561213 4:+37690177 MsG0480020262.01.T01:CDS
GGCGGCGGCTGTGGTGACCC+TGG 0.562295 4:-37694031 None:intergenic
TTCGAGGTTAATACGAGCAA+AGG 0.567385 4:-37690587 None:intergenic
GAGGAAGTGGAGGCGGACCA+GGG 0.567992 4:-37691386 None:intergenic
TGCAGGAAAGAATTGATAGA+GGG 0.568018 4:+37689984 MsG0480020262.01.T01:CDS
GTGTGGCATGAGATCAATGC+AGG 0.569119 4:+37691624 MsG0480020262.01.T01:CDS
AGCTGCATTGAAGTCTGTGA+AGG 0.569218 4:+37693946 MsG0480020262.01.T01:CDS
AACGTTTGGATAAGCTCCGC+AGG 0.569661 4:-37692580 None:intergenic
CTTTGAGAAACCTCTCTGCT+GGG 0.571953 4:-37692675 None:intergenic
CACGAAGTTGCAAATCTCAC+GGG 0.573430 4:-37688814 None:intergenic
AGTAGCGCGGTTTCAAAACT+CGG 0.573683 4:+37693650 MsG0480020262.01.T01:CDS
CCTCATGGACCACTAAATCA+AGG 0.575288 4:+37691513 MsG0480020262.01.T01:CDS
GCACTAGGACTCGGTGACAT+TGG 0.576190 4:-37690158 None:intergenic
TCACTCGTTGATTAAGACTC+AGG 0.579496 4:+37693673 MsG0480020262.01.T01:CDS
CTTTGTGCTTTGGCTCAAGG+GGG 0.580123 4:+37689033 MsG0480020262.01.T01:CDS
ATGCGAAAGGTGAGGTGACG+TGG 0.582533 4:+37693771 MsG0480020262.01.T01:CDS
AATCAAGGAAGTTCTGATGA+AGG 0.583831 4:+37691528 MsG0480020262.01.T01:CDS
CCACGAAGTTGCAAATCTCA+CGG 0.585484 4:-37688815 None:intergenic
TTAACCGGTTGATGCGGTGG+AGG 0.586731 4:-37690383 None:intergenic
GAAGATGGCACCACCACTGA+CGG 0.590169 4:-37693989 None:intergenic
ACCTCGAATGATTATGCTGG+AGG 0.592817 4:+37690602 MsG0480020262.01.T01:CDS
TGAATGCTTGAGCGCCTCCA+CGG 0.594580 4:-37693346 None:intergenic
GAAATGGGAGAACAAATAGC+AGG 0.594856 4:+37691333 MsG0480020262.01.T01:CDS
ATTGATGAGGGATATGGCAA+TGG 0.596926 4:+37694401 MsG0480020262.01.T01:three_prime_UTR
TAACAATCAACACAGAAGGA+AGG 0.597915 4:+37690460 MsG0480020262.01.T01:CDS
CTACTGATGCAAAATTGAAG+AGG 0.598402 4:+37694322 MsG0480020262.01.T01:three_prime_UTR
GAGTACTCATCCACCAACAC+TGG 0.601681 4:+37690271 MsG0480020262.01.T01:CDS
GAAGAAAGAGGCTCCGTCAG+TGG 0.601957 4:+37693976 MsG0480020262.01.T01:CDS
TATTGATCCTAAATTGATGA+GGG 0.602127 4:+37694389 MsG0480020262.01.T01:three_prime_UTR
AGTGTTGGTGGATGAGTACT+CGG 0.602316 4:-37690269 None:intergenic
TGCTTGAGCGCCTCCACGGT+AGG 0.603445 4:-37693342 None:intergenic
GTATTGATCCTAAATTGATG+AGG 0.605823 4:+37694388 MsG0480020262.01.T01:three_prime_UTR
CTATGAAGATCAGAAGGCGG+CGG 0.610583 4:-37694049 None:intergenic
AAGAAGAGGAACTGAAACTG+AGG 0.613344 4:+37692623 MsG0480020262.01.T01:CDS
TGAGGTGACGTGGCTTGTTG+AGG 0.614529 4:+37693781 MsG0480020262.01.T01:CDS
AACCTGATCAATCAATGGTG+TGG 0.616315 4:+37691607 MsG0480020262.01.T01:CDS
AATCGCCTATGAAGATCAGA+AGG 0.618099 4:-37694055 None:intergenic
CTCGGAACAGGAGTAGGTGA+TGG 0.618728 4:-37690308 None:intergenic
TTGAAACTACTTGAAGTCCA+AGG 0.621593 4:-37693568 None:intergenic
TAGCTCTGATGATGATGATG+AGG 0.622036 4:+37694114 MsG0480020262.01.T01:CDS
TCTGGTGTTACTATTAACAA+AGG 0.622622 4:+37691222 MsG0480020262.01.T01:CDS
GGGGATGGACCATTAGCACT+AGG 0.624441 4:-37690173 None:intergenic
CGGATACAAGTCATCATCCA+GGG 0.626378 4:+37694014 MsG0480020262.01.T01:CDS
GGTAGGTTCCATCGTTCATG+CGG 0.628066 4:-37693325 None:intergenic
TCTGGAGAACTATCTCAACT+AGG 0.630968 4:+37692652 MsG0480020262.01.T01:CDS
GCTGCATTGAAGTCTGTGAA+GGG 0.631654 4:+37693947 MsG0480020262.01.T01:CDS
GATAGAGGGGAACAATGATG+TGG 0.633201 4:+37689998 MsG0480020262.01.T01:CDS
TGATACAGGCAGAGAATGTG+TGG 0.634965 4:+37689955 MsG0480020262.01.T01:CDS
GGAATGCAGGGAAAGATGAA+GGG 0.634981 4:+37693855 MsG0480020262.01.T01:CDS
CTCGGAGCAGGAGTAGGTGA+CGG 0.635040 4:-37690251 None:intergenic
CCAGACTTATCTGGAGTGAG+TGG 0.635897 4:-37690350 None:intergenic
GAAAGAGGCTCCGTCAGTGG+TGG 0.636944 4:+37693979 MsG0480020262.01.T01:CDS
CGTTTCAAGCATAGGAACAG+TGG 0.638841 4:+37693502 MsG0480020262.01.T01:CDS
CCCCTTGAGCCAAAGCACAA+AGG 0.639490 4:-37689032 None:intergenic
GATGGCACCGACACAAGAAG+AGG 0.643739 4:+37692609 MsG0480020262.01.T01:CDS
CCTTGATTTAGTGGTCCATG+AGG 0.644387 4:-37691513 None:intergenic
AGAAGAGGCCTCGAGCATCA+GGG 0.645718 4:+37692762 MsG0480020262.01.T01:CDS
AAGTTTATGGAACATGCGAA+AGG 0.648932 4:+37693758 MsG0480020262.01.T01:CDS
GACGAAGAACTTGCCAGTGT+TGG 0.649080 4:-37690284 None:intergenic
GAAAGATTCCCTGATGCTCG+AGG 0.649958 4:-37692770 None:intergenic
TCCGACGTAAAAGGAACAGA+CGG 0.650004 4:+37693392 MsG0480020262.01.T01:CDS
CTTGAGCCAAAGCACAAAGG+AGG 0.651040 4:-37689029 None:intergenic
AAAGGATTAACCGGTTGATG+CGG 0.651102 4:-37690389 None:intergenic
AAGACTGAGAAGGTGACAGT+AGG 0.652329 4:+37694497 MsG0480020262.01.T01:three_prime_UTR
TGTACAGAAGTATCTACAGA+AGG 0.653740 4:-37692092 None:intergenic
CTCAACTAGGCCCAGCAGAG+AGG 0.654022 4:+37692665 MsG0480020262.01.T01:CDS
ATTGACAAGAACCGGTTGTG+CGG 0.655898 4:+37688993 MsG0480020262.01.T01:CDS
TATGGAACATGCGAAAGGTG+AGG 0.664715 4:+37693763 MsG0480020262.01.T01:CDS
GGACCATTAGCACTAGGACT+CGG 0.664833 4:-37690167 None:intergenic
ACTACTTATCAGGTTCAATG+AGG 0.668495 4:+37692010 MsG0480020262.01.T01:intron
AACGATGGAACCTACCGTGG+AGG 0.674882 4:+37693332 MsG0480020262.01.T01:CDS
AGTTCAATGAGACATGAACA+AGG 0.675378 4:+37688929 MsG0480020262.01.T01:five_prime_UTR
CGCCTATGAAGATCAGAAGG+CGG 0.677435 4:-37694052 None:intergenic
ATTTGCGCTTTGTTATCGCG+AGG 0.677572 4:+37690532 MsG0480020262.01.T01:CDS
CTACTGGTATAAGACTGAGA+AGG 0.682802 4:+37694487 MsG0480020262.01.T01:three_prime_UTR
CGGTGATGCATTGAGTAGCG+CGG 0.690474 4:+37693637 MsG0480020262.01.T01:CDS
ATGAACGATGGAACCTACCG+TGG 0.695591 4:+37693329 MsG0480020262.01.T01:CDS
GCAGGAAAGAATTGATAGAG+GGG 0.701071 4:+37689985 MsG0480020262.01.T01:CDS
CAAGGAAGTTCTGATGAAGG+CGG 0.701451 4:+37691531 MsG0480020262.01.T01:CDS
TGATTGTTAAAAGAAGGTGA+AGG 0.715090 4:-37690446 None:intergenic
ATATTAGATAAATAATCACG+TGG 0.731603 4:-37690131 None:intergenic
AACAGGTAACGAGATTCCTG+CGG 0.736002 4:+37692564 MsG0480020262.01.T01:intron
GTTGTTGGTTAAGAGTACGG+CGG 0.743468 4:+37693820 MsG0480020262.01.T01:CDS
CGATACCAATGAATGCCTAG+GGG 0.744170 4:-37690192 None:intergenic
TGTGGCATGAGATCAATGCA+GGG 0.759112 4:+37691625 MsG0480020262.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATTTATACTTTCTTT+GGG - Chr4:37692982-37693001 None:intergenic 10.0%
!! TAATATATTTATACTTTCTT+TGG - Chr4:37692983-37693002 None:intergenic 10.0%
!!! TATTATTTTAAACTTTTGAT+TGG + Chr4:37694264-37694283 MsG0480020262.01.T01:intron 10.0%
!! ATAGGTTTAAAAATTTGAAA+AGG - Chr4:37690410-37690429 None:intergenic 15.0%
!! TAGTATTACAAATGTAAAAT+TGG + Chr4:37694434-37694453 MsG0480020262.01.T01:three_prime_UTR 15.0%
!! TATATCATATAGATTCTAAA+TGG + Chr4:37689457-37689476 MsG0480020262.01.T01:intron 15.0%
!!! ATTTCTGTTATTTTATTTGA+AGG + Chr4:37690810-37690829 MsG0480020262.01.T01:intron 15.0%
!!! ATTTTGGAAATTTAAAAGTT+TGG + Chr4:37688839-37688858 MsG0480020262.01.T01:five_prime_UTR 15.0%
!!! CATATTAGTTAATTTTTTTG+AGG + Chr4:37689895-37689914 MsG0480020262.01.T01:intron 15.0%
!!! CATATTTTACTTATTATTTC+AGG + Chr4:37691156-37691175 MsG0480020262.01.T01:intron 15.0%
!!! GGTGATTTTTTAATTTTTTT+TGG - Chr4:37689187-37689206 None:intergenic 15.0%
!!! TTTCTGTTATTTTATTTGAA+GGG + Chr4:37690811-37690830 MsG0480020262.01.T01:intron 15.0%
!!! TTTTTATCTTTCATTATTCA+TGG + Chr4:37689099-37689118 MsG0480020262.01.T01:CDS 15.0%
!! AAAATTTGAAAAGGATTAAC+CGG - Chr4:37690401-37690420 None:intergenic 20.0%
!! AGTAAAGTTAAAAAAGATGA+CGG + Chr4:37690563-37690582 MsG0480020262.01.T01:CDS 20.0%
!! ATAAAATTCCAAGTAAACTT+TGG + Chr4:37689832-37689851 MsG0480020262.01.T01:intron 20.0%
!! ATATTAGATAAATAATCACG+TGG - Chr4:37690134-37690153 None:intergenic 20.0%
!! ATCATACATATTGTGTTTAT+GGG + Chr4:37694202-37694221 MsG0480020262.01.T01:intron 20.0%
!! CATATATATTTGGAAGATAA+AGG + Chr4:37688875-37688894 MsG0480020262.01.T01:five_prime_UTR 20.0%
!! CATGAACTTATAAATCATTT+GGG + Chr4:37693161-37693180 MsG0480020262.01.T01:intron 20.0%
!! CATTAAACATCATTTATGAT+GGG + Chr4:37692884-37692903 MsG0480020262.01.T01:intron 20.0%
!! TAAACATATGAATATGGTTA+TGG + Chr4:37693202-37693221 MsG0480020262.01.T01:intron 20.0%
!! TCATTAAACATCATTTATGA+TGG + Chr4:37692883-37692902 MsG0480020262.01.T01:intron 20.0%
!! TTGTTGTACACATATATATT+TGG + Chr4:37688865-37688884 MsG0480020262.01.T01:five_prime_UTR 20.0%
!!! AATATTTTGATGAGTATGTT+AGG + Chr4:37692246-37692265 MsG0480020262.01.T01:intron 20.0%
!!! AGTTAATTTTTTTGAGGTAT+AGG + Chr4:37689901-37689920 MsG0480020262.01.T01:intron 20.0%
!!! CATCAAAATATTATTTCTCT+CGG - Chr4:37692238-37692257 None:intergenic 20.0%
!!! CCTCAATATTTAACAATTTT+GGG - Chr4:37690686-37690705 None:intergenic 20.0%
!!! TCCTCAATATTTAACAATTT+TGG - Chr4:37690687-37690706 None:intergenic 20.0%
!!! TTCATTTTATTTCATCGAAA+TGG + Chr4:37693228-37693247 MsG0480020262.01.T01:intron 20.0%
! AAAAAAGCAGCATTAATAGA+CGG + Chr4:37693617-37693636 MsG0480020262.01.T01:CDS 25.0%
! AAGTTGTGTAGAAAAGTTTA+TGG + Chr4:37693745-37693764 MsG0480020262.01.T01:CDS 25.0%
! AATGTAACATATTATGCTAC+TGG + Chr4:37694471-37694490 MsG0480020262.01.T01:three_prime_UTR 25.0%
! AGAAAAGAAGATAATGTTGT+TGG + Chr4:37693805-37693824 MsG0480020262.01.T01:CDS 25.0%
! ATAAATTCTGTGCTTTCTTT+GGG - Chr4:37692136-37692155 None:intergenic 25.0%
! ATACTGTATGGAAAAACTTA+CGG + Chr4:37691754-37691773 MsG0480020262.01.T01:intron 25.0%
! ATTATACTCCATAATGAGTT+TGG - Chr4:37692537-37692556 None:intergenic 25.0%
! CATCATACATATTGTGTTTA+TGG + Chr4:37694201-37694220 MsG0480020262.01.T01:intron 25.0%
! CCAAATGATTTATAAGTTCA+TGG - Chr4:37693163-37693182 None:intergenic 25.0%
! CCATGAACTTATAAATCATT+TGG + Chr4:37693160-37693179 MsG0480020262.01.T01:intron 25.0%
! CCCAAAATTGTTAAATATTG+AGG + Chr4:37690683-37690702 MsG0480020262.01.T01:intron 25.0%
! CGGAGATAATAACAATATAT+CGG + Chr4:37691284-37691303 MsG0480020262.01.T01:CDS 25.0%
! CTTGAGAAACAAATTAACTA+AGG - Chr4:37691011-37691030 None:intergenic 25.0%
! GACTGCAATTTAAAAAACTA+TGG - Chr4:37693012-37693031 None:intergenic 25.0%
! GGTACATTTATGTATTTCAT+AGG + Chr4:37689128-37689147 MsG0480020262.01.T01:intron 25.0%
! GTACATATAGACATAGAAAT+TGG + Chr4:37689854-37689873 MsG0480020262.01.T01:intron 25.0%
! GTATATAACACGATGAAATT+TGG - Chr4:37689485-37689504 None:intergenic 25.0%
! GTTGTAATGACTACTAATTT+AGG + Chr4:37689623-37689642 MsG0480020262.01.T01:intron 25.0%
! TACAAATCCAAAGATCAAAA+TGG - Chr4:37690896-37690915 None:intergenic 25.0%
! TATATGTACCAAAGTTTACT+TGG - Chr4:37689843-37689862 None:intergenic 25.0%
! TATTGATCCTAAATTGATGA+GGG + Chr4:37694389-37694408 MsG0480020262.01.T01:three_prime_UTR 25.0%
! TCTTCTGATTAGTAATTTCA+AGG - Chr4:37691059-37691078 None:intergenic 25.0%
! TTAAAAAATCACCGTAGTTA+AGG + Chr4:37689194-37689213 MsG0480020262.01.T01:intron 25.0%
! TTAAGATTTATAAAGCACAG+AGG - Chr4:37689556-37689575 None:intergenic 25.0%
! TTATACTCCATAATGAGTTT+GGG - Chr4:37692536-37692555 None:intergenic 25.0%
! TTTCATTATTCATGGAAAAC+AGG + Chr4:37689107-37689126 MsG0480020262.01.T01:CDS 25.0%
!! CAAATCTTTTCTAACAAAGA+AGG + Chr4:37692936-37692955 MsG0480020262.01.T01:intron 25.0%
!! CGATATATTGTTATTATCTC+CGG - Chr4:37691286-37691305 None:intergenic 25.0%
!! CTTCTTGATAATATTGGATA+AGG + Chr4:37693904-37693923 MsG0480020262.01.T01:CDS 25.0%
!! TCTGTGTTTTACTGAAATTT+TGG - Chr4:37691684-37691703 None:intergenic 25.0%
!!! CTGCAATATAAAAGTTTTAG+TGG + Chr4:37693049-37693068 MsG0480020262.01.T01:intron 25.0%
!!! GTAAGTGATTTTGTTATGAA+AGG + Chr4:37694156-37694175 MsG0480020262.01.T01:intron 25.0%
!!! TAAACTAAAGCCATTTTTCT+GGG + Chr4:37691569-37691588 MsG0480020262.01.T01:CDS 25.0%
!!! TATGTTCATGTTTTTTACGT+TGG + Chr4:37690635-37690654 MsG0480020262.01.T01:intron 25.0%
!!! TGAATAACCATTTTGATCTT+TGG + Chr4:37690886-37690905 MsG0480020262.01.T01:intron 25.0%
AACCTGATAAGTAGTCATAA+AGG - Chr4:37692005-37692024 None:intergenic 30.0%
AACCTTTATGACTACTTATC+AGG + Chr4:37692000-37692019 MsG0480020262.01.T01:intron 30.0%
AATAGTTCCATTCTCTCATT+TGG + Chr4:37689931-37689950 MsG0480020262.01.T01:intron 30.0%
AATGCTAATACAGAAGAATC+TGG + Chr4:37691204-37691223 MsG0480020262.01.T01:CDS 30.0%
AATTTGCAAATCTTAATCCC+AGG - Chr4:37692508-37692527 None:intergenic 30.0%
AGACATAGAAATTGGTCAAA+GGG + Chr4:37689862-37689881 MsG0480020262.01.T01:intron 30.0%
AGACATGAACAAGGAATTAT+TGG + Chr4:37688938-37688957 MsG0480020262.01.T01:five_prime_UTR 30.0%
ATAAAAAAACTAAAGTCCCG+CGG - Chr4:37689311-37689330 None:intergenic 30.0%
ATTAGTAGTCATTACAACCT+AGG - Chr4:37689621-37689640 None:intergenic 30.0%
ATTGGATAAGGTTTGTAAAG+AGG + Chr4:37693916-37693935 MsG0480020262.01.T01:CDS 30.0%
ATTTGCAAATCTTAATCCCA+GGG - Chr4:37692507-37692526 None:intergenic 30.0%
CAAGAAATTATACGTTCAGA+AGG + Chr4:37693443-37693462 MsG0480020262.01.T01:CDS 30.0%
CAATCTGATTGTTAACTTCA+TGG + Chr4:37690708-37690727 MsG0480020262.01.T01:intron 30.0%
CAATGTTATTGAGACATGTT+TGG - Chr4:37691976-37691995 None:intergenic 30.0%
GAACACTGATCTTAAGAATT+TGG + Chr4:37693703-37693722 MsG0480020262.01.T01:CDS 30.0%
GACATGAACAAGGAATTATT+GGG + Chr4:37688939-37688958 MsG0480020262.01.T01:five_prime_UTR 30.0%
GAGTTAGATTCATAAAGTTG+TGG + Chr4:37692278-37692297 MsG0480020262.01.T01:intron 30.0%
GATAAATTCTGTGCTTTCTT+TGG - Chr4:37692137-37692156 None:intergenic 30.0%
GATATACAATACAACCAACA+TGG - Chr4:37689443-37689462 None:intergenic 30.0%
GCTATAAATCTGTGAAGAAA+AGG + Chr4:37694296-37694315 MsG0480020262.01.T01:intron 30.0%
GGAGTATAATTGATTGAAAC+AGG + Chr4:37692547-37692566 MsG0480020262.01.T01:intron 30.0%
GGTCAAATAATCTCAAAAGA+CGG - Chr4:37689673-37689692 None:intergenic 30.0%
GGTGAATTTAGAAGCAATAA+TGG + Chr4:37688969-37688988 MsG0480020262.01.T01:exon 30.0%
GTTAACTTCATGGACAAATT+CGG + Chr4:37690718-37690737 MsG0480020262.01.T01:intron 30.0%
GTTATTGATGCACTTAAAGA+AGG + Chr4:37692194-37692213 MsG0480020262.01.T01:CDS 30.0%
TACAATTCCAGATCTCAAAA+TGG + Chr4:37690851-37690870 MsG0480020262.01.T01:intron 30.0%
TAGACATAGAAATTGGTCAA+AGG + Chr4:37689861-37689880 MsG0480020262.01.T01:intron 30.0%
TAGATTCATAAAGTTGTGGT+TGG + Chr4:37692282-37692301 MsG0480020262.01.T01:intron 30.0%
TCGCTGTAAACATATGAATA+TGG + Chr4:37693196-37693215 MsG0480020262.01.T01:intron 30.0%
TGAGTATGTTAGGTTCATAT+TGG + Chr4:37692256-37692275 MsG0480020262.01.T01:intron 30.0%
TGATTGTTAAAAGAAGGTGA+AGG - Chr4:37690449-37690468 None:intergenic 30.0%
TGCTAATGCTTTGTATTCTA+TGG + Chr4:37694523-37694542 MsG0480020262.01.T01:three_prime_UTR 30.0%
TTAAAACTTTCCGACGTAAA+AGG + Chr4:37693383-37693402 MsG0480020262.01.T01:CDS 30.0%
! AAGGAAGGAAGCAATTATTT+TGG + Chr4:37690475-37690494 MsG0480020262.01.T01:CDS 30.0%
! AATGTTGTTGGTTAAGAGTA+CGG + Chr4:37693817-37693836 MsG0480020262.01.T01:CDS 30.0%
! ATAATGGAATTGACAAGAAC+CGG + Chr4:37688985-37689004 MsG0480020262.01.T01:exon 30.0%
! ATATCTTTTTACCATTTCCC+TGG + Chr4:37692487-37692506 MsG0480020262.01.T01:intron 30.0%
! ATTATTTTCATGGGAATGCA+GGG + Chr4:37693843-37693862 MsG0480020262.01.T01:CDS 30.0%
! CTACTAATTTAGGTTCTTTC+CGG + Chr4:37689633-37689652 MsG0480020262.01.T01:intron 30.0%
! CTGCAATATAACGATTTTAG+AGG - Chr4:37692384-37692403 None:intergenic 30.0%
! CTTTTAACAATCAACACAGA+AGG + Chr4:37690456-37690475 MsG0480020262.01.T01:CDS 30.0%
! GAAATGATGGAGTCTTTATT+TGG + Chr4:37692032-37692051 MsG0480020262.01.T01:CDS 30.0%
! GACGAATTTTCAACAATAGA+TGG - Chr4:37691255-37691274 None:intergenic 30.0%
! GATGTTATTGATGATATCCA+CGG + Chr4:37689242-37689261 MsG0480020262.01.T01:intron 30.0%
! GTATTGATCCTAAATTGATG+AGG + Chr4:37694388-37694407 MsG0480020262.01.T01:three_prime_UTR 30.0%
! TATCTTTTTACCATTTCCCT+GGG + Chr4:37692488-37692507 MsG0480020262.01.T01:intron 30.0%
! TATTATTTCAGGTCCACATA+AGG + Chr4:37691167-37691186 MsG0480020262.01.T01:intron 30.0%
! TCAATTTTGCTGCACTATTA+AGG - Chr4:37692320-37692339 None:intergenic 30.0%
!! ATGATCGTTTCTAGAATGTT+TGG - Chr4:37690066-37690085 None:intergenic 30.0%
!! CAGAAAAATGGCTTTAGTTT+AGG - Chr4:37691570-37691589 None:intergenic 30.0%
!! CTGTGTTGATTGTTAAAAGA+AGG - Chr4:37690455-37690474 None:intergenic 30.0%
!! TCTGGTGTTACTATTAACAA+AGG + Chr4:37691222-37691241 MsG0480020262.01.T01:CDS 30.0%
!! TTTTATTTCATCGAAATGGC+AGG + Chr4:37693232-37693251 MsG0480020262.01.T01:intron 30.0%
!!! ATTTTTTTTGGACGCATTTG+CGG - Chr4:37689175-37689194 None:intergenic 30.0%
!!! CTAAACTAAAGCCATTTTTC+TGG + Chr4:37691568-37691587 MsG0480020262.01.T01:CDS 30.0%
!!! TGAATAACCATTTTGAGATC+TGG - Chr4:37690861-37690880 None:intergenic 30.0%
AAAAACTCAACTCCAGTACT+CGG - Chr4:37690329-37690348 None:intergenic 35.0%
AAATCTTAATCCCAGGGAAA+TGG - Chr4:37692501-37692520 None:intergenic 35.0%
AAGGAGACATGAAAAGCAAA+AGG + Chr4:37692955-37692974 MsG0480020262.01.T01:intron 35.0%
AAGTTTATGGAACATGCGAA+AGG + Chr4:37693758-37693777 MsG0480020262.01.T01:CDS 35.0%
ACAGAATTATCAACCAGACT+TGG - Chr4:37689511-37689530 None:intergenic 35.0%
ACTACTTATCAGGTTCAATG+AGG + Chr4:37692010-37692029 MsG0480020262.01.T01:intron 35.0%
AGAGAGGTTTCTCAAAGTAT+TGG + Chr4:37692681-37692700 MsG0480020262.01.T01:CDS 35.0%
AGTTCAATGAGACATGAACA+AGG + Chr4:37688929-37688948 MsG0480020262.01.T01:five_prime_UTR 35.0%
ATATACGTTATGTGATGCCT+AGG + Chr4:37689601-37689620 MsG0480020262.01.T01:intron 35.0%
CAAACACTTGTGATACTGTA+TGG + Chr4:37691742-37691761 MsG0480020262.01.T01:intron 35.0%
CAGTAAAACACAGACATGTT+TGG + Chr4:37691690-37691709 MsG0480020262.01.T01:intron 35.0%
CATGTTTATTCTTCGAGAAG+AGG + Chr4:37692747-37692766 MsG0480020262.01.T01:CDS 35.0%
CGTAAAAATGCATGCAAATG+CGG - Chr4:37693087-37693106 None:intergenic 35.0%
CTACTGATGCAAAATTGAAG+AGG + Chr4:37694322-37694341 MsG0480020262.01.T01:three_prime_UTR 35.0%
CTGTATTAGCATTTCCCAAA+TGG - Chr4:37691197-37691216 None:intergenic 35.0%
CTTTCTTTGGGTCAATAATC+TGG - Chr4:37692124-37692143 None:intergenic 35.0%
GAACAAGGAATTATTGGGTT+GGG + Chr4:37688944-37688963 MsG0480020262.01.T01:five_prime_UTR 35.0%
GATGGGATATATCCTAAATG+TGG + Chr4:37692901-37692920 MsG0480020262.01.T01:intron 35.0%
GTATCAACCAAATGAGAGAA+TGG - Chr4:37689941-37689960 None:intergenic 35.0%
TAAATAATCACGTGGTGACT+CGG - Chr4:37690126-37690145 None:intergenic 35.0%
TAACAATCAACACAGAAGGA+AGG + Chr4:37690460-37690479 MsG0480020262.01.T01:CDS 35.0%
TACAACAACTTGCCACATTT+AGG - Chr4:37692916-37692935 None:intergenic 35.0%
TATCCAAACGTTGTTGAAGA+TGG + Chr4:37692591-37692610 MsG0480020262.01.T01:CDS 35.0%
TCAGAACTTCCTTGATTTAG+TGG - Chr4:37691525-37691544 None:intergenic 35.0%
TCCTAAATTGATGAGGGATA+TGG + Chr4:37694395-37694414 MsG0480020262.01.T01:three_prime_UTR 35.0%
TGAACAAGGAATTATTGGGT+TGG + Chr4:37688943-37688962 MsG0480020262.01.T01:five_prime_UTR 35.0%
TGCAAAACCTGATCAATCAA+TGG + Chr4:37691602-37691621 MsG0480020262.01.T01:CDS 35.0%
TGCAGGAAAGAATTGATAGA+GGG + Chr4:37689984-37690003 MsG0480020262.01.T01:CDS 35.0%
TGGCAAAGTTAGGACAAATT+CGG + Chr4:37690746-37690765 MsG0480020262.01.T01:intron 35.0%
TGTTATATACCAACCAAGTC+TGG + Chr4:37689495-37689514 MsG0480020262.01.T01:intron 35.0%
TGTTGAAAATTCGTCGATGA+AGG + Chr4:37691260-37691279 MsG0480020262.01.T01:CDS 35.0%
TTAAAAGAAGGTGAAGGAGT+TGG - Chr4:37690443-37690462 None:intergenic 35.0%
TTAACCTCGAATGATTATGC+TGG + Chr4:37690599-37690618 MsG0480020262.01.T01:CDS 35.0%
TTAACCTTGTCCCAGAAAAA+TGG - Chr4:37691582-37691601 None:intergenic 35.0%
TTAGGACAAATTCGGAAAGT+TGG + Chr4:37690754-37690773 MsG0480020262.01.T01:intron 35.0%
TTATATTGCAGCCTCAATTG+CGG - Chr4:37693040-37693059 None:intergenic 35.0%
TTGAAACTACTTGAAGTCCA+AGG - Chr4:37693571-37693590 None:intergenic 35.0%
TTGCAGGAAAGAATTGATAG+AGG + Chr4:37689983-37690002 MsG0480020262.01.T01:CDS 35.0%
TTGGTTAGCAAGTATCTTGA+AGG - Chr4:37690047-37690066 None:intergenic 35.0%
TTTCAAGCCCAAACTCATTA+TGG + Chr4:37692526-37692545 MsG0480020262.01.T01:intron 35.0%
TTTGTAATTACGACGCTTTC+AGG - Chr4:37690938-37690957 None:intergenic 35.0%
! AATCAAGGAAGTTCTGATGA+AGG + Chr4:37691528-37691547 MsG0480020262.01.T01:CDS 35.0%
! AATTATCAACCAGACTTGGT+TGG - Chr4:37689507-37689526 None:intergenic 35.0%
! AGGTGAATCTTTTCTACGTT+CGG - Chr4:37692075-37692094 None:intergenic 35.0%
! ATTTTCCTTCCACATGAGTT+AGG + Chr4:37689334-37689353 MsG0480020262.01.T01:intron 35.0%
! CTCTTATTTCTCAAGCTCTT+CGG + Chr4:37691811-37691830 MsG0480020262.01.T01:intron 35.0%
! GATTATTTTCATGGGAATGC+AGG + Chr4:37693842-37693861 MsG0480020262.01.T01:CDS 35.0%
! GCGTGACTTCTTGATAATAT+TGG + Chr4:37693898-37693917 MsG0480020262.01.T01:CDS 35.0%
! TCTTATTTCTCAAGCTCTTC+GGG + Chr4:37691812-37691831 MsG0480020262.01.T01:intron 35.0%
! TTCTCAAGTGTGTCTTTTGT+TGG + Chr4:37691023-37691042 MsG0480020262.01.T01:intron 35.0%
! TTCTCTCATTTGGTTGATAC+AGG + Chr4:37689941-37689960 MsG0480020262.01.T01:CDS 35.0%
!! AAGTTCATGGTTCTGAATTG+TGG - Chr4:37693150-37693169 None:intergenic 35.0%
!! AATGGCTTTAGTTTAGGCTT+TGG - Chr4:37691564-37691583 None:intergenic 35.0%
!! AGTTTTAGTGGTGTCTTCAT+TGG + Chr4:37693061-37693080 MsG0480020262.01.T01:intron 35.0%
!! TGTACAGAAGTATCTACAGA+AGG - Chr4:37692095-37692114 None:intergenic 35.0%
!!! ATTTTGGCTGCATGTATATC+AGG + Chr4:37690491-37690510 MsG0480020262.01.T01:CDS 35.0%
AAAAACCAAGTTACGCCTCA+TGG + Chr4:37691498-37691517 MsG0480020262.01.T01:CDS 40.0%
AACATCGTACAACGCCTATT+GGG - Chr4:37689228-37689247 None:intergenic 40.0%
AACCTGATCAATCAATGGTG+TGG + Chr4:37691607-37691626 MsG0480020262.01.T01:CDS 40.0%
AAGAAGAGGAACTGAAACTG+AGG + Chr4:37692623-37692642 MsG0480020262.01.T01:CDS 40.0%
AATCGCCTATGAAGATCAGA+AGG - Chr4:37694058-37694077 None:intergenic 40.0%
AGCAACAACATCAGGAGAAA+TGG + Chr4:37691317-37691336 MsG0480020262.01.T01:CDS 40.0%
ATTCCTAAAGTCGCCCATTT+GGG - Chr4:37689366-37689385 None:intergenic 40.0%
ATTGATGAGGGATATGGCAA+TGG + Chr4:37694401-37694420 MsG0480020262.01.T01:three_prime_UTR 40.0%
CAAATAGCAGGAACTTCTTC+CGG + Chr4:37691345-37691364 MsG0480020262.01.T01:CDS 40.0%
CAACCTTCTCAATACCATGT+TGG + Chr4:37689426-37689445 MsG0480020262.01.T01:intron 40.0%
CAGGTTCAATGAGGAAATGA+TGG + Chr4:37692019-37692038 MsG0480020262.01.T01:intron 40.0%
CATGGACAAATTCGGAAAGT+TGG + Chr4:37690726-37690745 MsG0480020262.01.T01:intron 40.0%
CCACATAAGGTTGTCCATTT+GGG + Chr4:37691180-37691199 MsG0480020262.01.T01:CDS 40.0%
CGAAGAGCTTGAGAAATAAG+AGG - Chr4:37691813-37691832 None:intergenic 40.0%
CTACTGGTATAAGACTGAGA+AGG + Chr4:37694487-37694506 MsG0480020262.01.T01:three_prime_UTR 40.0%
CTGAAACTGAGGTTATTCTC+TGG + Chr4:37692634-37692653 MsG0480020262.01.T01:CDS 40.0%
CTTGAAGCAGTACTCAAAAC+CGG + Chr4:37693299-37693318 MsG0480020262.01.T01:CDS 40.0%
GAAATGGGAGAACAAATAGC+AGG + Chr4:37691333-37691352 MsG0480020262.01.T01:CDS 40.0%
GACATAAATAACCGCACAAC+CGG - Chr4:37689007-37689026 None:intergenic 40.0%
GCAACAACATCAGGAGAAAT+GGG + Chr4:37691318-37691337 MsG0480020262.01.T01:CDS 40.0%
GCAGGAAAGAATTGATAGAG+GGG + Chr4:37689985-37690004 MsG0480020262.01.T01:CDS 40.0%
GCCATATCCCTCATCAATTT+AGG - Chr4:37694399-37694418 None:intergenic 40.0%
GTGAAGAACTGAGAAAAAGC+AGG + Chr4:37693261-37693280 MsG0480020262.01.T01:CDS 40.0%
GTTGAAACAGCAACAACATC+AGG + Chr4:37691309-37691328 MsG0480020262.01.T01:CDS 40.0%
TAACATCGTACAACGCCTAT+TGG - Chr4:37689229-37689248 None:intergenic 40.0%
TCAAGACGTTTGAAAGCGAA+TGG - Chr4:37692715-37692734 None:intergenic 40.0%
TCCACATAAGGTTGTCCATT+TGG + Chr4:37691179-37691198 MsG0480020262.01.T01:CDS 40.0%
TCTGGAGAACTATCTCAACT+AGG + Chr4:37692652-37692671 MsG0480020262.01.T01:CDS 40.0%
TCTTCATAGGCGATTGTTTC+CGG + Chr4:37694063-37694082 MsG0480020262.01.T01:CDS 40.0%
TTCAGTTCCTCTTCTTGTGT+CGG - Chr4:37692619-37692638 None:intergenic 40.0%
TTCGAGGTTAATACGAGCAA+AGG - Chr4:37690590-37690609 None:intergenic 40.0%
TTCGGAAAGTTGGCAAAGTT+AGG + Chr4:37690736-37690755 MsG0480020262.01.T01:intron 40.0%
! AAAGGATTAACCGGTTGATG+CGG - Chr4:37690392-37690411 None:intergenic 40.0%
! AATTTAGGTTCTTTCCGGAG+AGG + Chr4:37689638-37689657 MsG0480020262.01.T01:intron 40.0%
! ATTGATGATATCCACGGCTT+AGG + Chr4:37689248-37689267 MsG0480020262.01.T01:intron 40.0%
! CAACATGGTATTGAGAAGGT+TGG - Chr4:37689428-37689447 None:intergenic 40.0%
! CAACCAACATGGTATTGAGA+AGG - Chr4:37689432-37689451 None:intergenic 40.0%
! GCGACTTTAGGAATCAAACT+CGG + Chr4:37689372-37689391 MsG0480020262.01.T01:intron 40.0%
! TCACTCGTTGATTAAGACTC+AGG + Chr4:37693673-37693692 MsG0480020262.01.T01:CDS 40.0%
! TTAAGGCTTTTGACCCCAAT+AGG + Chr4:37689211-37689230 MsG0480020262.01.T01:intron 40.0%
! TTCCATGTGTTTTCGCTAGT+CGG + Chr4:37690964-37690983 MsG0480020262.01.T01:intron 40.0%
! TTTGCAACTTCGTGGGATTT+TGG + Chr4:37688823-37688842 MsG0480020262.01.T01:five_prime_UTR 40.0%
!! AAGGAATTATTGGGTTGGGT+TGG + Chr4:37688948-37688967 MsG0480020262.01.T01:five_prime_UTR 40.0%
!! ACTTGGTTTTTACCAGCCAT+TGG - Chr4:37691489-37691508 None:intergenic 40.0%
!! GCTGGTGTTGATAGATGAAT+TGG - Chr4:37690218-37690237 None:intergenic 40.0%
!! TAGCTCTGATGATGATGATG+AGG + Chr4:37694114-37694133 MsG0480020262.01.T01:CDS 40.0%
!!! AAAGCCATTTTTCTGGGACA+AGG + Chr4:37691575-37691594 MsG0480020262.01.T01:CDS 40.0%
!!! AGTACGGCGGATTATTTTCA+TGG + Chr4:37693833-37693852 MsG0480020262.01.T01:CDS 40.0%
!!! GTACGGCGGATTATTTTCAT+GGG + Chr4:37693834-37693853 MsG0480020262.01.T01:CDS 40.0%
!!! TTCTACGTTCGGTTTTGTTC+TGG - Chr4:37692064-37692083 None:intergenic 40.0%
!!! TTTTTACCAGCCATTGGCTT+GGG - Chr4:37691483-37691502 None:intergenic 40.0%
AACAGGTAACGAGATTCCTG+CGG + Chr4:37692564-37692583 MsG0480020262.01.T01:intron 45.0%
AACCGACTAGCGAAAACACA+TGG - Chr4:37690969-37690988 None:intergenic 45.0%
AACGCTTCTGCTTGCTCTTT+CGG - Chr4:37693486-37693505 None:intergenic 45.0%
AAGACTGAGAAGGTGACAGT+AGG + Chr4:37694497-37694516 MsG0480020262.01.T01:three_prime_UTR 45.0%
ACAGCTACTCTACATCCATG+AGG - Chr4:37689719-37689738 None:intergenic 45.0%
ACATCGTACAACGCCTATTG+GGG - Chr4:37689227-37689246 None:intergenic 45.0%
ACCTCCAGCATAATCATTCG+AGG - Chr4:37690606-37690625 None:intergenic 45.0%
ACCTCGAATGATTATGCTGG+AGG + Chr4:37690602-37690621 MsG0480020262.01.T01:CDS 45.0%
ACTAATCATTGACCTGTCCG+CGG + Chr4:37689291-37689310 MsG0480020262.01.T01:intron 45.0%
AGAATGTGTGGAAACGTTGC+AGG + Chr4:37689967-37689986 MsG0480020262.01.T01:CDS 45.0%
AGCTGCAACTACAGCAATTG+TGG + Chr4:37692402-37692421 MsG0480020262.01.T01:intron 45.0%
AGCTGCATTGAAGTCTGTGA+AGG + Chr4:37693946-37693965 MsG0480020262.01.T01:CDS 45.0%
AGTAGCGCGGTTTCAAAACT+CGG + Chr4:37693650-37693669 MsG0480020262.01.T01:CDS 45.0%
AGTTAGGTTACCGCCCAAAT+GGG + Chr4:37689350-37689369 MsG0480020262.01.T01:intron 45.0%
ATCCACGGCTTAGGCTATTT+AGG + Chr4:37689257-37689276 MsG0480020262.01.T01:intron 45.0%
ATTGACAAGAACCGGTTGTG+CGG + Chr4:37688993-37689012 MsG0480020262.01.T01:CDS 45.0%
CACGAAGTTGCAAATCTCAC+GGG - Chr4:37688817-37688836 None:intergenic 45.0%
CACTCACTCCAGATAAGTCT+GGG + Chr4:37690351-37690370 MsG0480020262.01.T01:CDS 45.0%
CCACGAAGTTGCAAATCTCA+CGG - Chr4:37688818-37688837 None:intergenic 45.0%
CCCAAATGGACAACCTTATG+TGG - Chr4:37691183-37691202 None:intergenic 45.0%
CCTCATGGACCACTAAATCA+AGG + Chr4:37691513-37691532 MsG0480020262.01.T01:CDS 45.0%
CCTTGATTTAGTGGTCCATG+AGG - Chr4:37691516-37691535 None:intergenic 45.0%
CGATACCAATGAATGCCTAG+GGG - Chr4:37690195-37690214 None:intergenic 45.0%
CGGATACAAGTCATCATCCA+GGG + Chr4:37694014-37694033 MsG0480020262.01.T01:CDS 45.0%
CGTGAGATTTGCAACTTCGT+GGG + Chr4:37688816-37688835 MsG0480020262.01.T01:five_prime_UTR 45.0%
CGTTTCAAGCATAGGAACAG+TGG + Chr4:37693502-37693521 MsG0480020262.01.T01:CDS 45.0%
GAAAATTCGTCGATGAAGGC+CGG + Chr4:37691264-37691283 MsG0480020262.01.T01:CDS 45.0%
GAAGAACACTATCGTAGCCT+TGG + Chr4:37693551-37693570 MsG0480020262.01.T01:CDS 45.0%
GAAGGGTTCTTGGAAGAAAG+AGG + Chr4:37693964-37693983 MsG0480020262.01.T01:CDS 45.0%
GACAACGCTATTACACTTCG+TGG + Chr4:37693418-37693437 MsG0480020262.01.T01:CDS 45.0%
GATAGAGGGGAACAATGATG+TGG + Chr4:37689998-37690017 MsG0480020262.01.T01:CDS 45.0%
GATTCCTAAAGTCGCCCATT+TGG - Chr4:37689367-37689386 None:intergenic 45.0%
GCAGTCAATAACCGCAATTG+AGG + Chr4:37693026-37693045 MsG0480020262.01.T01:intron 45.0%
GCGATACCAATGAATGCCTA+GGG - Chr4:37690196-37690215 None:intergenic 45.0%
GCTGCATTGAAGTCTGTGAA+GGG + Chr4:37693947-37693966 MsG0480020262.01.T01:CDS 45.0%
GGAATGCAGGGAAAGATGAA+GGG + Chr4:37693855-37693874 MsG0480020262.01.T01:CDS 45.0%
GGGGTCAAAAGCCTTAACTA+CGG - Chr4:37689208-37689227 None:intergenic 45.0%
GGTAACCTAACTCATGTGGA+AGG - Chr4:37689342-37689361 None:intergenic 45.0%
GGTTTCCACAATTGCAATCG+CGG - Chr4:37692363-37692382 None:intergenic 45.0%
GTGCCATCTTCAACAACGTT+TGG - Chr4:37692597-37692616 None:intergenic 45.0%
TAAGCTCGATGGTAAGAGCT+TGG - Chr4:37689694-37689713 None:intergenic 45.0%
TACCTAAATAGCCTAAGCCG+TGG - Chr4:37689262-37689281 None:intergenic 45.0%
TATGGAACATGCGAAAGGTG+AGG + Chr4:37693763-37693782 MsG0480020262.01.T01:CDS 45.0%
TCCGACGTAAAAGGAACAGA+CGG + Chr4:37693392-37693411 MsG0480020262.01.T01:CDS 45.0%
TGAAGTCTGTGAAGGGTTCT+TGG + Chr4:37693954-37693973 MsG0480020262.01.T01:CDS 45.0%
TGATACAGGCAGAGAATGTG+TGG + Chr4:37689955-37689974 MsG0480020262.01.T01:CDS 45.0%
TGTCATCCTCCTTTGTGCTT+TGG + Chr4:37689023-37689042 MsG0480020262.01.T01:CDS 45.0%
TGTGGCATGAGATCAATGCA+GGG + Chr4:37691625-37691644 MsG0480020262.01.T01:CDS 45.0%
! ACTTTGAGAAACCTCTCTGC+TGG - Chr4:37692679-37692698 None:intergenic 45.0%
! ATTTGCGCTTTGTTATCGCG+AGG + Chr4:37690532-37690551 MsG0480020262.01.T01:CDS 45.0%
! CAAGGAAGTTCTGATGAAGG+CGG + Chr4:37691531-37691550 MsG0480020262.01.T01:CDS 45.0%
! CCTGGATGATGACTTGTATC+CGG - Chr4:37694016-37694035 None:intergenic 45.0%
! CTTTGAGAAACCTCTCTGCT+GGG - Chr4:37692678-37692697 None:intergenic 45.0%
! GTTGTTGGTTAAGAGTACGG+CGG + Chr4:37693820-37693839 MsG0480020262.01.T01:CDS 45.0%
! TCCGTCTGTTCCTTTTACGT+CGG - Chr4:37693396-37693415 None:intergenic 45.0%
! TCCTTTGTGCTTTGGCTCAA+GGG + Chr4:37689031-37689050 MsG0480020262.01.T01:CDS 45.0%
! TGACTTGTATCCGGAGAAGA+TGG - Chr4:37694007-37694026 None:intergenic 45.0%
! TGCCACACCATTGATTGATC+AGG - Chr4:37691612-37691631 None:intergenic 45.0%
!! AGCAGAAGCGTTTCAAGCAT+AGG + Chr4:37693494-37693513 MsG0480020262.01.T01:CDS 45.0%
!! AGTGTTGGTGGATGAGTACT+CGG - Chr4:37690272-37690291 None:intergenic 45.0%
!! GGAGTTGGAGCACTTGTTAT+AGG - Chr4:37690428-37690447 None:intergenic 45.0%
!! GTTTTTACCAGCCATTGGCT+TGG - Chr4:37691484-37691503 None:intergenic 45.0%
!! TTCGCTAGTCGGTTTGATGT+TGG + Chr4:37690975-37690994 MsG0480020262.01.T01:intron 45.0%
!!! ACGTTCGGTTTTGTTCTGGT+TGG - Chr4:37692060-37692079 None:intergenic 45.0%
!!! TTTTTTGGACGCATTTGCGG+TGG - Chr4:37689172-37689191 None:intergenic 45.0%
!! TAATTTAATATATATATACT+AGG - Chr4:37690661-37690680 None:intergenic 5.0%
!!! GTTTTTTTTTTTTAAATTAA+AGG + Chr4:37688897-37688916 MsG0480020262.01.T01:five_prime_UTR 5.0%
AAAACTAAAGTCCCGCGGAC+AGG - Chr4:37689306-37689325 None:intergenic 50.0%
AACGTTTGGATAAGCTCCGC+AGG - Chr4:37692583-37692602 None:intergenic 50.0%
ACCAATGAATGCCTAGGGGA+TGG - Chr4:37690191-37690210 None:intergenic 50.0%
ACCATCGAGCTTACACCTCA+TGG + Chr4:37689701-37689720 MsG0480020262.01.T01:intron 50.0%
ACTCTTCGATCCGCAATAGC+CGG - Chr4:37694085-37694104 None:intergenic 50.0%
ATGAACGATGGAACCTACCG+TGG + Chr4:37693329-37693348 MsG0480020262.01.T01:CDS 50.0%
CAAAGTTCGCAGCGTAACTG+CGG + Chr4:37693113-37693132 MsG0480020262.01.T01:intron 50.0%
CATCGTCATCGTCGTCATCA+TGG + Chr4:37690086-37690105 MsG0480020262.01.T01:CDS 50.0%
CCACTCACTCCAGATAAGTC+TGG + Chr4:37690350-37690369 MsG0480020262.01.T01:CDS 50.0%
CCGGATACAAGTCATCATCC+AGG + Chr4:37694013-37694032 MsG0480020262.01.T01:CDS 50.0%
CCGTGAGATTTGCAACTTCG+TGG + Chr4:37688815-37688834 MsG0480020262.01.T01:five_prime_UTR 50.0%
CGCCTATGAAGATCAGAAGG+CGG - Chr4:37694055-37694074 None:intergenic 50.0%
CTAATCATTGACCTGTCCGC+GGG + Chr4:37689292-37689311 MsG0480020262.01.T01:intron 50.0%
CTATGAAGATCAGAAGGCGG+CGG - Chr4:37694052-37694071 None:intergenic 50.0%
CTTGAGCCAAAGCACAAAGG+AGG - Chr4:37689032-37689051 None:intergenic 50.0%
GACGAAGAACTTGCCAGTGT+TGG - Chr4:37690287-37690306 None:intergenic 50.0%
GACGGAGTTCAAAACCTCTC+CGG - Chr4:37689655-37689674 None:intergenic 50.0%
GACGGTGATGAAGAACTTGC+TGG - Chr4:37690236-37690255 None:intergenic 50.0%
GAGTACTCATCCACCAACAC+TGG + Chr4:37690271-37690290 MsG0480020262.01.T01:CDS 50.0%
GAGTTAGGTTACCGCCCAAA+TGG + Chr4:37689349-37689368 MsG0480020262.01.T01:intron 50.0%
GCGATTGTTTCCGGCTATTG+CGG + Chr4:37694072-37694091 MsG0480020262.01.T01:CDS 50.0%
GGACCATTAGCACTAGGACT+CGG - Chr4:37690170-37690189 None:intergenic 50.0%
GGCGATACCAATGAATGCCT+AGG - Chr4:37690197-37690216 None:intergenic 50.0%
GGGAATGCAGGGAAAGATGA+AGG + Chr4:37693854-37693873 MsG0480020262.01.T01:CDS 50.0%
GGTAGGTTCCATCGTTCATG+CGG - Chr4:37693328-37693347 None:intergenic 50.0%
GTGTGGCATGAGATCAATGC+AGG + Chr4:37691624-37691643 MsG0480020262.01.T01:CDS 50.0%
TCAACTCCAGTACTCGGAAC+AGG - Chr4:37690323-37690342 None:intergenic 50.0%
TCACCGAGTCCTAGTGCTAA+TGG + Chr4:37690164-37690183 MsG0480020262.01.T01:CDS 50.0%
TCCATCCCCTAGGCATTCAT+TGG + Chr4:37690187-37690206 MsG0480020262.01.T01:CDS 50.0%
TCCATCGTTCATGCGGTTTC+CGG - Chr4:37693321-37693340 None:intergenic 50.0%
TCCATGAGGTGTAAGCTCGA+TGG - Chr4:37689705-37689724 None:intergenic 50.0%
! CCAGACTTATCTGGAGTGAG+TGG - Chr4:37690353-37690372 None:intergenic 50.0%
! CCTTTGTGCTTTGGCTCAAG+GGG + Chr4:37689032-37689051 MsG0480020262.01.T01:CDS 50.0%
! CTCCTTTGTGCTTTGGCTCA+AGG + Chr4:37689030-37689049 MsG0480020262.01.T01:CDS 50.0%
! CTTTGTGCTTTGGCTCAAGG+GGG + Chr4:37689033-37689052 MsG0480020262.01.T01:CDS 50.0%
! GAAGAACTTGCCAGTGTTGG+TGG - Chr4:37690284-37690303 None:intergenic 50.0%
AACGATGGAACCTACCGTGG+AGG + Chr4:37693332-37693351 MsG0480020262.01.T01:CDS 55.0%
ACCGGAAACCGCATGAACGA+TGG + Chr4:37693317-37693336 MsG0480020262.01.T01:CDS 55.0%
AGAAGAGGCCTCGAGCATCA+GGG + Chr4:37692762-37692781 MsG0480020262.01.T01:CDS 55.0%
ATGCGAAAGGTGAGGTGACG+TGG + Chr4:37693771-37693790 MsG0480020262.01.T01:CDS 55.0%
CCAGTACTCGGAACAGGAGT+AGG - Chr4:37690317-37690336 None:intergenic 55.0%
CCCCTTGAGCCAAAGCACAA+AGG - Chr4:37689035-37689054 None:intergenic 55.0%
CCTAAAGTCGCCCATTTGGG+CGG - Chr4:37689363-37689382 None:intergenic 55.0%
CCTACTCCTGTTCCGAGTAC+TGG + Chr4:37690314-37690333 MsG0480020262.01.T01:CDS 55.0%
CGCCGCCTTCTGATCTTCAT+AGG + Chr4:37694050-37694069 MsG0480020262.01.T01:CDS 55.0%
CGGTGATGCATTGAGTAGCG+CGG + Chr4:37693637-37693656 MsG0480020262.01.T01:CDS 55.0%
CTCGGAACAGGAGTAGGTGA+TGG - Chr4:37690311-37690330 None:intergenic 55.0%
GAAGAAAGAGGCTCCGTCAG+TGG + Chr4:37693976-37693995 MsG0480020262.01.T01:CDS 55.0%
GAAGATGGCACCACCACTGA+CGG - Chr4:37693992-37694011 None:intergenic 55.0%
GGGCGGTAACCTAACTCATG+TGG - Chr4:37689346-37689365 None:intergenic 55.0%
GGGGATGGACCATTAGCACT+AGG - Chr4:37690176-37690195 None:intergenic 55.0%
GTGCTAATGGTCCATCCCCT+AGG + Chr4:37690177-37690196 MsG0480020262.01.T01:CDS 55.0%
GTGGTCCATGAGGCGTAACT+TGG - Chr4:37691506-37691525 None:intergenic 55.0%
TGAATGCTTGAGCGCCTCCA+CGG - Chr4:37693349-37693368 None:intergenic 55.0%
TGAGTACTCGGAGCAGGAGT+AGG - Chr4:37690260-37690279 None:intergenic 55.0%
TGCAGCCGCGATTGCAATTG+TGG + Chr4:37692355-37692374 MsG0480020262.01.T01:intron 55.0%
! GGATTAACCGGTTGATGCGG+TGG - Chr4:37690389-37690408 None:intergenic 55.0%
! GGTGGATGACCAGCTTTTGG+CGG - Chr4:37691450-37691469 None:intergenic 55.0%
! TTAACCGGTTGATGCGGTGG+AGG - Chr4:37690386-37690405 None:intergenic 55.0%
!! AGTGGTGGTGCCATCTTCTC+CGG + Chr4:37693994-37694013 MsG0480020262.01.T01:CDS 55.0%
!! GATGGCACCGACACAAGAAG+AGG + Chr4:37692609-37692628 MsG0480020262.01.T01:CDS 55.0%
!! GCACTAGGACTCGGTGACAT+TGG - Chr4:37690161-37690180 None:intergenic 55.0%
!! TGAGGTGACGTGGCTTGTTG+AGG + Chr4:37693781-37693800 MsG0480020262.01.T01:CDS 55.0%
!! TTACCAGCCATTGGCTTGGG+AGG - Chr4:37691480-37691499 None:intergenic 55.0%
!!! GGTGGTGGATGACCAGCTTT+TGG - Chr4:37691453-37691472 None:intergenic 55.0%
ACCTGCTCCTCCCAAGCCAA+TGG + Chr4:37691470-37691489 MsG0480020262.01.T01:CDS 60.0%
CCGCCCAAATGGGCGACTTT+AGG + Chr4:37689360-37689379 MsG0480020262.01.T01:intron 60.0%
CTCAACTAGGCCCAGCAGAG+AGG + Chr4:37692665-37692684 MsG0480020262.01.T01:CDS 60.0%
CTCGGAGCAGGAGTAGGTGA+CGG - Chr4:37690254-37690273 None:intergenic 60.0%
GAAAGAGGCTCCGTCAGTGG+TGG + Chr4:37693979-37693998 MsG0480020262.01.T01:CDS 60.0%
GAGAAGAGGCCTCGAGCATC+AGG + Chr4:37692761-37692780 MsG0480020262.01.T01:CDS 60.0%
GGAGACGGCCCAGACTTATC+TGG - Chr4:37690362-37690381 None:intergenic 60.0%
GGTGGATGAGTACTCGGAGC+AGG - Chr4:37690266-37690285 None:intergenic 60.0%
TCCACCTCCACCGCATCAAC+CGG + Chr4:37690379-37690398 MsG0480020262.01.T01:CDS 60.0%
TGAAGATCAGAAGGCGGCGG+CGG - Chr4:37694049-37694068 None:intergenic 60.0%
TGATGCGGTGGAGGTGGAGA+CGG - Chr4:37690377-37690396 None:intergenic 60.0%
TTGGCTCAAGGGGGCTCAGA+GGG + Chr4:37689042-37689061 MsG0480020262.01.T01:CDS 60.0%
! GGATGACCAGCTTTTGGCGG+CGG - Chr4:37691447-37691466 None:intergenic 60.0%
! TTTGGCTCAAGGGGGCTCAG+AGG + Chr4:37689041-37689060 MsG0480020262.01.T01:CDS 60.0%
!! ATTGGCTTGGGAGGAGCAGG+TGG - Chr4:37691471-37691490 None:intergenic 60.0%
AGGAAGTGGAGGCGGACCAG+GGG - Chr4:37691388-37691407 None:intergenic 65.0%
CGCCTCCACTTCCTCCTCCA+CGG + Chr4:37691394-37691413 MsG0480020262.01.T01:CDS 65.0%
CGTGGAGGAGGAAGTGGAGG+CGG - Chr4:37691396-37691415 None:intergenic 65.0%
GAGGAAGTGGAGGCGGACCA+GGG - Chr4:37691389-37691408 None:intergenic 65.0%
GCTCCTCCCAAGCCAATGGC+TGG + Chr4:37691474-37691493 MsG0480020262.01.T01:CDS 65.0%
TCAAGGGGGCTCAGAGGGGA+AGG + Chr4:37689047-37689066 MsG0480020262.01.T01:CDS 65.0%
TGCTTGAGCGCCTCCACGGT+AGG - Chr4:37693345-37693364 None:intergenic 65.0%
TGGCTCAAGGGGGCTCAGAG+GGG + Chr4:37689043-37689062 MsG0480020262.01.T01:CDS 65.0%
! ACCGGTTGATGCGGTGGAGG+TGG - Chr4:37690383-37690402 None:intergenic 65.0%
! GGGTGGAGGGGCAGGTTTTC+CGG - Chr4:37691367-37691386 None:intergenic 65.0%
! TGACCAGCTTTTGGCGGCGG+TGG - Chr4:37691444-37691463 None:intergenic 65.0%
!! GCCATTGGCTTGGGAGGAGC+AGG - Chr4:37691474-37691493 None:intergenic 65.0%
AAACCTGCCCCTCCACCCCC+TGG + Chr4:37691369-37691388 MsG0480020262.01.T01:CDS 70.0%
AGAGGAGGTGGCCGTGGAGG+AGG - Chr4:37691408-37691427 None:intergenic 70.0%
CCTCCACCGCCGCCAAAAGC+TGG + Chr4:37691438-37691457 MsG0480020262.01.T01:CDS 70.0%
GCAAGAGGAGGTGGCCGTGG+AGG - Chr4:37691411-37691430 None:intergenic 70.0%
GGAAGTGGAGGCGGACCAGG+GGG - Chr4:37691387-37691406 None:intergenic 70.0%
GGACGAGGCGCAAGAGGAGG+TGG - Chr4:37691420-37691439 None:intergenic 70.0%
GGAGGAAGTGGAGGCGGACC+AGG - Chr4:37691390-37691409 None:intergenic 70.0%
GGAGGACGAGGCGCAAGAGG+AGG - Chr4:37691423-37691442 None:intergenic 70.0%
GGCCGTGGAGGAGGAAGTGG+AGG - Chr4:37691399-37691418 None:intergenic 70.0%
GGCTTGGGAGGAGCAGGTGG+TGG - Chr4:37691468-37691487 None:intergenic 70.0%
GGTGGAGGACGAGGCGCAAG+AGG - Chr4:37691426-37691445 None:intergenic 70.0%
GGTGGCCGTGGAGGAGGAAG+TGG - Chr4:37691402-37691421 None:intergenic 70.0%
TTTGGCGGCGGTGGAGGACG+AGG - Chr4:37691435-37691454 None:intergenic 70.0%
! CCAGCTTTTGGCGGCGGTGG+AGG - Chr4:37691441-37691460 None:intergenic 70.0%
AGGCGGACCAGGGGGTGGAG+GGG - Chr4:37691379-37691398 None:intergenic 75.0%
AGTGGAGGCGGACCAGGGGG+TGG - Chr4:37691384-37691403 None:intergenic 75.0%
GAGGCGGACCAGGGGGTGGA+GGG - Chr4:37691380-37691399 None:intergenic 75.0%
GGCGCAAGAGGAGGTGGCCG+TGG - Chr4:37691414-37691433 None:intergenic 75.0%
TCAGAAGGCGGCGGCGGCTG+TGG - Chr4:37694043-37694062 None:intergenic 75.0%
! GGACCAGGGGGTGGAGGGGC+AGG - Chr4:37691375-37691394 None:intergenic 80.0%
! GGAGGCGGACCAGGGGGTGG+AGG - Chr4:37691381-37691400 None:intergenic 80.0%
! GGCGGCGGCTGTGGTGACCC+TGG - Chr4:37694034-37694053 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 37688786 37694548 37688786 ID=MsG0480020262.01;Name=MsG0480020262.01
Chr4 mRNA 37688786 37694548 37688786 ID=MsG0480020262.01.T01;Parent=MsG0480020262.01;Name=MsG0480020262.01.T01;_AED=0.26;_eAED=0.26;_QI=202|0.83|0.85|1|0.66|0.57|7|260|876
Chr4 exon 37694297 37694548 37694297 ID=MsG0480020262.01.T01:exon:7240;Parent=MsG0480020262.01.T01
Chr4 exon 37693254 37694155 37693254 ID=MsG0480020262.01.T01:exon:7239;Parent=MsG0480020262.01.T01
Chr4 exon 37692569 37692804 37692569 ID=MsG0480020262.01.T01:exon:7238;Parent=MsG0480020262.01.T01
Chr4 exon 37692022 37692215 37692022 ID=MsG0480020262.01.T01:exon:7237;Parent=MsG0480020262.01.T01
Chr4 exon 37691178 37691655 37691178 ID=MsG0480020262.01.T01:exon:7236;Parent=MsG0480020262.01.T01
Chr4 exon 37689936 37690623 37689936 ID=MsG0480020262.01.T01:exon:7235;Parent=MsG0480020262.01.T01
Chr4 exon 37688786 37689128 37688786 ID=MsG0480020262.01.T01:exon:7234;Parent=MsG0480020262.01.T01
Chr4 five_prime_UTR 37688786 37688987 37688786 ID=MsG0480020262.01.T01:five_prime_utr;Parent=MsG0480020262.01.T01
Chr4 CDS 37688988 37689128 37688988 ID=MsG0480020262.01.T01:cds;Parent=MsG0480020262.01.T01
Chr4 CDS 37689936 37690623 37689936 ID=MsG0480020262.01.T01:cds;Parent=MsG0480020262.01.T01
Chr4 CDS 37691178 37691655 37691178 ID=MsG0480020262.01.T01:cds;Parent=MsG0480020262.01.T01
Chr4 CDS 37692022 37692215 37692022 ID=MsG0480020262.01.T01:cds;Parent=MsG0480020262.01.T01
Chr4 CDS 37692569 37692804 37692569 ID=MsG0480020262.01.T01:cds;Parent=MsG0480020262.01.T01
Chr4 CDS 37693254 37694147 37693254 ID=MsG0480020262.01.T01:cds;Parent=MsG0480020262.01.T01
Chr4 three_prime_UTR 37694148 37694155 37694148 ID=MsG0480020262.01.T01:three_prime_utr;Parent=MsG0480020262.01.T01
Chr4 three_prime_UTR 37694297 37694548 37694297 ID=MsG0480020262.01.T01:three_prime_utr;Parent=MsG0480020262.01.T01
Gene Sequence

>MsG0480020262.01.T01

ATGGAATTGACAAGAACCGGTTGTGCGGTTATTTATGTCATCCTCCTTTGTGCTTTGGCTCAAGGGGGCTCAGAGGGGAAGGAAGATGAACTTTGTATAGAAGATGCATCTTTTTTATCTTTCATTATTCATGGAAAACAGTTCCATTCTCTCATTTGGTTGATACAGGCAGAGAATGTGTGGAAACGTTGCAGGAAAGAATTGATAGAGGGGAACAATGATGTGGAAACAAGCAGTGACAAGCTTTATCCTTCAAGATACTTGCTAACCAAACATTCTAGAAACGATCATCATCGTCATCGTCGTCATCATGGAACAAATTCAATCGCCGAGTCACCACGTGATTATTTATCTAATATATCACCAATGTCACCGAGTCCTAGTGCTAATGGTCCATCCCCTAGGCATTCATTGGTATCGCCAATTCATCTATCAACACCAGCAAGTTCTTCATCACCGTCACCTACTCCTGCTCCGAGTACTCATCCACCAACACTGGCAAGTTCTTCGTCACCATCACCTACTCCTGTTCCGAGTACTGGAGTTGAGTTTTTACCACTCACTCCAGATAAGTCTGGGCCGTCTCCACCTCCACCGCATCAACCGGTTAATCCTTTTCAAATTTTTAAACCTATAACAAGTGCTCCAACTCCTTCACCTTCTTTTAACAATCAACACAGAAGGAAGGAAGCAATTATTTTGGCTGCATGTATATCAGGAATCATAATCTTGATAGCATTTGCGCTTTGTTATCGCGAGGCTAAAAGCAGTAAAGTTAAAAAAGATGACGGACCTTTGCTCGTATTAACCTCGAATGATTATGCTGGAGGTCCACATAAGGTTGTCCATTTGGGAAATGCTAATACAGAAGAATCTGGTGTTACTATTAACAAAGGAAAGAATCCATCTATTGTTGAAAATTCGTCGATGAAGGCCGGAGATAATAACAATATATCGGTAGTTGAAACAGCAACAACATCAGGAGAAATGGGAGAACAAATAGCAGGAACTTCTTCCGGAAAACCTGCCCCTCCACCCCCTGGTCCGCCTCCACTTCCTCCTCCACGGCCACCTCCTCTTGCGCCTCGTCCTCCACCGCCGCCAAAAGCTGGTCATCCACCACCTGCTCCTCCCAAGCCAATGGCTGGTAAAAACCAAGTTACGCCTCATGGACCACTAAATCAAGGAAGTTCTGATGAAGGCGGTGATGCTCCAAAGCCTAAACTAAAGCCATTTTTCTGGGACAAGGTTAATGCAAAACCTGATCAATCAATGGTGTGGCATGAGATCAATGCAGGGTCATTTGTGTTCAATGAGGAAATGATGGAGTCTTTATTTGGTACCAACCAGAACAAAACCGAACGTAGAAAAGATTCACCTTCTGTAGATACTTCTGTACAATATATCCAGATTATTGACCCAAAGAAAGCACAGAATTTATCAATTCTTTTGCGTGCTCTGAATGTGACAACAGCAGAAGTTATTGATGCACTTAAAGAAGGTAACGAGATTCCTGCGGAGCTTATCCAAACGTTGTTGAAGATGGCACCGACACAAGAAGAGGAACTGAAACTGAGGTTATTCTCTGGAGAACTATCTCAACTAGGCCCAGCAGAGAGGTTTCTCAAAGTATTGGTTGACATTCCATTCGCTTTCAAACGTCTTGAAACTCTCATGTTCATGTTTATTCTTCGAGAAGAGGCCTCGAGCATCAGGGAATCTTTCGCAACTTTAGAGGTTGCTTGTGAAGAACTGAGAAAAAGCAGGCTGTTCTTAAAACTACTTGAAGCAGTACTCAAAACCGGAAACCGCATGAACGATGGAACCTACCGTGGAGGCGCTCAAGCATTCAGACTCGACACACTTTTAAAACTTTCCGACGTAAAAGGAACAGACGGAAAGACAACGCTATTACACTTCGTGGTTCAAGAAATTATACGTTCAGAAGGAATAAGAGCAGTGAGAACCGAAAGAGCAAGCAGAAGCGTTTCAAGCATAGGAACAGTGGATGTCGATTATGAAAACGAAGATTCAGAAGAACACTATCGTAGCCTTGGACTTCAAGTAGTTTCAAGCTTAAGCAATGAACTTGAAGATGTTAAAAAAGCAGCATTAATAGACGGTGATGCATTGAGTAGCGCGGTTTCAAAACTCGGTCACTCGTTGATTAAGACTCAGGAGTTTTTGAACACTGATCTTAAGAATTTGGAAGAAGACAGTGAGTTTCAAAGTTGTGTAGAAAAGTTTATGGAACATGCGAAAGGTGAGGTGACGTGGCTTGTTGAGGAAGAAAAGAAGATAATGTTGTTGGTTAAGAGTACGGCGGATTATTTTCATGGGAATGCAGGGAAAGATGAAGGGTTGCGTTTGTTTTTGATTGTGCGTGACTTCTTGATAATATTGGATAAGGTTTGTAAAGAGGTTAAAGAAGCTGCATTGAAGTCTGTGAAGGGTTCTTGGAAGAAAGAGGCTCCGTCAGTGGTGGTGCCATCTTCTCCGGATACAAGTCATCATCCAGGGTCACCACAGCCGCCGCCGCCTTCTGATCTTCATAGGCGATTGTTTCCGGCTATTGCGGATCGAAGAGTAGATTATTCTAGCTCTGATGATGATGATGAGGATAACTTTTAG
Protein sequence

>MsG0480020262.01.T01

MELTRTGCAVIYVILLCALAQGGSEGKEDELCIEDASFLSFIIHGKQFHSLIWLIQAENVWKRCRKELIEGNNDVETSSDKLYPSRYLLTKHSRNDHHRHRRHHGTNSIAESPRDYLSNISPMSPSPSANGPSPRHSLVSPIHLSTPASSSSPSPTPAPSTHPPTLASSSSPSPTPVPSTGVEFLPLTPDKSGPSPPPPHQPVNPFQIFKPITSAPTPSPSFNNQHRRKEAIILAACISGIIILIAFALCYREAKSSKVKKDDGPLLVLTSNDYAGGPHKVVHLGNANTEESGVTINKGKNPSIVENSSMKAGDNNNISVVETATTSGEMGEQIAGTSSGKPAPPPPGPPPLPPPRPPPLAPRPPPPPKAGHPPPAPPKPMAGKNQVTPHGPLNQGSSDEGGDAPKPKLKPFFWDKVNAKPDQSMVWHEINAGSFVFNEEMMESLFGTNQNKTERRKDSPSVDTSVQYIQIIDPKKAQNLSILLRALNVTTAEVIDALKEGNEIPAELIQTLLKMAPTQEEELKLRLFSGELSQLGPAERFLKVLVDIPFAFKRLETLMFMFILREEASSIRESFATLEVACEELRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRTERASRSVSSIGTVDVDYENEDSEEHYRSLGLQVVSSLSNELEDVKKAALIDGDALSSAVSKLGHSLIKTQEFLNTDLKNLEEDSEFQSCVEKFMEHAKGEVTWLVEEEKKIMLLVKSTADYFHGNAGKDEGLRLFLIVRDFLIILDKVCKEVKEAALKSVKGSWKKEAPSVVVPSSPDTSHHPGSPQPPPPSDLHRRLFPAIADRRVDYSSSDDDDEDNF*