AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020508.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020508.01.T01 MTR_4g052620 96.935 261 8 0 1 261 1 261 0.0 527
MsG0480020508.01.T01 MTR_2g086690 61.303 261 78 7 6 260 5 248 3.32e-106 308
MsG0480020508.01.T01 MTR_7g105170 46.296 270 113 8 3 260 2 251 9.53e-77 233
MsG0480020508.01.T01 MTR_5g012080 34.583 240 135 8 6 240 8 230 3.76e-40 142
MsG0480020508.01.T01 MTR_2g064090 38.350 206 115 6 4 209 5 198 2.65e-39 140
MsG0480020508.01.T01 MTR_5g041940 44.586 157 80 4 5 160 3 153 5.13e-39 137
MsG0480020508.01.T01 MTR_4g075980 41.011 178 90 5 7 182 17 181 6.09e-39 137
MsG0480020508.01.T01 MTR_1g096430 44.375 160 81 4 1 160 3 154 6.17e-39 139
MsG0480020508.01.T01 MTR_6g011860 38.710 186 102 4 3 182 13 192 5.92e-38 137
MsG0480020508.01.T01 MTR_4g134460 43.558 163 82 3 2 164 51 203 6.64e-38 138
MsG0480020508.01.T01 MTR_4g036030 44.937 158 73 6 6 160 8 154 9.34e-38 135
MsG0480020508.01.T01 MTR_2g093810 46.250 160 75 5 4 159 13 165 9.66e-38 135
MsG0480020508.01.T01 MTR_5g076850 43.590 156 81 4 4 159 5 153 1.60e-37 139
MsG0480020508.01.T01 MTR_6g477900 43.125 160 84 4 5 164 6 158 2.44e-37 132
MsG0480020508.01.T01 MTR_4g081870 43.312 157 82 4 5 160 9 159 2.74e-37 132
MsG0480020508.01.T01 MTR_8g076110 43.275 171 83 6 1 168 2 161 4.88e-37 133
MsG0480020508.01.T01 MTR_8g059170 42.767 159 80 5 4 160 13 162 1.32e-36 132
MsG0480020508.01.T01 MTR_5g021710 43.558 163 78 5 1 160 4 155 1.57e-36 132
MsG0480020508.01.T01 MTR_3g096920 40.237 169 94 3 2 170 4 165 1.59e-36 131
MsG0480020508.01.T01 MTR_8g094580 34.842 221 126 7 5 218 7 216 3.91e-36 130
MsG0480020508.01.T01 MTR_3g064580 35.268 224 120 7 4 227 5 203 4.96e-36 135
MsG0480020508.01.T01 MTR_8g467490 39.521 167 89 4 1 160 10 171 9.26e-36 131
MsG0480020508.01.T01 MTR_3g088110 41.916 167 86 4 2 166 4 161 1.44e-35 129
MsG0480020508.01.T01 MTR_3g116070 47.407 135 66 2 2 135 20 150 3.04e-35 129
MsG0480020508.01.T01 MTR_2g062730 37.566 189 102 6 2 187 7 182 3.18e-35 129
MsG0480020508.01.T01 MTR_7g100990 40.102 197 103 7 2 191 8 196 6.69e-35 128
MsG0480020508.01.T01 MTR_1g008740 34.842 221 131 6 2 220 10 219 7.39e-35 128
MsG0480020508.01.T01 MTR_1g008740 34.842 221 131 6 2 220 24 233 8.37e-35 128
MsG0480020508.01.T01 MTR_4g089135 38.725 204 93 7 5 185 15 209 1.14e-34 127
MsG0480020508.01.T01 MTR_3g109340 40.237 169 91 4 2 169 19 178 1.17e-34 128
MsG0480020508.01.T01 MTR_3g109340 40.237 169 90 4 2 169 19 177 1.54e-34 127
MsG0480020508.01.T01 MTR_6g012670 40.936 171 92 5 5 174 20 182 2.84e-34 126
MsG0480020508.01.T01 MTR_2157s0010 39.326 178 91 5 5 172 8 178 3.69e-34 124
MsG0480020508.01.T01 MTR_4g101680 36.842 190 90 7 6 191 8 171 3.74e-34 126
MsG0480020508.01.T01 MTR_6g084430 41.875 160 82 6 1 160 1 149 3.96e-34 125
MsG0480020508.01.T01 MTR_7g085220 39.412 170 85 5 2 160 5 167 4.63e-34 125
MsG0480020508.01.T01 MTR_2g079990 42.138 159 79 6 4 160 15 162 5.20e-34 126
MsG0480020508.01.T01 MTR_2g080010 39.791 191 89 8 5 182 15 192 1.27e-33 125
MsG0480020508.01.T01 MTR_2g078700 46.970 132 64 3 5 135 23 149 1.43e-33 125
MsG0480020508.01.T01 MTR_5g040420 44.118 136 70 3 1 135 10 140 1.65e-33 125
MsG0480020508.01.T01 MTR_8g024480 37.634 186 101 6 6 182 16 195 2.63e-33 125
MsG0480020508.01.T01 MTR_5g014300 43.210 162 77 5 4 159 5 157 4.81e-33 123
MsG0480020508.01.T01 MTR_8g023840 44.231 156 73 5 6 159 12 155 8.38e-33 124
MsG0480020508.01.T01 MTR_3g070030 41.401 157 84 4 5 160 19 168 1.01e-32 122
MsG0480020508.01.T01 MTR_3g096920 43.662 142 73 3 2 143 4 138 1.47e-32 122
MsG0480020508.01.T01 MTR_3g435150 41.875 160 80 5 4 160 15 164 1.83e-32 120
MsG0480020508.01.T01 MTR_2g068920 35.747 221 115 9 2 209 17 223 2.59e-32 120
MsG0480020508.01.T01 MTR_2g079990 42.953 149 74 5 4 150 15 154 3.67e-32 122
MsG0480020508.01.T01 MTR_2g068880 39.894 188 93 9 2 174 18 200 3.67e-32 120
MsG0480020508.01.T01 MTR_1g069805 38.750 160 81 5 4 160 9 154 4.00e-32 119
MsG0480020508.01.T01 MTR_2g086880 48.438 128 61 4 7 134 20 142 5.17e-32 124
MsG0480020508.01.T01 MTR_2g086880 48.438 128 61 4 7 134 20 142 5.32e-32 123
MsG0480020508.01.T01 MTR_8g023860 39.873 158 83 4 3 159 10 156 7.50e-32 121
MsG0480020508.01.T01 MTR_4g098630 41.772 158 84 5 4 159 5 156 8.87e-32 119
MsG0480020508.01.T01 MTR_4g108760 40.881 159 81 5 5 160 17 165 9.68e-32 120
MsG0480020508.01.T01 MTR_5g069030 42.038 157 82 5 5 160 25 173 1.40e-31 122
MsG0480020508.01.T01 MTR_3g096140 39.610 154 86 5 7 160 9 155 3.81e-31 117
MsG0480020508.01.T01 MTR_4g035590 40.000 165 84 5 6 167 9 161 3.92e-31 118
MsG0480020508.01.T01 MTR_7g097090 38.750 160 81 5 4 160 9 154 4.15e-31 117
MsG0480020508.01.T01 MTR_3g093040 39.241 158 87 5 4 160 107 256 5.40e-31 117
MsG0480020508.01.T01 MTR_8g099750 40.625 160 85 4 5 161 14 166 7.20e-31 114
MsG0480020508.01.T01 MTR_8g023900 40.000 165 82 5 1 159 184 337 1.08e-30 119
MsG0480020508.01.T01 MTR_8g023900 40.000 160 86 5 1 159 8 158 3.12e-29 115
MsG0480020508.01.T01 MTR_3g093050 40.252 159 86 5 3 160 20 170 1.37e-30 120
MsG0480020508.01.T01 MTR_7g011130 45.038 131 66 3 5 135 19 143 1.67e-30 117
MsG0480020508.01.T01 MTR_3g096140 39.241 158 89 5 7 164 9 159 1.87e-30 116
MsG0480020508.01.T01 MTR_0036s0150 40.881 159 87 4 7 165 7 158 1.96e-30 119
MsG0480020508.01.T01 MTR_1g090723 38.365 159 91 3 7 165 10 161 2.04e-30 119
MsG0480020508.01.T01 MTR_3g093050 40.252 159 86 5 3 160 20 170 2.19e-30 119
MsG0480020508.01.T01 MTR_1g090723 38.365 159 91 3 7 165 10 161 2.30e-30 119
MsG0480020508.01.T01 MTR_7g011120 38.095 168 95 4 5 172 8 166 3.55e-30 115
MsG0480020508.01.T01 MTR_7g005280 39.873 158 81 5 5 161 15 159 3.91e-30 113
MsG0480020508.01.T01 MTR_2g064470 39.264 163 83 6 1 160 7 156 4.50e-30 114
MsG0480020508.01.T01 MTR_8g023930 39.873 158 83 4 3 159 22 168 5.02e-30 117
MsG0480020508.01.T01 MTR_1g090720 40.625 160 88 4 4 160 41 196 6.45e-30 117
MsG0480020508.01.T01 MTR_1g090723 37.736 159 93 3 7 165 10 162 8.28e-30 117
MsG0480020508.01.T01 MTR_6g032770 44.361 133 66 4 5 135 18 144 1.87e-29 114
MsG0480020508.01.T01 MTR_5g090970 40.000 175 83 8 7 169 20 184 1.30e-28 110
MsG0480020508.01.T01 MTR_7g085260 41.045 134 71 3 5 135 17 145 4.80e-28 110
MsG0480020508.01.T01 MTR_5g090970 39.205 176 84 8 7 169 20 185 5.55e-28 109
MsG0480020508.01.T01 MTR_3g098810 40.964 166 77 7 5 160 14 168 2.34e-27 105
MsG0480020508.01.T01 MTR_8g063550 35.714 154 92 4 7 160 8 154 2.31e-26 107
MsG0480020508.01.T01 MTR_3g098810 42.657 143 70 5 5 143 14 148 2.47e-26 101
MsG0480020508.01.T01 MTR_8g063550 35.714 154 92 4 7 160 8 154 2.52e-26 105
MsG0480020508.01.T01 MTR_8g063550 36.076 158 86 5 7 160 8 154 4.05e-26 106
MsG0480020508.01.T01 MTR_1g097300 44.961 129 65 4 7 134 21 144 4.69e-26 107
MsG0480020508.01.T01 MTR_3g070040 39.623 159 82 6 5 160 8 155 2.93e-25 102
MsG0480020508.01.T01 MTR_8g093580 35.443 158 95 5 7 164 8 158 1.69e-24 102
MsG0480020508.01.T01 MTR_8g023880 36.047 172 78 7 4 159 6 161 2.92e-24 98.6
MsG0480020508.01.T01 MTR_3g096140 36.111 144 85 5 21 164 2 138 6.65e-23 95.9
MsG0480020508.01.T01 MTR_8g094580 33.129 163 96 5 63 218 6 162 2.38e-22 92.4
MsG0480020508.01.T01 MTR_4g094302 36.875 160 84 5 5 160 11 157 5.41e-22 90.5
MsG0480020508.01.T01 MTR_4g094302 40.909 132 64 4 5 135 11 129 1.55e-21 88.6
MsG0480020508.01.T01 MTR_3g096400 30.994 171 99 4 1 162 1 161 4.40e-17 77.8
MsG0480020508.01.T01 MTR_7g070140 38.372 86 52 1 51 135 5 90 2.90e-14 68.6
MsG0480020508.01.T01 MTR_8g093790 32.692 156 76 8 5 160 10 136 1.26e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020508.01.T01 AT5G22380 55.794 233 95 4 1 231 1 227 6.21e-83 248
MsG0480020508.01.T01 AT3G44350 50.000 262 109 6 1 261 1 241 2.20e-82 247
MsG0480020508.01.T01 AT3G44350 57.764 161 66 1 1 161 1 159 8.97e-65 199
MsG0480020508.01.T01 AT2G17040 36.652 221 115 7 2 214 3 206 1.53e-40 141
MsG0480020508.01.T01 AT1G71930 41.573 178 86 5 1 178 5 164 3.09e-39 139
MsG0480020508.01.T01 AT1G71930 41.573 178 86 5 1 178 5 164 3.09e-39 139
MsG0480020508.01.T01 AT4G17980 45.223 157 81 5 4 159 5 157 4.47e-39 137
MsG0480020508.01.T01 AT4G17980 45.223 157 81 5 4 159 5 157 7.13e-39 137
MsG0480020508.01.T01 AT1G69490 40.588 170 94 4 2 170 6 169 3.73e-38 135
MsG0480020508.01.T01 AT2G02450 43.506 154 77 3 7 160 53 196 8.05e-38 137
MsG0480020508.01.T01 AT2G02450 43.506 154 77 3 7 160 53 196 9.56e-38 137
MsG0480020508.01.T01 AT1G65910 43.312 157 82 4 4 160 5 154 1.81e-37 139
MsG0480020508.01.T01 AT5G66300 31.429 280 147 10 4 253 11 275 3.94e-37 133
MsG0480020508.01.T01 AT3G17730 41.875 160 86 4 5 164 6 158 1.16e-36 130
MsG0480020508.01.T01 AT1G76420 43.030 165 82 5 2 164 19 173 1.37e-36 132
MsG0480020508.01.T01 AT4G36160 41.954 174 78 6 4 174 9 162 1.41e-36 133
MsG0480020508.01.T01 AT4G36160 41.954 174 78 6 4 174 9 162 1.41e-36 133
MsG0480020508.01.T01 AT4G36160 41.954 174 78 6 4 174 13 166 1.51e-36 133
MsG0480020508.01.T01 AT4G27410 42.767 159 78 5 4 160 13 160 1.61e-36 131
MsG0480020508.01.T01 AT5G17260 42.038 157 85 4 4 160 5 155 2.09e-36 134
MsG0480020508.01.T01 AT5G46590 43.226 155 83 4 5 159 6 155 4.75e-36 130
MsG0480020508.01.T01 AT2G18060 43.125 160 77 5 4 160 8 156 5.13e-36 131
MsG0480020508.01.T01 AT2G18060 43.125 160 77 5 4 160 8 156 5.13e-36 131
MsG0480020508.01.T01 AT1G26870 47.794 136 65 3 1 135 12 142 7.88e-36 132
MsG0480020508.01.T01 AT1G01720 43.902 164 80 5 5 165 7 161 8.65e-36 129
MsG0480020508.01.T01 AT1G33060 43.038 158 83 4 3 160 22 172 1.52e-35 134
MsG0480020508.01.T01 AT1G33060 43.038 158 83 4 3 160 22 172 1.68e-35 134
MsG0480020508.01.T01 AT4G35580 44.304 158 81 5 3 160 7 157 2.61e-35 132
MsG0480020508.01.T01 AT5G62380 40.385 156 85 4 5 160 7 154 2.69e-35 129
MsG0480020508.01.T01 AT5G62380 40.385 156 85 4 5 160 7 154 2.69e-35 129
MsG0480020508.01.T01 AT4G35580 44.304 158 81 5 3 160 7 157 2.85e-35 132
MsG0480020508.01.T01 AT4G35580 44.304 158 81 5 3 160 7 157 2.90e-35 132
MsG0480020508.01.T01 AT3G15500 42.767 159 78 5 4 160 13 160 3.59e-35 128
MsG0480020508.01.T01 AT1G12260 43.671 158 75 6 6 160 8 154 4.35e-35 129
MsG0480020508.01.T01 AT2G24430 41.875 160 83 5 2 160 13 163 4.98e-35 128
MsG0480020508.01.T01 AT2G24430 41.875 160 83 5 2 160 13 163 4.98e-35 128
MsG0480020508.01.T01 AT4G27410 40.588 170 83 6 4 160 13 177 5.71e-35 127
MsG0480020508.01.T01 AT1G12260 43.671 158 75 6 6 160 8 154 7.90e-35 129
MsG0480020508.01.T01 AT1G61110 40.642 187 91 6 5 179 16 194 7.98e-35 127
MsG0480020508.01.T01 AT5G24590 36.923 195 106 5 4 187 12 200 8.71e-35 130
MsG0480020508.01.T01 AT1G79580 40.828 169 86 4 4 169 16 173 9.99e-35 128
MsG0480020508.01.T01 AT1G79580 40.828 169 86 4 4 169 16 173 9.99e-35 128
MsG0480020508.01.T01 AT1G79580 40.828 169 86 4 4 169 16 173 9.99e-35 128
MsG0480020508.01.T01 AT1G79580 40.828 169 86 4 4 169 16 173 9.99e-35 128
MsG0480020508.01.T01 AT1G79580 40.828 169 86 4 4 169 16 173 9.99e-35 128
MsG0480020508.01.T01 AT3G03200 37.681 207 111 7 4 208 5 195 1.18e-34 130
MsG0480020508.01.T01 AT5G39820 41.892 148 80 3 2 148 17 159 1.25e-34 127
MsG0480020508.01.T01 AT1G52890 42.138 159 79 5 4 160 13 160 1.46e-34 127
MsG0480020508.01.T01 AT1G62700 42.405 158 77 6 6 160 8 154 1.86e-34 128
MsG0480020508.01.T01 AT1G62700 42.405 158 77 6 6 160 8 154 1.86e-34 128
MsG0480020508.01.T01 AT5G08790 39.785 186 98 6 2 181 4 181 9.28e-34 124
MsG0480020508.01.T01 AT1G77450 41.772 158 81 4 5 160 10 158 9.42e-34 123
MsG0480020508.01.T01 AT3G18400 40.000 160 86 4 1 160 1 150 9.77e-34 124
MsG0480020508.01.T01 AT5G61430 41.509 159 80 5 5 160 16 164 2.09e-33 124
MsG0480020508.01.T01 AT3G10480 40.764 157 87 4 4 160 26 176 2.10e-33 126
MsG0480020508.01.T01 AT3G61910 44.776 134 65 4 5 135 11 138 2.23e-33 124
MsG0480020508.01.T01 AT5G46590 46.565 131 67 3 5 135 6 133 3.32e-33 122
MsG0480020508.01.T01 AT1G54330 40.764 157 83 4 4 160 5 151 3.35e-33 122
MsG0480020508.01.T01 AT1G56010 39.375 160 92 3 1 160 15 169 5.13e-33 123
MsG0480020508.01.T01 AT3G10480 40.764 157 86 4 4 160 26 175 5.81e-33 125
MsG0480020508.01.T01 AT2G46770 45.522 134 64 4 5 135 16 143 7.33e-33 123
MsG0480020508.01.T01 AT3G10490 40.764 157 87 4 4 160 26 176 7.43e-33 120
MsG0480020508.01.T01 AT3G15170 40.244 164 91 4 2 164 17 174 8.98e-33 122
MsG0480020508.01.T01 AT3G04070 41.071 168 80 7 4 160 9 168 1.32e-32 122
MsG0480020508.01.T01 AT5G63790 39.412 170 94 4 2 169 47 209 2.12e-32 121
MsG0480020508.01.T01 AT5G63790 39.412 170 94 4 2 169 57 219 3.18e-32 120
MsG0480020508.01.T01 AT1G32510 39.130 161 87 5 5 159 6 161 4.00e-32 119
MsG0480020508.01.T01 AT3G49530 38.608 158 91 4 3 160 11 162 5.08e-32 122
MsG0480020508.01.T01 AT4G10350 38.333 180 97 6 6 181 10 179 5.09e-32 120
MsG0480020508.01.T01 AT1G32770 45.865 133 63 4 6 135 17 143 7.38e-32 120
MsG0480020508.01.T01 AT5G39610 40.881 159 81 5 5 160 20 168 1.20e-31 118
MsG0480020508.01.T01 AT3G10500 40.123 162 90 4 4 165 8 162 1.26e-31 122
MsG0480020508.01.T01 AT3G49530 38.608 158 91 4 3 160 11 162 1.37e-31 121
MsG0480020508.01.T01 AT3G29035 42.500 160 77 6 5 160 24 172 1.57e-31 119
MsG0480020508.01.T01 AT3G12910 41.624 197 94 9 7 190 23 211 1.85e-31 118
MsG0480020508.01.T01 AT5G07680 39.623 159 83 5 5 160 17 165 2.35e-31 118
MsG0480020508.01.T01 AT3G04070 43.478 138 65 4 4 135 9 139 2.55e-31 119
MsG0480020508.01.T01 AT5G07680 39.623 159 83 5 5 160 3 151 2.77e-31 118
MsG0480020508.01.T01 AT5G53950 47.368 133 62 4 5 135 17 143 3.66e-31 119
MsG0480020508.01.T01 AT3G10490 40.127 157 88 4 4 160 26 176 3.72e-31 120
MsG0480020508.01.T01 AT3G15510 40.571 175 82 7 9 170 21 186 4.94e-31 118
MsG0480020508.01.T01 AT1G33280 38.650 163 91 4 6 168 9 162 6.75e-31 117
MsG0480020508.01.T01 AT5G18270 37.158 183 103 6 5 182 21 196 1.82e-30 116
MsG0480020508.01.T01 AT3G12977 38.889 162 87 6 1 160 14 165 2.29e-30 115
MsG0480020508.01.T01 AT5G18270 37.158 183 103 6 5 182 21 196 3.64e-30 115
MsG0480020508.01.T01 AT3G04060 38.889 162 81 5 5 160 20 169 3.96e-30 115
MsG0480020508.01.T01 AT5G13180 41.772 158 79 5 5 161 14 159 5.95e-30 113
MsG0480020508.01.T01 AT5G04410 38.889 162 92 5 4 165 8 162 1.36e-29 117
MsG0480020508.01.T01 AT3G44290 41.781 146 79 5 7 152 16 155 3.26e-29 110
MsG0480020508.01.T01 AT1G34180 37.736 159 92 4 7 165 18 169 6.54e-29 114
MsG0480020508.01.T01 AT2G33480 40.764 157 81 5 5 161 15 159 6.90e-29 110
MsG0480020508.01.T01 AT5G04395 41.379 145 71 5 2 134 25 167 7.44e-29 108
MsG0480020508.01.T01 AT5G22290 40.940 149 83 4 4 152 20 163 8.49e-29 112
MsG0480020508.01.T01 AT2G33480 39.490 157 81 4 5 161 15 157 9.45e-29 110
MsG0480020508.01.T01 AT2G43000 36.723 177 102 5 7 182 20 187 1.45e-28 110
MsG0480020508.01.T01 AT1G34180 43.750 128 68 3 7 134 18 141 1.71e-28 114
MsG0480020508.01.T01 AT3G10480 35.450 189 85 5 4 160 26 209 1.74e-28 113
MsG0480020508.01.T01 AT4G01550 38.312 154 83 3 8 159 7 150 1.85e-28 112
MsG0480020508.01.T01 AT3G44290 41.781 146 79 5 7 152 16 155 2.38e-28 110
MsG0480020508.01.T01 AT4G28530 35.754 179 74 6 5 160 10 170 7.88e-28 109
MsG0480020508.01.T01 AT2G27300 39.726 146 82 4 7 152 16 155 1.41e-27 108
MsG0480020508.01.T01 AT1G34190 42.969 128 69 3 7 134 18 141 1.59e-27 111
MsG0480020508.01.T01 AT5G09330 43.411 129 69 3 7 135 8 132 5.22e-27 109
MsG0480020508.01.T01 AT5G09330 43.411 129 69 3 7 135 8 132 5.22e-27 109
MsG0480020508.01.T01 AT5G09330 43.411 129 69 3 7 135 8 132 5.22e-27 109
MsG0480020508.01.T01 AT5G09330 43.411 129 69 3 7 135 8 132 5.22e-27 109
MsG0480020508.01.T01 AT5G09330 43.411 129 69 3 7 135 8 132 5.22e-27 109
MsG0480020508.01.T01 AT1G34180 34.911 169 95 4 7 165 18 181 2.68e-26 107
MsG0480020508.01.T01 AT5G64060 38.037 163 84 7 7 164 8 158 6.07e-26 104
MsG0480020508.01.T01 AT1G34180 39.855 138 71 3 7 134 18 153 6.22e-26 106
MsG0480020508.01.T01 AT4G01520 37.580 157 85 5 6 159 5 151 1.00e-25 103
MsG0480020508.01.T01 AT4G01540 38.065 155 83 5 8 159 7 151 1.24e-24 101
MsG0480020508.01.T01 AT3G04420 36.129 155 87 4 6 159 4 147 1.44e-24 99.8
MsG0480020508.01.T01 AT4G01540 38.065 155 83 5 8 159 7 151 2.31e-24 101
MsG0480020508.01.T01 AT4G01540 38.065 155 83 5 8 159 7 151 2.66e-24 100
MsG0480020508.01.T01 AT4G01540 38.065 155 83 5 8 159 7 151 3.88e-24 100
MsG0480020508.01.T01 AT3G04420 36.129 155 87 4 6 159 4 147 3.91e-24 99.8
MsG0480020508.01.T01 AT1G52880 38.889 162 82 5 9 160 21 175 7.01e-24 98.6
MsG0480020508.01.T01 AT1G32870 36.646 161 95 5 5 165 10 163 1.02e-22 97.4
MsG0480020508.01.T01 AT1G32870 36.646 161 95 5 5 165 10 163 1.05e-22 97.1
MsG0480020508.01.T01 AT1G32870 36.646 161 95 5 5 165 46 199 1.67e-22 96.7
MsG0480020508.01.T01 AT1G02250 35.032 157 87 5 6 159 4 148 2.90e-22 94.7
MsG0480020508.01.T01 AT1G02230 35.669 157 86 5 6 159 4 148 1.04e-21 93.2
MsG0480020508.01.T01 AT1G56010 41.237 97 56 1 64 160 7 102 3.09e-19 84.7
MsG0480020508.01.T01 AT3G12977 40.000 105 58 3 57 160 12 112 8.44e-19 82.8
MsG0480020508.01.T01 AT5G64530 40.152 132 59 7 5 134 3 116 1.16e-18 81.6
MsG0480020508.01.T01 AT5G64530 39.695 131 61 7 5 134 3 116 1.19e-18 80.9
MsG0480020508.01.T01 AT5G61430 38.679 106 57 3 58 160 1 101 6.18e-18 81.6
MsG0480020508.01.T01 AT1G02220 26.054 261 155 11 6 255 4 237 7.99e-18 82.4
MsG0480020508.01.T01 AT1G01010 32.335 167 91 6 1 159 1 153 9.41e-18 82.4
MsG0480020508.01.T01 AT4G10350 36.667 120 70 3 63 181 18 132 4.89e-17 79.3
MsG0480020508.01.T01 AT4G28530 38.739 111 39 3 5 95 10 111 3.74e-16 77.0
MsG0480020508.01.T01 AT2G33480 41.237 97 53 3 65 161 10 102 1.05e-15 74.3
MsG0480020508.01.T01 AT3G04430 36.364 110 66 2 11 120 6 111 1.84e-14 70.5
MsG0480020508.01.T01 AT5G50820 31.056 161 95 5 5 162 17 164 9.50e-14 68.6
MsG0480020508.01.T01 AT3G56530 29.560 159 102 7 4 161 51 200 1.85e-13 69.3
MsG0480020508.01.T01 AT2G43000 38.835 103 58 3 81 182 11 109 1.43e-12 65.1
MsG0480020508.01.T01 AT3G10490 41.026 78 43 2 83 160 2 76 1.74e-12 67.0
MsG0480020508.01.T01 AT3G10490 41.026 78 43 2 83 160 2 76 1.74e-12 67.0
MsG0480020508.01.T01 AT2G18060 42.466 73 36 2 88 160 2 68 5.11e-12 64.7
MsG0480020508.01.T01 AT5G14000 31.061 132 81 5 5 134 15 138 2.28e-11 60.8
MsG0480020508.01.T01 AT5G14000 28.221 163 101 5 5 165 15 163 4.65e-11 61.2

Find 71 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTGAAATTTCTCAATT+AGG 0.161327 4:-42639874 MsG0480020508.01.T01:CDS
TCTTCGGATAACAAAGTTAT+TGG 0.171109 4:-42640816 MsG0480020508.01.T01:CDS
CATTTGAAATTTCTCAATTA+GGG 0.213508 4:-42639873 MsG0480020508.01.T01:CDS
CCCATTCCCATAGTGATTCT+TGG 0.233146 4:+42639746 None:intergenic
CTTCGGATAACAAAGTTATT+GGG 0.268350 4:-42640815 MsG0480020508.01.T01:CDS
GAGAAAGAGTTGATCAATTA+CGG 0.316679 4:-42639957 MsG0480020508.01.T01:CDS
TTCAATTCCAAGAATCACTA+TGG 0.318489 4:-42639753 MsG0480020508.01.T01:CDS
AAAACCATGGTGTTCTATAA+AGG 0.328853 4:-42640786 MsG0480020508.01.T01:CDS
TCAACTCTTTCTCTCTCTAA+TGG 0.337247 4:+42639967 None:intergenic
TCCTGGTTATGTTTATTCTT+CGG 0.357166 4:-42640832 MsG0480020508.01.T01:CDS
AATAGTAACAATGAAAATAA+TGG 0.367657 4:-42639784 MsG0480020508.01.T01:CDS
GAACTACTGCTTGTGGGTAT+TGG 0.373733 4:-42640869 MsG0480020508.01.T01:CDS
GTGTCGAGTGTATGTAATAT+CGG 0.375874 4:-42640016 MsG0480020508.01.T01:CDS
CCACAAGCAGTAGTTCTATT+AGG 0.380796 4:+42640876 None:intergenic
CAAGTGGAAGGAAAACAAAA+TGG 0.388513 4:-42640755 MsG0480020508.01.T01:CDS
GCCAAACAAGTGCTATAGAT+AGG 0.402516 4:-42641260 MsG0480020508.01.T01:CDS
ACCATTGCTCTTTATCTTCG+CGG 0.411304 4:+42640943 None:intergenic
CCCTATCTATAGCACTTGTT+TGG 0.413662 4:+42641259 None:intergenic
CTTGCTTCTCTCTCTTGACC+TGG 0.421832 4:+42640909 None:intergenic
GAGATTGATCAAAATCCATT+TGG 0.424069 4:-42639928 MsG0480020508.01.T01:CDS
AGAAAGAGTTGATCAATTAC+GGG 0.452891 4:-42639956 MsG0480020508.01.T01:CDS
TGTGGGTATTGGAAGGCAAC+AGG 0.456765 4:-42640858 MsG0480020508.01.T01:CDS
ATTCCAGTCATTGACATCAA+TGG 0.463355 4:-42641234 MsG0480020508.01.T01:CDS
TATCTAAATAATAAATTACA+AGG 0.468522 4:-42641282 MsG0480020508.01.T01:CDS
CTAGTGGCATATGATTACTT+TGG 0.471161 4:+42639845 None:intergenic
TGGTGCCACATCTACTCATC+AGG 0.471854 4:-42639908 MsG0480020508.01.T01:CDS
TACTTACTTGGGAGGTTCCA+TGG 0.472632 4:+42641204 None:intergenic
TCCAAGAATCACTATGGGAA+TGG 0.475257 4:-42639747 MsG0480020508.01.T01:CDS
GAGGTTCAAATAGCACAAAT+TGG 0.477207 4:-42639813 MsG0480020508.01.T01:CDS
CCAAGAATCACTATGGGAAT+GGG 0.486561 4:-42639746 MsG0480020508.01.T01:CDS
CTAACAAGCTCTTCTTCAGT+TGG 0.487944 4:+42641309 None:intergenic
TAACAAGCTCTTCTTCAGTT+GGG 0.488303 4:+42641310 None:intergenic
TGGAAGGCAACAGGTTCTCC+TGG 0.494297 4:-42640849 MsG0480020508.01.T01:CDS
CTAATAGAACTACTGCTTGT+GGG 0.501976 4:-42640875 MsG0480020508.01.T01:CDS
TGAGTAGATGTGGCACCAAA+TGG 0.509329 4:+42639913 None:intergenic
CATATGCCACTAGAGGTTGT+AGG 0.515500 4:-42639835 MsG0480020508.01.T01:CDS
AGGTCAAGAGAGAGAAGCAA+GGG 0.520943 4:-42640907 MsG0480020508.01.T01:CDS
GAGGTGTGGCAGTGTTGGAT+TGG 0.521829 4:+42640697 None:intergenic
TGTCGAGTGTATGTAATATC+GGG 0.527035 4:-42640015 MsG0480020508.01.T01:CDS
GGATTGGTTAGATACTTGAA+TGG 0.527741 4:+42640713 None:intergenic
CCAAACAAGTGCTATAGATA+GGG 0.540158 4:-42641259 MsG0480020508.01.T01:CDS
AAGAGAGAGAAGCAAGGGGA+GGG 0.540485 4:-42640902 MsG0480020508.01.T01:CDS
TATTAATGTACTTACTTGGG+AGG 0.544087 4:+42641196 None:intergenic
TACCTGAGGTGTGGCAGTGT+TGG 0.546731 4:+42640692 None:intergenic
ACACCATTGATGTCAATGAC+TGG 0.555788 4:+42641231 None:intergenic
ATCCAACACTGCCACACCTC+AGG 0.560321 4:-42640694 MsG0480020508.01.T01:intron
TTTGAAATTTCTCAATTAGG+GGG 0.567316 4:-42639871 MsG0480020508.01.T01:CDS
TTCGGATAACAAAGTTATTG+GGG 0.568678 4:-42640814 MsG0480020508.01.T01:CDS
CAATGAAAATAATGGTGATG+AGG 0.574582 4:-42639776 MsG0480020508.01.T01:CDS
CAAGAGAGAGAAGCAAGGGG+AGG 0.575212 4:-42640903 MsG0480020508.01.T01:CDS
AAGGAAAAGCTCCAAGTGGA+AGG 0.577529 4:-42640767 MsG0480020508.01.T01:CDS
CCTAATAGAACTACTGCTTG+TGG 0.583756 4:-42640876 MsG0480020508.01.T01:CDS
ATGGAAGATACCTTCCCACC+TGG 0.589454 4:-42641345 MsG0480020508.01.T01:CDS
ATTTGAAATTTCTCAATTAG+GGG 0.591470 4:-42639872 MsG0480020508.01.T01:CDS
TCCGAAGAATAAACATAACC+AGG 0.594367 4:+42640831 None:intergenic
TACTGCTTGTGGGTATTGGA+AGG 0.594408 4:-42640865 MsG0480020508.01.T01:CDS
TCAATTCCAAGAATCACTAT+GGG 0.601158 4:-42639752 MsG0480020508.01.T01:CDS
GAAACGAAAACCAGGTGGGA+AGG 0.608858 4:+42641335 None:intergenic
GCCGCGAAGATAAAGAGCAA+TGG 0.609204 4:-42640944 MsG0480020508.01.T01:CDS
CAGGTCAAGAGAGAGAAGCA+AGG 0.633366 4:-42640908 MsG0480020508.01.T01:CDS
AAGTAATCATATGCCACTAG+AGG 0.633670 4:-42639842 MsG0480020508.01.T01:CDS
GAACCTCCTACAACCTCTAG+TGG 0.635358 4:+42639829 None:intergenic
ACATCAATGGTGTAGAACCA+TGG 0.640791 4:-42641221 MsG0480020508.01.T01:CDS
GTTGGGAAGAAACGAAAACC+AGG 0.640908 4:+42641327 None:intergenic
TATAAAGGAAAAGCTCCAAG+TGG 0.670306 4:-42640771 MsG0480020508.01.T01:CDS
ATGCCACTAGAGGTTGTAGG+AGG 0.675101 4:-42639832 MsG0480020508.01.T01:CDS
TGCATCCTGATGAGTAGATG+TGG 0.677636 4:+42639903 None:intergenic
GGTCAAGAGAGAGAAGCAAG+GGG 0.681277 4:-42640906 MsG0480020508.01.T01:CDS
GGGAAGAAACGAAAACCAGG+TGG 0.697514 4:+42641330 None:intergenic
GGAAGAAACGAAAACCAGGT+GGG 0.702147 4:+42641331 None:intergenic
TGCAATATATACCTGAGGTG+TGG 0.718087 4:+42640683 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATCTAAATAATAAATTACA+AGG - Chr4:42639783-42639802 MsG0480020508.01.T01:CDS 10.0%
!!! AAAATTTTCAAAAACAAAAA+AGG - Chr4:42640787-42640806 MsG0480020508.01.T01:CDS 10.0%
!!! AAATCTTATTTAATCAATTA+TGG + Chr4:42640697-42640716 None:intergenic 10.0%
!!! TATACTATTGTTTTATTTAT+AGG + Chr4:42640580-42640599 None:intergenic 10.0%
!! AAACTGAAAATTAACATATA+TGG - Chr4:42640520-42640539 MsG0480020508.01.T01:intron 15.0%
!! AATAGTAACAATGAAAATAA+TGG - Chr4:42641281-42641300 MsG0480020508.01.T01:CDS 15.0%
!! TAATAATTAAGGTATACAAT+AGG - Chr4:42640430-42640449 MsG0480020508.01.T01:intron 15.0%
!! TTATATTAATGTACTTACTT+GGG + Chr4:42639875-42639894 None:intergenic 15.0%
!! TTTATATTAATGTACTTACT+TGG + Chr4:42639876-42639895 None:intergenic 15.0%
!!! AACTTTTAACTTATGTTTTT+TGG - Chr4:42640996-42641015 MsG0480020508.01.T01:intron 15.0%
!! AATCATCAAACTATGTAAAT+CGG + Chr4:42640061-42640080 None:intergenic 20.0%
!! TTGTCTATAAAAGAAAGAAA+TGG + Chr4:42639928-42639947 None:intergenic 20.0%
!!! ATTTGAAATTTCTCAATTAG+GGG - Chr4:42641193-42641212 MsG0480020508.01.T01:intron 20.0%
!!! CATTTGAAATTTCTCAATTA+GGG - Chr4:42641192-42641211 MsG0480020508.01.T01:intron 20.0%
!!! CTTGTATGAATTTCATTTTA+AGG + Chr4:42640548-42640567 None:intergenic 20.0%
!!! TAAAAAAAGTATTAACCATG+AGG + Chr4:42639994-42640013 None:intergenic 20.0%
!!! TCATTTGAAATTTCTCAATT+AGG - Chr4:42641191-42641210 MsG0480020508.01.T01:intron 20.0%
!!! TTTATAGACAAACTTTTACT+AGG - Chr4:42639937-42639956 MsG0480020508.01.T01:CDS 20.0%
! ACATAGTATGAATGACATTT+AGG - Chr4:42640718-42640737 MsG0480020508.01.T01:CDS 25.0%
! CATAGTATGAATGACATTTA+GGG - Chr4:42640719-42640738 MsG0480020508.01.T01:CDS 25.0%
! TCGTCATGATGTAATAATTA+AGG - Chr4:42640419-42640438 MsG0480020508.01.T01:intron 25.0%
!! TTTGAAATTTCTCAATTAGG+GGG - Chr4:42641194-42641213 MsG0480020508.01.T01:intron 25.0%
!! TTTTATGACCAACAAATACT+TGG - Chr4:42640603-42640622 MsG0480020508.01.T01:intron 25.0%
!!! TTTGTTGTTATCTAGCTTAA+AGG + Chr4:42640914-42640933 None:intergenic 25.0%
!!! TTTTTGGTGTTTTATAGTTG+AGG - Chr4:42641012-42641031 MsG0480020508.01.T01:intron 25.0%
AAAACCATGGTGTTCTATAA+AGG - Chr4:42640279-42640298 MsG0480020508.01.T01:intron 30.0%
AAAAGGAAAAAACAGTTGAG+AGG - Chr4:42640804-42640823 MsG0480020508.01.T01:CDS 30.0%
AATGATGCAATATATACCTG+AGG + Chr4:42640390-42640409 None:intergenic 30.0%
CTTCGGATAACAAAGTTATT+GGG - Chr4:42640250-42640269 MsG0480020508.01.T01:intron 30.0%
GAGATTGATCAAAATCCATT+TGG - Chr4:42641137-42641156 MsG0480020508.01.T01:intron 30.0%
TATTAATGTACTTACTTGGG+AGG + Chr4:42639872-42639891 None:intergenic 30.0%
TCAATTCCAAGAATCACTAT+GGG - Chr4:42641313-42641332 MsG0480020508.01.T01:CDS 30.0%
TCCTGGTTATGTTTATTCTT+CGG - Chr4:42640233-42640252 MsG0480020508.01.T01:intron 30.0%
TCTTCGGATAACAAAGTTAT+TGG - Chr4:42640249-42640268 MsG0480020508.01.T01:intron 30.0%
TTCAATTCCAAGAATCACTA+TGG - Chr4:42641312-42641331 MsG0480020508.01.T01:CDS 30.0%
TTCGGATAACAAAGTTATTG+GGG - Chr4:42640251-42640270 MsG0480020508.01.T01:intron 30.0%
! AGAAAGAGTTGATCAATTAC+GGG - Chr4:42641109-42641128 MsG0480020508.01.T01:intron 30.0%
! CAATGAAAATAATGGTGATG+AGG - Chr4:42641289-42641308 MsG0480020508.01.T01:CDS 30.0%
! CTTTTGATCCAAGTATTTGT+TGG + Chr4:42640614-42640633 None:intergenic 30.0%
! GACAAACTTTTACTAGGTTA+TGG - Chr4:42639943-42639962 MsG0480020508.01.T01:CDS 30.0%
! GAGAAAGAGTTGATCAATTA+CGG - Chr4:42641108-42641127 MsG0480020508.01.T01:intron 30.0%
! TTTTCCTTTATAGAACACCA+TGG + Chr4:42640286-42640305 None:intergenic 30.0%
AAGTAATCATATGCCACTAG+AGG - Chr4:42641223-42641242 MsG0480020508.01.T01:CDS 35.0%
ATTCCAGTCATTGACATCAA+TGG - Chr4:42639831-42639850 MsG0480020508.01.T01:CDS 35.0%
CAAGTGGAAGGAAAACAAAA+TGG - Chr4:42640310-42640329 MsG0480020508.01.T01:intron 35.0%
CCAAACAAGTGCTATAGATA+GGG - Chr4:42639806-42639825 MsG0480020508.01.T01:CDS 35.0%
CTAATAGAACTACTGCTTGT+GGG - Chr4:42640190-42640209 MsG0480020508.01.T01:intron 35.0%
CTAGTGGCATATGATTACTT+TGG + Chr4:42641223-42641242 None:intergenic 35.0%
GAGGTTCAAATAGCACAAAT+TGG - Chr4:42641252-42641271 MsG0480020508.01.T01:CDS 35.0%
GTGTCGAGTGTATGTAATAT+CGG - Chr4:42641049-42641068 MsG0480020508.01.T01:intron 35.0%
TAACAAGCTCTTCTTCAGTT+GGG + Chr4:42639758-42639777 None:intergenic 35.0%
TATAAAGGAAAAGCTCCAAG+TGG - Chr4:42640294-42640313 MsG0480020508.01.T01:intron 35.0%
TATTGGGGTGAAAAAAACCA+TGG - Chr4:42640266-42640285 MsG0480020508.01.T01:intron 35.0%
TCAACTCTTTCTCTCTCTAA+TGG + Chr4:42641101-42641120 None:intergenic 35.0%
TCCGAAGAATAAACATAACC+AGG + Chr4:42640237-42640256 None:intergenic 35.0%
TGTCGAGTGTATGTAATATC+GGG - Chr4:42641050-42641069 MsG0480020508.01.T01:intron 35.0%
! CAATGGTTTTTCTTTTCACC+AGG - Chr4:42640138-42640157 MsG0480020508.01.T01:intron 35.0%
! GAGGAGTTTTCAAATCAAGT+AGG - Chr4:42640823-42640842 MsG0480020508.01.T01:CDS 35.0%
!! GGATTGGTTAGATACTTGAA+TGG + Chr4:42640355-42640374 None:intergenic 35.0%
!! GGGACAGTGAACATTTTAAT+TGG - Chr4:42641339-42641358 MsG0480020508.01.T01:CDS 35.0%
!!! CATTTTGTTTTCCTTCCACT+TGG + Chr4:42640312-42640331 None:intergenic 35.0%
ACACCATTGATGTCAATGAC+TGG + Chr4:42639837-42639856 None:intergenic 40.0%
ACATCAATGGTGTAGAACCA+TGG - Chr4:42639844-42639863 MsG0480020508.01.T01:CDS 40.0%
ACCATTGCTCTTTATCTTCG+CGG + Chr4:42640125-42640144 None:intergenic 40.0%
CCAAGAATCACTATGGGAAT+GGG - Chr4:42641319-42641338 MsG0480020508.01.T01:CDS 40.0%
CCCTATCTATAGCACTTGTT+TGG + Chr4:42639809-42639828 None:intergenic 40.0%
CCTAATAGAACTACTGCTTG+TGG - Chr4:42640189-42640208 MsG0480020508.01.T01:intron 40.0%
CTAACAAGCTCTTCTTCAGT+TGG + Chr4:42639759-42639778 None:intergenic 40.0%
GCCAAACAAGTGCTATAGAT+AGG - Chr4:42639805-42639824 MsG0480020508.01.T01:CDS 40.0%
TATGTTCCAAGCAGACAACT+CGG + Chr4:42640035-42640054 None:intergenic 40.0%
TCCAAGAATCACTATGGGAA+TGG - Chr4:42641318-42641337 MsG0480020508.01.T01:CDS 40.0%
TGCAATATATACCTGAGGTG+TGG + Chr4:42640385-42640404 None:intergenic 40.0%
! CCACAAGCAGTAGTTCTATT+AGG + Chr4:42640192-42640211 None:intergenic 40.0%
!! ATGTGTTTTTGCAGCTCTTG+CGG - Chr4:42640089-42640108 MsG0480020508.01.T01:intron 40.0%
AAGGAAAAGCTCCAAGTGGA+AGG - Chr4:42640298-42640317 MsG0480020508.01.T01:intron 45.0%
AGGTCAAGAGAGAGAAGCAA+GGG - Chr4:42640158-42640177 MsG0480020508.01.T01:intron 45.0%
CATATGCCACTAGAGGTTGT+AGG - Chr4:42641230-42641249 MsG0480020508.01.T01:CDS 45.0%
CCCATTCCCATAGTGATTCT+TGG + Chr4:42641322-42641341 None:intergenic 45.0%
GAACTACTGCTTGTGGGTAT+TGG - Chr4:42640196-42640215 MsG0480020508.01.T01:intron 45.0%
GGAAGAAACGAAAACCAGGT+GGG + Chr4:42639737-42639756 None:intergenic 45.0%
GTTGGGAAGAAACGAAAACC+AGG + Chr4:42639741-42639760 None:intergenic 45.0%
TACTTACTTGGGAGGTTCCA+TGG + Chr4:42639864-42639883 None:intergenic 45.0%
TGAGTAGATGTGGCACCAAA+TGG + Chr4:42641155-42641174 None:intergenic 45.0%
TGCATCCTGATGAGTAGATG+TGG + Chr4:42641165-42641184 None:intergenic 45.0%
!! CAGACAACTCGGTTGATGAA+CGG + Chr4:42640024-42640043 None:intergenic 45.0%
!! TACTGCTTGTGGGTATTGGA+AGG - Chr4:42640200-42640219 MsG0480020508.01.T01:intron 45.0%
!! TGTGTTTTTGCAGCTCTTGC+GGG - Chr4:42640090-42640109 MsG0480020508.01.T01:intron 45.0%
AAGAGAGAGAAGCAAGGGGA+GGG - Chr4:42640163-42640182 MsG0480020508.01.T01:intron 50.0%
ATGCCACTAGAGGTTGTAGG+AGG - Chr4:42641233-42641252 MsG0480020508.01.T01:CDS 50.0%
ATGGAAGATACCTTCCCACC+TGG - Chr4:42639720-42639739 MsG0480020508.01.T01:CDS 50.0%
CAGGTCAAGAGAGAGAAGCA+AGG - Chr4:42640157-42640176 MsG0480020508.01.T01:intron 50.0%
CATCAACCGAGTTGTCTGCT+TGG - Chr4:42640026-42640045 MsG0480020508.01.T01:CDS 50.0%
CTTGCTTCTCTCTCTTGACC+TGG + Chr4:42640159-42640178 None:intergenic 50.0%
GAAACGAAAACCAGGTGGGA+AGG + Chr4:42639733-42639752 None:intergenic 50.0%
GAACCTCCTACAACCTCTAG+TGG + Chr4:42641239-42641258 None:intergenic 50.0%
GAGTTCGAACTCTGACCTCA+TGG - Chr4:42639976-42639995 MsG0480020508.01.T01:CDS 50.0%
GCCGCGAAGATAAAGAGCAA+TGG - Chr4:42640121-42640140 MsG0480020508.01.T01:intron 50.0%
GGGAAGAAACGAAAACCAGG+TGG + Chr4:42639738-42639757 None:intergenic 50.0%
GGTCAAGAGAGAGAAGCAAG+GGG - Chr4:42640159-42640178 MsG0480020508.01.T01:intron 50.0%
TGAGGTCAGAGTTCGAACTC+TGG + Chr4:42639976-42639995 None:intergenic 50.0%
!! TGGTGCCACATCTACTCATC+AGG - Chr4:42641157-42641176 MsG0480020508.01.T01:intron 50.0%
!! TGTGGGTATTGGAAGGCAAC+AGG - Chr4:42640207-42640226 MsG0480020508.01.T01:intron 50.0%
ATCCAACACTGCCACACCTC+AGG - Chr4:42640371-42640390 MsG0480020508.01.T01:intron 55.0%
CAAGAGAGAGAAGCAAGGGG+AGG - Chr4:42640162-42640181 MsG0480020508.01.T01:intron 55.0%
TACCTGAGGTGTGGCAGTGT+TGG + Chr4:42640376-42640395 None:intergenic 55.0%
TGGAAGGCAACAGGTTCTCC+TGG - Chr4:42640216-42640235 MsG0480020508.01.T01:intron 55.0%
! GAGGTGTGGCAGTGTTGGAT+TGG + Chr4:42640371-42640390 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr4 gene 42639720 42641367 42639720 ID=MsG0480020508.01;Name=MsG0480020508.01
Chr4 mRNA 42639720 42641367 42639720 ID=MsG0480020508.01.T01;Parent=MsG0480020508.01;Name=MsG0480020508.01.T01;_AED=0.15;_eAED=0.15;_QI=0|0|0|1|1|1|3|0|261
Chr4 exon 42641211 42641367 42641211 ID=MsG0480020508.01.T01:exon:4607;Parent=MsG0480020508.01.T01
Chr4 exon 42640695 42640984 42640695 ID=MsG0480020508.01.T01:exon:4606;Parent=MsG0480020508.01.T01
Chr4 exon 42639720 42640058 42639720 ID=MsG0480020508.01.T01:exon:4605;Parent=MsG0480020508.01.T01
Chr4 CDS 42641211 42641367 42641211 ID=MsG0480020508.01.T01:cds;Parent=MsG0480020508.01.T01
Chr4 CDS 42640695 42640984 42640695 ID=MsG0480020508.01.T01:cds;Parent=MsG0480020508.01.T01
Chr4 CDS 42639720 42640058 42639720 ID=MsG0480020508.01.T01:cds;Parent=MsG0480020508.01.T01
Gene Sequence

>MsG0480020508.01.T01

ATGGAAGATACCTTCCCACCTGGTTTTCGTTTCTTCCCAACTGAAGAAGAGCTTGTTAGCTTTTATCTAAATAATAAATTACAAGGCCAAACAAGTGCTATAGATAGGGTTATTCCAGTCATTGACATCAATGGTGTAGAACCATGGAACCTCCCAACTCTTGCGGGAGAGCTTTGCCGCGAAGATAAAGAGCAATGGTTTTTCTTTTCACCAGGTCAAGAGAGAGAAGCAAGGGGAGGGAGACCTAATAGAACTACTGCTTGTGGGTATTGGAAGGCAACAGGTTCTCCTGGTTATGTTTATTCTTCGGATAACAAAGTTATTGGGGTGAAAAAAACCATGGTGTTCTATAAAGGAAAAGCTCCAAGTGGAAGGAAAACAAAATGGAAGATGAATGAATACAGAGCCATTCAAGTATCTAACCAATCCAACACTGCCACACCTCAGTTGAGGAGAGAATTCAGTTTGTGTCGAGTGTATGTAATATCGGGAAGCTTTCGAGCATTTGATAGACGTCCATTAGAGAGAGAAAGAGTTGATCAATTACGGGTTAATGAGATTGATCAAAATCCATTTGGTGCCACATCTACTCATCAGGATGCAACAAGTTCATTTGAAATTTCTCAATTAGGGGGACTCCAAAGTAATCATATGCCACTAGAGGTTGTAGGAGGTTCAAATAGCACAAATTGGCATGTAAATAGTAACAATGAAAATAATGGTGATGAGGTTCAATTCCAAGAATCACTATGGGAATGGGACAGTGAACATTTTAATTGGTCCTAA
Protein sequence

>MsG0480020508.01.T01

MEDTFPPGFRFFPTEEELVSFYLNNKLQGQTSAIDRVIPVIDINGVEPWNLPTLAGELCREDKEQWFFFSPGQEREARGGRPNRTTACGYWKATGSPGYVYSSDNKVIGVKKTMVFYKGKAPSGRKTKWKMNEYRAIQVSNQSNTATPQLRREFSLCRVYVISGSFRAFDRRPLERERVDQLRVNEIDQNPFGATSTHQDATSSFEISQLGGLQSNHMPLEVVGGSNSTNWHVNSNNENNGDEVQFQESLWEWDSEHFNWS*